Cucsa.368410 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.368410
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMYB family protein
Locationscaffold03639 : 80696 .. 81550 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGATCGGAATCGCCCTCCCAAATCACAACAACAATACAAATTCAAACAACAATAATAATAATCATAATCGAGTTAAGGGGTCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTTGAACAGCATGGCCCCAGAAATTGGTCTTTGATCAGCACTGGAATTCCTGGTCGTTCCGGTAAGTCCTGCCGTTTGCGTTGGTGTAATCAGCTCAGTCCCACCGTTCAGCATCGTCCCTTTACTCCAGCGGAGGATGCTTTGATTCTTCAAGCGCACGCTGTTCATGGTAACAAATGGTCCACTATTGCTCGCTCGTTACCTGGCCGAACCGACAATGCGATTAAGAATCATTGGAACTCGACGCTTAGACGCCGTCGTGATGCCGACTTGTCGTCTGATTCCACGGCATTTCTGAAGCGGCCGAGTTATGAAGTTTCTAGGTCGGCGTCGGATGACGATGATAACGATGATGATGACTCGGAAGCTTCTTTGAAGCGTACGTGCTTTGACCGGAACAGCGTTGGAGGAGGAGAACCGGAGACGTCGTTGAGACTGTCGTTGCCGGGAGAGGTGGTGGTAGCGGCGGAGATGGATGTGAAAGTGAAGGAGGAGGTGACGGTGGAGAGCGAAAAGAACGACGGACGGCGACGGGTGGTAGCGGCGGCGGAGGAAGAGAAAGGGAATCGGAAAAAGGAGGTGGATGAGAGTTGTTtGGCGACGATAATGCAGAGGATGATAGCCCAGGAGGTTAGAAATTACATAGATAGTTTACGGGCACGTGGTGGGCTTGGAATTGGGCCTGGAGTTGGGCCCGGGCTGGATCCTGCAGCCCAAGAAACTCCATAG

mRNA sequence

ATGGTTTTGATCGGAATCGCCCTCCCAAATCACAACAACAATACAAATTCAAACAACAATAATAATAATCATAATCGAGTTAAGGGGTCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTTGAACAGCATGGCCCCAGAAATTGGTCTTTGATCAGCACTGGAATTCCTGGTCGTTCCGGTAAGTCCTGCCGTTTGCGTTGGTGTAATCAGCTCAGTCCCACCGTTCAGCATCGTCCCTTTACTCCAGCGGAGGATGCTTTGATTCTTCAAGCGCACGCTGTTCATGGTAACAAATGGTCCACTATTGCTCGCTCGTTACCTGGCCGAACCGACAATGCGATTAAGAATCATTGGAACTCGACGCTTAGACGCCGTCGTGATGCCGACTTGTCGTCGGCGTCGGATGACGATGATAACGATGATGATGACTCGGAAGCTTCTTTGAAGCGTACGTGCTTTGACCGGAACAGCGTTGGAGGAGGAGAACCGGAGACGTCGTTGAGACTGTCGTTGCCgggagaggtggtggtagcggcggagatggatgtgaaagtgaaggaggaggtgacggtggagagcgaaaagaacgacggacggcgacgggtggtagcggcggcggaggaagagaaagggaatcggaaaaaggaggtggatgagAGTTGTTTGGCGACGATAATGCAGAGGATGATAGCCCAGGAGGTTAGAAATTACATAGATAGTTTACGGGCACGTGGTGGGCTTGGAATTGGGCCTGGAGTTGGGCCCGGGCTGGATCCTGCAGCCCAAGAAACTCCATAG

Coding sequence (CDS)

ATGGTTTTGATCGGAATCGCCCTCCCAAATCACAACAACAATACAAATTCAAACAACAATAATAATAATCATAATCGAGTTAAGGGGTCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTTGAACAGCATGGCCCCAGAAATTGGTCTTTGATCAGCACTGGAATTCCTGGTCGTTCCGGTAAGTCCTGCCGTTTGCGTTGGTGTAATCAGCTCAGTCCCACCGTTCAGCATCGTCCCTTTACTCCAGCGGAGGATGCTTTGATTCTTCAAGCGCACGCTGTTCATGGTAACAAATGGTCCACTATTGCTCGCTCGTTACCTGGCCGAACCGACAATGCGATTAAGAATCATTGGAACTCGACGCTTAGACGCCGTCGTGATGCCGACTTGTCGTCGGCGTCGGATGACGATGATAACGATGATGATGACTCGGAAGCTTCTTTGAAGCGTACGTGCTTTGACCGGAACAGCGTTGGAGGAGGAGAACCGGAGACGTCGTTGAGACTGTCGTTGCCGGGAGAGGTGGTGGTAGCGGCGGAGATGGATGTGAAAGTGAAGGAGGAGGTGACGGTGGAGAGCGAAAAGAACGACGGACGGCGACGGGTGGTAGCGGCGGCGGAGGAAGAGAAAGGGAATCGGAAAAAGGAGGTGGATGAGAGTTGTTtGGCGACGATAATGCAGAGGATGATAGCCCAGGAGGTTAGAAATTACATAGATAGTTTACGGGCACGTGGTGGGCTTGGAATTGGGCCTGGAGTTGGGCCCGGGCTGGATCCTGCAGCCCAAGAAACTCCATAG

Protein sequence

MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSASDDDDNDDDDSEASLKRTCFDRNSVGGGEPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESCLATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP*
Homology
[Close]
BLAST of Cucsa.368410 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 80/142 (56.34%), Postives = 97/142 (68.31%), Query Frame = 1 

Query: 25  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFT 84
           +R+KG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 85  PAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSASDDDDNDD 144
             ED  I +AHA  GNKW+TIAR L GRTDNA+KNHWNSTL+R+         D    D 
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK-----CGGYDHRGYDG 122

Query: 145 DDSEASLKRTCFDRNSVGGGEP 167
            +    +KR      SV  G P
Sbjct: 123 SEDHRPVKR------SVSAGSP 133

[Close]
BLAST of Cucsa.368410 vs. Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-33
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 1 

Query: 12  NNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWC 71
           +  +  N   ++   VKG W  +EDA L++LV + GP+ WS I+  IPGR GK CR RW 
Sbjct: 261 STTSKDNGKPSSPGIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPGRIGKQCRERWF 320

Query: 72  NQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDA 131
           N LSP V+   +TP ED +I+ AHA  GNKW+ I++ L GR  NAIKNHWNSTL ++   
Sbjct: 321 NHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKIGG 380

Query: 132 D---LSSASDDDDNDDDDSE 149
           D   L+   DDDD+DD+D+E
Sbjct: 381 DSKSLNKEKDDDDDDDEDAE 400

[Close]
BLAST of Cucsa.368410 vs. Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.9e-29
Identity = 54/113 (47.79%), Postives = 81/113 (71.68%), Query Frame = 1 

Query: 23  NHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRP 82
           N   VKG WS +ED T+I LVE++GP+ WS IS  +PGR GK CR RW N L+P +    
Sbjct: 82  NPELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHLNPGINKNA 141

Query: 83  FTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSS 136
           +T  E+  +++AH ++GNKW+ + + LPGR+DN+IKNHWNS+++++ D+  +S
Sbjct: 142 WTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYAS 194


HSP 2 Score: 70.1 bits (170), Expect = 4.2e-11
Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 1 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG W+P+ED  L K VE+   +NW  I+     R+   C  RW   L+P +   P++  E
Sbjct: 35  KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEE 94

Query: 88  DALILQAHAVHG-NKWSTIARSLPGRTDNAIKNHWNSTL 126
           D  I+     +G  KWSTI++ LPGR     +  W++ L
Sbjct: 95  DNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL 133

[Close]
BLAST of Cucsa.368410 vs. Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 23  NHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRP 82
           N   +KG W+  ED  +IKLV   GP+ W+LI+  + GR GK CR RW N L+P ++   
Sbjct: 131 NPELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTA 190

Query: 83  FTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSAS 138
           +T  ED +I QAH   GN+W+ IA+ LPGRTDNAIKNHWNST+RR+ D +  S +
Sbjct: 191 WTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVN 245

[Close]
BLAST of Cucsa.368410 vs. Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 56/106 (52.83%), Postives = 78/106 (73.58%), Query Frame = 1 

Query: 23  NHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRP 82
           N   +KG W+ +ED  +I+LV+++GP+ WSLI+  + GR GK CR RW N L+P V+   
Sbjct: 82  NPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSS 141

Query: 83  FTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           +T AED +I +AH   GN+W+ IA+ LPGRTDN+IKNHWNST+RR+
Sbjct: 142 WTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187

[Close]
BLAST of Cucsa.368410 vs. TrEMBL
Match: A0A0A0KQJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.4e-149
Identity = 268/284 (94.37%), Postives = 268/284 (94.37%), Query Frame = 1 

Query: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60
           MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADLS----------------SASDDDDNDDDDSEASLKRTCFDRNSVGGG 180
           WNSTLRRRRDADLS                SASDDDDNDDDDSEASLKRTCFDRNSVGGG
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCFDRNSVGGG 180

Query: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC 240
           EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC
Sbjct: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC 240

Query: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP 269
           LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP
Sbjct: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP 284

[Close]
BLAST of Cucsa.368410 vs. TrEMBL
Match: V4T705_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.0e-76
Identity = 157/277 (56.68%), Postives = 193/277 (69.68%), Query Frame = 1 

Query: 2   VLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGR 61
           ++I     +  NN ++N+N+NN++R+KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGR
Sbjct: 1   MMISTTSSSSMNNNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGR 60

Query: 62  SGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHW 121
           SGKSCRLRWCNQLSPTVQHRPFTPAED++I+QAHAVHGNKW+TIARSLPGRTDNAIKNHW
Sbjct: 61  SGKSCRLRWCNQLSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHW 120

Query: 122 NSTLRRRRDADLSSASDDDDN---------------DDDDSEASLKRTCF------DRNS 181
           NSTLRR+R A+LSSAS + ++               + D     +KR C       D  +
Sbjct: 121 NSTLRRKRMAELSSASSESNSVMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYN 180

Query: 182 VGGG--EPETSLRLSLPGE-VVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRK 241
           V  G   PET L LS PGE VV+      KV++E  ++  K           E+EKG  +
Sbjct: 181 VEAGIVGPETLLTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDR 240

Query: 242 ----KEVDESCLATIMQRMIAQEVRNYIDSLRARGGL 251
                E++ESCL TIM+RMIA+EVRN  D LRA+ GL
Sbjct: 241 CTVDMEMEESCLFTIMRRMIAEEVRNQFDGLRAQAGL 277

[Close]
BLAST of Cucsa.368410 vs. TrEMBL
Match: A0A067LKB3_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.9e-75
Identity = 154/256 (60.16%), Postives = 181/256 (70.70%), Query Frame = 1 

Query: 25  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFT 84
           +R+KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPF+
Sbjct: 10  DRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHRPFS 69

Query: 85  PAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSASDD----- 144
           PAEDA+I+QAHA+HGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+LSSAS +     
Sbjct: 70  PAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSEANSVM 129

Query: 145 -----DDNDDDDSEASLKRTC---------FDRNSVGGGEPETSLRLSLPGEVVVAAEMD 204
                D + +  SE+ +KR C         FD    G  EPETSL LS PG+  V  E+ 
Sbjct: 130 KRPCLDVSTESGSESGVKRQCLGAPPEDSSFD-GEAGIVEPETSLTLSPPGDGFVRTEVG 189

Query: 205 VKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESCLATIMQRMIAQEVRNYIDSLR 262
            KVKE      E++  R+ V    EEE+     +++E+CL TIMQRMIA EVR+YID LR
Sbjct: 190 EKVKEVAVKGGEQDVDRQMVGEEEEEEEETCGLQIEETCLLTIMQRMIATEVRSYIDRLR 249

[Close]
BLAST of Cucsa.368410 vs. TrEMBL
Match: A0A067FND1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046570mg PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 9.6e-71
Identity = 148/253 (58.50%), Postives = 181/253 (71.54%), Query Frame = 1 

Query: 17  SNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 76
           +N+N+NN++R+KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGRSGKSCRLRWCNQLSP
Sbjct: 1   TNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQLSP 60

Query: 77  TVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSA 136
           TVQHRPFTPAED++I+QAHAVHGNKW+TIARSLPGRTDNAIKNHWNSTLRR+R A+LSSA
Sbjct: 61  TVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAELSSA 120

Query: 137 SDDDDNDDDDSEASLKRTCFDRN-------SVGGGEPETSLRLSLPGEV------VVAAE 196
           S + ++        +KR  F+ N       S  GG     LR+S   +       +V  E
Sbjct: 121 SSESNS------VMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPE 180

Query: 197 M--DVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRK----KEVDESCLATIMQRMIAQEV 251
                KV++E  ++  K           E+EKG  +     E++ESCL TIM+RMIA+EV
Sbjct: 181 TFGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDRCTVDMEMEESCLFTIMRRMIAEEV 240

[Close]
BLAST of Cucsa.368410 vs. TrEMBL
Match: B9SQP6_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0838620 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-70
Identity = 153/263 (58.17%), Postives = 175/263 (66.54%), Query Frame = 1 

Query: 17  SNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 76
           S    ++  R+KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP
Sbjct: 5   SGGGRSSSERIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 64

Query: 77  TVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSA 136
            VQHRPFTP EDA+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+ SSA
Sbjct: 65  EVQHRPFTPDEDAVIVQAHAVHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRIAEFSSA 124

Query: 137 SD-----------DDDNDDD-----DSEASLKRTCF------DRNSVGGG-----EPETS 196
           S            D D++ D     DS A+ KR C       + +S  GG     EPET 
Sbjct: 125 SSESNSAIKRLSLDGDSESDSESGSDSAAAAKRQCLGGSGCTEDSSFNGGDAKVVEPETL 184

Query: 197 LRLSLPGEVVVAAEMDVKVK---EEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESCLA 250
           L LS PG+  V A   +  K   EE  VE  K  G          + G   +E +ESCL 
Sbjct: 185 LTLSPPGDGFVTAAAAIGEKTEEEEEEVEVVKGGG----------DNGRLVREEEESCLL 244

[Close]
BLAST of Cucsa.368410 vs. TAIR10
Match: AT4G37260.1 (AT4G37260.1 myb domain protein 73)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-44
Identity = 92/163 (56.44%), Postives = 110/163 (67.48%), Query Frame = 1 

Query: 17  SNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 76
           SN    N  R+KG WSP+ED  L +LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP
Sbjct: 2   SNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 77  TVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSA 136
            V+HR F+  ED  I++AHA  GNKW+TI+R L GRTDNAIKNHWNSTL+R+   +  S 
Sbjct: 62  EVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSC 121

Query: 137 SDDDDNDDDDS---EASLKRTCFDRNSVGGGEPETSLRLSLPG 177
               +   D +   E  LKRT     + GGG   T L +S PG
Sbjct: 122 DFGGNGGYDGNLGEEQPLKRT-----ASGGGGVSTGLYMS-PG 158

[Close]
BLAST of Cucsa.368410 vs. TAIR10
Match: AT3G50060.1 (AT3G50060.1 myb domain protein 77)

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-42
Identity = 77/133 (57.89%), Postives = 96/133 (72.18%), Query Frame = 1 

Query: 25  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFT 84
           +RVKG WS +ED  L ++VE++GPRNWS IS  IPGRSGKSCRLRWCNQLSP V+HRPF+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 85  PAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSASDDDDNDD 144
           P ED  I+ A A  GNKW+TIAR L GRTDNA+KNHWNSTL+R+    ++  +  +  +D
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVTETEED 122

Query: 145 DDSEASLKRTCFD 158
            D     +   FD
Sbjct: 123 QDRPKKRRSVSFD 135

[Close]
BLAST of Cucsa.368410 vs. TAIR10
Match: AT2G23290.1 (AT2G23290.1 myb domain protein 70)

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-42
Identity = 85/153 (55.56%), Postives = 101/153 (66.01%), Query Frame = 1 

Query: 17  SNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 76
           S +     +R+KG WSP+ED  L  LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP
Sbjct: 2   SGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 77  TVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR-----RDA 136
            V+HR FT  ED  I+ AHA  GNKW+TIAR L GRTDNAIKNHWNSTL+R+        
Sbjct: 62  EVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGGG 121

Query: 137 DLSSASDDDDNDDDDSEASLKRTCFDRNSVGGG 165
           +   + D   N   D   + ++    R S GGG
Sbjct: 122 EEGQSCDFGGNGGYDGNLTDEKPLKRRASGGGG 154

[Close]
BLAST of Cucsa.368410 vs. TAIR10
Match: AT3G55730.1 (AT3G55730.1 myb domain protein 109)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-41
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 1 

Query: 25  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFT 84
           ++VKG WS +EDA L KLV + GPRNWSLI+ GIPGRSGKSCRLRWCNQL P ++ +PF+
Sbjct: 53  SKVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFS 112

Query: 85  PAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADL----------- 144
             ED +I+ AHAVHGNKW+ IA+ L GRTDNAIKNHWNSTLRR+  ADL           
Sbjct: 113 DEEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKY-ADLWNNGQWMANSV 172

Query: 145 SSASDDDDNDDDDSEASLKRTCFDRNSVGGGEPE 168
           ++AS  ++N D+ +     +    +  +    P+
Sbjct: 173 TTASVKNENVDETTNPPSSKQQLPQGDINSSPPK 205

[Close]
BLAST of Cucsa.368410 vs. TAIR10
Match: AT5G67300.1 (AT5G67300.1 myb domain protein r1)

HSP 1 Score: 164.5 bits (415), Expect = 9.2e-41
Identity = 80/142 (56.34%), Postives = 97/142 (68.31%), Query Frame = 1 

Query: 25  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFT 84
           +R+KG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 85  PAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSASDDDDNDD 144
             ED  I +AHA  GNKW+TIAR L GRTDNA+KNHWNSTL+R+         D    D 
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK-----CGGYDHRGYDG 122

Query: 145 DDSEASLKRTCFDRNSVGGGEP 167
            +    +KR      SV  G P
Sbjct: 123 SEDHRPVKR------SVSAGSP 133

[Close]
BLAST of Cucsa.368410 vs. NCBI nr
Match: gi|449460939|ref|XP_004148201.1| (PREDICTED: transcription factor MYB44-like [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 1.9e-149
Identity = 268/284 (94.37%), Postives = 268/284 (94.37%), Query Frame = 1 

Query: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60
           MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADLS----------------SASDDDDNDDDDSEASLKRTCFDRNSVGGG 180
           WNSTLRRRRDADLS                SASDDDDNDDDDSEASLKRTCFDRNSVGGG
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCFDRNSVGGG 180

Query: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC 240
           EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC
Sbjct: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC 240

Query: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP 269
           LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP
Sbjct: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP 284

[Close]
BLAST of Cucsa.368410 vs. NCBI nr
Match: gi|567886500|ref|XP_006435772.1| (hypothetical protein CICLE_v10032317mg [Citrus clementina])

HSP 1 Score: 293.9 bits (751), Expect = 2.9e-76
Identity = 157/277 (56.68%), Postives = 193/277 (69.68%), Query Frame = 1 

Query: 2   VLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGR 61
           ++I     +  NN ++N+N+NN++R+KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGR
Sbjct: 1   MMISTTSSSSMNNNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGR 60

Query: 62  SGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHW 121
           SGKSCRLRWCNQLSPTVQHRPFTPAED++I+QAHAVHGNKW+TIARSLPGRTDNAIKNHW
Sbjct: 61  SGKSCRLRWCNQLSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHW 120

Query: 122 NSTLRRRRDADLSSASDDDDN---------------DDDDSEASLKRTCF------DRNS 181
           NSTLRR+R A+LSSAS + ++               + D     +KR C       D  +
Sbjct: 121 NSTLRRKRMAELSSASSESNSVMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYN 180

Query: 182 VGGG--EPETSLRLSLPGE-VVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRK 241
           V  G   PET L LS PGE VV+      KV++E  ++  K           E+EKG  +
Sbjct: 181 VEAGIVGPETLLTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDR 240

Query: 242 ----KEVDESCLATIMQRMIAQEVRNYIDSLRARGGL 251
                E++ESCL TIM+RMIA+EVRN  D LRA+ GL
Sbjct: 241 CTVDMEMEESCLFTIMRRMIAEEVRNQFDGLRAQAGL 277

[Close]
BLAST of Cucsa.368410 vs. NCBI nr
Match: gi|802547651|ref|XP_012090668.1| (PREDICTED: transcriptional activator Myb-like [Jatropha curcas])

HSP 1 Score: 290.0 bits (741), Expect = 4.1e-75
Identity = 154/256 (60.16%), Postives = 181/256 (70.70%), Query Frame = 1 

Query: 25  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFT 84
           +R+KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPF+
Sbjct: 10  DRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHRPFS 69

Query: 85  PAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSASDD----- 144
           PAEDA+I+QAHA+HGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+LSSAS +     
Sbjct: 70  PAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSEANSVM 129

Query: 145 -----DDNDDDDSEASLKRTC---------FDRNSVGGGEPETSLRLSLPGEVVVAAEMD 204
                D + +  SE+ +KR C         FD    G  EPETSL LS PG+  V  E+ 
Sbjct: 130 KRPCLDVSTESGSESGVKRQCLGAPPEDSSFD-GEAGIVEPETSLTLSPPGDGFVRTEVG 189

Query: 205 VKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESCLATIMQRMIAQEVRNYIDSLR 262
            KVKE      E++  R+ V    EEE+     +++E+CL TIMQRMIA EVR+YID LR
Sbjct: 190 EKVKEVAVKGGEQDVDRQMVGEEEEEEEETCGLQIEETCLLTIMQRMIATEVRSYIDRLR 249

[Close]
BLAST of Cucsa.368410 vs. NCBI nr
Match: gi|641850046|gb|KDO68919.1| (hypothetical protein CISIN_1g046570mg, partial [Citrus sinensis])

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 148/253 (58.50%), Postives = 181/253 (71.54%), Query Frame = 1 

Query: 17  SNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 76
           +N+N+NN++R+KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGRSGKSCRLRWCNQLSP
Sbjct: 1   TNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQLSP 60

Query: 77  TVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSA 136
           TVQHRPFTPAED++I+QAHAVHGNKW+TIARSLPGRTDNAIKNHWNSTLRR+R A+LSSA
Sbjct: 61  TVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAELSSA 120

Query: 137 SDDDDNDDDDSEASLKRTCFDRN-------SVGGGEPETSLRLSLPGEV------VVAAE 196
           S + ++        +KR  F+ N       S  GG     LR+S   +       +V  E
Sbjct: 121 SSESNS------VMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPE 180

Query: 197 M--DVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRK----KEVDESCLATIMQRMIAQEV 251
                KV++E  ++  K           E+EKG  +     E++ESCL TIM+RMIA+EV
Sbjct: 181 TFGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDRCTVDMEMEESCLFTIMRRMIAEEV 240

[Close]
BLAST of Cucsa.368410 vs. NCBI nr
Match: gi|255574816|ref|XP_002528315.1| (PREDICTED: myb-related protein 340 [Ricinus communis])

HSP 1 Score: 274.2 bits (700), Expect = 2.3e-70
Identity = 153/263 (58.17%), Postives = 175/263 (66.54%), Query Frame = 1 

Query: 17  SNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 76
           S    ++  R+KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP
Sbjct: 5   SGGGRSSSERIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP 64

Query: 77  TVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSA 136
            VQHRPFTP EDA+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+ SSA
Sbjct: 65  EVQHRPFTPDEDAVIVQAHAVHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRIAEFSSA 124

Query: 137 SD-----------DDDNDDD-----DSEASLKRTCF------DRNSVGGG-----EPETS 196
           S            D D++ D     DS A+ KR C       + +S  GG     EPET 
Sbjct: 125 SSESNSAIKRLSLDGDSESDSESGSDSAAAAKRQCLGGSGCTEDSSFNGGDAKVVEPETL 184

Query: 197 LRLSLPGEVVVAAEMDVKVK---EEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESCLA 250
           L LS PG+  V A   +  K   EE  VE  K  G          + G   +E +ESCL 
Sbjct: 185 LTLSPPGDGFVTAAAAIGEKTEEEEEEVEVVKGGG----------DNGRLVREEEESCLL 244

The following BLAST results are available for this feature:
BLAST of Cucsa.368410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB44_ARATH1.6e-3956.34Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYBQ_DICDI3.9e-3348.57Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1[more]
MB3R1_ARATH5.9e-2947.79Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1[more]
MYB_DROME1.0e-2850.43Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2[more]
MYBA_CHICK1.0e-2852.83Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1[more]
BLAST of Cucsa.368410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQJ2_CUCSA1.4e-14994.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1[more]
V4T705_9ROSI2.0e-7656.68Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1[more]
A0A067LKB3_JATCU2.9e-7560.16MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1[more]
A0A067FND1_CITSI9.6e-7158.50Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046570mg PE=4 S... [more]
B9SQP6_RICCO1.6e-7058.17R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0838620 PE=4... [more]
BLAST of Cucsa.368410 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37260.11.4e-4456.44 myb domain protein 73[more]
AT3G50060.12.9e-4257.89 myb domain protein 77[more]
AT2G23290.14.9e-4255.56 myb domain protein 70[more]
AT3G55730.11.9e-4152.60 myb domain protein 109[more]
AT5G67300.19.2e-4156.34 myb domain protein r1[more]
BLAST of Cucsa.368410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460939|ref|XP_004148201.1|1.9e-14994.37PREDICTED: transcription factor MYB44-like [Cucumis sativus][more]
gi|567886500|ref|XP_006435772.1|2.9e-7656.68hypothetical protein CICLE_v10032317mg [Citrus clementina][more]
gi|802547651|ref|XP_012090668.1|4.1e-7560.16PREDICTED: transcriptional activator Myb-like [Jatropha curcas][more]
gi|641850046|gb|KDO68919.1|1.4e-7058.50hypothetical protein CISIN_1g046570mg, partial [Citrus sinensis][more]
gi|255574816|ref|XP_002528315.1|2.3e-7058.17PREDICTED: myb-related protein 340 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.368410.1Cucsa.368410.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 28..73
score: 1.7E-18coord: 82..124
score: 1.2
IPR001005SANT/Myb domainSMARTSM00717santcoord: 79..127
score: 1.3E-14coord: 27..76
score: 5.6
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 29..81
score: 4.6E-25coord: 82..128
score: 2.3
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 25..121
score: 9.73
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 79..129
score: 21.468coord: 23..78
score: 26
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 152..185
score: 1.1E-81coord: 1..128
score: 1.1
NoneNo IPR availablePANTHERPTHR10641:SF553SUBFAMILY NOT NAMEDcoord: 1..128
score: 1.1E-81coord: 152..185
score: 1.1