CsaV3_5G000270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G000270
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUDP-N-acetylmuramate--L-alanine ligase
Locationchr5 : 121858 .. 125967 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCATGTTTCCAAGATAAAAGTCCTTTAACAAATGGATATACAGTGATTTATTTGTTTCAATTACAAGATTACAAGAAACACATCCCTTTCATTTATCAACTAGAAGAGGTTAATTTATAATTAAGAAAAAAAGTAGTGTTGTAAAATAGGTAAACAAACAAAGTTGAAGGAAGAAGAGACTTAGAATCAAAGTTAAGAGATTGGGAAAACATAGGCATTATCAAAAAAAATTAAGATAAAAACGGAGAAGATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATGTTGGGTTTCCCTATTTTCCTTTAATTAGAGAAAAAAAATTGTGAGATGAAGATTTTGTTGTGTTAAAAAAAGGAATTGAATTGGTCATAATAATCTAATAATAGAAATTGAGAAACGAAGAATTAAAAAAAAAAATGTGCTGTCCTGTTAGACCCATCTTCCATTGTGTTGGCTGATTTTGTTGTGTGTTTCCGCAGAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGACCGCCTCTCTCTCTTTCTCTCTGGATCTGAGGTCCTTTCCAAATTAGGTTTTCTTCAGATTTCTTGCGGGATCGGATTGCTTTTCGTTTCTTTTCTTTTCTTTGTTCTATGCTGTTTTTTTTTCCTGTCCCTTTTCCTTACTTTGGAATTGAGGATTTCGTGTTCGATCAGTTTTTCTTCGTTTGTTGATATTTATCCTTCTTTTCTGTGAATTATAAATTGAATGTTATAATAATAAAAATTAACGGAAACAAATTGTGTCTCTTATCTTTGTTGGTAGTTTCTCATCGTTGTTTGAGATTCAGACCATTCAAAATTGAGATCTATCTTTCTTTGGACTGCATGAAGCCTGAAGAAAAATTCTTAAACCAATGACCCAAATTGAATTGGGATTAAGATGGGATATGGTGTTACTGATACTTAATCTGACCATTGGATGGTTTCAAAAGTCACCCGAGTTTCTGCTTGGTGGTGGGAATATTTCACTTTTTCTATTGAAATTGTGCAGATGCAGATCTGAGCTTTCTTTCTTTCTCCCATTTCTGTTTTTTTTATAAAAAACAATTGAAAGCATGCAGTTGTTCTTCTGATTACTCATTTCCGAGCTTTGTTTCTGCCTTTTTTTTTCTTGTTCTTGGATGTTCATGAGTCATAATGCAGTTAATGATATGGGATGTCCAGGAATTGGCTAACATATTCTGAAATATGATTAGAAGCAGTTGGAAAGACAATTTTCGTACTGTTTTGTCATTCATTTTCATGGATCTCAGACACAAAACACCTCATCAATTGTTATTTTATGTCTGAAAACAGAAGGCATTGTAATATAATATTTGATCAAACAGAGAAGAGAGAGATAGAGATCTTCTCCAAACTCCAAAGCAGAATAAACAATATGTGTGTGTGTGTATCAATATTTAAACAAGCATGAATGAAGTTTGTTCTTTGGAATTTAAAAAACAAAAGTGAGAAGAATGGAAGATGTTACATGTTTCTTTGTCTGCTTCTTGGGATTTGGAATTTAGATCTCAAAGTCGTTTAATTCTTTTTTTTTTTTTCTTTTTTCTTTTTGTCAGTACAGCTAATTGATTCTAATCATTTGGCTTCTGATTCAGTGCAGGAACATGGCCACATAGCTTGGTGGTAGCAGAGAGCTTTAATAGAAATGGCAGAAGAAAACAGGGGGAACAAGGCAACTGCAAATAAACACCTCTTTAGTTCACTATTTTAAATACCTCATACATTGTAAAGAATATTTAGATTGTATTCACTCATAGAGAAGCCAAGAACAGATCTTTTTCTTTATATATATATATATCTTGTAGTCCTCTGTTTCTTAAAAGTAACTGTATAAATCATTAGAATATGATCAAATCCCTTTCAGTCACAATCTAATCATCAACATCAAATTCCTTTCCTATCTCCCTTATTTTTTAACAAGTTCCAAATGGTAAATTCTCAGAATTTGTTGGCATTATATTTGCTTCACTACCATTACAAGATGGGGAAGAGAGATAAGTTCATAAGAACTTCAAGTCTTCTCAATCTGTTTGAACTTTCAATTCTATGGTAGCTTCTATAGAACATCTTTTACAAGAGAAGGGGAGAAAAAAAGAAACATAAGCCTCCTGCACAGAGAGCTTGTGTATTTACAACAGATGGAAACTCGAAGGATGCTAAATAGCTTATAGCTTAAGCTCATAACACCTGTCCTAAAGATGATGTTGTTGAATGAAATAAGTGAGAATAATACAGCCTATATAGTATATAATCTCTGTTAGCAAAAGGGTTGCTGCAGACTTGTGTTAGTGTGTAACAATACAGCAAGAAAGCAAACAAAAAAAACTTTTTTTTTCTTCTCTTTCAAATTCAAAGACCAGCCTGGCAGGTAAAGTCTCATCAGATGAAAACGACTGACTAAGTTTGCCCCACGCTCAAATCCTCATGTCTCTCGTCGTCTTGATACGAAGCAGAAGAAGAAATGGTCAAAATATCAAATCAATAAAAAATGGCCCACAAGATATAATGGCATATAACCAATTCTTCTTCAATGAATTCAGACCACCAATCTTGATTTCCTTGACCATGTAAGAGCAGAAAAAAGCAAGAGGTAAGAGGTCCTCCAAGCCCTGTAGTAACCTGCATCGTTGAGACAACTTCTCGTATCAATGTTATTTCCCCCAATACATGAATGACTTCACATGTTTGTTACTGGCCAGCAGCAAATACTCAAATCGCAACATCATAAAGTCTATGATTAAACTGCCTAGAGGATGATTGACAAGAGAATCCAGGTAAGCTAACCTTGGCCACTAGCTGATTTGAAGCCGTTTCCTCTATAGAGAAGCTTCTTCCATCAATTGTCATTTCCATAAACTGACCCTAGAGTATCAGAAAATCTATAGATATGCTCGAGGAAATTCTGAAAACGGTAACGTATCGATTATCAGCACATATGATTGTGTTTTATTGCAGCTGGTGATAACATTGGTTGGTTGATCATCTAAAATGAGATCAGGCTTCCATCATAGCTATTACTCAGCCAGGAGGCACTAACATGTGAAACACCACAATATGAAGAAATCACTTCATGTACTTGGAAAATCCTAAAATTTCATATAGGTACAGGCAAACCATAATTGTGAAACGACCTGATTCGTCCATCCCATCCTGCCGTCACGATAACCAGACCCCATGCATGAGAACTTGATGTATTTTGGCAAGACAACTTCAGAAATTTATACCGAGATTTATGCATCATAGATGGTTTCGGTAGTAGGCTTGAGGTTGGGAGCTTCTCCTCCGGCCAAGTTGCAGATCCTTTGGGGAAGGATTCTAATAACTCTTGGCTCAAAGAGAAAAACGCAGGTGATGGAAGGGGGAAAGTTTCCGATGAGTTCCTTTGCATGCCAGGAAAATGTCTTTCACCAGCCTCTGTGTTACATCTCAAACCGTACCATGGTACTGCAATGGAAGCATTGGAGGAGAAATATTCATACGACTTAATCTTTTTCACAGGGGAAAGAACGGCCTCGTTTTTATAACTGCAGTTCCATACATATACATTAGAATCCCCACTTGCCGAGATGATATGTTTCCCATCTGAGGTAAATGATGCAGACGTCTGGTTTCCAGTATTACAAGGCCCTGAACAGAAAGGACGAAACTTGCTTATGAGGGCACATGGAAGACAGGATACGACGAACGACACCATTTGGTTTAAAAGCAAAATCTTCATAATCGAAACCAAACAACCAATCAAGCTGACTGTAACCACATCAA

mRNA sequence

ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA

Coding sequence (CDS)

ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA

Protein sequence

MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Homology
[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_011654597.1 (PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654598.1 PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654599.1 PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654600.1 PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNXXXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG 60
           MKKGNREDLDEMKNXXXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKGNREDLDEMKNXXXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120

Query: 121 ANLPV 126
           ANLPV
Sbjct: 121 ANLPV 125

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_011654601.1 (PREDICTED: uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNXXXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG 60
           MKKGNREDLDEMKN  XXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKGNREDLDEMKN-EXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120

Query: 121 ANLPV 126
           ANLPV
Sbjct: 121 ANLPV 124

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_008437637.1 (PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437639.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437640.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 5.3e-45
Identity = 109/126 (86.51%), Postives = 110/126 (87.30%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNXXXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG 60
           MKK NREDLD+MKN             XXXXXXXXX IPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKENREDLDDMKN------EKIRSKAXXXXXXXXXVIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVND 120

Query: 121 VANLPV 126
           VANLPV
Sbjct: 121 VANLPV 120

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: KGN49839.1 (hypothetical protein Csa_5G139175 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_022922222.1 (uncharacterized protein LOC111430272 [Cucurbita moschata] >XP_022922223.1 uncharacterized protein LOC111430272 [Cucurbita moschata])

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

[Close]
BLAST of CsaV3_5G000270 vs. TAIR10
Match: AT4G10810.1 (unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 50 EKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPL 97
          EKL+  A+WV T+V SAFFASLERCSC+NLSTSDD ++ EE+H+RPL
Sbjct: 23 EKLDQAASWVSTTVISAFFASLERCSCVNLSTSDDDDEGEESHNRPL 69

[Close]
BLAST of CsaV3_5G000270 vs. TAIR10
Match: AT4G24026.1 (unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 42 NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLST 82
          N ST  S EK++  A+W+  +V SAFF SLERC+C+NLST
Sbjct: 10 NVSTTTSMEKIDHAASWISATVISAFFTSLERCACVNLST 49

[Close]
BLAST of CsaV3_5G000270 vs. TrEMBL
Match: tr|A0A1S3AU63|A0A1S3AU63_CUCME (uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 109/126 (86.51%), Postives = 110/126 (87.30%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNXXXXXXXXXXXXXXXXXXXXXXXIPMENQSTCLSYEKLNGMATWVG 60
           MKK NREDLD+MKN             XXXXXXXXX IPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKENREDLDDMKN------EKIRSKAXXXXXXXXXVIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVND 120

Query: 121 VANLPV 126
           VANLPV
Sbjct: 121 VANLPV 120

[Close]
BLAST of CsaV3_5G000270 vs. TrEMBL
Match: tr|A0A0A0KLU3|A0A0A0KLU3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.8e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

[Close]
BLAST of CsaV3_5G000270 vs. TrEMBL
Match: tr|M5X8A0|M5X8A0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G314400 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-21
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 41  ENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHE-DPEEAHDRPLMYC 100
           ++QS+CLSYEKLNG+A+W+GT VASAFFASLERCSCINLSTSDDHE +PEEAHDRPLM  
Sbjct: 4   QSQSSCLSYEKLNGVASWLGTHVASAFFASLERCSCINLSTSDDHEMNPEEAHDRPLMLF 63

Query: 101 TSTSSSVIRSFEPLP-----PPVNDVANLPV 126
            S S ++       P        NDV NLPV
Sbjct: 64  ASRSVNLSDHRPHYPSSSSSSAPNDVVNLPV 94

[Close]
BLAST of CsaV3_5G000270 vs. TrEMBL
Match: tr|A0A061G349|A0A061G349_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015451 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19
Identity = 59/88 (67.05%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMY- 99
           MENQ +CLSY     MA W+GTSVA AFFASLERCSCINLSTSDD +D  EAHDRPLM+ 
Sbjct: 1   MENQGSCLSY-----MAAWLGTSVAQAFFASLERCSCINLSTSDDADD-SEAHDRPLMFT 60

Query: 100 -CTSTSSSVIRSFEPLPPPVNDVANLPV 126
            C+S  SSV    + LPP  NDV NLPV
Sbjct: 61  NCSSICSSVTSRTDNLPP--NDVVNLPV 80

[Close]
BLAST of CsaV3_5G000270 vs. TrEMBL
Match: tr|A0A1R3JFE2|A0A1R3JFE2_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16806 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.3e-19
Identity = 61/89 (68.54%), Postives = 66/89 (74.16%), Query Frame = 0 

Query: 40  MENQ-STCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMY 99
           MENQ  +CLSY     MA+W+GTSVA AFFASLERCSCINLSTSDD ED  EAHDRPLM+
Sbjct: 1   MENQGGSCLSY-----MASWLGTSVAQAFFASLERCSCINLSTSDDAED-SEAHDRPLMF 60

Query: 100 --CTSTSSSVIRSFEPLPPPVNDVANLPV 126
             C+S SSSV      LPP  NDV NLPV
Sbjct: 61  TNCSSMSSSVTSRTNTLPP--NDVVNLPV 81

The following BLAST results are available for this feature:
BLAST of CsaV3_5G000270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654597.16.1e-49100.00PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP... [more]
XP_011654601.11.1e-4798.40PREDICTED: uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus][more]
XP_008437637.15.3e-4586.51PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 P... [more]
KGN49839.14.2e-42100.00hypothetical protein Csa_5G139175 [Cucumis sativus][more]
XP_022922222.11.4e-4096.51uncharacterized protein LOC111430272 [Cucurbita moschata] >XP_022922223.1 unchar... [more]
BLAST of CsaV3_5G000270 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10810.11.3e-1370.21unknown protein[more]
AT4G24026.11.4e-0757.50unknown protein[more]
BLAST of CsaV3_5G000270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G000270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AU63|A0A1S3AU63_CUCME3.5e-4586.51uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=... [more]
tr|A0A0A0KLU3|A0A0A0KLU3_CUCSA2.8e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1[more]
tr|M5X8A0|M5X8A0_PRUPE3.5e-2164.84Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G314400 PE=4 SV=1[more]
tr|A0A061G349|A0A061G349_THECC1.5e-1967.05Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015451 PE=4 SV=1[more]
tr|A0A1R3JFE2|A0A1R3JFE2_9ROSI4.3e-1968.54Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16806 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G000270.1CsaV3_5G000270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR34061:SF2SUBFAMILY NOT NAMEDcoord: 30..125
NoneNo IPR availablePANTHERPTHR34061FAMILY NOT NAMEDcoord: 30..125

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G000270CSPI05G02950Wild cucumber (PI 183967)cpicucB285
CsaV3_5G000270Cucsa.202320Cucumber (Gy14) v1cgycucB327
CsaV3_5G000270CmaCh02G011310Cucurbita maxima (Rimu)cmacucB0733
CsaV3_5G000270CmoCh02G011600Cucurbita moschata (Rifu)cmocucB0721
CsaV3_5G000270Cp4.1LG05g05970Cucurbita pepo (Zucchini)cpecucB0919
CsaV3_5G000270Carg14006Silver-seed gourdcarcucB0542
CsaV3_5G000270Cla004883Watermelon (97103) v1cucwmB444
CsaV3_5G000270MELO3C005905Melon (DHL92) v3.5.1cucmeB357
CsaV3_5G000270ClCG01G000300Watermelon (Charleston Gray)cucwcgB397
CsaV3_5G000270Lsi09G000120Bottle gourd (USVL1VR-Ls)cuclsiB355
CsaV3_5G000270MELO3C005905.2Melon (DHL92) v3.6.1cucmedB349
CsaV3_5G000270Bhi12G000574Wax gourdcucwgoB455
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G000270Cucumber (Chinese Long) v3cuccucB119
CsaV3_5G000270Cucumber (Chinese Long) v3cuccucB123
CsaV3_5G000270Silver-seed gourdcarcucB0541
CsaV3_5G000270Silver-seed gourdcarcucB0577
CsaV3_5G000270Silver-seed gourdcarcucB0611
CsaV3_5G000270Silver-seed gourdcarcucB1035
CsaV3_5G000270Cucumber (Gy14) v2cgybcucB130
CsaV3_5G000270Cucumber (Gy14) v2cgybcucB133
CsaV3_5G000270Cucumber (Gy14) v2cgybcucB232
CsaV3_5G000270Cucumber (Gy14) v1cgycucB007
CsaV3_5G000270Cucumber (Gy14) v1cgycucB393
CsaV3_5G000270Cucurbita maxima (Rimu)cmacucB0305
CsaV3_5G000270Cucurbita maxima (Rimu)cmacucB0342
CsaV3_5G000270Cucurbita maxima (Rimu)cmacucB0402
CsaV3_5G000270Cucurbita maxima (Rimu)cmacucB0500
CsaV3_5G000270Cucurbita maxima (Rimu)cmacucB0735
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0296
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0338
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0398
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0490
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0722
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0723
CsaV3_5G000270Cucurbita moschata (Rifu)cmocucB0976
CsaV3_5G000270Cucurbita pepo (Zucchini)cpecucB0046
CsaV3_5G000270Cucurbita pepo (Zucchini)cpecucB0226
CsaV3_5G000270Cucurbita pepo (Zucchini)cpecucB0275
CsaV3_5G000270Cucurbita pepo (Zucchini)cpecucB0774
CsaV3_5G000270Cucurbita pepo (Zucchini)cpecucB0910
CsaV3_5G000270Cucurbita pepo (Zucchini)cpecucB1071
CsaV3_5G000270Wild cucumber (PI 183967)cpicucB163
CsaV3_5G000270Wild cucumber (PI 183967)cpicucB166
CsaV3_5G000270Bottle gourd (USVL1VR-Ls)cuclsiB345
CsaV3_5G000270Bottle gourd (USVL1VR-Ls)cuclsiB401
CsaV3_5G000270Bottle gourd (USVL1VR-Ls)cuclsiB402
CsaV3_5G000270Melon (DHL92) v3.5.1cucmeB411
CsaV3_5G000270Melon (DHL92) v3.5.1cucmeB416
CsaV3_5G000270Melon (DHL92) v3.6.1cucmedB404
CsaV3_5G000270Melon (DHL92) v3.6.1cucmedB410
CsaV3_5G000270Watermelon (Charleston Gray)cucwcgB385
CsaV3_5G000270Watermelon (Charleston Gray)cucwcgB413
CsaV3_5G000270Watermelon (Charleston Gray)cucwcgB417
CsaV3_5G000270Watermelon (97103) v1cucwmB423
CsaV3_5G000270Watermelon (97103) v1cucwmB433
CsaV3_5G000270Watermelon (97103) v1cucwmB430
CsaV3_5G000270Watermelon (97103) v2cucwmbB351
CsaV3_5G000270Watermelon (97103) v2cucwmbB395
CsaV3_5G000270Watermelon (97103) v2cucwmbB399
CsaV3_5G000270Wax gourdcucwgoB464
CsaV3_5G000270Wax gourdcucwgoB493