CsaV3_4G031800 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G031800
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	SNARE-associated protein-related
Location	chr4 : 22348816 .. 22359063 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGGGGTAAGTGGGTTGAGTTTGTTCCGTGTTGGCTTTGCCAGGCCTGTTATCATTAGTTCTGTGGTGTAACCCAGTTGGGTCTTCATTAGTTCTGTGGCTTTGGATTGTTTGTTAAAAAAAAAAAAAAAAACTCTCCCTCCCAGCTCTCTCGCCTCGTCTGGCCACATAGCTGCCGCTGCACCTCCGTCCGACGTTCGCCCAACACCGCAGTCGCACGCTGGTCGTTTTCCATCTCCGCCGGAGTCGCACATCGGGACAGAATTGAAACAATATTATCCCAGACATCATTTTATCTGAATTGGGCTACAAGCTTACGACGGACCAATTAGTGAATCCTTCTGGACTCATACCACAAGTTTTGCGAGTCCCTGAACGCAGCAAGTGTGGTAATTTCCCGTGTACTTCCCATGTGATTTCGATCTGGAATTCGTATATGTATATTCTGAGGACTAATGGAGATTAAACTCGAGGAAACTTTTGCACATTTCGGAGTTCCAGCCTCCGATTTGTTCATTATTATTTTTTATTTATCTTTTAATTACAGCAAATATAGTTGTGATTGAATCTGTAGGACTATTTTTCTTCAATTGCGGTAGCCGCGAGCTTGTCGTTTTCTTCAAAATTTTCTGTCTTGGACAGTCGATTACCGAGACTTATTCGTTGTGGTTATCAGTGTCGCTTTTGACTTTTCTCTTGTAGAATCATTACATGTTGAAAATTGTGGAAACTGTTTTCATTTAATTCTTTTTTTCCTCACAGTATCGATGCTACATTACAGTTGATTCTACATTATACTGCCAACTAACGAACTCATATATATCTGTAGAAAGATGGTCGATCATTAAAAATTGTAAATAGAGTTTGTTTATGATCGTATAATGATAAATTCTGTGGGGGTTTGTTTAGAATTTAGTTGAGATGCACAGTCCGGAGAAATTGGATGACGATTATTCTGCCAATGAGGACAGCAACGTCTCAGCTGAATTGGAGACTTCAATTACTCTCAATGGTGATCTCCAGGAAGGAAATGATAGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTTAAAAGCCAGAACCATCTTTCATCTTCCCTTGACCGTCTTACTACAGGTAAAATAAATTACTTCTACGTTGACTAGTTATTCCATAGCTTTGAAGATTCTGTCACTTGCTAGGTTTAAGGGAAGCTTATGCATCATTAATGGTTTTCTCTAATAATGATTACCTTTTCTCTTGGCTTATATGCAAAAATGCAGCTTCTGAAGTTCATAACCTTTTCAATGTTGTGAAAAGTTATTAGTTTAACTGTTAACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAATGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGGTGATTGACTTTGCTCTTCAATAGCCTCAATTTTACTGTCTTTTTATGACTTCTAGTTTAATGCAAACTTATTGGATAATATTATTGTTTGTCTAGTTTTTTTTACGGGAAATATTCCATCAGAATTTCATTAATAATATGAAATTACAAAAGAGCAAGTATGCCTTGTAGGATTACATAAAGCTATTCCTATGAAAAAGGTTGTAATCACAAAAAGAGGGTGTGAATTTACACCAAGTGAGCAATGTTTACCAAAGGTGATAAAAAAAAGTGAACGAAATCTCTCTTTGGCTACAAAGATACGATGATTTTGTTCGTTCAGATAATCCAAAAAGTCGGCTTTGGTGATGAAGGTCCATAATAGTTATTTTTTATCTTTGAACGGATGGCTAATAAGGAGCATATTCAATAGGATGATTGGGAAGACCATATGATAAGTGAAGCATGATAGTTATTTAACCAGAAGAACTGAGCATAATTATTGAAAGGAGAGACAAATAGCACACACCAATTTACGTGGAAACTCGAGTACCGGGAGAAAACCACGATTGTTTGTTGTTATTATTTTCTAATGAATAATACAATAGATACAGGGGAGAATAAATAGAGTATACAAGGGAATAAAAAAGGAAAATATTTAGGAAATAAGGAAAATATTCTCGTAATCTTTCCATAAATATTCTAGGATTCTAACAAGGAAATTATTTAGAAAATAAGGAAGGGATTCTAACACTCCCCCTCAAGTTGGGACGTAAATATCAACGAAGCCCAACTTACTAACACAAAAGTCGAAGTTTGGTCTGAGAAGCCCCTTGGTAAGAACATTAGCAACCTGTTGACTCGAAGGGATTGCTAACAACCCTGTTCAACATGATAGAACTAAACATGTTGGGATTGATCGGCATTTCATGTTGAACAGGCTCTGATGAAGATCCGACAAGACTTTCTGAAGTCAAATTTCCTCGCATATTCCCAAATTCATAGCTCTATATTTGGCCTCAGCGCTGCTTCTGGCCACATCACTTTGCTTCTTACTCCTCCAAGTTACCAGATTGCCCCAAACAAAGGTACAATAATTGGAGGTAGACTTTCCGTCAACAACAGATCTTGCCCAATATGAGTCAGTATATGCCTCAATGGTCTTTCTGTCTGTTTTTCTAAACATCAGCTCTTTACTAGGTGTTGATTTCAAATATGTCAAAATTCGGTTGACAGCTTTCATATGTTCCTCATAAGGAACATGCATAAACTTGCTGACAACACTCACATGATAGGAAATATCAGGACGAGTATGGGATAAGTAAATTAATTTATCCACGAGGCGCTAATATTGTTCTTTATCAGCTGGAACTTGATCATCGAAGTTTCCTAGTTTACAGTTGAATTCAATAGGAGTGTCAGAAGGACGACATCCCAACATACCTGTCTCAGTTAGCAAATCAATGGTGTATTTCCTCTGAGACACGGAGATACCTTCTTTAGATCTGGCCACTTCTACTCCAAGGAAATATTTCAGATTTCCCAGATCCTTGATTTCAAATTCATCACCCATTCCTGTTTTAGTTGACTGATTTTTGCTTGATCATCTCTAGTCAAAACAATGATAGTTATTCTTTTCAAGAGCTTTCATTTCTTCCATGATAGCATTCTTCTATTCAGGACACTCTAACACAGTGTGAATATTTTTCGGTATTGTGGTAGAGTCAAGGCTGGCAGCAAAAGCTCTAAATTGTGGTGGGAGATTCTCATGACACATAATTACATATGGAGTGCTTTGTGCAGGACCTTGTACCTTTCCTCGGTGCAATAGGAAGATCAAGAGATGAATCATACCTGCTACTATTTTCAGTATGTTCAGCAACAACCTCGTTTCAATAATTTTGTCCTCTCTATCTATAATGGCCTCATCAATACTGCCCTGCTCACCCATATTTTCCAGAATAGTTGTCCCAGACTTGTCATTCTCACATGTTCTGCTATTACTATTTGAATTAATTGAATCAGTCATACATTGATCTCTTATTGGTTCAGAATCCTGCACTTGAGCCGTCTGAACAATAGGAGACTCAACTTCCTTTATGAGATTCCTCCTATAGTGGTTTTCCAAGGAACTGATTTGTTGGTAGGACTGTATTGTGAGGGCTAGGGTCAGGTAAGGTAACCACAGTAGGATAAGAAGACTCTAAAGGAAGTATATAGTTAGACTCTTCACTCACATTCTCCCACTGAAGTAGGCTAATGGGAAAAAAGGACGATTTTCAATAAATATGACATCCATGGTGACAAAGTACTTACGTGAAGATGGATGAAAACATTTATAGCCTTGTTGGTGGAGAGGATATGTTGGAAGTCAATTTTCCAGCAAGGTTGTTTAGAATATGTGATCACTATATTGATAGTAATAGGGCTTACAATATAGAAATCGAATTGAACAAAAAGATCAATTCGATGAAACAAACAGAAAATAAACTCACACTCTGTTATTCTCTCTTTCAAGAATATACAGAAATGATTTCCTCCACAAAATACCCAATGCCCTCTCTCTCTCTTCCACTTCTTATTTATATTCTCCCTCCCACTCACTGTGGTCCCCTCCTAGTCAGTTACATATTAACTAACTCACTCTCCCGCCTATTTTCTATTTTATTTCTCCTCCTACTATACTGGTGGATTATTGGTGGTCTAACATTGCATTCCCGGTCCAGTTTCACCTTGTTCTCAAGGTAGAAAAAAGACTACTGAAAATCGTCATAATTCTCCCAAGTGGCCTCATGTCTTGGCAATCCCTTCCAGCTTGTTAAAACCTCATAAACGCCTTTACTATTCTTTTGATATCCATAAATCTCATCAGGTACAACAGTCCATTCATGGTTTTCAGTAAAAAAGGGTACCCACTCCACCTTATCTTTGCATTCCCCAAAGGCTTTTTTCAACTGTGAAATATGGAACACTGGATGTATTGTTGCTGAAGTAGGGAGTTTGAGTTTATATGCTCCAAAACCAATCTTCTTCAGAATATGATAAGGATCGAAGTACTTAGGGGACAACTTCTCATTCCTTCTTTTTCGCATAGAAACCTGTCGGTAGGGTCTGATTTTTAAGAAGATCATATCTCCTTCTTCAAATTCTACATGTCTTCTCTTCATATCTGCATAACTCTTCATCTTTTCTTGAGCTATTCGCAAATGCTCCTTCAAAGTACCCCAATGCTACATCCCTTTCTTTAAGTTGCTCATCAAGCATGGAGTTCGGAGTCTCTCTGTCTCCATAGTAAATAAGGGCCGGTGGCGTTCTTCCATAGACAGCTTGAAAAGGAGTCACACCCAAGATCGATGGTATGTAGTATTATACCAATATTCAGCCCAACGAATCCACTTCACCCACTCTTTCGGTCTCTCTCCACAAAAACAATGCAAATAGATTTCAACAGATTTATTGACAATCTCTATTTGCCCATCCGTTTGTGGATGATTAGCTGTACTCCTATTCAACTTGGTACCTGCTAACCGAAATAACTCTCTCCAAAAGTTACTCATAAATATTTTGTCACGATTGGATACAGTGGATTGGGGAAACCCATGTAGTCTTACTACTTCCTTAATAAACAACTCAGCCACCACTTTAGCATCGAACATATGTTTTAGACTTAGGAAATGGCCATATTTACTAAACCGATCCACCACCACCAAGATAACTTCATACCCCACGACTTTGGCAGCCTTTCAATGAAATCCATTGAAATATCTTCCCACACTCTACTTGGAATCTCCAACGGAACTAGTAATCCCGCAGGTGTAAGAGTCGATGCCTTATTTCTTTGGCAAATAGCACATTCTTCGCAGTATTTTTTAACTTCTGATTTCATGCCATCCCAAAGCAGCTCTCTGGTCAATCTCTTGTATGTTCTTAAGAATCTCGAATGGCCTCCAAGGATAGAATCATAATAGGTATGCATAATGTTAGGAATCAATAAAGAATTCTTTGCAATCACCAACCTTCCTTTATAATATATAAGTATCCCCTGTAGTAAGGAATAATTTTTAACTTCTTCTTCATTCTGTAGCTTCATGATTATTTCTTTCAATTTCCCATCCCTCTCTACCTCCTCCTTAATAGTTTTCAGATCAATCAACGTCGGGGTCATTAATTGATTACGGAATATCGTAGGTGGTACTCGAGATAGAGCATCTGCTGCCTTATTTTCCAAGTCGGTCTTATATACTACCTCGAAGGAATAGCCAAGCAATTTTGCAATCCCCTTCTGATATTGTGGCTGTATCACCCTTTGTTAAAGTAAAAATTTAAGAAAATACTGGTCAGTCTTGACTATGAACTGCGTTCCGATCAAATATGGCCGCCAACGTTGCACCGCCAACACTACTGCCATCAACTCCCTCTCATAAACCGGCTTGGCTCAGTCCCTCATTGCCAACGTGTGGCTACAGAAAGCAATAGGTCTCTTGTTCTGCATCAGCACCGCTCCCACTCCATACCCAGATGCGTATGTTTCTACTTCAAACAGTATATTGAAATCGAGTAAAGCTAATACTGGCAGAGTCATCATAATGCCCGGTAACTTTAGGAAAGCTTTCTGAGCCTCACCATTCCATTTAAAAGACCCCAACTTTAATAACTTAGTTAAAAGTGCTGCAATTGAACCATAATGTTGTACAAATCGTCAATAATACCCGGTCAGTCCCAAAAATTCCCGAACTTCTCGTACATTTGTTGGAATTGGTCATTGCTTGATAGATCTTATCTTCTCCGGATCTACCTCTACTCCTTCCTCAGACAAAATATGGCCTAAATACTCCACTTTCGTATATGCGAAACTACACTTCTTTTTGTTAGCATACAACTTGTGAGTTCTCAACACTTCTAATACAAACTCCACATGTTGACAATGTTCTTCTACCCCTCTACTATAAATCAGGAAACCATCAAAGAAGACAAGGACAAATTTCCTCAAATATGATATGAAAATACTGTTCATTAAGGACTGAAAAGTTGTTGGTGCATTAGTTAGCCCAAAAGGTATTACTAGAAATTCATAATGTTGTGTTCTAAATGCTGTTTTTTCTATATCTTGGTTACACATCCTAATTTGGTGATAACCAAATTTAAGATCAATTTTAGAAAAAAAAATTGCACCATTTAATTCATCAAACAACTCCTCAATAACAGGGATAGGGAACTTATCTGGAATTGTTACGTTATTGAGCGCCGGGGTAGTCAACACAAAACCTCCAACTCCCATCTTTTTTTTCTCACCAAAAGCACCGGACTCGAATAAGGACTTGTACTGGGACGAATAATTCCAGACGATAATATTTCATCTACTAGTTTCTCCATCTCTTCCTTCTGTTGAAACATGTACCTATACGGTCTAACGTTTACTAGATCTGTTCCTCCCTTCAGGTGTATATAATGCTTGATATCCCTCCTTGGGGGTAATTCTTCCGGCCACTCGAACACATCCTTATACCGTGCTAACACAGATTGAACTTTCTCCTGCCTTGTACTTGCCGTTTCCTCTTCCTGTCGGCCAATATCAATAATCCTTGCTTCCAAGGCTCTTCATTCCACCAAATATCCTTGGTCCGAATCGGTCTAAGACTTCTTCAAACTCTTCAAACTAACTTGAGTGTTTGTTACATTGGATCCCCCTTAATTATCACCTTCCTGTTTTCATGAAAGAAGGTCATGGTAAGGTTTTTCCAATCCATTTCAGTGACCCCTAAGAAGTATAGTCATTGCATCCCAAGTATTACATCCACCCCTCCTAACTCCAATGGCAAAAAATTCTCTATTACTTCCCAACCGTCAAGGTCAACTTCCACCTTCTCACATATCCCCTTCCCTTTAATGGTAGTTCCCGATCCAAGAATAACTCCATAATTGGAGGTATCCTTTGTGTTCAACTTCAGCATTGACACCAACTTGTCTGAAATAAAATTATGCGTGGCTATGCAGTCGATCAACACAATGACTTCCCTTCCTTGAATTTTTCCTCTAACTTTCATGGTACCAGGATTCATCAGCCCCACCATCGAATTAATACATAATTCGACTACCCCTTCTATTTTGCTTTTCAACTCCATAGTGCACAACTCCTTTTGGCTCATATACGTTTTCCTCTATAATTTATTCTTCTACGTTATCTGCTCTGACCAGAAACATTCGTAGCTCCCTTGTTTCTTTTGCCTTACATTTATGCCCCGAGTAGTATTTCTCATCACATTTAAAACACAATCCATTCTCTCTCCTGGCCTGAAATTCGGCATCTGATAAACGCTTAGATGGCCCTTCCTTTTTATTCTCATTGGTCGTTGATCTTCTCAATGTAATGGTTCTTATCATAAATACAGTGTTACCTCTGTTTTCGTGATAATTATTTGTAGCATTCGACTTAGTATGAACATAGGGGTAATTTGGGAATTTCGTTCCAACATATCCTGGTAAATTTGCTTCCCTCCTTAAAATCTCCCTATTCTCTACCATCTGAGCGTACTGCATCATTTTTTATAACCCCACCGGTTGACAAAACTCTACTTCTACCTTGATCCACGGTAACAACCATAACTCTCTCATAAAGGTTTCTTCCACAATTTTCTTCTGAATATTCGATAAAGTGGCAACCAATTTATCGAAAAGATTCTGATATTCATCTGCAACCAATTTAAACGAATTTCTTTTACTTTCCAGGCAATTAAAAATCTATGTACATATGATAGTGAAGGTTCACATGTATTCACCCTCCAGTCATAGATTGATAATTTGTAATTCGTTAGAAACTCTTAGTGAATTTCTCTTTTTTTTTTTAACTGTAAAAACTTAAGCAAATTCTTGTAATGTTTTCTACCTCATCCTTGTAATTGGCCTTTCCTTAATTTTCAAAGGTTTAAATCTCCATGCCCAAACATCTATTGTCAAATTAAAAGGAATAGAGTTGAATTTTAGGAAAGCTTGTACTAATTCTAGTGGAGTTATATCTCTTAAATAGTAAACTAGAGCCTTGTGTTTTCATGGCTTTTATGGATATACATACCCACATGCATATCCACATGCATACGCACATACGCACATACATACATCATACACATACGCACATACATACATCATACACATATACATATATACACACACATACATATACATATACATATATATATATATATATATATAATATAGTATTCACTTTTGCCAATTATTGTGGAATGAAATACTCCCTCAGATTAATGTGTCATAATTTGGATCCTCACCATTGCTTGTTTTCTGATTAGCAGTCCACAACTAGTAGGTGTTAGACATCCATTTTATGGTTCATTTAGTTGATATCTCCAAGTTATCTATTTTGTTGACTCATTATGTGAGGGTTCTATTTATTTTGGAAATATTAATAAGGGCTTTGTGGTAATTATCTAAGTGTGCTTTTGGTTATAAACGGAGGGTGTTAGGTGTCATAACCGCAACCTTTCAAACACGAAACGAGCGATTGTGCGGCACTTGTTCGATCCTATCAACAAGTTAGCCGATCAAAATCTGAAATTCGTAGACAAACTTAACGTACGATTCAACCTCCCCTCACGTTTTTGGAAAATGTTTTATAGAATGTGGGAGAGAAATAAATTCATTAAAATTGTTGTTAAAACAAGCATTGAAGATTGTCAATTGCAATAAGAAAGCATAAATTGCAAAGAGTGCGACAAGGCTTGGACGGAGATTCAACTACTATGTATCCCCTATAGTACATTTTGAACATTTTCAACTCTGGTAGGCTTGCATATGAAAATGCCGAAACGTCACACCTATGCTTTATGACTTAAAATGAAAGCAACTAGCTAAAATATGTACAAAACATAAAGACAAGATAAATTGGGGGTATTCGAAGCATACAGCCATAGGTAAACACACCCTGGACAAGTATGTCCGTTGGACTAGGGACCTTAGAAGGGAGGAGTGGTTTTGGCATTATCTAGTTTTGGGACCTTGAGAAAGAGATATCCCTCCCGAAATGCAATTGCAATATTGTAGTTTTCTTTTATGTTAGTACGTTGTGATTTGAGTGAACTAGGTTTTGAGGGAGATCTCAAGTCGAATGGTGAAAGTACTTTGAATTGCTTGTTTGTGTTGTAGTTCTTAATATTACAATATGTTTGTTTGTTACCTATATATTTTCTTTATATGAATACCTAACGCATTGTCACTAATATACTCGTTGTTACTGTCTACAGATACTCGTTCCTCTCACAGTTCCTCACAGCCTTAAGATTGTACATACTTGCAAGTCCTCTCTCTCTTCTACATGCACATTATTTATGATAACGTATAGGGTGGGAAATGCAAGTTCATGTCTACTAAGCTATGCTCATATTAACTAACAATCTTGAATATACTACTTGCTTAAATTATACATTTGTAAGTTTTAGTACCCTCCTACACCATATTTACTTGAGTTGTGAGCGAGCTTTTTTCCTTACAAATTGTGTCCGTTCATACAAATTCTTTTATTTAGTAAGAGGAGAAAGTTGGGTAAAATAAGAATTTTCATTCTAATTCTTGTAGAATAAAATGCATTTATGATAAGCATGCAAAGCAAACCATTGTTGGGTTGTAAAGACGATTCTTGCCTAAGAAGCACATGACACAAACATAGATACGATAAGATACAATGATCTGCCAGTTTTTTAA

mRNA sequence

ATGCACAGTCCGGAGAAATTGGATGACGATTATTCTGCCAATGAGGACAGCAACGTCTCAGCTGAATTGGAGACTTCAATTACTCTCAATGGTGATCTCCAGGAAGGAAATGATAGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTTAAAAGCCAGAACCATCTTTCATCTTCCCTTGACCGTCTTACTACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAATGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGATACTCGTTCCTCTCACAGTTCCTCACAGCCTTAA

Coding sequence (CDS)

ATGCACAGTCCGGAGAAATTGGATGACGATTATTCTGCCAATGAGGACAGCAACGTCTCAGCTGAATTGGAGACTTCAATTACTCTCAATGGTGATCTCCAGGAAGGAAATGATAGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTTAAAAGCCAGAACCATCTTTCATCTTCCCTTGACCGTCTTACTACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAATGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGATACTCGTTCCTCTCACAGTTCCTCACAGCCTTAA

Protein sequence

MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP

Homology

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BLAST of CsaV3_4G031800 vs. NCBI nr
Match: XP_004144641.1 (PREDICTED: uncharacterized protein LOC101218072 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 3.6e-75
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN
Sbjct: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP 155
           SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP
Sbjct: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP 154

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BLAST of CsaV3_4G031800 vs. NCBI nr
Match: XP_008444284.1 (PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444285.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444286.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 7.7e-70
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MH PEKLDDDYSANEDSNVSAELETSI+  GDLQEGND ENKNLGNSNALANGLSSMLIN
Sbjct: 1   MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP 155
           SILRTIQRR+DNIDRAITMGNLPDTRSS +SSQP
Sbjct: 121 SILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP 154

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BLAST of CsaV3_4G031800 vs. NCBI nr
Match: XP_023535159.1 (uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535161.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535162.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.9 bits (585), Expect = 5.7e-57
Identity = 129/153 (84.31%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MHSPEK+ DD  ANEDSNVS ELETSI+ NG LQE ND  N NL NSNALANGLSSMLIN
Sbjct: 1   MHSPEKVLDD-PANEDSNVSVELETSISRNGGLQEENDLANTNLENSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQ+ LSSSLDR+T ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRITIELDQLLEDAPFPFIMQHASRISSVRKRVLSLN 120

Query: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQ 154
           SILR+IQRR+DNIDRAI+MGN PDT SS SSSQ
Sbjct: 121 SILRSIQRRLDNIDRAISMGNRPDTLSSQSSSQ 152

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BLAST of CsaV3_4G031800 vs. NCBI nr
Match: XP_022936774.1 (uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata] >XP_022936775.1 uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata])

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 127/153 (83.01%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MHSPEK+ DD  ANEDS+VS ELETSI+ NGDL+E ND  N NL NSNALANGLSSMLIN
Sbjct: 1   MHSPEKVLDD-PANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQ+ LSSSLDR+TTELDQLLE APFPFIMQHASRIS+VRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLN 120

Query: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQ 154
           SIL +IQRR+DNIDRAI+MGN PDT SS SSSQ
Sbjct: 121 SILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQ 152

[Close]

BLAST of CsaV3_4G031800 vs. NCBI nr
Match: XP_022976873.1 (uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976875.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976876.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976877.1 uncharacterized protein LOC111477110 [Cucurbita maxima])

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 126/153 (82.35%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MHSPEK+ DD  ANEDS+ S ELETSI+ NG+L+E ND  N NL NSNALANGLSSMLIN
Sbjct: 1   MHSPEKVLDD-PANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQ+ LSSSLDR+TTELDQLLEDAPFPFIMQHASRIS+VRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLN 120

Query: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQ 154
           SILR+IQRR+DNIDRAI+MGN PDT SS S SQ
Sbjct: 121 SILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQ 152

[Close]

BLAST of CsaV3_4G031800 vs. TAIR10
Match: AT1G79070.1 (SNARE-associated protein-related)

HSP 1 Score: 118.2 bits (295), Expect = 4.4e-27
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 0


Query: 13  ANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLINIIRDFDSKADDT 72
           ++ D   SA+  TS   +   ++G        G   A+A GLS+ML ++I+DFDSKA DT
Sbjct: 5   SDSDHRDSADATTSSCQSTTAEDGQCG-----GGGEAMARGLSAMLESVIKDFDSKALDT 64

Query: 73  LKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRMDN 132
           L SQ+ LS SLDRL  ELDQLLE+AP PFI+QHASRIS+V++RV SLN +L+++QRR+DN
Sbjct: 65  LNSQDELSGSLDRLVQELDQLLENAPLPFIVQHASRISSVKQRVSSLNLVLKSVQRRIDN 124

Query: 133 IDRAITMGNLPDTRSSHSS 152
           ID  ++     +  SS ++
Sbjct: 125 IDHMLSANTTQEKASSETT 138

[Close]

BLAST of CsaV3_4G031800 vs. TrEMBL
Match: tr|A0A1S3BAU4|A0A1S3BAU4_CUCME (uncharacterized protein LOC103487651 OS=Cucumis melo OX=3656 GN=LOC103487651 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.1e-70
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MH PEKLDDDYSANEDSNVSAELETSI+  GDLQEGND ENKNLGNSNALANGLSSMLIN
Sbjct: 1   MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP 155
           SILRTIQRR+DNIDRAITMGNLPDTRSS +SSQP
Sbjct: 121 SILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP 154

[Close]

BLAST of CsaV3_4G031800 vs. TrEMBL
Match: tr|A0A0A0L459|A0A0A0L459_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G598520 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-52
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60
           MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN
Sbjct: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV 113
           IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV 112

[Close]

BLAST of CsaV3_4G031800 vs. TrEMBL
Match: tr|A0A2C9VRM9|A0A2C9VRM9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G171200 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32
Identity = 87/155 (56.13%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 9   DDYSANEDSN--VSAELETSITLNG------DLQEGNDSE----NKNLGNSNALANGLSS 68
           D  + +E++N  VS ++  S++ NG      ++ +G+ SE    N+N  +S+ALA GLS+
Sbjct: 6   DRCNPSEENNVAVSVQIAPSVSSNGNNDPSENIPQGHQSEPNADNENNRSSDALAKGLST 65

Query: 69  MLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRV 128
           ML +IIRDFDSKA DTLKSQ+HL+ ++DRLT ELDQLLEDAP PFIMQHA++IS VRKRV
Sbjct: 66  MLASIIRDFDSKAQDTLKSQDHLNCAIDRLTRELDQLLEDAPLPFIMQHAAKISGVRKRV 125

Query: 129 LSLNSILRTIQRRMDNIDRAITMGNLPD-TRSSHS 151
            SLNS+L++IQRR+DNID  +++G+L D T SSH+
Sbjct: 126 SSLNSLLKSIQRRVDNIDLILSVGSLQDETSSSHA 160

[Close]

BLAST of CsaV3_4G031800 vs. TrEMBL
Match: tr|A0A067JMC1|A0A067JMC1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22666 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 81/143 (56.64%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 19  VSAELETSITLNG--DLQEGNDSENKNLGN--------SNALANGLSSMLINIIRDFDSK 78
           +S E E +++ NG  D  E N  E+K+  N        S+ALA GLS+ML N+IRDFDSK
Sbjct: 18  ISVEAERTVSSNGNKDSNEINSQEHKSKTNTEDEINKSSDALAKGLSTMLANVIRDFDSK 77

Query: 79  ADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQR 138
           A +TLKSQ+ L+S++DRLT ELDQLLEDAP PFIMQHA++IS V+KRV SLNS+L++IQR
Sbjct: 78  AQETLKSQDQLNSAIDRLTRELDQLLEDAPLPFIMQHAAKISGVKKRVSSLNSLLKSIQR 137

Query: 139 RMDNIDRAITMGNLPDTRSSHSS 152
           R+DN+DR +++G L +   S SS
Sbjct: 138 RIDNMDRMLSVGVLQEKTHSGSS 160

[Close]

BLAST of CsaV3_4G031800 vs. TrEMBL
Match: tr|A0A2C9VU29|A0A2C9VU29_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G170400 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 79/148 (53.38%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 9   DDYSANEDSN--VSAELETSITLNG------DLQEGNDSE----NKNLGNSNALANGLSS 68
           D  + +ED+   VS ++  S++ NG      ++ +G+  E    N+N  +S+A A GLS+
Sbjct: 6   DRCNPSEDNTVAVSVQIAPSVSSNGNNDPSENIPQGHQCEPNANNENNRSSDAFAKGLST 65

Query: 69  MLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRV 128
           ML +IIRDFDSKA DTLKSQ++L+ ++DRL  ELDQLLEDAP PFIMQHA++IS VRKRV
Sbjct: 66  MLASIIRDFDSKAQDTLKSQDYLNCAIDRLARELDQLLEDAPLPFIMQHAAKISGVRKRV 125

Query: 129 LSLNSILRTIQRRMDNIDRAITMGNLPD 145
            SLNS+L++IQRR+DNID  +++G+L D
Sbjct: 126 SSLNSLLKSIQRRVDNIDLILSVGSLQD 153

The following BLAST results are available for this feature:

BLAST of CsaV3_4G031800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144641.1	3.6e-75	100.00	PREDICTED: uncharacterized protein LOC101218072 [Cucumis sativus]	[more]
XP_008444284.1	7.7e-70	94.81	PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444285.1 P...	[more]
XP_023535159.1	5.7e-57	84.31	uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160....	[more]
XP_022936774.1	1.1e-55	83.01	uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata] >XP_0229367...	[more]
XP_022976873.1	1.1e-55	82.35	uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharac...	[more]

BLAST of CsaV3_4G031800 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79070.1	4.4e-27	48.92	SNARE-associated protein-related	[more]

BLAST of CsaV3_4G031800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G031800 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BAU4\|A0A1S3BAU4_CUCME	5.1e-70	94.81	uncharacterized protein LOC103487651 OS=Cucumis melo OX=3656 GN=LOC103487651 PE=...	[more]
tr\|A0A0A0L459\|A0A0A0L459_CUCSA	3.6e-52	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G598520 PE=4 SV=1	[more]
tr\|A0A2C9VRM9\|A0A2C9VRM9_MANES	4.2e-32	56.13	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G171200 PE=4 SV=...	[more]
tr\|A0A067JMC1\|A0A067JMC1_JATCU	1.3e-30	56.64	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22666 PE=4 SV=1	[more]
tr\|A0A2C9VU29\|A0A2C9VU29_MANES	1.3e-28	53.38	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G170400 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0031083	BLOC-1 complex

Vocabulary: **INTERPRO**
Term	Definition
IPR017246	Snapin
IPR028119	Snapin/Pallidin/Snn1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0031083	BLOC-1 complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G031800.1	CsaV3_4G031800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
IPR028119	Snapin/Pallidin/Snn1	PFAM	PF14712	Snapin_Pallidin	coord: 49..133 e-value: 1.6E-22 score: 79.6
IPR017246	Snapin	PANTHER	PTHR31305	FAMILY NOT NAMED	coord: 37..149

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G031800	CSPI04G21470	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G031800	Cucsa.059010	Cucumber (Gy14) v1	cgycucB045
CsaV3_4G031800	CmaCh09G007450	Cucurbita maxima (Rimu)	cmacucB0032
CsaV3_4G031800	CmaCh01G012990	Cucurbita maxima (Rimu)	cmacucB0556
CsaV3_4G031800	CmoCh09G007370	Cucurbita moschata (Rifu)	cmocucB0019
CsaV3_4G031800	CmoCh01G013540	Cucurbita moschata (Rifu)	cmocucB0543
CsaV3_4G031800	Cp4.1LG02g02330	Cucurbita pepo (Zucchini)	cpecucB0710
CsaV3_4G031800	Cp4.1LG06g05840	Cucurbita pepo (Zucchini)	cpecucB0973
CsaV3_4G031800	CsGy4G020010	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G031800	Carg14772	Silver-seed gourd	carcucB0343
CsaV3_4G031800	Carg20060	Silver-seed gourd	carcucB1093
CsaV3_4G031800	Cla023222	Watermelon (97103) v1	cucwmB367
CsaV3_4G031800	MELO3C010559	Melon (DHL92) v3.5.1	cucmeB325
CsaV3_4G031800	ClCG11G016330	Watermelon (Charleston Gray)	cucwcgB288
CsaV3_4G031800	Lsi04G018700	Bottle gourd (USVL1VR-Ls)	cuclsiB304
CsaV3_4G031800	MELO3C010559.2	Melon (DHL92) v3.6.1	cucmedB318
CsaV3_4G031800	Cla97C11G222290	Watermelon (97103) v2	cucwmbB281
CsaV3_4G031800	Bhi09G003028	Wax gourd	cucwgoB426

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None