CsaV3_1G015780 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAACAGAGTTTGGAGCTTCCACAGTTCTGTCAACCTGTTTTGGCTTTGCATCTTCTTCTTCTACCTTATTGGCCATGGATTTCCGATGGTAATCGAATCTGCTGAAGACGAGACCCCAGTATCCGATCTTTTGAGTCGAGACCATTGGAGGGAGATAGCTGGATATGGTGAGGAGAGATTGTCCACTGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTATTAAAGGTACTACAAATAACAGCTAACTTCTTATTTGAAGAACAAAAAAAACACCAATAAAATCAAGCTTTGTTTTTACCTTTCTGATGATATTATACAAACCAAATCAATCACTGCAGGTGCTATGGTGGGTGTGAATTGCCACAACACTGGAAAAAACAGCAAATCTTCTGATTGGGTACATGGAGTCACGGATGAATTTGGGGACTTTGTTATTGATATTCCATCCCATCTTCATGCAACCCGAAGCTTCGAAAATGTCTGTTCCATCAAGATTCTTCGAACACCGAAGAACACACACTGCCGACCTGCTCATTTAGCTGGAAGAAAGCCGCTGCAATTGTCATCATTTGGTGGTGGCATCCGTACATATACTTCTGGTGTCCTCAGGCTGCAGCACCAAACATCCAGACCCCTGCAAGCTTGTAGAAATGAGGGGAGGGGTGGCCGTCAGACCTCATGGTAG ATGGTGAACAGAGTTTGGAGCTTCCACAGTTCTGTCAACCTGTTTTGGCTTTGCATCTTCTTCTTCTACCTTATTGGCCATGGATTTCCGATGGTAATCGAATCTGCTGAAGACGAGACCCCAGTATCCGATCTTTTGAGTCGAGACCATTGGAGGGAGATAGCTGGATATGGTGAGGAGAGATTGTCCACTGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTATTAAAGGTGCTATGGTGGGTGTGAATTGCCACAACACTGGAAAAAACAGCAAATCTTCTGATTGGGTACATGGAGTCACGGATGAATTTGGGGACTTTGTTATTGATATTCCATCCCATCTTCATGCAACCCGAAGCTTCGAAAATGTCTGTTCCATCAAGATTCTTCGAACACCGAAGAACACACACTGCCGACCTGCTCATTTAGCTGGAAGAAAGCCGCTGCAATTGTCATCATTTGGTGGTGGCATCCGTACATATACTTCTGGTGTCCTCAGGCTGCAGCACCAAACATCCAGACCCCTGCAAGCTTGTAGAAATGAGGGGAGGGGTGGCCGTCAGACCTCATGGTAG ATGGTGAACAGAGTTTGGAGCTTCCACAGTTCTGTCAACCTGTTTTGGCTTTGCATCTTCTTCTTCTACCTTATTGGCCATGGATTTCCGATGGTAATCGAATCTGCTGAAGACGAGACCCCAGTATCCGATCTTTTGAGTCGAGACCATTGGAGGGAGATAGCTGGATATGGTGAGGAGAGATTGTCCACTGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTATTAAAGGTGCTATGGTGGGTGTGAATTGCCACAACACTGGAAAAAACAGCAAATCTTCTGATTGGGTACATGGAGTCACGGATGAATTTGGGGACTTTGTTATTGATATTCCATCCCATCTTCATGCAACCCGAAGCTTCGAAAATGTCTGTTCCATCAAGATTCTTCGAACACCGAAGAACACACACTGCCGACCTGCTCATTTAGCTGGAAGAAAGCCGCTGCAATTGTCATCATTTGGTGGTGGCATCCGTACATATACTTCTGGTGTCCTCAGGCTGCAGCACCAAACATCCAGACCCCTGCAAGCTTGTAGAAATGAGGGGAGGGGTGGCCGTCAGACCTCATGGTAG MVNRVWSFHSSVNLFWLCIFFFYLIGHGFPMVIESAEDETPVSDLLSRDHWREIAGYGEERLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFGDFVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGVLRLQHQTSRPLQACRNEGRGGRQTSW
BLAST of CsaV3_1G015780 vs. NCBI nr
Match: XP_004139527.1 (PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus] >KGN65025.1 hypothetical protein Csa_1G181380 [Cucumis sativus]) HSP 1 Score: 442.2 bits (1136), Expect = 9.7e-121 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. NCBI nr
Match: XP_008463598.1 (PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo]) HSP 1 Score: 423.7 bits (1088), Expect = 3.6e-115 Identity = 195/205 (95.12%), Postives = 200/205 (97.56%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. NCBI nr
Match: XP_022927337.1 (uncharacterized protein LOC111434195 [Cucurbita moschata]) HSP 1 Score: 344.4 bits (882), Expect = 2.8e-91 Identity = 162/194 (83.51%), Postives = 175/194 (90.21%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. NCBI nr
Match: XP_023001613.1 (uncharacterized protein LOC111495689 [Cucurbita maxima]) HSP 1 Score: 343.2 bits (879), Expect = 6.1e-91 Identity = 162/194 (83.51%), Postives = 175/194 (90.21%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. NCBI nr
Match: XP_022142515.1 (uncharacterized protein LOC111012615 [Momordica charantia]) HSP 1 Score: 339.3 bits (869), Expect = 8.9e-90 Identity = 156/207 (75.36%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TAIR10
Match: AT5G47635.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29 Identity = 63/146 (43.15%), Postives = 87/146 (59.59%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TAIR10
Match: AT4G17215.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 108.2 bits (269), Expect = 6.0e-24 Identity = 62/144 (43.06%), Postives = 80/144 (55.56%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TAIR10
Match: AT2G40113.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23 Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TAIR10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 48.9 bits (115), Expect = 4.3e-06 Identity = 33/118 (27.97%), Postives = 56/118 (47.46%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TrEMBL
Match: tr|A0A0A0LT20|A0A0A0LT20_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181380 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 6.4e-121 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TrEMBL
Match: tr|A0A1S3CJM3|A0A1S3CJM3_CUCME (uncharacterized protein LOC103501709 OS=Cucumis melo OX=3656 GN=LOC103501709 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 2.4e-115 Identity = 195/205 (95.12%), Postives = 200/205 (97.56%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TrEMBL
Match: tr|A0A2N9GHJ5|A0A2N9GHJ5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29858 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.5e-53 Identity = 102/186 (54.84%), Postives = 135/186 (72.58%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TrEMBL
Match: tr|A0A2I4HP65|A0A2I4HP65_9ROSI (uncharacterized protein LOC109020018 OS=Juglans regia OX=51240 GN=LOC109020018 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49 Identity = 98/170 (57.65%), Postives = 123/170 (72.35%), Query Frame = 0
BLAST of CsaV3_1G015780 vs. TrEMBL
Match: tr|B9HCD0|B9HCD0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G005600v3 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.3e-48 Identity = 91/171 (53.22%), Postives = 120/171 (70.18%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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