CsaV3_4G009610 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G009610
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 7318733 .. 7319762 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCCCTCTCATCTCAACCGTCCACCTCTACGTAACTCATCAATTAACAACTGTACCTTTAAGGTGGACCTCCTAACCCACCCCAGCTCCCATTCTTCACACACAAAAGAAGAAGAAACGGAACCCCTCTCTTTAGGCCTTCCCATTCACTACACTCATTATTACGCCTCTCTTAAATTTCGAATACGCATCCCCCCCGTTCATCACCCACATTTCTTTCATTACCTTTTCTACTCCCATCCAACGGCTCCCATCATATTTACCTTTCACTCCAACGCTTCTTTCACTCTCTTCTTTCTTCTATATATACTCCCTCTCTGCTACTGCTTTCTTCTCAATCACTCACAACTCTCTCTCCATTTTCTCTTCTCTTTTTACATTCATCTTTTCCTTTCTTTCAATCTTTCCATTTCATTTCCTATACACAAATGGCGATTACAAGTCTTGTTGCCCTTATTTTTGTGTCATTCTTTATCGCCTCTGCTTTTGCTCAATCCCCGGCTGCATCTCCCTCATTGTCTCCCACCAAATCACCCTCCAAGGCTCCATCCCATAACTCCCCCAAATCCTCTCCCGCGGTGGCTCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTTCTTCTTCTCCCTCTACTTCTCCGTCTCCGGCCAGTTCTCCCGCCTCGATCTCCTCACCGCCTGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTCGGATCTGTTGCCGTTGCGCTATACGCCGTCGTTTTGATGATCTGAGTGCCACTCGGATTCCATTCCTTCTCTTTGTCTGTCTATTTGAGTGATTTATTGTAGCATTTCACTGAGTACATTTTATGTTGATTTTGTATTTTTGGTTTTTTTTTTACTTTCACAGTTATTATTATATATTATTCTTCATTTATCTAATTTAATTCGTTTTATTGCCTTCCAGTTATGTGTTTTTGTTCTTCTTCTCTTCTCATCTATTAATTTACAATCACCTTTTCTAATTTCTCTC

mRNA sequence

ATGGCGATTACAAGTCTTGTTGCCCTTATTTTTGTGTCATTCTTTATCGCCTCTGCTTTTGCTCAATCCCCGGCTGCATCTCCCTCATTGTCTCCCACCAAATCACCCTCCAAGGCTCCATCCCATAACTCCCCCAAATCCTCTCCCGCGGTGGCTCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTTCTTCTTCTCCCTCTACTTCTCCGTCTCCGGCCAGTTCTCCCGCCTCGATCTCCTCACCGCCTGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTCGGATCTGTTGCCGTTGCGCTATACGCCGTCGTTTTGATGATCTGA

Coding sequence (CDS)

ATGGCGATTACAAGTCTTGTTGCCCTTATTTTTGTGTCATTCTTTATCGCCTCTGCTTTTGCTCAATCCCCGGCTGCATCTCCCTCATTGTCTCCCACCAAATCACCCTCCAAGGCTCCATCCCATAACTCCCCCAAATCCTCTCCCGCGGTGGCTCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTTCTTCTTCTCCCTCTACTTCTCCGTCTCCGGCCAGTTCTCCCGCCTCGATCTCCTCACCGCCTGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTCGGATCTGTTGCCGTTGCGCTATACGCCGTCGTTTTGATGATCTGA

Protein sequence

MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSHNSPKSSPAVAPTPSSLKSPPSPPSSSPSTSPSPASSPASISSPPADAPAPSGNGAASITFSVFGSVAVALYAVVLMI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G009610.1CsaV3_4G009610.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..54

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G009610Silver-seed gourdcarcucB0911
CsaV3_4G009610Cucumber (Gy14) v2cgybcucB171
CsaV3_4G009610Cucurbita pepo (Zucchini)cpecucB0267
CsaV3_4G009610Cucurbita pepo (Zucchini)cpecucB0512
CsaV3_4G009610Bottle gourd (USVL1VR-Ls)cuclsiB297
CsaV3_4G009610Melon (DHL92) v3.5.1cucmeB319
CsaV3_4G009610Watermelon (Charleston Gray)cucwcgB280
CsaV3_4G009610Watermelon (97103) v2cucwmbB274
CsaV3_4G009610Wax gourdcucwgoB362