Lsi01G019550 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G019550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Unknown protein
Location	chr01 : 25374850 .. 25375544 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCCGTACAACTCTGTCCCTCCGATATTGTATTCGCAGCAACCCCAACGGCAGCGTGGCCTCCGACGATCAACCATTGCAATTCGTTGAACTCCGATTGAGGTGTTTCAGAGAGTCAGTGTTTACACCTTCTCACCAAATCCTCCAACAAACTTCCCCAACTCTAATTTCCGATGCTCTGTTTCCGTTCCCTCTGCGAGAGCTTGAAGACCCACCCTTCCTCTCCCACTTCTTCCTCCTTCGCTTTCTCTCTTCCTTCCACCTCCCCGAGGCCGCATGTAACGCCATCTTCCACAAGATCTCCTCCTTCGCCCTCCGAATGGCCGCCGGCAACCTCAATCTCAACTTCCATATCATCGTCGCTATCGATTTTGTGCATACGCTCTGGGTGGACCTGGACCCAGCAGTGCTTGTTCCACAAGATTCGCCGCCGGTGAGAAAAGGGGCGCCAGCATGGGTGATGGAGCGGGTAATGAAGGAGAAATATGATGGGAATGGACGGGAAGAGGAGGGAGATCAGTGCAGCGTTTGTTATGAGGAACTCCATGGGGAAAAGGAGGAGGTGACAAGAATGCCGTGTGGGCATGTGTATCATAAGTCGTGTATCCTCAAATGGCTTAAGATCAATAATTCATGTCCTTTGTGCAGAAGGGAATTAGAATGAAGAATAAGACAAAATCCAAATCCTGA

mRNA sequence

ATGTCTTTCCGTACAACTCTGTCCCTCCGATATTGTATTCGCAGCAACCCCAACGGCAGCGTGGCCTCCGACGATCAACCATTGCAATTCGTTGAACTCCGATTGAGGTGTTTCAGAGAGTCAGTGTTTACACCTTCTCACCAAATCCTCCAACAAACTTCCCCAACTCTAATTTCCGATGCTCTGTTTCCGTTCCCTCTGCGAGAGCTTGAAGACCCACCCTTCCTCTCCCACTTCTTCCTCCTTCGCTTTCTCTCTTCCTTCCACCTCCCCGAGGCCGCATGTAACGCCATCTTCCACAAGATCTCCTCCTTCGCCCTCCGAATGGCCGCCGGCAACCTCAATCTCAACTTCCATATCATCGTCGCTATCGATTTTGTGCATACGCTCTGGGTGGACCTGGACCCAGCAGTGCTTGTTCCACAAGATTCGCCGCCGGTGAGAAAAGGGGCGCCAGCATGGGTGATGGAGCGGGTAATGAAGGAGAAATATGATGGGAATGGACGGGAAGAGGAGGGAGATCAGTGCAGCGTTTGTTATGAGGAACTCCATGGGGAAAAGGAGGAGAAGGGAATTAGAATGAAGAATAAGACAAAATCCAAATCCTGA

Coding sequence (CDS)

ATGTCTTTCCGTACAACTCTGTCCCTCCGATATTGTATTCGCAGCAACCCCAACGGCAGCGTGGCCTCCGACGATCAACCATTGCAATTCGTTGAACTCCGATTGAGGTGTTTCAGAGAGTCAGTGTTTACACCTTCTCACCAAATCCTCCAACAAACTTCCCCAACTCTAATTTCCGATGCTCTGTTTCCGTTCCCTCTGCGAGAGCTTGAAGACCCACCCTTCCTCTCCCACTTCTTCCTCCTTCGCTTTCTCTCTTCCTTCCACCTCCCCGAGGCCGCATGTAACGCCATCTTCCACAAGATCTCCTCCTTCGCCCTCCGAATGGCCGCCGGCAACCTCAATCTCAACTTCCATATCATCGTCGCTATCGATTTTGTGCATACGCTCTGGGTGGACCTGGACCCAGCAGTGCTTGTTCCACAAGATTCGCCGCCGGTGAGAAAAGGGGCGCCAGCATGGGTGATGGAGCGGGTAATGAAGGAGAAATATGATGGGAATGGACGGGAAGAGGAGGGAGATCAGTGCAGCGTTTGTTATGAGGAACTCCATGGGGAAAAGGAGGAGAAGGGAATTAGAATGAAGAATAAGACAAAATCCAAATCCTGA

Protein sequence

MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISDALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFALRMAAGNLNLNFHIIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKYDGNGREEEGDQCSVCYEELHGEKEEKGIRMKNKTKSKS

Homology

[Close]

BLAST of Lsi01G019550 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 123/190 (64.74%), Postives = 147/190 (77.37%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS  TT S R  IR N NGS A++ QPLQFVELRL  F + V +PSHQILQQTSP LISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  ALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFALRMAAGNLNLNFHI 120
            L  FPLRELEDPPF+SH  L RFLSS+++ +A C+AIF KISSFA ++ AGNLN NFHI
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHI 120

Query: 121 IVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKYDGNGREEEGDQCSVCY 180
           I A+DFV+T WVDLDPA    +D+  VR+GAP   +ER+MKEKYDGNG EE  D+CSVCY
Sbjct: 121 IAALDFVYTHWVDLDPA----EDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCY 180

Query: 181 EELHGEKEEK 191
           E+LHG+ E++
Sbjct: 181 EDLHGKTEKE 186

[Close]

BLAST of Lsi01G019550 vs. TrEMBL
Match: A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.2e-55
Identity = 121/204 (59.31%), Postives = 148/204 (72.55%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS   T S +  IR N   S+A+D QPLQFV+LRLR F + V TPS QILQQTSPTLISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  ALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFA---LRMAAGNLNLN 120
            L PF L ELEDPPF+S+FFL RFLSS+ +  A C+AIF+ ISSFA   L  A  N+N+N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKYDGNGREEE--GDQ 180
           FHII  +D V+T WVDLDPA    +D+P VRKGA   V+ERVMKEKYDGNG EE+   DQ
Sbjct: 121 FHIIADVDIVYTHWVDLDPA----EDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQ 180

Query: 181 CSVCYEELHGEKEEKGIRMKNKTK 200
           CSVCYE+L+G++E +  + K  ++
Sbjct: 181 CSVCYEQLYGKRENENEKEKEVSR 200

[Close]

BLAST of Lsi01G019550 vs. TrEMBL
Match: A0A0A0LHI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889100 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-37
Identity = 104/192 (54.17%), Postives = 129/192 (67.19%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS  T LSL  C+RS P  +        Q VE+RLR F + V   S+Q +QQT PT IS+
Sbjct: 1   MSSTTNLSLDCCVRSIPTTA------DKQLVEIRLRRFSKLVSPFSNQNIQQTFPTSISN 60

Query: 61  ALFPFPLRELE-DPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFALRMAAGNLNLNFH 120
           ALF FPL ELE + P L H FLL+FLS      A   AIFH ISSFAL++AAGNLNLNFH
Sbjct: 61  ALFHFPLPELELENPSLFHDFLLQFLSP-----ADSAAIFHNISSFALQLAAGNLNLNFH 120

Query: 121 IIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKY-DGNGREEEGDQCSV 180
           +I  +D ++T+ ++L+  +  PQ SPPVR G PA VMER+M EKY DGNG E  G QC V
Sbjct: 121 LIATVDLLYTISINLN--LNPPQYSPPVRNGVPASVMERLMNEKYDDGNGGEGMGGQCCV 179

Query: 181 CYEELHGEKEEK 191
           CYE+L+ E+EE+
Sbjct: 181 CYEDLNCEREEE 179

[Close]

BLAST of Lsi01G019550 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08
Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = 1


Query: 47  HQILQQTSPTLISDALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFA 106
           H++L QT      +ALF   LR+L+ P F    ++ + LSS ++  AA   +  +I+S  
Sbjct: 45  HEVLHQTPRIPYHNALFYLSLRQLQSPLF----YITQILSSLNIRPAASQNMARRIASHI 104

Query: 107 LRMAAGNLNLNFHIIVAIDFVHTLWV--------DLDPAVLVPQDSPPVRKGAPAWVMER 166
           L+M   N   NFHI+  +DF+  +W+          +  V++ +  P V++G      ER
Sbjct: 105 LQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGER 164

Query: 167 VMKEKYDGNGREEEGDQCSVCYEELHGEKEE 190
           +  E+     + EE   CS+C +EL  EK E
Sbjct: 165 LRSEE-----KMEELGDCSICLDELSCEKRE 186

[Close]

BLAST of Lsi01G019550 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08
Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = 1


Query: 47  HQILQQTSPTLISDALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFA 106
           H++L QT      +ALF   LR+L+ P F    ++ + LSS ++  AA   +  +I+S  
Sbjct: 45  HEVLHQTPRIPYHNALFYLSLRQLQSPLF----YITQILSSLNIRPAASQNMARRIASHI 104

Query: 107 LRMAAGNLNLNFHIIVAIDFVHTLWV--------DLDPAVLVPQDSPPVRKGAPAWVMER 166
           L+M   N   NFHI+  +DF+  +W+          +  V++ +  P V++G      ER
Sbjct: 105 LQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGER 164

Query: 167 VMKEKYDGNGREEEGDQCSVCYEELHGEKEE 190
           +  E+     + EE   CS+C +EL  EK E
Sbjct: 165 LRSEE-----KMEELGDCSICLDELSCEKRE 186

[Close]

BLAST of Lsi01G019550 vs. NCBI nr
Match: gi|778674460|ref|XP_011650219.1| (PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 6.3e-60
Identity = 123/190 (64.74%), Postives = 147/190 (77.37%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS  TT S R  IR N NGS A++ QPLQFVELRL  F + V +PSHQILQQTSP LISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  ALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFALRMAAGNLNLNFHI 120
            L  FPLRELEDPPF+SH  L RFLSS+++ +A C+AIF KISSFA ++ AGNLN NFHI
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHI 120

Query: 121 IVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKYDGNGREEEGDQCSVCY 180
           I A+DFV+T WVDLDPA    +D+  VR+GAP   +ER+MKEKYDGNG EE  D+CSVCY
Sbjct: 121 IAALDFVYTHWVDLDPA----EDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCY 180

Query: 181 EELHGEKEEK 191
           E+LHG+ E++
Sbjct: 181 EDLHGKTEKE 186

[Close]

BLAST of Lsi01G019550 vs. NCBI nr
Match: gi|700199693|gb|KGN54851.1| (hypothetical protein Csa_4G551140 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 6.1e-55
Identity = 121/204 (59.31%), Postives = 148/204 (72.55%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS   T S +  IR N   S+A+D QPLQFV+LRLR F + V TPS QILQQTSPTLISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  ALFPFPLRELEDPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFA---LRMAAGNLNLN 120
            L PF L ELEDPPF+S+FFL RFLSS+ +  A C+AIF+ ISSFA   L  A  N+N+N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKYDGNGREEE--GDQ 180
           FHII  +D V+T WVDLDPA    +D+P VRKGA   V+ERVMKEKYDGNG EE+   DQ
Sbjct: 121 FHIIADVDIVYTHWVDLDPA----EDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQ 180

Query: 181 CSVCYEELHGEKEEKGIRMKNKTK 200
           CSVCYE+L+G++E +  + K  ++
Sbjct: 181 CSVCYEQLYGKRENENEKEKEVSR 200

[Close]

BLAST of Lsi01G019550 vs. NCBI nr
Match: gi|659132530|ref|XP_008466247.1| (PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42
Identity = 111/193 (57.51%), Postives = 136/193 (70.47%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS  TTLSL  CI S+   +  +D+Q    VE+RLR + + V   S+QI+QQT PT ISD
Sbjct: 1   MSSTTTLSLECCIHSSV--ATTADEQ---LVEIRLRRYSKLVSPSSNQIIQQTFPTPISD 60

Query: 61  ALFPFPLRELE--DPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFALRMAAGNLNLNF 120
           ALF FPL ELE  +PPF  H  LL+FLS      A   AIFH ISSFAL++AAGNLNLNF
Sbjct: 61  ALFHFPLPELELENPPFFFHDLLLQFLSP-----ADSTAIFHNISSFALQLAAGNLNLNF 120

Query: 121 HIIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKY-DGNGREEEGDQCS 180
           H+I  +D ++T+ VDLD  +  PQ SP VR GAPA V+ER+M EKY DGNGREE GDQC 
Sbjct: 121 HLIATVDLLYTISVDLD--LDPPQYSPLVRNGAPASVIERLMDEKYDDGNGREEMGDQCC 180

Query: 181 VCYEELHGEKEEK 191
           VCYE+L+ E+EE+
Sbjct: 181 VCYEDLNCEREEE 181

[Close]

BLAST of Lsi01G019550 vs. NCBI nr
Match: gi|778689036|ref|XP_011652885.1| (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 104/192 (54.17%), Postives = 129/192 (67.19%), Query Frame = 1


Query: 1   MSFRTTLSLRYCIRSNPNGSVASDDQPLQFVELRLRCFRESVFTPSHQILQQTSPTLISD 60
           MS  T LSL  C+RS P  +        Q VE+RLR F + V   S+Q +QQT PT IS+
Sbjct: 1   MSSTTNLSLDCCVRSIPTTA------DKQLVEIRLRRFSKLVSPFSNQNIQQTFPTSISN 60

Query: 61  ALFPFPLRELE-DPPFLSHFFLLRFLSSFHLPEAACNAIFHKISSFALRMAAGNLNLNFH 120
           ALF FPL ELE + P L H FLL+FLS      A   AIFH ISSFAL++AAGNLNLNFH
Sbjct: 61  ALFHFPLPELELENPSLFHDFLLQFLSP-----ADSAAIFHNISSFALQLAAGNLNLNFH 120

Query: 121 IIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKY-DGNGREEEGDQCSV 180
           +I  +D ++T+ ++L+  +  PQ SPPVR G PA VMER+M EKY DGNG E  G QC V
Sbjct: 121 LIATVDLLYTISINLN--LNPPQYSPPVRNGVPASVMERLMNEKYDDGNGGEGMGGQCCV 179

Query: 181 CYEELHGEKEEK 191
           CYE+L+ E+EE+
Sbjct: 181 CYEDLNCEREEE 179

[Close]

BLAST of Lsi01G019550 vs. NCBI nr
Match: gi|659121671|ref|XP_008460768.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 1


Query: 48  QILQQTSPTLISDALFPFPLRELEDPPFLSHFFLLRFLSSFHLPE--AACNAIFHKISSF 107
           QILQQT   L+ + L PF      +      F +  FL SF+L    +A   I  KI SF
Sbjct: 38  QILQQTPSILMGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSF 97

Query: 108 ALRMAAGNLNLNFHIIVAIDFVHTLWVDLDPAVLVPQDSPPVRKGAPAWVMERVMKEKYD 167
           AL+    N++ +F I   ++ V  L +        P  SPP   GAP   +ER+ KEK+D
Sbjct: 98  ALQFH--NVHGSFKIEANVEHVEDLIIGEQGFQETP--SPPRTTGAPESAIERLRKEKFD 157

Query: 168 GNGREEEGDQCSVCYEELHGEKEE 190
              +EEE   CSVCYEEL G+ +E
Sbjct: 158 VLNKEEEIGDCSVCYEELKGQGKE 177

The following BLAST results are available for this feature:

BLAST of Lsi01G019550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G019550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRB0_CUCSA	4.4e-60	64.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1	[more]
A0A0A0L3Z2_CUCSA	4.2e-55	59.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1	[more]
A0A0A0LHI3_CUCSA	1.1e-37	54.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889100 PE=4 SV=1	[more]
A0A0A0K2W2_CUCSA	2.3e-08	30.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1	[more]
A0A0A0K696_CUCSA	2.3e-08	30.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1	[more]

BLAST of Lsi01G019550 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi01G019550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674460\|ref\|XP_011650219.1\|	6.3e-60	64.74	PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]	[more]
gi\|700199693\|gb\|KGN54851.1\|	6.1e-55	59.31	hypothetical protein Csa_4G551140 [Cucumis sativus]	[more]
gi\|659132530\|ref\|XP_008466247.1\|	2.7e-42	57.51	PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo]	[more]
gi\|778689036\|ref\|XP_011652885.1\|	1.5e-37	54.17	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus]	[more]
gi\|659121671\|ref\|XP_008460768.1\|	1.9e-08	38.19	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G019550.1	Lsi01G019550.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G019550	Csa4G551140	Cucumber (Chinese Long) v2	culsiB259
Lsi01G019550	CSPI04G20690	Wild cucumber (PI 183967)	cpilsiB258
Lsi01G019550	Cucsa.357530	Cucumber (Gy14) v1	cgylsiB575
Lsi01G019550	CmoCh03G001250	Cucurbita moschata (Rifu)	cmolsiB583
Lsi01G019550	Bhi03G002247	Wax gourd	lsiwgoB186
Lsi01G019550	CsGy4G019420	Cucumber (Gy14) v2	cgyblsiB243
Lsi01G019550	CsaV3_4G031160	Cucumber (Chinese Long) v3	cuclsiB279

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G019550	Melon (DHL92) v3.6.1	lsimedB159
Lsi01G019550	Melon (DHL92) v3.6.1	lsimedB169
Lsi01G019550	Silver-seed gourd	carlsiB259
Lsi01G019550	Silver-seed gourd	carlsiB260
Lsi01G019550	Silver-seed gourd	carlsiB781
Lsi01G019550	Watermelon (97103) v2	lsiwmbB133
Lsi01G019550	Watermelon (97103) v2	lsiwmbB136
Lsi01G019550	Wax gourd	lsiwgoB173
Lsi01G019550	Cucurbita maxima (Rimu)	cmalsiB598
Lsi01G019550	Cucurbita maxima (Rimu)	cmalsiB792
Lsi01G019550	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G019550	Cucurbita pepo (Zucchini)	cpelsiB055
Lsi01G019550	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G019550	Melon (DHL92) v3.5.1	lsimeB152
Lsi01G019550	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G019550	Watermelon (97103) v1	lsiwmB146