Cucsa.202320 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATGTTGGGTTTCCCTATTTTCCTTTAATTAGAGAAAAAAAATTGTGAGATGAAGATTTTGTTGTGTTAAAAAAAGGAATTGAATTGGTCATAATAATCTAATAATAGAAATTGAGAAACGAAGAATTAAAAAAAAAAATGTGCTGTCCTGTTAGACCCATCTTCCATTGTGTTGGCTGATTTTGTTGTGTGTTTCCGCAGAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGACCGCCTCTCTCTCTTTCTCTCTGGATCTGAGGTCCTTTCCAAATTAGGTTTTCTTCAGATTTCTTGCGGGATCGGATTGCTTTTCGTTTCTTTTCTTTTCTTTGTTCTATGCTGTTTTTTTTCCTGTCCCTTTTCCTTACTTTGGAATTGAGGATTTCGTGTTCGATCAGTTTTTCTTCGTTTGTTGATATTTATCCTTCTTTTCTGTGAATTATAAATTGAATGTTATAATAATAAAAATTAACGGAAACAAATTGTGTCTCTTATCTTTGTTGGTAGTTTCTCATCGTTGTTTGAGATTCAGACCATTCAAAATTGAGATCTATCTTTCTTTGGACTGCATGAAGCCTGAAGAAAAATTCTTAAACCAATGACCCAAATTGAATTGGGATTAAGATGGGATATGGTGTTACTGATACTTAATCTGACCATTGGATGGTTTCAAAAGTCACCCGAGTTTCTGCTTGGTGGTGGGAATATTTCACTTTTTCTATTGAAATTGTGCAGATGCAGATCTGAGCTTTCTTTCTTTCTCCCATTTCTGTTTTTTTTATAAAAAACAATTGAAAGCATGCAGTTGTTCTTCTGATTACTCATTTCCGAGCTTTGTTTCTGCCTTTTTTTTTCTTGTTCTTGGATGTTCATGAGTCATAATGCAGTTAATGATATGGGATGTCCAGGAATTGGCTAACATATTCTGAAATATGATTAGAAGCAGTTGGAAAGACAATTTTCGTACTGTTTTGTCATTCATTTTCATGGATCTCAGACACAAAACACCTCATCAATTGTTATTTTATGTCTGAAAACAGAAGGCATTGTAATATAATATTTGATCAAACAGAGAAGAGAGAGATAGAGATCTTCTCCAAACTCCAAAGCAGAATAAACAATATGTGTGTGTGTGTATCAATATTTAAACAAGCATGAATGAAGTTTGTTCTTTGGAATTTAAAAAACAAAAGTGAGAAGAATGGAAGATGTTACATGTTTCTTTGTCTGCTTCTTGGGATTTGGAATTTAGATCTCAAAGTCGTTTAATTCTTTTTTTTTTTCTTTTTTCTTTTTGTCAGTACAGCTAATTGATTCTAATCATTTGGCTTCTGATTCAGTGCAGGAACATGGCCACATAGCTTGGTGGTAGCAGAGAGCTTTAATAGAAATGGCAGAAGAAAACAGGGGGAACAAGGCAACTGCAAATAAACACCTCTTTAGTTCACTATTTTAAATACCTCATACATTGTAAAGAATATTTAGATTGTATTCACTCATAGAGAAGCCAAGAACAGATCTTTTTCTTTATATATATATATATCTTGTAGTCCTCTGTTTCTTAAAAGTAACTGTATAAATCATTAGAATATGATCAAATCCCTTTCAGTCACA AGATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCaagaagaagaagaagaagaagaaATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGACCGCCTCTCTCTCTTTCTCTCTGGATCTGAGGTCCTTTCCAAATTAGGAACATGGCCACATAGCTTGGTGGTAGCAGAGAGCTTTAATAGAAATGGCAGAAGAAAACAGGGGGAACAAGGCAACTGCAAATAAACACCTCTTTAGTTCACTATTTTAAATACCTCATACATTGTAAAGAATATTTAGATTGTATTCACTCATAGAGAAGCCAAGAACAGATCTTTTTCTTTATATATATATATATCTTGTAGTCCTCTGTTTCTTAAAAGTAACTGTATAAATCATTAGAATATGATCAAATCCCTTTCAGTCACA ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV*
BLAST of Cucsa.202320 vs. TrEMBL
Match: A0A0A0KLU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139175 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Cucsa.202320 vs. TrEMBL
Match: M5X8A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013961mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-21 Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 1
BLAST of Cucsa.202320 vs. TrEMBL
Match: A0A061G349_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015451 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.7e-20 Identity = 59/88 (67.05%), Postives = 65/88 (73.86%), Query Frame = 1
BLAST of Cucsa.202320 vs. TrEMBL
Match: W9SCE5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011856 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16 Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1
BLAST of Cucsa.202320 vs. TrEMBL
Match: A0A067JIY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27126 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.1e-16 Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 1
BLAST of Cucsa.202320 vs. TAIR10
Match: AT4G10810.1 (AT4G10810.1 unknown protein) HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14 Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 1
BLAST of Cucsa.202320 vs. TAIR10
Match: AT4G24026.1 (AT4G24026.1 unknown protein) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12 Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 1
BLAST of Cucsa.202320 vs. NCBI nr
Match: gi|778698756|ref|XP_011654597.1| (PREDICTED: uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-65 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
BLAST of Cucsa.202320 vs. NCBI nr
Match: gi|778698775|ref|XP_011654601.1| (PREDICTED: uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63 Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 1
BLAST of Cucsa.202320 vs. NCBI nr
Match: gi|659074498|ref|XP_008437637.1| (PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo]) HSP 1 Score: 222.6 bits (566), Expect = 3.8e-55 Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 1
BLAST of Cucsa.202320 vs. NCBI nr
Match: gi|700194662|gb|KGN49839.1| (hypothetical protein Csa_5G139175 [Cucumis sativus]) HSP 1 Score: 180.6 bits (457), Expect = 1.7e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Cucsa.202320 vs. NCBI nr
Match: gi|657970070|ref|XP_008376768.1| (PREDICTED: uncharacterized protein LOC103439904 [Malus domestica]) HSP 1 Score: 116.3 bits (290), Expect = 3.8e-23 Identity = 63/101 (62.38%), Postives = 73/101 (72.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |