CSPI05G02950 (gene) Wild cucumber (PI 183967)

NameCSPI05G02950
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaA09g22320D protein
LocationChr5 : 3389683 .. 3390445 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGATTACAAGAAACACATCCCTTTCATTTATCAACTAGAAGAGGTTAATTTATAATTAAGAAAAAAAGTAGTGTTGTAAAATAGGTAAACAAACAAAGTTGAAGGAAGAAGAGACTTAGAATCAAAGTTAAGAGATTGGGAAAACATAGGCATTATCAAAAAAAATTAAAATAAAAAAGGAGAAGATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATGTTGGGTTTCCCTATTTTCCTTTAATTAGAGAAAAAAAATTGTGAGATGAAGATTTTGTTGTGTTAAAAAAAGGAATTGAATTGGTCATAATAATCTAATAATAGAAATTGAGAAACGAAGAATTAAAAAAAAAAATGTGCTGTCCTGTTAGACCCATCTTCCATTGTGTTGGCTGATTTTGTTGTGTGTTTCCGCAGAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA

mRNA sequence

ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA

Coding sequence (CDS)

ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA
BLAST of CSPI05G02950 vs. TrEMBL
Match: A0A0A0KLU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139175 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.4e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

BLAST of CSPI05G02950 vs. TrEMBL
Match: M5X8A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013961mg PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-21
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 1

Query: 41  ENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHE-DPEEAHDRPLMYC 100
           ++QS+CLSYEKLNG+A+W+GT VASAFFASLERCSCINLSTSDDHE +PEEAHDRPLM  
Sbjct: 4   QSQSSCLSYEKLNGVASWLGTHVASAFFASLERCSCINLSTSDDHEMNPEEAHDRPLMLF 63

Query: 101 TSTSSSVIRSFEPLP-----PPVNDVANLPV 126
            S S ++       P        NDV NLPV
Sbjct: 64  ASRSVNLSDHRPHYPSSSSSSAPNDVVNLPV 94

BLAST of CSPI05G02950 vs. TrEMBL
Match: A0A061G349_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015451 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 59/88 (67.05%), Postives = 65/88 (73.86%), Query Frame = 1

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMY- 99
           MENQ +CLSY     MA W+GTSVA AFFASLERCSCINLSTSDD +D  EAHDRPLM+ 
Sbjct: 1   MENQGSCLSY-----MAAWLGTSVAQAFFASLERCSCINLSTSDDADD-SEAHDRPLMFT 60

Query: 100 -CTSTSSSVIRSFEPLPPPVNDVANLPV 126
            C+S  SSV    + LPP  NDV NLPV
Sbjct: 61  NCSSICSSVTSRTDNLPP--NDVVNLPV 80

BLAST of CSPI05G02950 vs. TrEMBL
Match: W9SCE5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011856 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.4e-16
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHE-DPEEAHDRPLMY 99
           MENQ T  + EK+NGMA  +GT VASAFFASLERCSCINLST+DDH+ D +E+HDRPLM 
Sbjct: 1   MENQGTT-TCEKINGMANLLGTYVASAFFASLERCSCINLSTTDDHDADADESHDRPLM- 60

Query: 100 CTSTSSSVIRSFEPLPPPVNDVANLPV 126
             S+S S+  S   +    NDV NLPV
Sbjct: 61  -LSSSRSLNLSDHRVSASRNDVVNLPV 84

BLAST of CSPI05G02950 vs. TrEMBL
Match: A0A067JIY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27126 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-16
Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 1

Query: 40  MEN-QSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMY 99
           M+N    C SYEKL     WVG SV SAFFASLERC+CINLST+DD ED EEAHDRPLM+
Sbjct: 1   MDNTMGNCWSYEKLK----WVGMSVVSAFFASLERCACINLSTADDAEDAEEAHDRPLMF 60

Query: 100 CTSTSSSVIRS 110
           C S S+S + S
Sbjct: 61  CNSISNSSVSS 67

BLAST of CSPI05G02950 vs. TAIR10
Match: AT4G10810.1 (AT4G10810.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 7.7e-14
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 1

Query: 42 NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPL 97
          N ST  S EKL+  A+WV T+V SAFFASLERCSC+NLSTSDD ++ EE+H+RPL
Sbjct: 16 NLSTA-SLEKLDQAASWVSTTVISAFFASLERCSCVNLSTSDDDDEGEESHNRPL 69

BLAST of CSPI05G02950 vs. TAIR10
Match: AT4G24026.1 (AT4G24026.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-12
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 1

Query: 42 NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDPEEAHDRPL 97
          N ST  S EK++  A+W+  +V SAFF SLERC+C+NLSTS  DD +D +E+H RPL
Sbjct: 10 NVSTTTSMEKIDHAASWISATVISAFFTSLERCACVNLSTSHDDDDDDDDESHHRPL 66

BLAST of CSPI05G02950 vs. NCBI nr
Match: gi|778698756|ref|XP_011654597.1| (PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120

Query: 121 ANLPV 126
           ANLPV
Sbjct: 121 ANLPV 125

BLAST of CSPI05G02950 vs. NCBI nr
Match: gi|778698775|ref|XP_011654601.1| (PREDICTED: uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-59
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 1

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKKGNREDLDEMKNEKMKNEKI SKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKGNREDLDEMKNEKMKNEKI-SKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120

Query: 121 ANLPV 126
           ANLPV
Sbjct: 121 ANLPV 124

BLAST of CSPI05G02950 vs. NCBI nr
Match: gi|659074498|ref|XP_008437637.1| (PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 1

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKK NREDLD+M     KNEKIRSKAG KKKKKKKS IPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKENREDLDDM-----KNEKIRSKAG-KKKKKKKSVIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVND 120

Query: 121 VANLPV 126
           VANLPV
Sbjct: 121 VANLPV 120

BLAST of CSPI05G02950 vs. NCBI nr
Match: gi|700194662|gb|KGN49839.1| (hypothetical protein Csa_5G139175 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

BLAST of CSPI05G02950 vs. NCBI nr
Match: gi|657970070|ref|XP_008376768.1| (PREDICTED: uncharacterized protein LOC103439904 [Malus domestica])

HSP 1 Score: 115.2 bits (287), Expect = 8.5e-23
Identity = 63/101 (62.38%), Postives = 73/101 (72.28%), Query Frame = 1

Query: 41  ENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHE-DPEEAHDRPLM-- 100
           ++QS+CLSYEK+NG+A+W+GT VASAFFASLERCSCINLSTSDDHE +PEEAHDRPLM  
Sbjct: 4   QSQSSCLSYEKINGVASWLGTHVASAFFASLERCSCINLSTSDDHETNPEEAHDRPLMLF 63

Query: 101 -------------YCTSTSSSVIRSFEPLPPPVNDVANLPV 126
                        Y +STSS+   S     PP NDV NLPV
Sbjct: 64  ASRSVNLSDHRPHYVSSTSSASASSSS--APPPNDVVNLPV 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLU3_CUCSA3.4e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139175 PE=4 SV=1[more]
M5X8A0_PRUPE3.3e-2164.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013961mg PE=4 SV=1[more]
A0A061G349_THECC1.1e-1967.05Uncharacterized protein OS=Theobroma cacao GN=TCM_015451 PE=4 SV=1[more]
W9SCE5_9ROSA5.4e-1662.07Uncharacterized protein OS=Morus notabilis GN=L484_011856 PE=4 SV=1[more]
A0A067JIY9_JATCU7.1e-1666.20Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27126 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G10810.17.7e-1467.27 unknown protein[more]
AT4G24026.19.4e-1256.14 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778698756|ref|XP_011654597.1|2.7e-61100.00PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus][more]
gi|778698775|ref|XP_011654601.1|1.9e-5999.20PREDICTED: uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus][more]
gi|659074498|ref|XP_008437637.1|1.1e-5192.06PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo][more]
gi|700194662|gb|KGN49839.1|4.8e-42100.00hypothetical protein Csa_5G139175 [Cucumis sativus][more]
gi|657970070|ref|XP_008376768.1|8.5e-2362.38PREDICTED: uncharacterized protein LOC103439904 [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G02950.1CSPI05G02950.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34061FAMILY NOT NAMEDcoord: 40..97
score: 3.1
NoneNo IPR availablePANTHERPTHR34061:SF2SUBFAMILY NOT NAMEDcoord: 40..97
score: 3.1

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G02950Wild cucumber (PI 183967)cpicpiB110
CSPI05G02950Wild cucumber (PI 183967)cpicpiB114
CSPI05G02950Cucumber (Gy14) v1cgycpiB004
CSPI05G02950Cucumber (Gy14) v1cgycpiB387
CSPI05G02950Cucurbita maxima (Rimu)cmacpiB298
CSPI05G02950Cucurbita maxima (Rimu)cmacpiB346
CSPI05G02950Cucurbita maxima (Rimu)cmacpiB425
CSPI05G02950Cucurbita maxima (Rimu)cmacpiB618
CSPI05G02950Cucurbita moschata (Rifu)cmocpiB257
CSPI05G02950Cucurbita moschata (Rifu)cmocpiB288
CSPI05G02950Cucurbita moschata (Rifu)cmocpiB337
CSPI05G02950Cucurbita moschata (Rifu)cmocpiB414
CSPI05G02950Cucurbita moschata (Rifu)cmocpiB611
CSPI05G02950Cucumber (Chinese Long) v2cpicuB221
CSPI05G02950Cucumber (Chinese Long) v2cpicuB224
CSPI05G02950Cucumber (Chinese Long) v2cpicuB240
CSPI05G02950Melon (DHL92) v3.5.1cpimeB399
CSPI05G02950Melon (DHL92) v3.5.1cpimeB404
CSPI05G02950Watermelon (Charleston Gray)cpiwcgB379
CSPI05G02950Watermelon (Charleston Gray)cpiwcgB413
CSPI05G02950Watermelon (97103) v1cpiwmB406
CSPI05G02950Watermelon (97103) v1cpiwmB416
CSPI05G02950Watermelon (97103) v1cpiwmB411
CSPI05G02950Cucurbita pepo (Zucchini)cpecpiB038
CSPI05G02950Cucurbita pepo (Zucchini)cpecpiB189
CSPI05G02950Cucurbita pepo (Zucchini)cpecpiB227
CSPI05G02950Cucurbita pepo (Zucchini)cpecpiB624
CSPI05G02950Cucurbita pepo (Zucchini)cpecpiB733
CSPI05G02950Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G02950Bottle gourd (USVL1VR-Ls)cpilsiB381
CSPI05G02950Bottle gourd (USVL1VR-Ls)cpilsiB382
CSPI05G02950Melon (DHL92) v3.6.1cpimedB394
CSPI05G02950Melon (DHL92) v3.6.1cpimedB401
CSPI05G02950Cucumber (Gy14) v2cgybcpiB126
CSPI05G02950Cucumber (Gy14) v2cgybcpiB226
CSPI05G02950Silver-seed gourdcarcpiB0543
CSPI05G02950Silver-seed gourdcarcpiB0576
CSPI05G02950Silver-seed gourdcarcpiB0610
CSPI05G02950Silver-seed gourdcarcpiB1029
CSPI05G02950Cucumber (Chinese Long) v3cpicucB263
CSPI05G02950Cucumber (Chinese Long) v3cpicucB266
CSPI05G02950Watermelon (97103) v2cpiwmbB349
CSPI05G02950Watermelon (97103) v2cpiwmbB399
CSPI05G02950Watermelon (97103) v2cpiwmbB403
CSPI05G02950Wax gourdcpiwgoB456
CSPI05G02950Wax gourdcpiwgoB484