CsaV3_4G013260 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTCCTCTCAGATTCATCCTCCTTTTCCTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCTTCTTCCTCCTCCTCCGATATCTTTCAAGCGACTGAAGCTTCCGATAAATCCGCGCCAGAAAACGAGAATCGGAGCGGGACGGAGGACCGACTTGGAGTGAACAGGATGGTTGAGAAGGGATTCTGGACGTTCGTGGACATGGCGAGCGGGAGATTCTTGTGGAGAAATTTGAACGGTTCGATTCTCAACAAGAACAAGCAGGTTAAGGAAGATTGAGAGTAATTACATTATGTTCATTCTTTTAATTTGATTATGTTGTTGGATTTGGATATATCGCTGTTTCTTGATCTGATGGAGATTGAAATGTTCATCACATAGAGAAACATAAAAGAAGATTTTAATGAAATGTAAATGTTTGATGTTTATATTTTCTTTTTTGAATAACCAATTATATATTGTTCATTTAATAATAAATAGAGAAAACGAAAATTATGATATATTTAATGGACAAAAATTAATTATTGACTTTAATCACTTCTTAACGAAATTGTTATTTGTTTTTCAAGAGCTTGTTAATTATTGATTGTTAGACTTTTAATTTTTTTAATACAATCTTTCGGGTGCATGTCCTGTGCCATGTTTACTATTGACCTTTTTTTTTTTAAGTCTTCAACACTATATGGGTTATGAATTTTTCATTCAAGATAGTCATTTTATGAGTTGTAGGAATAATGGTGCCTAATTAGTTATATTCAATGTGTGAATATAAAAACAAACAATGAAAAGAATTAGTTTAGGGTGTGCATTCCACATATTTTGATTTTCTTCCTATTTTTCGCTGAAAGGAAACTTTATAATAAACGTGTATAATAAGGGCTATAATTATTGATATTATCGTAGAAACTACTAAATACAAATTCAAAATAAAAGAATAAAACACTCGATGTGAAGAGATTATTAGAAACAAGACGATCAAAGATTATTTGTCATGCCACTCGATGTAGGAGACCATTATGATATAATTGATATTCAAACTCAAAAAATCTATTTTCGAAAAGACTCGGACATAATGACATCGTTGTTCTCATAGTTGCATTCCTAAGAAAAAACTAAAACAATAAAATTTAAAGAGTAAGTTTGAGTTTATTTAGTATTGTTGGAAATAACTTGTGGGTTTAGGAACCTAAGCAAAGAACAAGATCCATAAGTAAACTTCAATGCTTCGGTCCTATATTGGAGAGTTTAGCATTGTAGGGTATAAACACCAAGGTATGCCAATTGTAACGAGAAAATGTGTCGGTGGTGATAACATTATTAACTATGCTATTACAAGTGTGCCATTGTTGTTTGTTTGGTCAGACGAGGAAGGTTGAGTTTTATTTCCTATTTGTTTAATTTGTATTTATTATTTTCTTACAATTTTTCTTCCGTTGAAAAATCCTAGTCGAACGTTTCTCTTTCTCTTGATTCTATTTCTTATTCTGATGAGTGCACGTTTGAATAGTTGTCACGTCACAACAATTCCTTTCGACATCCATTTACAACAAGTACAACTACAAATAACTTAGACTAGTTTTTAACCAATAAAACTTGAGTTCCATAGCATTTAGGTTTCTTCCCTTAATTTTGGATGGATTCAAGATTGGGATAGTTGTAAGGAAGAATTTTGGATGATATTCGGTTTGCCAAGGTTGCTTCAACTCTGGTCACGTAATGATTGAAGCTACTAAAGCTTATGGGGTTGTTGAAGGGATTCAATGGGAGAAGGAAAAAGGGTTGGATGTTGTTTGGTTGGAGATGGGTGCTAAAACCATTGTCGCCAAAGTCCTTAAATTTAAATTTTCATTGGCTACCAGTTCAGAGTCATTGATGTCAAAGTTGTTGAACTAA ATGTGTCCTCTCAGATTCATCCTCCTTTTCCTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCTTCTTCCTCCTCCTCCGATATCTTTCAAGCGACTGAAGCTTCCGATAAATCCGCGCCAGAAAACGAGAATCGGAGCGGGACGGAGGACCGACTTGGAGTGAACAGGATGGTTGAGAAGGGATTCTGGACGTTCGTGGACATGGCGAGCGGGAGATTCTTGTGGAGAAATTTGAACGGTTGCTTCAACTCTGGTCACGTAATGATTGAAGCTACTAAAGCTTATGGGGTTGTTGAAGGGATTCAATGGGAGAAGGAAAAAGGGTTGGATGTTGTTTGGTTGGAGATGGGTGCTAAAACCATTGTCGCCAAAGTCCTTAAATTTAAATTTTCATTGGCTACCAGTTCAGAGTCATTGATGTCAAAGTTGTTGAACTAA ATGTGTCCTCTCAGATTCATCCTCCTTTTCCTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCTTCTTCCTCCTCCTCCGATATCTTTCAAGCGACTGAAGCTTCCGATAAATCCGCGCCAGAAAACGAGAATCGGAGCGGGACGGAGGACCGACTTGGAGTGAACAGGATGGTTGAGAAGGGATTCTGGACGTTCGTGGACATGGCGAGCGGGAGATTCTTGTGGAGAAATTTGAACGGTTGCTTCAACTCTGGTCACGTAATGATTGAAGCTACTAAAGCTTATGGGGTTGTTGAAGGGATTCAATGGGAGAAGGAAAAAGGGTTGGATGTTGTTTGGTTGGAGATGGGTGCTAAAACCATTGTCGCCAAAGTCCTTAAATTTAAATTTTCATTGGCTACCAGTTCAGAGTCATTGATGTCAAAGTTGTTGAACTAA MCPLRFILLFLSAILAGYFAWRSASSSSSSSDIFQATEASDKSAPENENRSGTEDRLGVNRMVEKGFWTFVDMASGRFLWRNLNGCFNSGHVMIEATKAYGVVEGIQWEKEKGLDVVWLEMGAKTIVAKVLKFKFSLATSSESLMSKLLN
BLAST of CsaV3_4G013260 vs. NCBI nr
Match: KGN53938.1 (hypothetical protein Csa_4G192100 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 6.4e-37 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. NCBI nr
Match: XP_008441985.1 (PREDICTED: uncharacterized protein LOC103485982 [Cucumis melo]) HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24 Identity = 68/93 (73.12%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. NCBI nr
Match: XP_022156242.1 (uncharacterized protein LOC111023174 [Momordica charantia]) HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16 Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. NCBI nr
Match: XP_010558727.1 (PREDICTED: uncharacterized protein LOC104827276 [Tarenaya hassleriana]) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 50/91 (54.95%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. NCBI nr
Match: XP_008391687.2 (PREDICTED: uncharacterized protein LOC103453877 [Malus domestica]) HSP 1 Score: 86.7 bits (213), Expect = 7.6e-14 Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TAIR10
Match: AT5G18150.1 (Methyltransferase-related protein) HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14 Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TAIR10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-14 Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TAIR10
Match: AT5G58375.1 (Methyltransferase-related protein) HSP 1 Score: 61.2 bits (147), Expect = 6.2e-10 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TrEMBL
Match: tr|A0A0A0KWN3|A0A0A0KWN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192100 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TrEMBL
Match: tr|A0A1S3B5E4|A0A1S3B5E4_CUCME (uncharacterized protein LOC103485982 OS=Cucumis melo OX=3656 GN=LOC103485982 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24 Identity = 68/93 (73.12%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TrEMBL
Match: tr|A0A2P5ALZ8|A0A2P5ALZ8_PARAD (Methyltransferase-related protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_319090 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TrEMBL
Match: tr|A0A1Q3DJB3|A0A1Q3DJB3_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22415 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13 Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CsaV3_4G013260 vs. TrEMBL
Match: tr|A0A1S3VD14|A0A1S3VD14_VIGRR (uncharacterized protein LOC106773783 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773783 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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