Cp4.1LG05g15730 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g15730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Trafficking protein particle complex subunit 2
Location	Cp4.1LG05 : 10842101 .. 10842773 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATCTAAACATATCTGCATGCAAGTTAGAAGCTTTAGCAATTAGTTAGCCCAAAAGAAATACCCAAGCCCAACCCAACTCGTCTCCCTCGCTTCAACTCTCTCTCTCTCTCTCTCTCTCTCATCTTACACCGCCGGCAACTTCTCGAATTGCTTCTCTGCAATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAACATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAGTATTTCCTTCTTTTTCATTTTCTATCGTTTCACGTTTAGATCGCATTTTTCCTTCACGAGATCGCCAGAAAAGAAAAAAAAGATGATTTCATTTTGGTTCTTTAATTACTTTAGTTTTGACTGTCATTGGTCGCTCATCTTTTTGGCTTGACATGAAAGAGAGAGGATTCTGCTCAGCTGCATCAATTTATATTGCACGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTGAGGTCTTATTCCTTCAGTTTTATTATTAGATCATCGAGATACCTCTTTTTTCTTCTATTTCCTTTGAAATTCCCTTTAGATTCTTTTTCTTGGTGCGTTTTTTGCAGGTTCTTGAAAGCAGTCGATAGATTCAATGATCTGGTGGTGTCTGTTTATGTAACCGCTGGCCATATCCTTTAA

mRNA sequence

TACATCTAAACATATCTGCATGCAAGTTAGAAGCTTTAGCAATTAGTTAGCCCAAAAGAAATACCCAAGCCCAACCCAACTCGTCTCCCTCGCTTCAACTCTCTCTCTCTCTCTCTCTCTCTCATCTTACACCGCCGGCAACTTCTCGAATTGCTTCTCTGCAATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAACATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAATTTATATTGCACGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGATTCAATGATCTGGTGGTGTCTGTTTATGTAACCGCTGGCCATATCCTTTAA

Coding sequence (CDS)

ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAACATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAATTTATATTGCACGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGATTCAATGATCTGGTGGTGTCTGTTTATGTAACCGCTGGCCATATCCTTTAA

Protein sequence

MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHIL

Homology

[Close]

BLAST of Cp4.1LG05g15730 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cp4.1LG05g15730 vs. Swiss-Prot
Match: TPPC2_PONAB (Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cp4.1LG05g15730 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cp4.1LG05g15730 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cp4.1LG05g15730 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
          M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1  MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61 LKAVDRFNDLVVSVYVTAGHI 79
          LK VD+FN+  VS +VTAGH+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHM 81

[Close]

BLAST of Cp4.1LG05g15730 vs. TrEMBL
Match: A0A0A0LQF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338800 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-35
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cp4.1LG05g15730 vs. TrEMBL
Match: A0A067F9D4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-33
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cp4.1LG05g15730 vs. TrEMBL
Match: A0A061EID8_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-33
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN+IPIYEAEVGSAAKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          +DRFNDLVVSVYVTAGH
Sbjct: 61 IDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cp4.1LG05g15730 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-33
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN+IPIYEAEVGSAAKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          +DRFNDLVVSVYVTAGH
Sbjct: 61 IDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cp4.1LG05g15730 vs. TrEMBL
Match: V4U1H0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022803mg PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-33
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSAAKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          +DRFNDLVVSVYVTAGH
Sbjct: 61 IDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cp4.1LG05g15730 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 2.9e-35
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIV RN+IPIYEAEVGSAAKRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1  MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cp4.1LG05g15730 vs. NCBI nr
Match: gi|700207117|gb|KGN62236.1| (hypothetical protein Csa_2G338800 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 6.1e-35
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          VDRFNDLVVSVYVTAGHIL
Sbjct: 61 VDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cp4.1LG05g15730 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 4.0e-34
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cp4.1LG05g15730 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33
Identity = 75/77 (97.40%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MA TACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          VDRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77

[Close]

BLAST of Cp4.1LG05g15730 vs. NCBI nr
Match: gi|641845079|gb|KDO63968.1| (hypothetical protein CISIN_1g032720mg [Citrus sinensis])

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-33
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGHIL 80
          +DRFNDLVVSVYVTAGHIL
Sbjct: 61 IDRFNDLVVSVYVTAGHIL 79

[Close]

BLAST of Cp4.1LG05g15730 vs. NCBI nr
Match: gi|590654916|ref|XP_007033837.1| (SNARE-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 149.1 bits (375), Expect = 3.3e-33
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
          MATTACFIIVSRN+IPIYEAEVGSAAKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1  MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61 VDRFNDLVVSVYVTAGH 78
          +DRFNDLVVSVYVTAGH
Sbjct: 61 IDRFNDLVVSVYVTAGH 77

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g15730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPC2B_HUMAN	2.5e-12	41.98	Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1...	[more]
TPPC2_PONAB	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 S...	[more]
TPPC2_PIG	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=...	[more]
TPPC2_CANLF	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAP...	[more]
TPPC2_BOVIN	2.5e-12	41.98	Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=...	[more]

BLAST of Cp4.1LG05g15730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQF1_CUCSA	4.3e-35	98.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338800 PE=4 SV=1	[more]
A0A067F9D4_CITSI	1.4e-33	93.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1	[more]
A0A061EID8_THECC	2.3e-33	94.81	SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 S...	[more]
A0A061EJF7_THECC	2.3e-33	94.81	SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 S...	[more]
V4U1H0_9ROSI	3.0e-33	94.81	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022803mg PE=4 SV=1	[more]

BLAST of Cp4.1LG05g15730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80500.1	2.9e-35	90.91	SNARE-like superfamily protein	[more]

BLAST of Cp4.1LG05g15730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207117\|gb\|KGN62236.1\|	6.1e-35	98.73	hypothetical protein Csa_2G338800 [Cucumis sativus]	[more]
gi\|449459192\|ref\|XP_004147330.1\|	4.0e-34	98.70	PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus...	[more]
gi\|659121801\|ref\|XP_008460820.1\|	1.5e-33	97.40	PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]	[more]
gi\|641845079\|gb\|KDO63968.1\|	2.0e-33	93.67	hypothetical protein CISIN_1g032720mg [Citrus sinensis]	[more]
gi\|590654916\|ref\|XP_007033837.1\|	3.3e-33	94.81	SNARE-like superfamily protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0006888	ER to Golgi vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf
IPR006722	Sedlin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006810	transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g15730.1	Cp4.1LG05g15730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	MBP-1 INTERACTING PROTEIN-2A	coord: 1..79 score: 6.1
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 9..78 score: 1.5
IPR011012	Longin-like domain	unknown	SSF64356	SNARE-like	coord: 1..78 score: 1.83
None	No IPR available	GENE3D	G3DSA:3.30.450.70		coord: 3..78 score: 8.3
None	No IPR available	PANTHER	PTHR12403:SF14	SUBFAMILY NOT NAMED	coord: 1..79 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g15730	CmaCh02G000020	Cucurbita maxima (Rimu)	cmacpeB646
Cp4.1LG05g15730	Cla007855	Watermelon (97103) v1	cpewmB738
Cp4.1LG05g15730	Csa2G338800	Cucumber (Chinese Long) v2	cpecuB709
Cp4.1LG05g15730	MELO3C023193	Melon (DHL92) v3.5.1	cpemeB678
Cp4.1LG05g15730	ClCG02G000050	Watermelon (Charleston Gray)	cpewcgB669
Cp4.1LG05g15730	CSPI02G16500	Wild cucumber (PI 183967)	cpecpiB711
Cp4.1LG05g15730	Lsi10G007870	Bottle gourd (USVL1VR-Ls)	cpelsiB597
Cp4.1LG05g15730	MELO3C023193.2	Melon (DHL92) v3.6.1	cpemedB810
Cp4.1LG05g15730	CsaV3_2G019710	Cucumber (Chinese Long) v3	cpecucB0886
Cp4.1LG05g15730	Bhi10G001393	Wax gourd	cpewgoB0954
Cp4.1LG05g15730	Carg26725	Silver-seed gourd	carcpeB0461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None