Cla97C02G026250 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G026250
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Trafficking protein particle complex subunit
Location	Cla97Chr02 : 78469 .. 78986 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCATTTTCCATTTCTTTTCATGTTTAGGCTGAATATTTCCTTCACAAGATCGCCAATAATAGGTGATCTCGTTTTGATTCTTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCTTGACATGAAAGAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTGAGTTCGTATTCCTTTTAGTTTTTTATTTAATCATCGAGACATCTCCTTTCTCTTCTTTTTCTTTTTTGTTTTTTCCTTTGAATTTCGCCTTAGATCTCTTTTCTTGTTGCGGTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

mRNA sequence

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

Coding sequence (CDS)

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA

Protein sequence

MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHIL

Homology

[Close]

BLAST of Cla97C02G026250 vs. NCBI nr
Match: KGN62236.1 (hypothetical protein Csa_2G338800 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 5.3e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cla97C02G026250 vs. NCBI nr
Match: XP_004147330.1 (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cla97C02G026250 vs. NCBI nr
Match: XP_022947789.1 (transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_022970901.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita maxima] >XP_023534751.1 transport protein particle 20 kDa subunit [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cla97C02G026250 vs. NCBI nr
Match: XP_022947788.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cla97C02G026250 vs. NCBI nr
Match: XP_022970900.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cla97C02G026250 vs. TrEMBL
Match: tr|A0A0A0LQF1|A0A0A0LQF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-35
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cla97C02G026250 vs. TrEMBL
Match: tr|A0A1S3CCU2|A0A1S3CCU2_CUCME (trafficking protein particle complex subunit 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499581 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.7e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cla97C02G026250 vs. TrEMBL
Match: tr|A0A067F9D4|A0A067F9D4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-33
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cla97C02G026250 vs. TrEMBL
Match: tr|A0A2N9IH57|A0A2N9IH57_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52979 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-33
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cla97C02G026250 vs. TrEMBL
Match: tr|A0A2H5NXF6|A0A2H5NXF6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_084620 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.3e-33
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cla97C02G026250 vs. Swiss-Prot
Match: sp|P0DI81|TPC2A_HUMAN (Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC2 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cla97C02G026250 vs. Swiss-Prot
Match: sp|P0DI82|TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens OX=9606 GN=TRAPPC2B PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cla97C02G026250 vs. Swiss-Prot
Match: sp|Q3T0F2|TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cla97C02G026250 vs. Swiss-Prot
Match: sp|E2QV03|TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris OX=9615 GN=TRAPPC2 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cla97C02G026250 vs. Swiss-Prot
Match: sp|F1SRI0|TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cla97C02G026250 vs. TAIR10
Match: AT1G80500.1 (SNARE-like superfamily protein)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-34
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1  MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

The following BLAST results are available for this feature:

BLAST of Cla97C02G026250 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62236.1	5.3e-35	100.00	hypothetical protein Csa_2G338800 [Cucumis sativus]	[more]
XP_004147330.1	3.5e-34	100.00	PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus...	[more]
XP_022947789.1	1.0e-33	98.70	transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_02...	[more]
XP_022947788.1	1.0e-33	98.70	trafficking protein particle complex subunit 2 isoform X1 [Cucurbita moschata]	[more]
XP_022970900.1	1.0e-33	98.70	trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima]	[more]

BLAST of Cla97C02G026250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQF1\|A0A0A0LQF1_CUCSA	3.5e-35	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1	[more]
tr\|A0A1S3CCU2\|A0A1S3CCU2_CUCME	8.7e-34	98.70	trafficking protein particle complex subunit 2 isoform X2 OS=Cucumis melo OX=365...	[more]
tr\|A0A067F9D4\|A0A067F9D4_CITSI	1.1e-33	94.94	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032720mg PE=4 SV=1	[more]
tr\|A0A2N9IH57\|A0A2N9IH57_FAGSY	2.5e-33	93.67	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52979 PE=4 SV=1	[more]
tr\|A0A2H5NXF6\|A0A2H5NXF6_CITUN	3.3e-33	93.67	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_084620 PE=4 SV=1	[more]

BLAST of Cla97C02G026250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0DI81\|TPC2A_HUMAN	3.3e-12	41.98	Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]
sp\|P0DI82\|TPC2B_HUMAN	3.3e-12	41.98	Trafficking protein particle complex subunit 2B OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
sp\|Q3T0F2\|TPPC2_BOVIN	3.3e-12	41.98	Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 ...	[more]
sp\|E2QV03\|TPPC2_CANLF	3.3e-12	41.98	Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris OX=9615...	[more]
sp\|F1SRI0\|TPPC2_PIG	3.3e-12	41.98	Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 ...	[more]

BLAST of Cla97C02G026250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80500.1	1.1e-34	89.61	SNARE-like superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006888	ER to Golgi vesicle-mediated transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf
IPR006722	Sedlin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006810	transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G026250.1	Cla97C02G026250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 9..78 e-value: 1.8E-20 score: 73.3
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	MBP-1 INTERACTING PROTEIN-2A	coord: 1..78
None	No IPR available	GENE3D	G3DSA:3.30.450.70		coord: 1..79 e-value: 2.1E-24 score: 88.1
None	No IPR available	PANTHER	PTHR12403:SF1	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2	coord: 1..78
IPR011012	Longin-like domain superfamily	SUPERFAMILY	SSF64356	SNARE-like	coord: 1..78

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G026250	Cla007855	Watermelon (97103) v1	wmwmbB324
Cla97C02G026250	Csa2G338800	Cucumber (Chinese Long) v2	cuwmbB117
Cla97C02G026250	MELO3C023193	Melon (DHL92) v3.5.1	mewmbB093
Cla97C02G026250	ClCG02G000050	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G026250	CSPI02G16500	Wild cucumber (PI 183967)	cpiwmbB119
Cla97C02G026250	Cucsa.228110	Cucumber (Gy14) v1	cgywmbB404
Cla97C02G026250	CmaCh02G000020	Cucurbita maxima (Rimu)	cmawmbB624
Cla97C02G026250	Lsi10G007870	Bottle gourd (USVL1VR-Ls)	lsiwmbB053
Cla97C02G026250	CsGy2G016090	Cucumber (Gy14) v2	cgybwmbB112
Cla97C02G026250	MELO3C023193.2	Melon (DHL92) v3.6.1	medwmbB088
Cla97C02G026250	CsaV3_2G019710	Cucumber (Chinese Long) v3	cucwmbB121
Cla97C02G026250	Bhi10G001393	Wax gourd	wgowmbB372

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G026250	Cucumber (Gy14) v2	cgybwmbB115
Cla97C02G026250	Cucumber (Gy14) v1	cgywmbB403
Cla97C02G026250	Cucurbita maxima (Rimu)	cmawmbB569
Cla97C02G026250	Cucurbita moschata (Rifu)	cmowmbB546
Cla97C02G026250	Wild cucumber (PI 183967)	cpiwmbB125
Cla97C02G026250	Cucumber (Chinese Long) v3	cucwmbB124
Cla97C02G026250	Cucumber (Chinese Long) v2	cuwmbB122