CsaV3_4G031160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G031160
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionE3 ubiquitin-protein ligase synoviolin B-like
Locationchr4 : 21339089 .. 21339784 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCCCAATCACTTTCTCCTTCCAATGCTCTATTCGCCGCAACGGCAAGAGCAGTCTTGCCACCGACGGTCAACCGTTGCAATTCGTCCAACTCCGTTTGAGGCACTTCGGCCAATTGGTTCATACACCTTCCCAGCAAATCCTTCAACAAACTTCCCCCACTTTAATTTCCGATACTCTGATCCCTTTCTCTCTGTGGGAGCTTGAAGATCCACCTTTCATCTCCTACTTCTTCCTCTTTCGTTTTCTCTCTTCCTACGATATCTCCGCCGCCGTCTGTGACGCCATCTTCTACAATATTTCCTCCTTTGCTGGTCAAATATTATTGGCCGCCGATAGCAACATAAATGTCAACTTCCACATCATAGCCGATGTGGATATCGTGTACACGCACTGGGTGGACCTGGACCCAGCAGAAGATGCCCCGGCGGTAAGGAAAGGGGCGTCAACATCGGTGATTGAGAGGGTGATGAAGGAGAAATATGATGGGAATGGAGGGGAAGAGAAGGAAGGTGATGATCAATGCAGTGTTTGTTATGAACAACTGTATGGAAAAAGAGAGAATGAAAACGAAAAGGAAAAGGAAGTGAGCAGAATCCCATGCGGGCACATGTATCATAAGTCATGCATTCTCAAATGGCTTAAAATCAGCAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGAATAA

mRNA sequence

ATGTCTCTCCCAATCACTTTCTCCTTCCAATGCTCTATTCGCCGCAACGGCAAGAGCAGTCTTGCCACCGACGGTCAACCGTTGCAATTCGTCCAACTCCGTTTGAGGCACTTCGGCCAATTGGTTCATACACCTTCCCAGCAAATCCTTCAACAAACTTCCCCCACTTTAATTTCCGATACTCTGATCCCTTTCTCTCTGTGGGAGCTTGAAGATCCACCTTTCATCTCCTACTTCTTCCTCTTTCGTTTTCTCTCTTCCTACGATATCTCCGCCGCCGTCTGTGACGCCATCTTCTACAATATTTCCTCCTTTGCTGGTCAAATATTATTGGCCGCCGATAGCAACATAAATGTCAACTTCCACATCATAGCCGATGTGGATATCGTGTACACGCACTGGGTGGACCTGGACCCAGCAGAAGATGCCCCGGCGGTAAGGAAAGGGGCGTCAACATCGGTGATTGAGAGGGTGATGAAGGAGAAATATGATGGGAATGGAGGGGAAGAGAAGGAAGGTGATGATCAATGCAGTGTTTGTTATGAACAACTAAGGGAATTAGAAGAATAA

Coding sequence (CDS)

ATGTCTCTCCCAATCACTTTCTCCTTCCAATGCTCTATTCGCCGCAACGGCAAGAGCAGTCTTGCCACCGACGGTCAACCGTTGCAATTCGTCCAACTCCGTTTGAGGCACTTCGGCCAATTGGTTCATACACCTTCCCAGCAAATCCTTCAACAAACTTCCCCCACTTTAATTTCCGATACTCTGATCCCTTTCTCTCTGTGGGAGCTTGAAGATCCACCTTTCATCTCCTACTTCTTCCTCTTTCGTTTTCTCTCTTCCTACGATATCTCCGCCGCCGTCTGTGACGCCATCTTCTACAATATTTCCTCCTTTGCTGGTCAAATATTATTGGCCGCCGATAGCAACATAAATGTCAACTTCCACATCATAGCCGATGTGGATATCGTGTACACGCACTGGGTGGACCTGGACCCAGCAGAAGATGCCCCGGCGGTAAGGAAAGGGGCGTCAACATCGGTGATTGAGAGGGTGATGAAGGAGAAATATGATGGGAATGGAGGGGAAGAGAAGGAAGGTGATGATCAATGCAGTGTTTGTTATGAACAACTAAGGGAATTAGAAGAATAA

Protein sequence

MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISDTLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVNFHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVCYEQLRELEE
Homology
[Close]
BLAST of CsaV3_4G031160 vs. NCBI nr
Match: KGN54851.1 (hypothetical protein Csa_4G551140 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 2.1e-98
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60
           MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120
           TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180
           FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC
Sbjct: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180

Query: 181 YEQL 185
           YEQL
Sbjct: 181 YEQL 184

[Close]
BLAST of CsaV3_4G031160 vs. NCBI nr
Match: XP_011650219.1 (PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus] >KGN63362.1 hypothetical protein Csa_2G432790 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 133/184 (72.28%), Postives = 146/184 (79.35%), Query Frame = 0 

Query: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60
           MS P TFSF+CSIR N   S AT+GQPLQFV+LRL HF QLV +PS QILQQTSP LISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120
           TLI F L ELEDPPFIS+  L RFLSSY+IS AVCDAIF  ISSFA Q++     N+N N
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVA---GNLNSN 120

Query: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180
           FHIIA +D VYTHWVDLDPAEDA AVR+GA  S IER+MKEKYDGNGGEE E  D+CSVC
Sbjct: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEME--DECSVC 179

Query: 181 YEQL 185
           YE L
Sbjct: 181 YEDL 179

[Close]
BLAST of CsaV3_4G031160 vs. NCBI nr
Match: XP_023533113.1 (RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 96/187 (51.34%), Postives = 120/187 (64.17%), Query Frame = 0 

Query: 6   TFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISDTLIPF 65
           + SFQCS R N   +LA+  QP+QFV+LRL H   L+   S+QILQQT  T + D L PF
Sbjct: 8   SLSFQCSFRTNTTGNLASHEQPMQFVELRLGHSSHLISRSSRQILQQTPSTPMGDALFPF 67

Query: 66  SLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVNFHIIA 125
            L +L DPPF+S   + RFLSS+ I  AVC+ IF  ISSFA   L  A  N+++NFHI+ 
Sbjct: 68  ILRDLLDPPFLSKSHVLRFLSSFTIPIAVCNIIFAEISSFA---LHLAAGNVDLNFHIVV 127

Query: 126 DVDIVYTHWVDLDP---AEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVCYE 185
           DVD +   WVDLDP    E +PA   GA  S IER+ ++K+DG   EEKEGD  CSVC E
Sbjct: 128 DVDAIEMIWVDLDPFLIEEYSPAAMNGAPASAIERLQRQKFDGLREEEKEGD--CSVCCE 187

Query: 186 QLRELEE 190
            L+  EE
Sbjct: 188 ALKGEEE 189

[Close]
BLAST of CsaV3_4G031160 vs. NCBI nr
Match: XP_023006824.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 154.8 bits (390), Expect = 2.9e-34
Identity = 90/187 (48.13%), Postives = 119/187 (63.64%), Query Frame = 0 

Query: 6   TFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISDTLIPF 65
           + SFQ SIR N   +LA+   P+QFV+LRL H   L+   S+QILQQ+  T + ++L PF
Sbjct: 8   SLSFQFSIRTNTTGTLASHEHPMQFVELRLGHSSHLISRSSRQILQQSPSTPLGESLFPF 67

Query: 66  SLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVNFHIIA 125
            L +LE PPF+  + +  FLSS+ I  A CD I+  ISSFA  + L AD N+++NFHI+ 
Sbjct: 68  ILRDLEHPPFLPNYHVLHFLSSFSIPVAACDIIYQEISSFA--LRLTAD-NVDLNFHIVV 127

Query: 126 DVDIVYTHWVDLDP---AEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVCYE 185
           DVD +   WVDLDP    E +P    GA  S IER+ ++K+DG   EE+EGD  CSVC E
Sbjct: 128 DVDAIEMIWVDLDPFLVEEYSPPAMNGAPASAIERLQRQKFDGLREEEEEGD--CSVCCE 187

Query: 186 QLRELEE 190
            LR  EE
Sbjct: 188 ALRGEEE 189

[Close]
BLAST of CsaV3_4G031160 vs. NCBI nr
Match: XP_022947840.1 (probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata])

HSP 1 Score: 153.7 bits (387), Expect = 6.4e-34
Identity = 91/187 (48.66%), Postives = 118/187 (63.10%), Query Frame = 0 

Query: 6   TFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISDTLIPF 65
           + SFQCS R N   +LA+  QP+QFV+LRL H   L+   S+QILQQT  T + D L PF
Sbjct: 8   SLSFQCSFRTNSTGTLASHEQPMQFVELRLGHSSHLISRSSRQILQQTPSTPMGDALFPF 67

Query: 66  SLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVNFHIIA 125
            L +L  PPF+S   + RFLSS+ I  AVC+ IF  ISSFA   L  A  N+++NFHI+ 
Sbjct: 68  ILRDLLHPPFLSKSHVLRFLSSFSIPIAVCNIIFVEISSFA---LHLAAGNVDLNFHIVV 127

Query: 126 DVDIVYTHWVDLDP---AEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVCYE 185
           DVD +   WVDLDP    E +P    GA  S IER+ ++++DG   EE+EG  +CSVC E
Sbjct: 128 DVDAIEMIWVDLDPFLIEEYSPPAMNGAPASAIERLQRQEFDGL-REEEEG--ECSVCCE 187

Query: 186 QLRELEE 190
            L+  EE
Sbjct: 188 ALKGEEE 188

[Close]
BLAST of CsaV3_4G031160 vs. TrEMBL
Match: tr|A0A0A0L3Z2|A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.4e-98
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60
           MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120
           TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180
           FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC
Sbjct: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180

Query: 181 YEQL 185
           YEQL
Sbjct: 181 YEQL 184

[Close]
BLAST of CsaV3_4G031160 vs. TrEMBL
Match: tr|A0A0A0LRB0|A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.7e-62
Identity = 133/184 (72.28%), Postives = 146/184 (79.35%), Query Frame = 0 

Query: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60
           MS P TFSF+CSIR N   S AT+GQPLQFV+LRL HF QLV +PS QILQQTSP LISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120
           TLI F L ELEDPPFIS+  L RFLSSY+IS AVCDAIF  ISSFA Q++     N+N N
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVA---GNLNSN 120

Query: 121 FHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVC 180
           FHIIA +D VYTHWVDLDPAEDA AVR+GA  S IER+MKEKYDGNGGEE E  D+CSVC
Sbjct: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEME--DECSVC 179

Query: 181 YEQL 185
           YE L
Sbjct: 181 YEDL 179

[Close]
BLAST of CsaV3_4G031160 vs. TrEMBL
Match: tr|A0A1S3CR16|A0A1S3CR16_CUCME (E3 ubiquitin-protein ligase synoviolin B-like OS=Cucumis melo OX=3656 GN=LOC103503717 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30
Identity = 98/194 (50.52%), Postives = 120/194 (61.86%), Query Frame = 0 

Query: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60
           MS   T S +C I     SS+AT     Q V++RLR + +LV   S QI+QQT PT ISD
Sbjct: 1   MSSTTTLSLECCIH----SSVATTADE-QLVEIRLRRYSKLVSPSSNQIIQQTFPTPISD 60

Query: 61  TLIPFSL--WELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNIN 120
            L  F L   ELE+PPF  +  L +FLS  D +     AIF+NISSFA Q+   A  N+N
Sbjct: 61  ALFHFPLPELELENPPFFFHDLLLQFLSPADST-----AIFHNISSFALQL---AAGNLN 120

Query: 121 VNFHIIADVDIVYTHWV--DLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQ 180
           +NFH+IA VD++YT  V  DLDP + +P VR GA  SVIER+M EKYD   G E+ G DQ
Sbjct: 121 LNFHLIATVDLLYTISVDLDLDPPQYSPLVRNGAPASVIERLMDEKYDDGNGREEMG-DQ 180

Query: 181 CSVCYEQLR-ELEE 190
           C VCYE L  E EE
Sbjct: 181 CCVCYEDLNCEREE 180

[Close]
BLAST of CsaV3_4G031160 vs. TrEMBL
Match: tr|A0A0A0LHI3|A0A0A0LHI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889100 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 90/194 (46.39%), Postives = 116/194 (59.79%), Query Frame = 0 

Query: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60
           MS     S  C +R     S+ T     Q V++RLR F +LV   S Q +QQT PT IS+
Sbjct: 1   MSSTTNLSLDCCVR-----SIPTTADK-QLVEIRLRRFSKLVSPFSNQNIQQTFPTSISN 60

Query: 61  TLIPFSLWELE-DPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINV 120
            L  F L ELE + P + + FL +FLS  D +     AIF+NISSFA Q+   A  N+N+
Sbjct: 61  ALFHFPLPELELENPSLFHDFLLQFLSPADSA-----AIFHNISSFALQL---AAGNLNL 120

Query: 121 NFHIIADVDIVYTHWV--DLDPAEDAPAVRKGASTSVIERVMKEKY-DGNGGEEKEGDDQ 180
           NFH+IA VD++YT  +  +L+P + +P VR G   SV+ER+M EKY DGNGGE   G  Q
Sbjct: 121 NFHLIATVDLLYTISINLNLNPPQYSPPVRNGVPASVMERLMNEKYDDGNGGEGMGG--Q 178

Query: 181 CSVCYEQLR-ELEE 190
           C VCYE L  E EE
Sbjct: 181 CCVCYEDLNCEREE 178

[Close]
BLAST of CsaV3_4G031160 vs. TrEMBL
Match: tr|A0A0A0LHS2|A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-08
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 0 

Query: 49  ILQQTSPTLISDTLIPFSLWELEDP--PFISYFFLFRFLSSYDISAAVCDAIFYNISSFA 108
           IL+QT  TLI + L  FSL  L+ P       + +  FL S+++ ++VC  + +NI SFA
Sbjct: 47  ILEQTPFTLIGEAL--FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFA 106

Query: 109 GQILLAADSNINVNFHIIADVDIVYTHWVDLDP---------AEDAPAVRKGASTSVIER 168
            Q     D N N  F I  +VD +  +W +  P          E  P   +GAS S IER
Sbjct: 107 QQF----DIN-NECFKIETNVDYIKEYWTEAAPELYPISTVGEEGLPP--RGASESAIER 166

Query: 169 VMKEKYDGNGGEEKEGDDQCSVCYEQLR 186
           V K+K+DG  GEE+E    CSVC E+++
Sbjct: 167 VKKQKFDGFRGEEEEEIGDCSVCCEEIK 185

The following BLAST results are available for this feature:
BLAST of CsaV3_4G031160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54851.12.1e-98100.00hypothetical protein Csa_4G551140 [Cucumis sativus][more]
XP_011650219.15.5e-6272.28PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus] >KGN63362.1 hypot... [more]
XP_023533113.12.1e-3751.34RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo][more]
XP_023006824.12.9e-3448.13RING-H2 finger protein ATL16-like [Cucurbita maxima][more]
XP_022947840.16.4e-3448.66probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata][more]
BLAST of CsaV3_4G031160 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3Z2|A0A0A0L3Z2_CUCSA1.4e-98100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1[more]
tr|A0A0A0LRB0|A0A0A0LRB0_CUCSA3.7e-6272.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1[more]
tr|A0A1S3CR16|A0A1S3CR16_CUCME1.3e-3050.52E3 ubiquitin-protein ligase synoviolin B-like OS=Cucumis melo OX=3656 GN=LOC1035... [more]
tr|A0A0A0LHI3|A0A0A0LHI3_CUCSA1.4e-2446.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889100 PE=4 SV=1[more]
tr|A0A0A0LHS2|A0A0A0LHS2_CUCSA2.3e-0837.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G031160.1CsaV3_4G031160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G031160CSPI04G20690Wild cucumber (PI 183967)cpicucB212
CsaV3_4G031160Cucsa.357530Cucumber (Gy14) v1cgycucB543
CsaV3_4G031160CmoCh03G001250Cucurbita moschata (Rifu)cmocucB0782
CsaV3_4G031160CsGy4G019420Cucumber (Gy14) v2cgybcucB171
CsaV3_4G031160Lsi01G019550Bottle gourd (USVL1VR-Ls)cuclsiB279
CsaV3_4G031160Cla97C04G069460Watermelon (97103) v2cucwmbB306
CsaV3_4G031160Bhi03G002247Wax gourdcucwgoB403
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G031160Cucurbita maxima (Rimu)cmacucB0799
CsaV3_4G031160Cucurbita maxima (Rimu)cmacucB1018
CsaV3_4G031160Cucurbita moschata (Rifu)cmocucB1001
CsaV3_4G031160Cucurbita pepo (Zucchini)cpecucB0076
CsaV3_4G031160Cucurbita pepo (Zucchini)cpecucB0613
CsaV3_4G031160Melon (DHL92) v3.5.1cucmeB336
CsaV3_4G031160Melon (DHL92) v3.6.1cucmedB329
CsaV3_4G031160Watermelon (Charleston Gray)cucwcgB319
CsaV3_4G031160Watermelon (97103) v1cucwmB357
CsaV3_4G031160Watermelon (97103) v2cucwmbB308
CsaV3_4G031160Wax gourdcucwgoB414
CsaV3_4G031160Silver-seed gourdcarcucB0314
CsaV3_4G031160Silver-seed gourdcarcucB0898