CsaV3_2G019710 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G019710
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	trafficking protein particle complex subunit 2-like
Location	chr2 : 15733997 .. 15734511 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAATAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCTTCTTCATCGTTTTCCATTTTGTTTTTCATGTTTAGGCTGAATATTTCCTTCACAAGATCGCCAATAAAAGGTGATATCGTTAATTACTCTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCATGACATGAAAGAGAGAGGATTCCGCTCAGCTGCATCAGTTTATACTGCATGCGTCCCTCGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTGAGTTCGTATTCCTTCTAGTTCTTTATTAGATCATCGAGACGCCTTCTTTATCTTTTTTTTTTTTTGTTCTTTTCCCCTTTAAATTTCGGCTTAACTCCCTTGTTGGATTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

mRNA sequence

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAATAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATACTGCATGCGTCCCTCGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

Coding sequence (CDS)

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAATAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATACTGCATGCGTCCCTCGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

Protein sequence

MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHIL

Homology

[Close]

BLAST of CsaV3_2G019710 vs. NCBI nr
Match: KGN62236.1 (hypothetical protein Csa_2G338800 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of CsaV3_2G019710 vs. NCBI nr
Match: XP_004147330.1 (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of CsaV3_2G019710 vs. NCBI nr
Match: XP_022947789.1 (transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_022970901.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita maxima] >XP_023534751.1 transport protein particle 20 kDa subunit [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 7.8e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of CsaV3_2G019710 vs. NCBI nr
Match: XP_022947788.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 7.8e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of CsaV3_2G019710 vs. NCBI nr
Match: XP_022970900.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 7.8e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of CsaV3_2G019710 vs. TAIR10
Match: AT1G80500.1 (SNARE-like superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 8.6e-35
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1  MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of CsaV3_2G019710 vs. Swiss-Prot
Match: sp|P0DI81|TPC2A_HUMAN (Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of CsaV3_2G019710 vs. Swiss-Prot
Match: sp|P0DI82|TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens OX=9606 GN=TRAPPC2B PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of CsaV3_2G019710 vs. Swiss-Prot
Match: sp|Q3T0F2|TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of CsaV3_2G019710 vs. Swiss-Prot
Match: sp|E2QV03|TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris OX=9615 GN=TRAPPC2 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of CsaV3_2G019710 vs. Swiss-Prot
Match: sp|F1SRI0|TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of CsaV3_2G019710 vs. TrEMBL
Match: tr|A0A0A0LQF1|A0A0A0LQF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of CsaV3_2G019710 vs. TrEMBL
Match: tr|A0A1S3CCU2|A0A1S3CCU2_CUCME (trafficking protein particle complex subunit 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499581 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.7e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of CsaV3_2G019710 vs. TrEMBL
Match: tr|A0A067F9D4|A0A067F9D4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.7e-34
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of CsaV3_2G019710 vs. TrEMBL
Match: tr|A0A2N9IH57|A0A2N9IH57_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52979 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-33
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of CsaV3_2G019710 vs. TrEMBL
Match: tr|A0A2H5NXF6|A0A2H5NXF6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_084620 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-33
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

The following BLAST results are available for this feature:

BLAST of CsaV3_2G019710 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62236.1	3.2e-35	100.00	hypothetical protein Csa_2G338800 [Cucumis sativus]	[more]
XP_004147330.1	2.7e-34	100.00	PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus...	[more]
XP_022947789.1	7.8e-34	98.70	transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_02...	[more]
XP_022947788.1	7.8e-34	98.70	trafficking protein particle complex subunit 2 isoform X1 [Cucurbita moschata]	[more]
XP_022970900.1	7.8e-34	98.70	trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G019710 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80500.1	8.6e-35	89.61	SNARE-like superfamily protein	[more]

BLAST of CsaV3_2G019710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0DI81\|TPC2A_HUMAN	2.6e-12	41.98	Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]
sp\|P0DI82\|TPC2B_HUMAN	2.6e-12	41.98	Trafficking protein particle complex subunit 2B OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
sp\|Q3T0F2\|TPPC2_BOVIN	2.6e-12	41.98	Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 ...	[more]
sp\|E2QV03\|TPPC2_CANLF	2.6e-12	41.98	Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris OX=9615...	[more]
sp\|F1SRI0\|TPPC2_PIG	2.6e-12	41.98	Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 ...	[more]

BLAST of CsaV3_2G019710 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQF1\|A0A0A0LQF1_CUCSA	2.1e-35	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1	[more]
tr\|A0A1S3CCU2\|A0A1S3CCU2_CUCME	6.7e-34	98.70	trafficking protein particle complex subunit 2 isoform X2 OS=Cucumis melo OX=365...	[more]
tr\|A0A067F9D4\|A0A067F9D4_CITSI	6.7e-34	94.94	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032720mg PE=4 SV=1	[more]
tr\|A0A2N9IH57\|A0A2N9IH57_FAGSY	1.5e-33	93.67	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52979 PE=4 SV=1	[more]
tr\|A0A2H5NXF6\|A0A2H5NXF6_CITUN	2.0e-33	93.67	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_084620 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006888	ER to Golgi vesicle-mediated transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf
IPR006722	Sedlin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G019710.1	CsaV3_2G019710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.450.70		coord: 1..79 e-value: 2.1E-24 score: 88.1
None	No IPR available	PANTHER	PTHR12403:SF1	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2	coord: 1..78
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 9..78 e-value: 1.8E-20 score: 73.3
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	MBP-1 INTERACTING PROTEIN-2A	coord: 1..78
IPR011012	Longin-like domain superfamily	SUPERFAMILY	SSF64356	SNARE-like	coord: 1..78

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G019710	CSPI02G16500	Wild cucumber (PI 183967)	cpicucB082
CsaV3_2G019710	Cucsa.228110	Cucumber (Gy14) v1	cgycucB344
CsaV3_2G019710	Cp4.1LG05g15730	Cucurbita pepo (Zucchini)	cpecucB0886
CsaV3_2G019710	CsGy2G016090	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G019710	Cla007855	Watermelon (97103) v1	cucwmB161
CsaV3_2G019710	MELO3C023193	Melon (DHL92) v3.5.1	cucmeB100
CsaV3_2G019710	ClCG02G000050	Watermelon (Charleston Gray)	cucwcgB135
CsaV3_2G019710	Lsi10G007870	Bottle gourd (USVL1VR-Ls)	cuclsiB107
CsaV3_2G019710	MELO3C023193.2	Melon (DHL92) v3.6.1	cucmedB092
CsaV3_2G019710	Cla97C02G026250	Watermelon (97103) v2	cucwmbB121
CsaV3_2G019710	Bhi10G001393	Wax gourd	cucwgoB190

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G019710	Cucurbita maxima (Rimu)	cmacucB0652
CsaV3_2G019710	Cucurbita maxima (Rimu)	cmacucB0708
CsaV3_2G019710	Cucurbita moschata (Rifu)	cmocucB0638
CsaV3_2G019710	Cucurbita moschata (Rifu)	cmocucB0642
CsaV3_2G019710	Cucurbita moschata (Rifu)	cmocucB0694
CsaV3_2G019710	Cucurbita pepo (Zucchini)	cpecucB0335