CmaCh18G006080 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G006080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pollen Ole e 1 allergen and extensin family protein, putative
Location	Cma_Chr18 : 5404749 .. 5405667 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTAAAGCCTAAAGAAAGAAGATGCTGACCAGAGTTTGCAGCTTCCACCATTGTTTCTTCTTCTTCCTCCTTTTTGCCTATGGATTTCCGACGGTAGTCGAATCTGCGGAACGTGAGACCCCGTTATCCAATCCGTTGAGTCGAGACGAATGGAGGCAGATTGCAGGATATGGCGAGGAGAGACTGTCCACAGTTCTGGTCACAGGCTCTCTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCGAGTTCATGCATGGCCTGTAAAAGGTACTATAATTGCAGCTAGCCTTTAAGAAAAACTATGAGATCAAGCTTGGTTTTTACCTTTCTGATGAATATCAATCACTGCAGGTGCCATGGTGGGTGTGAAGTGCCACAACTCTGGAAAAAACAGCAAATCTTCTGATTGGGTACGTGGAATCACAGATGAATTTGGAGACTTCATTATTGATATTCCATCCCGGTTTCATGCAACACAGAGCTTTGAAAAGGTCTGTTCCATCAAGATTCTTCGCACACCAAAGAACACGCGATGTCGACCTGCTCATTTTGCAGGTCGTAAACAGCTGCAATTATCGTCGTTTGGAGGAGGCATCCGCACGTATACTTCTGGTATCCTCAGGTTGCAGCACCAAACATCTCAACCCCTGCAAGCTTGTAAAAATAAGGGAATTGATGATCAACAGACATGGTAGACCATAATATACGGCTCATGTAGATGGCGCTGAAGTCACAACGATGAGTTATTGGTTTGTAGTTAAAATGATAAATGGAGCTTGCAGAAATATGTATTGTTAGTGTATAAACACAGATATGTTTATGTAATACAGCAATTTATTTCATACCATATATGGCAGAAGTGTGAGTGCATCGAGTCCTCCTGTACATCGGCACAGCAAGTAAGCTTATCGGCA

mRNA sequence

TCCTAAAGCCTAAAGAAAGAAGATGCTGACCAGAGTTTGCAGCTTCCACCATTGTTTCTTCTTCTTCCTCCTTTTTGCCTATGGATTTCCGACGGTAGTCGAATCTGCGGAACGTGAGACCCCGTTATCCAATCCGTTGAGTCGAGACGAATGGAGGCAGATTGCAGGATATGGCGAGGAGAGACTGTCCACAGTTCTGGTCACAGGCTCTCTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCGAGTTCATGCATGGCCTGTAAAAGGTGCCATGGTGGGTGTGAAGTGCCACAACTCTGGAAAAAACAGCAAATCTTCTGATTGGGTACGTGGAATCACAGATGAATTTGGAGACTTCATTATTGATATTCCATCCCGGTTTCATGCAACACAGAGCTTTGAAAAGGTCTGTTCCATCAAGATTCTTCGCACACCAAAGAACACGCGATGTCGACCTGCTCATTTTGCAGGTCGTAAACAGCTGCAATTATCGTCGTTTGGAGGAGGCATCCGCACGTATACTTCTGGTATCCTCAGGTTGCAGCACCAAACATCTCAACCCCTGCAAGCTTGTAAAAATAAGGGAATTGATGATCAACAGACATGGTAGACCATAATATACGGCTCATGTAGATGGCGCTGAAGTCACAACGATGAGTTATTGGTTTGTAGTTAAAATGATAAATGGAGCTTGCAGAAATATGTATTGTTAGTGTATAAACACAGATATGTTTATGTAATACAGCAATTTATTTCATACCATATATGGCAGAAGTGTGAGTGCATCGAGTCCTCCTGTACATCGGCACAGCAAGTAAGCTTATCGGCA

Coding sequence (CDS)

ATGCTGACCAGAGTTTGCAGCTTCCACCATTGTTTCTTCTTCTTCCTCCTTTTTGCCTATGGATTTCCGACGGTAGTCGAATCTGCGGAACGTGAGACCCCGTTATCCAATCCGTTGAGTCGAGACGAATGGAGGCAGATTGCAGGATATGGCGAGGAGAGACTGTCCACAGTTCTGGTCACAGGCTCTCTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCGAGTTCATGCATGGCCTGTAAAAGGTGCCATGGTGGGTGTGAAGTGCCACAACTCTGGAAAAAACAGCAAATCTTCTGATTGGGTACGTGGAATCACAGATGAATTTGGAGACTTCATTATTGATATTCCATCCCGGTTTCATGCAACACAGAGCTTTGAAAAGGTCTGTTCCATCAAGATTCTTCGCACACCAAAGAACACGCGATGTCGACCTGCTCATTTTGCAGGTCGTAAACAGCTGCAATTATCGTCGTTTGGAGGAGGCATCCGCACGTATACTTCTGGTATCCTCAGGTTGCAGCACCAAACATCTCAACCCCTGCAAGCTTGTAAAAATAAGGGAATTGATGATCAACAGACATGGTAG

Protein sequence

MLTRVCSFHHCFFFFLLFAYGFPTVVESAERETPLSNPLSRDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQTW

Homology

[Close]

BLAST of CmaCh18G006080 vs. TrEMBL
Match: A0A0A0LT20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181380 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 7.5e-89
Identity = 156/203 (76.85%), Postives = 174/203 (85.71%), Query Frame = 1


Query: 1   MLTRVCSFHH-------CFFFFLLFAYGFPTVVESAERETPLSNPLSRDEWRQIAGYGEE 60
           M+ RV SFH        C FFF L  +GFP V+ESAE ETP+S+ LSRD WR+IAGYGEE
Sbjct: 1   MVNRVWSFHSSVNLFWLCIFFFYLIGHGFPMVIESAEDETPVSDLLSRDHWREIAGYGEE 60

Query: 61  RLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSGKNSKSSDWVRGITDEFGD 120
           RLSTVLVTGS+LCEACLHGDEP+VHAWP+KGAMVGV CHN+GKNSKSSDWV G+TDEFGD
Sbjct: 61  RLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFGD 120

Query: 121 FIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPAHFAGRKQLQLSSFGGGIRTYTSGIL 180
           F+IDIPS  HAT+SFE VCSIKILRTPKNT CRPAH AGRK LQLSSFGGGIRTYTSG+L
Sbjct: 121 FVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGVL 180

Query: 181 RLQHQTSQPLQACKNKGIDDQQT 197
           RLQHQTS+PLQAC+N+G   +QT
Sbjct: 181 RLQHQTSRPLQACRNEGRGGRQT 203

[Close]

BLAST of CmaCh18G006080 vs. TrEMBL
Match: B9HCD0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00740g PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.4e-47
Identity = 91/168 (54.17%), Postives = 121/168 (72.02%), Query Frame = 1


Query: 28  SAERETPLSNPLSRDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMV 87
           +A+ E PL    S +E  Q AGYGEE+LSTVLVTG++LCEACLHG E ++HAWP+ GA+V
Sbjct: 33  TAKAENPLQEFSSTEELVQWAGYGEEKLSTVLVTGTVLCEACLHG-ENQLHAWPISGALV 92

Query: 88  GVKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRP 147
            V+CH S K SK S   + ITDE+GDF+ID+PS  H     E++CS+K+LR P+N+ CRP
Sbjct: 93  NVECHTSTKRSKKSS-AQAITDEYGDFLIDLPSHLHGIPHLERICSVKVLRLPQNSVCRP 152

Query: 148 AHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQ 196
           AH   +K L+LSS G GIR Y++G ++    TS+PLQAC  +G  D+Q
Sbjct: 153 AHARKQKALKLSSVGNGIRNYSAGEIKFLQVTSKPLQACNERGSSDKQ 198

[Close]

BLAST of CmaCh18G006080 vs. TrEMBL
Match: V4TRN7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016770mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.4e-47
Identity = 93/167 (55.69%), Postives = 120/167 (71.86%), Query Frame = 1


Query: 30  ERETPLSNPLS-RDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVG 89
           E E   S  LS R+E  Q+AGYGEE+LSTVLVTGS+LCEACLHG + ++ AWP+ GA+V 
Sbjct: 33  EEEMSSSYELSTREELVQMAGYGEEKLSTVLVTGSVLCEACLHGQDDQLRAWPITGALVS 92

Query: 90  VKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPA 149
           V CHNS +   S    +  TDE+GDF+ID+PS  HAT + +K CS+K+LR PKN+ CRPA
Sbjct: 93  VYCHNSHRKKISK--TQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPA 152

Query: 150 HFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQ 196
           +    K L+LSS G GIRTY +G +   H TS+PL+AC  KGI+D+Q
Sbjct: 153 YVKKHKGLKLSSVGNGIRTYAAGRIGFLHWTSKPLRACTGKGINDKQ 197

[Close]

BLAST of CmaCh18G006080 vs. TrEMBL
Match: A0A067GTA8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029046mg PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.0e-46
Identity = 92/167 (55.09%), Postives = 118/167 (70.66%), Query Frame = 1


Query: 30  ERETPLSNPLS-RDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVG 89
           E E   S  LS R+E  Q+AGYGEE+LSTVLVTG +LCEACLHG + ++ AWP+ GA+V 
Sbjct: 33  EEEMSSSYELSTREELVQMAGYGEEKLSTVLVTGFVLCEACLHGQDDQLRAWPITGALVS 92

Query: 90  VKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPA 149
           V CHNS +   S    +  TDE+GDF+ID+PS  HAT + +K CS+K+LR PKN+ CRPA
Sbjct: 93  VYCHNSHRKIISK--TQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPA 152

Query: 150 HFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQ 196
           +    K L+LSS G GIRTY +G +   H TS+PL+AC  KGI D+Q
Sbjct: 153 YVKKHKGLKLSSVGNGIRTYAAGRIGFLHWTSKPLRACTGKGISDKQ 197

[Close]

BLAST of CmaCh18G006080 vs. TrEMBL
Match: B9IH16_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00790g PE=4 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 3.9e-45
Identity = 91/194 (46.91%), Postives = 128/194 (65.98%), Query Frame = 1


Query: 2   LTRVCSFHHCFFFFLLFAYGFPTVVESAERETPLSNPLSRDEWRQIAGYGEERLSTVLVT 61
           LT + +F    F   +  +        A+ E PL    +R+E  Q+AGYGEE+LSTVLVT
Sbjct: 10  LTMITNFISTVFIIFIITFQ----ASMAKAENPLQEFSNREELVQLAGYGEEKLSTVLVT 69

Query: 62  GSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSR 121
           G++LCEACL+G    +HAWPV GA+V V+CH   K SK++   + +TDE+GDF+ID+PS 
Sbjct: 70  GTILCEACLNGGTQLLHAWPVSGALVYVECHTGVKWSKTTS-SQAMTDEYGDFLIDLPSH 129

Query: 122 FHATQSFEKVCSIKILRTPKNTRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQ 181
            H   + E+ CS+K+LR P+N+ CRPAH   +K L+LSS G GIR Y++G ++    TS+
Sbjct: 130 LHGIPNLERTCSVKVLRLPQNSVCRPAHARKQKALELSSVGNGIRNYSAGEIKFLQVTSK 189

Query: 182 PLQACKNKGIDDQQ 196
           PLQAC  +G  D+Q
Sbjct: 190 PLQACTQRGSSDKQ 198

[Close]

BLAST of CmaCh18G006080 vs. TAIR10
Match: AT5G47635.1 (AT5G47635.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-28
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 1


Query: 36  SNPLSRDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSG 95
           +N  +R E  ++AGYGE++LS+V++TGSLLC+       P +H+ P+ GA V +KCH   
Sbjct: 24  NNLWTRTEMVEMAGYGEQKLSSVVITGSLLCDT----SRPHLHSIPIPGATVAIKCHTGS 83

Query: 96  KNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPAHFAGRKQ 155
           K  + S W++ +TDE G+F ID+PS+ HA    E  C IK +  P+  RC        K 
Sbjct: 84  K--RRSKWIKAVTDELGEFEIDLPSQLHAIPHLENTCFIKPVYVPRPYRCYNTSTNIHKP 143

Query: 156 LQLSSFGGGIRTYTSGILRLQHQTSQ 182
           ++L S   G R YTSG +RLQ  +S+
Sbjct: 144 IKLVSSTNGFRVYTSGKIRLQGHSSR 163

[Close]

BLAST of CmaCh18G006080 vs. TAIR10
Match: AT4G17215.1 (AT4G17215.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 111.7 bits (278), Expect = 5.2e-25
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 1


Query: 15  FLLFAYGFPTVVESAERETPLSNPLSRDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDE 74
           FLL +     +V   E     S+  SRDE  ++AGYGE++LS+VL+T SLL  +      
Sbjct: 3   FLLMSMTLVLIVTFGEA---FSDRWSRDEMVEMAGYGEQKLSSVLLTASLLSSS------ 62

Query: 75  PRVHAWPVKGAMVGVKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSI 134
               + P+ GA +G KCH   +  + S W++ +T+E G F+ID+PS  HA    +K C I
Sbjct: 63  ----SSPIHGATIGFKCHTGHR--RRSKWIKAVTNELGQFVIDLPSHLHAIPDLDKACII 122

Query: 135 KILRTPKNTRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQT 180
           K L  PK  RC      G   +QL S   G R YT+G + LQ  T
Sbjct: 123 KTLSVPKPYRCSSKIHRG---IQLLSSSNGSRVYTAGNITLQEST 149

[Close]

BLAST of CmaCh18G006080 vs. TAIR10
Match: AT2G40113.1 (AT2G40113.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23
Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 1


Query: 43  EWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSGKNSKSSD 102
           E   +AGYGE +LS+V++TGSLLC              PV GA V +KCH   K  + S 
Sbjct: 32  EMSDMAGYGEHKLSSVVITGSLLCNT------------PVSGATVAIKCHTGLK--QRSK 91

Query: 103 WVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKN-TRCRPAHFAG--RKQLQLS 162
           W++ +T++FG+F+I +PS  HA    EK C +K +  PK+  RC          K ++L 
Sbjct: 92  WIKSVTNDFGEFVIHLPSHLHAIPQLEKACFVKPIHVPKHYHRCYHTFSKSNIHKDIKLV 151

Query: 163 SFGGGIRTYTSGILRL----QHQTSQPLQA 186
           S   G R YTSG ++L      +TSQP +A
Sbjct: 152 SSRNGFRVYTSGTIKLHGGHSSRTSQPHKA 167

[Close]

BLAST of CmaCh18G006080 vs. NCBI nr
Match: gi|659127237|ref|XP_008463598.1| (PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 4.8e-89
Identity = 156/203 (76.85%), Postives = 175/203 (86.21%), Query Frame = 1


Query: 1   MLTRVCSFHH-------CFFFFLLFAYGFPTVVESAERETPLSNPLSRDEWRQIAGYGEE 60
           M+ RV SFH        C FFF L  +GFP V ESAE ETP+S+ L+RD WR+IAGYGEE
Sbjct: 1   MMNRVWSFHCSVNLFWLCIFFFYLIGHGFPMVTESAEDETPVSDLLNRDHWREIAGYGEE 60

Query: 61  RLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSGKNSKSSDWVRGITDEFGD 120
           RLSTVLVTGS+LCE+CLHGDEP+VHAWP++GAMVGV CHN+GKNSKSSDWV G+TDEFGD
Sbjct: 61  RLSTVLVTGSVLCESCLHGDEPQVHAWPIRGAMVGVNCHNTGKNSKSSDWVHGVTDEFGD 120

Query: 121 FIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPAHFAGRKQLQLSSFGGGIRTYTSGIL 180
           F+IDIPSR HATQSFE VCSIKILRTPKNT CRPAH AGRKQLQLSSFGGGIRTYTSG+L
Sbjct: 121 FVIDIPSRLHATQSFENVCSIKILRTPKNTHCRPAHLAGRKQLQLSSFGGGIRTYTSGVL 180

Query: 181 RLQHQTSQPLQACKNKGIDDQQT 197
           RLQHQTS+PLQAC+N+G   +QT
Sbjct: 181 RLQHQTSRPLQACRNEGRSGRQT 203

[Close]

BLAST of CmaCh18G006080 vs. NCBI nr
Match: gi|449443524|ref|XP_004139527.1| (PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-88
Identity = 156/203 (76.85%), Postives = 174/203 (85.71%), Query Frame = 1


Query: 1   MLTRVCSFHH-------CFFFFLLFAYGFPTVVESAERETPLSNPLSRDEWRQIAGYGEE 60
           M+ RV SFH        C FFF L  +GFP V+ESAE ETP+S+ LSRD WR+IAGYGEE
Sbjct: 1   MVNRVWSFHSSVNLFWLCIFFFYLIGHGFPMVIESAEDETPVSDLLSRDHWREIAGYGEE 60

Query: 61  RLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVGVKCHNSGKNSKSSDWVRGITDEFGD 120
           RLSTVLVTGS+LCEACLHGDEP+VHAWP+KGAMVGV CHN+GKNSKSSDWV G+TDEFGD
Sbjct: 61  RLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFGD 120

Query: 121 FIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPAHFAGRKQLQLSSFGGGIRTYTSGIL 180
           F+IDIPS  HAT+SFE VCSIKILRTPKNT CRPAH AGRK LQLSSFGGGIRTYTSG+L
Sbjct: 121 FVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGVL 180

Query: 181 RLQHQTSQPLQACKNKGIDDQQT 197
           RLQHQTS+PLQAC+N+G   +QT
Sbjct: 181 RLQHQTSRPLQACRNEGRGGRQT 203

[Close]

BLAST of CmaCh18G006080 vs. NCBI nr
Match: gi|224086338|ref|XP_002307854.1| (hypothetical protein POPTR_0006s00740g [Populus trichocarpa])

HSP 1 Score: 195.7 bits (496), Expect = 7.8e-47
Identity = 91/168 (54.17%), Postives = 121/168 (72.02%), Query Frame = 1


Query: 28  SAERETPLSNPLSRDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMV 87
           +A+ E PL    S +E  Q AGYGEE+LSTVLVTG++LCEACLHG E ++HAWP+ GA+V
Sbjct: 33  TAKAENPLQEFSSTEELVQWAGYGEEKLSTVLVTGTVLCEACLHG-ENQLHAWPISGALV 92

Query: 88  GVKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRP 147
            V+CH S K SK S   + ITDE+GDF+ID+PS  H     E++CS+K+LR P+N+ CRP
Sbjct: 93  NVECHTSTKRSKKSS-AQAITDEYGDFLIDLPSHLHGIPHLERICSVKVLRLPQNSVCRP 152

Query: 148 AHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQ 196
           AH   +K L+LSS G GIR Y++G ++    TS+PLQAC  +G  D+Q
Sbjct: 153 AHARKQKALKLSSVGNGIRNYSAGEIKFLQVTSKPLQACNERGSSDKQ 198

[Close]

BLAST of CmaCh18G006080 vs. NCBI nr
Match: gi|567915229|ref|XP_006449928.1| (hypothetical protein CICLE_v10016770mg [Citrus clementina])

HSP 1 Score: 195.7 bits (496), Expect = 7.8e-47
Identity = 93/167 (55.69%), Postives = 120/167 (71.86%), Query Frame = 1


Query: 30  ERETPLSNPLS-RDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVG 89
           E E   S  LS R+E  Q+AGYGEE+LSTVLVTGS+LCEACLHG + ++ AWP+ GA+V 
Sbjct: 33  EEEMSSSYELSTREELVQMAGYGEEKLSTVLVTGSVLCEACLHGQDDQLRAWPITGALVS 92

Query: 90  VKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPA 149
           V CHNS +   S    +  TDE+GDF+ID+PS  HAT + +K CS+K+LR PKN+ CRPA
Sbjct: 93  VYCHNSHRKKISK--TQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPA 152

Query: 150 HFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQ 196
           +    K L+LSS G GIRTY +G +   H TS+PL+AC  KGI+D+Q
Sbjct: 153 YVKKHKGLKLSSVGNGIRTYAAGRIGFLHWTSKPLRACTGKGINDKQ 197

[Close]

BLAST of CmaCh18G006080 vs. NCBI nr
Match: gi|568825817|ref|XP_006467274.1| (PREDICTED: uncharacterized protein LOC102611527 [Citrus sinensis])

HSP 1 Score: 192.2 bits (487), Expect = 8.6e-46
Identity = 92/167 (55.09%), Postives = 118/167 (70.66%), Query Frame = 1


Query: 30  ERETPLSNPLS-RDEWRQIAGYGEERLSTVLVTGSLLCEACLHGDEPRVHAWPVKGAMVG 89
           E E   S  LS R+E  Q+AGYGEE+LSTVLVTG +LCEACLHG + ++ AWP+ GA+V 
Sbjct: 33  EEEMSSSYELSTREELVQMAGYGEEKLSTVLVTGFVLCEACLHGQDDQLRAWPITGALVS 92

Query: 90  VKCHNSGKNSKSSDWVRGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNTRCRPA 149
           V CHNS +   S    +  TDE+GDF+ID+PS  HAT + +K CS+K+LR PKN+ CRPA
Sbjct: 93  VYCHNSHRKIISK--TQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPA 152

Query: 150 HFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQ 196
           +    K L+LSS G GIRTY +G +   H TS+PL+AC  KGI D+Q
Sbjct: 153 YVKKHKGLKLSSVGNGIRTYAAGRIGFLHWTSKPLRACTGKGISDKQ 197

The following BLAST results are available for this feature:

BLAST of CmaCh18G006080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh18G006080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT20_CUCSA	7.5e-89	76.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181380 PE=4 SV=1	[more]
B9HCD0_POPTR	5.4e-47	54.17	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00740g PE=4 SV=1	[more]
V4TRN7_9ROSI	5.4e-47	55.69	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016770mg PE=4 SV=1	[more]
A0A067GTA8_CITSI	6.0e-46	55.09	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029046mg PE=4 SV=1	[more]
B9IH16_POPTR	3.9e-45	46.91	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00790g PE=4 SV=2	[more]

BLAST of CmaCh18G006080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47635.1	1.0e-28	41.10	Pollen Ole e 1 allergen and extensin family protein	[more]
AT4G17215.1	5.2e-25	38.18	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G40113.1	4.9e-23	38.67	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of CmaCh18G006080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127237\|ref\|XP_008463598.1\|	4.8e-89	76.85	PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo]	[more]
gi\|449443524\|ref\|XP_004139527.1\|	1.1e-88	76.85	PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus]	[more]
gi\|224086338\|ref\|XP_002307854.1\|	7.8e-47	54.17	hypothetical protein POPTR_0006s00740g [Populus trichocarpa]	[more]
gi\|567915229\|ref\|XP_006449928.1\|	7.8e-47	55.69	hypothetical protein CICLE_v10016770mg [Citrus clementina]	[more]
gi\|568825817\|ref\|XP_006467274.1\|	8.6e-46	55.09	PREDICTED: uncharacterized protein LOC102611527 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006080.1	CmaCh18G006080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33210	FAMILY NOT NAMED	coord: 20..171 score: 5.5
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 60..146 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G006080	Cucsa.180590	Cucumber (Gy14) v1	cgycmaB0514
CmaCh18G006080	Cla009058	Watermelon (97103) v1	cmawmB381
CmaCh18G006080	Csa1G181380	Cucumber (Chinese Long) v2	cmacuB399
CmaCh18G006080	MELO3C025526	Melon (DHL92) v3.5.1	cmameB366
CmaCh18G006080	ClCG01G010750	Watermelon (Charleston Gray)	cmawcgB341
CmaCh18G006080	CSPI01G15650	Wild cucumber (PI 183967)	cmacpiB403
CmaCh18G006080	CmoCh18G005830	Cucurbita moschata (Rifu)	cmacmoB411
CmaCh18G006080	CmoCh13G004160	Cucurbita moschata (Rifu)	cmacmoB396
CmaCh18G006080	Lsi02G011330	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G006080	Cp4.1LG09g06450	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G006080	Cp4.1LG20g06530	Cucurbita pepo (Zucchini)	cmacpeB444
CmaCh18G006080	MELO3C025526.2	Melon (DHL92) v3.6.1	cmamedB414
CmaCh18G006080	CsaV3_1G015780	Cucumber (Chinese Long) v3	cmacucB0476
CmaCh18G006080	CsaV3_UNG065500	Cucumber (Chinese Long) v3	cmacucB0510
CmaCh18G006080	Cla97C01G010510	Watermelon (97103) v2	cmawmbB394
CmaCh18G006080	Bhi08G000623	Wax gourd	cmawgoB0535
CmaCh18G006080	CsGy1G015360	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G006080	Carg25119	Silver-seed gourd	carcmaB1436

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G006080	CmaCh13G003900	Cucurbita maxima (Rimu)	cmacmaB212

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G006080	Wax gourd	cmawgoB0515
CmaCh18G006080	Cucurbita maxima (Rimu)	cmacmaB211
CmaCh18G006080	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G006080	Cucurbita maxima (Rimu)	cmacmaB399
CmaCh18G006080	Cucumber (Gy14) v1	cgycmaB0040
CmaCh18G006080	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G006080	Cucurbita moschata (Rifu)	cmacmoB395
CmaCh18G006080	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G006080	Cucurbita moschata (Rifu)	cmacmoB419
CmaCh18G006080	Cucurbita moschata (Rifu)	cmacmoB428
CmaCh18G006080	Wild cucumber (PI 183967)	cmacpiB428
CmaCh18G006080	Cucumber (Chinese Long) v2	cmacuB425
CmaCh18G006080	Watermelon (Charleston Gray)	cmawcgB349
CmaCh18G006080	Watermelon (97103) v1	cmawmB389
CmaCh18G006080	Cucurbita pepo (Zucchini)	cmacpeB419
CmaCh18G006080	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G006080	Bottle gourd (USVL1VR-Ls)	cmalsiB367
CmaCh18G006080	Cucumber (Gy14) v2	cgybcmaB771
CmaCh18G006080	Silver-seed gourd	carcmaB0060
CmaCh18G006080	Silver-seed gourd	carcmaB0562
CmaCh18G006080	Silver-seed gourd	carcmaB0907
CmaCh18G006080	Cucumber (Chinese Long) v3	cmacucB0509
CmaCh18G006080	Watermelon (97103) v2	cmawmbB402