Cp4.1LG01g05420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g05420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMyb transcription factor
LocationCp4.1LG01 : 698077 .. 698922 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTAATCGGAATTCCCCTCTCAAATCGAACCAGCAACAGTAACAGTAATCGAATTAAAGGATCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTGGAGGAACACGGCCCGAGAAATTGGTCTTTGATCAGTACAGGAATTCCTGGTCGCTCTGGCAAGTCCTGCCGTTTGCGCTGGTGTAATCAGCTCAGTCCGGCGGTTCAGCACCGTCCGTTCACGCCGGCGGAGGACTCTCTGATTGTTCAGGCGCACGCCGTCCACGGTAACAAGTGGTCCACGATTGCTCGCCTCTTGCCTGGTCGGACCGACAATGCGATTAAGAATCACTGGAACTCGACGCTCAGGCGCCGCCGCGATGCCGATTTTTCTTCCGATTCCACGGCGTTTATGAAGCGGCCGAGTTGTGAAGTTTCCAGATCGGCGTCGGATGATGATGATTCGGAAGGATCGTTCAAACGGAGGTGCTTTGGAATGGCTGTGGAGCGGAACGGCGGCGGAGAAGGAGAAGGACCGGAGACGTCGCTGAGGCTGTCATTGCCCGGGGAGGTGGTGGTGCCGGCGGCGTGTGTCAAGGTGAAAGAGGAGGTGACAGTGGATAGCGAGGAGAACGATGGACGGCGTCATGTGACGGTGGCGGCGACGGCGACGGCGACGGCGGAGGAGAAAGGGAACCGGAAAAGGGAAATGGACGAGAGTTGTATGGCAACGATAATGCAGAGGATGATTGCTCGGGAGGTCCGAAATTACATAGACAGTTTACGGGCCCATGGTGGGCTTTCAATTGGGCCTAATATTGGGCCTGGGCTGGATTCAGGAGTCCAAGATACTGAGTAA

mRNA sequence

ATGGTTCTAATCGGAATTCCCCTCTCAAATCGAACCAGCAACAGTAACAGTAATCGAATTAAAGGATCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTGGAGGAACACGGCCCGAGAAATTGGTCTTTGATCAGTACAGGAATTCCTGGTCGCTCTGGCAAGTCCTGCCGTTTGCGCTGGTGTAATCAGCTCAGTCCGGCGGTTCAGCACCGTCCGTTCACGCCGGCGGAGGACTCTCTGATTGTTCAGGCGCACGCCGTCCACGGTAACAAGTGGTCCACGATTGCTCGCCTCTTGCCTGGTCGGACCGACAATGCGATTAAGAATCACTGGAACTCGACGCTCAGGCGCCGCCGCGATGCCGATTTTTCTTCCGATTCCACGGCGTTTATGAAGCGGCCGAGTTGTGAAGTTTCCAGATCGGCGTCGGATGATGATGATTCGGAAGGATCGTTCAAACGGAGGTGCTTTGGAATGGCTGTGGAGCGGAACGGCGGCGGAGAAGGAGAAGGACCGGAGACGTCGCTGAGGCTGTCATTGCCCGGGGAGGTGGTGGTGCCGGCGGCGTGTGTCAAGGTGAAAGAGGAGGTGACAGTGGATAGCGAGGAGAACGATGGACGGCGTCATGTGACGGTGGCGGCGACGGCGACGGCGACGGCGGAGGAGAAAGGGAACCGGAAAAGGGAAATGGACGAGAGTTGTATGGCAACGATAATGCAGAGGATGATTGCTCGGGAGGTCCGAAATTACATAGACAGTTTACGGGCCCATGGTGGGCTTTCAATTGGGCCTAATATTGGGCCTGGGCTGGATTCAGGAGTCCAAGATACTGAGTAA

Coding sequence (CDS)

ATGGTTCTAATCGGAATTCCCCTCTCAAATCGAACCAGCAACAGTAACAGTAATCGAATTAAAGGATCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTGGAGGAACACGGCCCGAGAAATTGGTCTTTGATCAGTACAGGAATTCCTGGTCGCTCTGGCAAGTCCTGCCGTTTGCGCTGGTGTAATCAGCTCAGTCCGGCGGTTCAGCACCGTCCGTTCACGCCGGCGGAGGACTCTCTGATTGTTCAGGCGCACGCCGTCCACGGTAACAAGTGGTCCACGATTGCTCGCCTCTTGCCTGGTCGGACCGACAATGCGATTAAGAATCACTGGAACTCGACGCTCAGGCGCCGCCGCGATGCCGATTTTTCTTCCGATTCCACGGCGTTTATGAAGCGGCCGAGTTGTGAAGTTTCCAGATCGGCGTCGGATGATGATGATTCGGAAGGATCGTTCAAACGGAGGTGCTTTGGAATGGCTGTGGAGCGGAACGGCGGCGGAGAAGGAGAAGGACCGGAGACGTCGCTGAGGCTGTCATTGCCCGGGGAGGTGGTGGTGCCGGCGGCGTGTGTCAAGGTGAAAGAGGAGGTGACAGTGGATAGCGAGGAGAACGATGGACGGCGTCATGTGACGGTGGCGGCGACGGCGACGGCGACGGCGGAGGAGAAAGGGAACCGGAAAAGGGAAATGGACGAGAGTTGTATGGCAACGATAATGCAGAGGATGATTGCTCGGGAGGTCCGAAATTACATAGACAGTTTACGGGCCCATGGTGGGCTTTCAATTGGGCCTAATATTGGGCCTGGGCTGGATTCAGGAGTCCAAGATACTGAGTAA

Protein sequence

MVLIGIPLSNRTSNSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDSTAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVERNGGGEGEGPETSLRLSLPGEVVVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQRMIAREVRNYIDSLRAHGGLSIGPNIGPGLDSGVQDTE
Homology
[Close]
BLAST of Cp4.1LG01g05420 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.0e-41
Identity = 74/105 (70.48%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 17  SNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPF 76
           ++RIKG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF
Sbjct: 2   ADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPF 61

Query: 77  TPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +  ED  I +AHA  GNKW+TIARLL GRTDNA+KNHWNSTL+R+
Sbjct: 62  SAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cp4.1LG01g05420 vs. Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 53/113 (46.90%), Postives = 82/113 (72.57%), Query Frame = 1 

Query: 16  NSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   +KG WS +ED T+I LVE++GP+ WS IS  +PGR GK CR RW N L+P +    
Sbjct: 82  NPELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHLNPGINKNA 141

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSS 129
           +T  E+  +++AH ++GNKW+ + + LPGR+DN+IKNHWNS+++++ D+ ++S
Sbjct: 142 WTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYAS 194

[Close]
BLAST of Cp4.1LG01g05420 vs. Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1 

Query: 16  NSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   IKG W+ +ED  +I+LV+++GP+ WSLI+  + GR GK CR RW N L+P V+   
Sbjct: 82  NPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSS 141

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +T AED +I +AH   GN+W+ IA+LLPGRTDN+IKNHWNST+RR+
Sbjct: 142 WTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187

[Close]
BLAST of Cp4.1LG01g05420 vs. Swiss-Prot
Match: MYB_MOUSE (Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 7.2e-30
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1 

Query: 16  NSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   IKG W+ +ED  +I+LV+++GP+ WS+I+  + GR GK CR RW N L+P V+   
Sbjct: 87  NPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +T  ED +I QAH   GN+W+ IA+LLPGRTDNAIKNHWNST+RR+
Sbjct: 147 WTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192

[Close]
BLAST of Cp4.1LG01g05420 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.2e-30
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1 

Query: 16  NSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   IKG W+ +ED  +I+LV+++GP+ WS+I+  + GR GK CR RW N L+P V+   
Sbjct: 87  NPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +T  ED +I QAH   GN+W+ IA+LLPGRTDNAIKNHWNST+RR+
Sbjct: 147 WTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192

[Close]
BLAST of Cp4.1LG01g05420 vs. TrEMBL
Match: A0A0A0KQJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.5e-116
Identity = 227/293 (77.47%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 1   MVLIGIPLSNRTSNSNSN-------RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPG 60
           MVLIGI L N  +N+NSN       R+KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSP VQHRPFTPAED+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADFSSDSTAFMKRPSCEVSRSAS-----DDDDSEGSFKRRCFGMAVERNG 180
           WNSTLRRRRDAD SSDSTAF+KRPS EVSRSAS     DDDDSE S KR CF    +RN 
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCF----DRNS 180

Query: 181 GGEGEGPETSLRLSLPGEVVVPAAC-VKVKEEVTVDSEENDGRRHVTVAATATATAEEKG 240
            G GE PETSLRLSLPGEVVV A   VKVKEEVTV+SE+NDGRR V  AA      EEKG
Sbjct: 181 VGGGE-PETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAA-----EEEKG 240

Query: 241 NRKREMDESCMATIMQRMIAREVRNYIDSLRAHGGLSIGPNIGPGLDSGVQDT 281
           NRK+E+DESC+ATIMQRMIA+EVRNYIDSLRA GGL IGP +GPGLD   Q+T
Sbjct: 241 NRKKEVDESCLATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQET 283

[Close]
BLAST of Cp4.1LG01g05420 vs. TrEMBL
Match: V4T705_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-73
Identity = 158/273 (57.88%), Postives = 191/273 (69.96%), Query Frame = 1 

Query: 8   LSNRTSNSNSN---RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWC 67
           ++N ++NSNSN   RIKGSWSPQEDATLIKLVE+HGPRNWS+IS+GIPGRSGKSCRLRWC
Sbjct: 11  MNNNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWC 70

Query: 68  NQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDA 127
           NQLSP VQHRPFTPAEDS+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A
Sbjct: 71  NQLSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMA 130

Query: 128 DFSSDS----TAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVER---NGGGEGEGPET 187
           + SS S    +  MKRP  E + S+++ D   G  KR+C  ++ E    N      GPET
Sbjct: 131 ELSSASSESNSVMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPET 190

Query: 188 SLRLSLPGEVVVPAAC----VKVKEEVTVDSE---ENDGRRHVTVAATATATAEEKGNRK 247
            L LS PGE VV        V+ +E++ ++ E   + DG +            E++    
Sbjct: 191 LLTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGK------IEKEKGEDRCTVD 250

Query: 248 REMDESCMATIMQRMIAREVRNYIDSLRAHGGL 264
            EM+ESC+ TIM+RMIA EVRN  D LRA  GL
Sbjct: 251 MEMEESCLFTIMRRMIAEEVRNQFDGLRAQAGL 277

[Close]
BLAST of Cp4.1LG01g05420 vs. TrEMBL
Match: A0A067LKB3_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.9e-72
Identity = 154/263 (58.56%), Postives = 185/263 (70.34%), Query Frame = 1 

Query: 13  SNSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQ 72
           S   ++RIKGSWSPQEDA LIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQ
Sbjct: 5   SGCGADRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQ 64

Query: 73  HRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF---SSD 132
           HRPF+PAED++IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+    SS+
Sbjct: 65  HRPFSPAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSE 124

Query: 133 STAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVERNGGGEGEG----PETSLRLSLPG 192
           + + MKRP  +V    S +  SE   KR+C G A   +   +GE     PETSL LS PG
Sbjct: 125 ANSVMKRPCLDV----STESGSESGVKRQCLG-APPEDSSFDGEAGIVEPETSLTLSPPG 184

Query: 193 EVVVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQRM 252
           +  V     +  +EV V   E D  R +          EE+     +++E+C+ TIMQRM
Sbjct: 185 DGFVRTEVGEKVKEVAVKGGEQDVDRQM----VGEEEEEEEETCGLQIEETCLLTIMQRM 244

Query: 253 IAREVRNYIDSLRAHGGLSIGPN 269
           IA EVR+YID LR+  G + GPN
Sbjct: 245 IATEVRSYIDRLRSKNGFA-GPN 257

[Close]
BLAST of Cp4.1LG01g05420 vs. TrEMBL
Match: B9HHT0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07100g PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.8e-70
Identity = 153/259 (59.07%), Postives = 181/259 (69.88%), Query Frame = 1 

Query: 14  NSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQH 73
           N   +RIKGSWSPQEDATLIKLVE+HGPRNWS+ISTGIPGRSGKSCRLRWCNQLSP VQH
Sbjct: 5   NGGDHRIKGSWSPQEDATLIKLVEQHGPRNWSMISTGIPGRSGKSCRLRWCNQLSPEVQH 64

Query: 74  RPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRD--ADFSSDST 133
           RPFTPAED+ IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R   +  SS+S 
Sbjct: 65  RPFTPAEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSSASSESN 124

Query: 134 AFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVERN--GGGEG-EGPETSLRLSLPGE-V 193
           +  KR + EVS  +  + DS GS KR+C   +   N   G  G +GPETSL LS PG+  
Sbjct: 125 SVFKRSTLEVSVVSESESDS-GS-KRQCLHASPGHNSVNGDVGVDGPETSLTLSPPGDGF 184

Query: 194 VVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQRMIA 253
           V  A   K+KE V V+  E D    +   A       EK     EMDE C+  ++Q++I 
Sbjct: 185 VSMAVAEKLKEGVAVNGREKDLGESIMKDA-------EKIRCTEEMDEDCVRALIQKIIQ 244

Query: 254 REVRNYIDSLRAHGGLSIG 267
            EVR Y D L+   G++IG
Sbjct: 245 EEVRIYFDRLKTRNGVTIG 254

[Close]
BLAST of Cp4.1LG01g05420 vs. TrEMBL
Match: A0A067FND1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046570mg PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-69
Identity = 152/259 (58.69%), Postives = 178/259 (68.73%), Query Frame = 1 

Query: 13  SNSNSN-RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAV 72
           SNSN+N RIKGSWSPQEDATLIKLVE+HGPRNWS+IS+GIPGRSGKSCRLRWCNQLSP V
Sbjct: 3   SNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQLSPTV 62

Query: 73  QHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDS- 132
           QHRPFTPAEDS+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+ SS S 
Sbjct: 63  QHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAELSSASS 122

Query: 133 ---TAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVER---NGGGEGEGPETSLRLSLP 192
              +  MKRP  E + S+++ D   G  KR+C  ++ E    N      GPET       
Sbjct: 123 ESNSVMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPET-----FG 182

Query: 193 GEVVVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQR 252
           GE V     +K+ +E   D    DG +            E++     EM+ESC+ TIM+R
Sbjct: 183 GEKVEDEEKLKINKECDGD---GDGGK------IEKEKGEDRCTVDMEMEESCLFTIMRR 242

Query: 253 MIAREVRNYIDSLRAHGGL 264
           MIA EVRN  D LRA  GL
Sbjct: 243 MIAEEVRNQFDGLRAQAGL 247

[Close]
BLAST of Cp4.1LG01g05420 vs. TAIR10
Match: AT2G23290.1 (AT2G23290.1 myb domain protein 70)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 117/282 (41.49%), Postives = 147/282 (52.13%), Query Frame = 1 

Query: 12  TSNSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAV 71
           ++    +RIKG WSP+ED  L  LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP V
Sbjct: 4   STRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEV 63

Query: 72  QHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDST 131
           +HR FT  ED  I+ AHA  GNKW+TIARLL GRTDNAIKNHWNSTL+R+     S    
Sbjct: 64  EHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK----CSGGGG 123

Query: 132 AFMKRPSCEVSRSASDDDD--SEGSFKRRCFG-------MAVERNGGGEGEGPETS---L 191
              +  SC+   +   D +   E   KRR  G        A+   G    E  ++S   L
Sbjct: 124 GGEEGQSCDFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVL 183

Query: 192 RLSLPGEVVVPAACV--KVKEEVTVDSEENDG-----------RRHVTVAATATATAEEK 251
            +S    V  P A     V E  + + EE D                T         EE+
Sbjct: 184 PVSSSCHVFKPTARAGGVVIESSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEE 243

Query: 252 GNRKREMD--ESCMATIMQRMIAREVRNYIDSLRAHGGLSIG 267
             ++RE+        T++Q MI  EVR+Y+  L+   G   G
Sbjct: 244 EEKEREISGLGGDFMTVVQEMIKTEVRSYMADLQLGNGGGAG 281

[Close]
BLAST of Cp4.1LG01g05420 vs. TAIR10
Match: AT4G37260.1 (AT4G37260.1 myb domain protein 73)

HSP 1 Score: 171.4 bits (433), Expect = 7.9e-43
Identity = 100/215 (46.51%), Postives = 126/215 (58.60%), Query Frame = 1 

Query: 8   LSNRTSNSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQL 67
           +SN T   N  RIKG WSP+ED  L +LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQL
Sbjct: 1   MSNPT-RKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQL 60

Query: 68  SPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFS 127
           SP V+HR F+  ED  I++AHA  GNKW+TI+RLL GRTDNAIKNHWNSTL+R+      
Sbjct: 61  SPEVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK------ 120

Query: 128 SDSTAFMKRPSCEVSRSASDDDD--SEGSFKRRCFGMAVERNG----GGEGEGPETSLRL 187
                 ++  SC+   +   D +   E   KR   G      G     G   G + S + 
Sbjct: 121 ----CSVEGQSCDFGGNGGYDGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQS 180

Query: 188 SLPGEVVVPAACVKVKEEVTVDSEENDGRRHVTVA 217
           S    V  P     V+ EVT  S   D   +++++
Sbjct: 181 SGGAHVFKPT----VRSEVTASSSGEDPPTYLSLS 200

[Close]
BLAST of Cp4.1LG01g05420 vs. TAIR10
Match: AT3G55730.1 (AT3G55730.1 myb domain protein 109)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-42
Identity = 73/104 (70.19%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 18  NRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFT 77
           +++KG WS +EDA L KLV + GPRNWSLI+ GIPGRSGKSCRLRWCNQL P ++ +PF+
Sbjct: 53  SKVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFS 112

Query: 78  PAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
             ED +I+ AHAVHGNKW+ IA+LL GRTDNAIKNHWNSTLRR+
Sbjct: 113 DEEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRK 156

[Close]
BLAST of Cp4.1LG01g05420 vs. TAIR10
Match: AT5G67300.1 (AT5G67300.1 myb domain protein r1)

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 74/105 (70.48%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 17  SNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPF 76
           ++RIKG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF
Sbjct: 2   ADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPF 61

Query: 77  TPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +  ED  I +AHA  GNKW+TIARLL GRTDNA+KNHWNSTL+R+
Sbjct: 62  SAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cp4.1LG01g05420 vs. TAIR10
Match: AT3G50060.1 (AT3G50060.1 myb domain protein 77)

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-42
Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 1 

Query: 17  SNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPF 76
           ++R+KG WS +ED  L ++VE++GPRNWS IS  IPGRSGKSCRLRWCNQLSP V+HRPF
Sbjct: 2   ADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 61

Query: 77  TPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +P ED  IV A A  GNKW+TIARLL GRTDNA+KNHWNSTL+R+
Sbjct: 62  SPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cp4.1LG01g05420 vs. NCBI nr
Match: gi|449460939|ref|XP_004148201.1| (PREDICTED: transcription factor MYB44-like [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 5.0e-116
Identity = 227/293 (77.47%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 1   MVLIGIPLSNRTSNSNSN-------RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPG 60
           MVLIGI L N  +N+NSN       R+KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSP VQHRPFTPAED+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADFSSDSTAFMKRPSCEVSRSAS-----DDDDSEGSFKRRCFGMAVERNG 180
           WNSTLRRRRDAD SSDSTAF+KRPS EVSRSAS     DDDDSE S KR CF    +RN 
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCF----DRNS 180

Query: 181 GGEGEGPETSLRLSLPGEVVVPAAC-VKVKEEVTVDSEENDGRRHVTVAATATATAEEKG 240
            G GE PETSLRLSLPGEVVV A   VKVKEEVTV+SE+NDGRR V  AA      EEKG
Sbjct: 181 VGGGE-PETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAA-----EEEKG 240

Query: 241 NRKREMDESCMATIMQRMIAREVRNYIDSLRAHGGLSIGPNIGPGLDSGVQDT 281
           NRK+E+DESC+ATIMQRMIA+EVRNYIDSLRA GGL IGP +GPGLD   Q+T
Sbjct: 241 NRKKEVDESCLATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQET 283

[Close]
BLAST of Cp4.1LG01g05420 vs. NCBI nr
Match: gi|567886500|ref|XP_006435772.1| (hypothetical protein CICLE_v10032317mg [Citrus clementina])

HSP 1 Score: 284.6 bits (727), Expect = 1.8e-73
Identity = 158/273 (57.88%), Postives = 191/273 (69.96%), Query Frame = 1 

Query: 8   LSNRTSNSNSN---RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWC 67
           ++N ++NSNSN   RIKGSWSPQEDATLIKLVE+HGPRNWS+IS+GIPGRSGKSCRLRWC
Sbjct: 11  MNNNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWC 70

Query: 68  NQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDA 127
           NQLSP VQHRPFTPAEDS+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A
Sbjct: 71  NQLSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMA 130

Query: 128 DFSSDS----TAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVER---NGGGEGEGPET 187
           + SS S    +  MKRP  E + S+++ D   G  KR+C  ++ E    N      GPET
Sbjct: 131 ELSSASSESNSVMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPET 190

Query: 188 SLRLSLPGEVVVPAAC----VKVKEEVTVDSE---ENDGRRHVTVAATATATAEEKGNRK 247
            L LS PGE VV        V+ +E++ ++ E   + DG +            E++    
Sbjct: 191 LLTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGK------IEKEKGEDRCTVD 250

Query: 248 REMDESCMATIMQRMIAREVRNYIDSLRAHGGL 264
            EM+ESC+ TIM+RMIA EVRN  D LRA  GL
Sbjct: 251 MEMEESCLFTIMRRMIAEEVRNQFDGLRAQAGL 277

[Close]
BLAST of Cp4.1LG01g05420 vs. NCBI nr
Match: gi|802547651|ref|XP_012090668.1| (PREDICTED: transcriptional activator Myb-like [Jatropha curcas])

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-71
Identity = 154/263 (58.56%), Postives = 185/263 (70.34%), Query Frame = 1 

Query: 13  SNSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQ 72
           S   ++RIKGSWSPQEDA LIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQ
Sbjct: 5   SGCGADRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQ 64

Query: 73  HRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF---SSD 132
           HRPF+PAED++IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+    SS+
Sbjct: 65  HRPFSPAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSE 124

Query: 133 STAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVERNGGGEGEG----PETSLRLSLPG 192
           + + MKRP  +V    S +  SE   KR+C G A   +   +GE     PETSL LS PG
Sbjct: 125 ANSVMKRPCLDV----STESGSESGVKRQCLG-APPEDSSFDGEAGIVEPETSLTLSPPG 184

Query: 193 EVVVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQRM 252
           +  V     +  +EV V   E D  R +          EE+     +++E+C+ TIMQRM
Sbjct: 185 DGFVRTEVGEKVKEVAVKGGEQDVDRQM----VGEEEEEEEETCGLQIEETCLLTIMQRM 244

Query: 253 IAREVRNYIDSLRAHGGLSIGPN 269
           IA EVR+YID LR+  G + GPN
Sbjct: 245 IATEVRSYIDRLRSKNGFA-GPN 257

[Close]
BLAST of Cp4.1LG01g05420 vs. NCBI nr
Match: gi|224098716|ref|XP_002311241.1| (hypothetical protein POPTR_0008s07100g [Populus trichocarpa])

HSP 1 Score: 273.1 bits (697), Expect = 5.5e-70
Identity = 153/259 (59.07%), Postives = 181/259 (69.88%), Query Frame = 1 

Query: 14  NSNSNRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQH 73
           N   +RIKGSWSPQEDATLIKLVE+HGPRNWS+ISTGIPGRSGKSCRLRWCNQLSP VQH
Sbjct: 5   NGGDHRIKGSWSPQEDATLIKLVEQHGPRNWSMISTGIPGRSGKSCRLRWCNQLSPEVQH 64

Query: 74  RPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRD--ADFSSDST 133
           RPFTPAED+ IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R   +  SS+S 
Sbjct: 65  RPFTPAEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSSASSESN 124

Query: 134 AFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVERN--GGGEG-EGPETSLRLSLPGE-V 193
           +  KR + EVS  +  + DS GS KR+C   +   N   G  G +GPETSL LS PG+  
Sbjct: 125 SVFKRSTLEVSVVSESESDS-GS-KRQCLHASPGHNSVNGDVGVDGPETSLTLSPPGDGF 184

Query: 194 VVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQRMIA 253
           V  A   K+KE V V+  E D    +   A       EK     EMDE C+  ++Q++I 
Sbjct: 185 VSMAVAEKLKEGVAVNGREKDLGESIMKDA-------EKIRCTEEMDEDCVRALIQKIIQ 244

Query: 254 REVRNYIDSLRAHGGLSIG 267
            EVR Y D L+   G++IG
Sbjct: 245 EEVRIYFDRLKTRNGVTIG 254

[Close]
BLAST of Cp4.1LG01g05420 vs. NCBI nr
Match: gi|641850046|gb|KDO68919.1| (hypothetical protein CISIN_1g046570mg, partial [Citrus sinensis])

HSP 1 Score: 270.8 bits (691), Expect = 2.7e-69
Identity = 152/259 (58.69%), Postives = 178/259 (68.73%), Query Frame = 1 

Query: 13  SNSNSN-RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAV 72
           SNSN+N RIKGSWSPQEDATLIKLVE+HGPRNWS+IS+GIPGRSGKSCRLRWCNQLSP V
Sbjct: 3   SNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQLSPTV 62

Query: 73  QHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDS- 132
           QHRPFTPAEDS+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+ SS S 
Sbjct: 63  QHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAELSSASS 122

Query: 133 ---TAFMKRPSCEVSRSASDDDDSEGSFKRRCFGMAVER---NGGGEGEGPETSLRLSLP 192
              +  MKRP  E + S+++ D   G  KR+C  ++ E    N      GPET       
Sbjct: 123 ESNSVMMKRPGFENNISSAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPET-----FG 182

Query: 193 GEVVVPAACVKVKEEVTVDSEENDGRRHVTVAATATATAEEKGNRKREMDESCMATIMQR 252
           GE V     +K+ +E   D    DG +            E++     EM+ESC+ TIM+R
Sbjct: 183 GEKVEDEEKLKINKECDGD---GDGGK------IEKEKGEDRCTVDMEMEESCLFTIMRR 242

Query: 253 MIAREVRNYIDSLRAHGGL 264
           MIA EVRN  D LRA  GL
Sbjct: 243 MIAEEVRNQFDGLRAQAGL 247

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g05420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB44_ARATH7.0e-4170.48Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MB3R1_ARATH5.5e-3046.90Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1[more]
MYBA_CHICK5.5e-3054.72Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1[more]
MYB_MOUSE7.2e-3054.72Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2[more]
MYB_CHICK7.2e-3054.72Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1[more]
BLAST of Cp4.1LG01g05420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQJ2_CUCSA3.5e-11677.47Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1[more]
V4T705_9ROSI1.3e-7357.88Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1[more]
A0A067LKB3_JATCU6.9e-7258.56MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1[more]
B9HHT0_POPTR3.8e-7059.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07100g PE=4 SV=1[more]
A0A067FND1_CITSI1.9e-6958.69Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046570mg PE=4 S... [more]
BLAST of Cp4.1LG01g05420 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23290.11.6e-4341.49 myb domain protein 70[more]
AT4G37260.17.9e-4346.51 myb domain protein 73[more]
AT3G55730.12.3e-4270.19 myb domain protein 109[more]
AT5G67300.13.9e-4270.48 myb domain protein r1[more]
AT3G50060.15.1e-4270.48 myb domain protein 77[more]
BLAST of Cp4.1LG01g05420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460939|ref|XP_004148201.1|5.0e-11677.47PREDICTED: transcription factor MYB44-like [Cucumis sativus][more]
gi|567886500|ref|XP_006435772.1|1.8e-7357.88hypothetical protein CICLE_v10032317mg [Citrus clementina][more]
gi|802547651|ref|XP_012090668.1|1.0e-7158.56PREDICTED: transcriptional activator Myb-like [Jatropha curcas][more]
gi|224098716|ref|XP_002311241.1|5.5e-7059.07hypothetical protein POPTR_0008s07100g [Populus trichocarpa][more]
gi|641850046|gb|KDO68919.1|2.7e-6958.69hypothetical protein CISIN_1g046570mg, partial [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g05420.1Cp4.1LG01g05420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 75..117
score: 8.9E-15coord: 21..66
score: 1.6
IPR001005SANT/Myb domainSMARTSM00717santcoord: 72..120
score: 1.2E-14coord: 20..69
score: 2.8
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 22..74
score: 2.1E-24coord: 75..121
score: 5.4
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 18..114
score: 1.16
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 16..71
score: 26.326coord: 72..122
score: 21
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..121
score: 1.6
NoneNo IPR availablePANTHERPTHR10641:SF553SUBFAMILY NOT NAMEDcoord: 1..121
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g05420Csa5G209490Cucumber (Chinese Long) v2cpecuB438
Cp4.1LG01g05420ClCG07G004340Watermelon (Charleston Gray)cpewcgB410
Cp4.1LG01g05420CSPI05G10810Wild cucumber (PI 183967)cpecpiB438
Cp4.1LG01g05420Lsi04G010910Bottle gourd (USVL1VR-Ls)cpelsiB355
Cp4.1LG01g05420MELO3C034442.2Melon (DHL92) v3.6.1cpemedB425
Cp4.1LG01g05420CsaV3_5G010280Cucumber (Chinese Long) v3cpecucB0542
Cp4.1LG01g05420Bhi07G000492Wax gourdcpewgoB0554
Cp4.1LG01g05420CsGy5G008140Cucumber (Gy14) v2cgybcpeB647
Cp4.1LG01g05420Carg18378Silver-seed gourdcarcpeB0130
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g05420Melon (DHL92) v3.6.1cpemedB451
Cp4.1LG01g05420Melon (DHL92) v3.6.1cpemedB477
Cp4.1LG01g05420Silver-seed gourdcarcpeB0467
Cp4.1LG01g05420Silver-seed gourdcarcpeB0939
Cp4.1LG01g05420Silver-seed gourdcarcpeB1387
Cp4.1LG01g05420Cucumber (Chinese Long) v3cpecucB0566
Cp4.1LG01g05420Wax gourdcpewgoB0543
Cp4.1LG01g05420Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g05420Cucurbita pepo (Zucchini)cpecpeB401
Cp4.1LG01g05420Cucumber (Gy14) v1cgycpeB0979
Cp4.1LG01g05420Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g05420Cucurbita maxima (Rimu)cmacpeB723
Cp4.1LG01g05420Cucurbita moschata (Rifu)cmocpeB582
Cp4.1LG01g05420Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g05420Cucurbita moschata (Rifu)cmocpeB675
Cp4.1LG01g05420Bottle gourd (USVL1VR-Ls)cpelsiB318
Cp4.1LG01g05420Watermelon (97103) v1cpewmB418
Cp4.1LG01g05420Melon (DHL92) v3.5.1cpemeB367
Cp4.1LG01g05420Cucumber (Gy14) v2cgybcpeB795