CmaCh13G003900 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G003900
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPollen Ole e 1 allergen and extensin family protein, putative
LocationCma_Chr13 : 4475954 .. 4477189 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCAACATAGAGGAACTGCCTGGTCAACGTCAAACCCGGAAGGGGTATTTCTGTAAATTCGATGTGTAGGGTCGTCTCTTTTGTTATAACATTATATAAACCAATGCATATGTATCTAAAAATGGTGTCAGATTGATTGATAAAGCAAGATGATTACCAGAGTTTGTAGCTTCCACAATTCTGTCAGCCTGTTTTCGCTTCATTTCTTCTTCTTCTTCCTCCTTTTCGGCCATGGATTTCCGATGGTAGTCGAATCTGCAGAAGGTGAGACCCCGTTATCCGATCTTTTGGGTCGAGATGATTGGAGGCAGATAGCTGGATATGGTGAGGAAAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACATCAAGTTCATGCATGGCCTATTGAAGGTAACACAATGGCAGCTAATTTCTTAGTTCAAAAACACCACCTATGAAATCAAGCTTGGTTTTTACCTTTCTGATGATTATAAAATCAATCACTGCAGGTGCCATGGTGGGTGTGAATTGCAAGAACACTGGAAAAAACAGCAAATCTTATGAATGGGTTAATGGAGTTACCGATGAATTTGGAGACTTTGTTATTGATATTCCATCCCATCTTCATGCAATCCGCAGCTTCGAAAAGGCCTGTTCTATCAAGATTCTTCGGACACCAAAGAACACACGCTGTCGACCTGCTCATTTAGCTGGCAGTGAACAGCTGCAATTATCGTCGTTCGGAGGTGGCACAAGGACATATACTTCTGGTATCCTTAGGCTGCAGCACCAAACATCTCGACCTCTGCAAGCTTGTATAAGAGGGGAGGATTAACCATCAGACCACAAGAGAAGCCTAGTAAAGTGAATTAATTGGTTACAGACCAGAATATATGGCTCATGTAGATGGCGCTGAAGTCACAATGATGAGTTATTCGTTCATAGTTAGCACGATAAATCGAGCTTGCATAAATATGTATCGTTTGTGTATAAAAACATCTAGATTATGAAATACCGCAGTCTATTTCATACCAAATGCGACAGATGCTGCATCGAGTCTTCCACACAGTTGAACTTACTCACAAGGTGTAATTCTACCCTTAAAATTCTATTGGGAGCCAAAGAGATCTTGTGTTCTTTAACAATCAGTGCATAGCCTGATGGATGATCTAATCCCAAACAAAAGATGAACTATCATAAGATCAGTTCATATAGCGAACGA

mRNA sequence

AATCCAACATAGAGGAACTGCCTGGTCAACGTCAAACCCGGAAGGGATTGATTGATAAAGCAAGATGATTACCAGAGTTTGTAGCTTCCACAATTCTGTCAGCCTGTTTTCGCTTCATTTCTTCTTCTTCTTCCTCCTTTTCGGCCATGGATTTCCGATGGTAGTCGAATCTGCAGAAGGTGAGACCCCGTTATCCGATCTTTTGGGTCGAGATGATTGGAGGCAGATAGCTGGATATGGTGAGGAAAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACATCAAGTTCATGCATGGCCTATTGAAGGTGCCATGGTGGGTGTGAATTGCAAGAACACTGGAAAAAACAGCAAATCTTATGAATGGGTTAATGGAGTTACCGATGAATTTGGAGACTTTGTTATTGATATTCCATCCCATCTTCATGCAATCCGCAGCTTCGAAAAGGCCTGTTCTATCAAGATTCTTCGGACACCAAAGAACACACGCTGTCGACCTGCTCATTTAGCTGGCAGTGAACAGCTGCAATTATCGTCGTTCGGAGGTGGCACAAGGACATATACTTCTGGTATCCTTAGGCTGCAGCACCAAACATCTCGACCTCTGCAAGCTTGTATAAGAGGGGAGGATTAACCATCAGACCACAAGAGAAGCCTAGTAAAGTGAATTAATTGGTTACAGACCAGAATATATGGCTCATGTAGATGGCGCTGAAGTCACAATGATGAGTTATTCGTTCATAGTTAGCACGATAAATCGAGCTTGCATAAATATGTATCGTTTGTGTATAAAAACATCTAGATTATGAAATACCGCAGTCTATTTCATACCAAATGCGACAGATGCTGCATCGAGTCTTCCACACAGTTGAACTTACTCACAAGGTGTAATTCTACCCTTAAAATTCTATTGGGAGCCAAAGAGATCTTGTGTTCTTTAACAATCAGTGCATAGCCTGATGGATGATCTAATCCCAAACAAAAGATGAACTATCATAAGATCAGTTCATATAGCGAACGA

Coding sequence (CDS)

ATGATTACCAGAGTTTGTAGCTTCCACAATTCTGTCAGCCTGTTTTCGCTTCATTTCTTCTTCTTCTTCCTCCTTTTCGGCCATGGATTTCCGATGGTAGTCGAATCTGCAGAAGGTGAGACCCCGTTATCCGATCTTTTGGGTCGAGATGATTGGAGGCAGATAGCTGGATATGGTGAGGAAAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACATCAAGTTCATGCATGGCCTATTGAAGGTGCCATGGTGGGTGTGAATTGCAAGAACACTGGAAAAAACAGCAAATCTTATGAATGGGTTAATGGAGTTACCGATGAATTTGGAGACTTTGTTATTGATATTCCATCCCATCTTCATGCAATCCGCAGCTTCGAAAAGGCCTGTTCTATCAAGATTCTTCGGACACCAAAGAACACACGCTGTCGACCTGCTCATTTAGCTGGCAGTGAACAGCTGCAATTATCGTCGTTCGGAGGTGGCACAAGGACATATACTTCTGGTATCCTTAGGCTGCAGCACCAAACATCTCGACCTCTGCAAGCTTGTATAAGAGGGGAGGATTAA

Protein sequence

MITRVCSFHNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQHQTSRPLQACIRGED
Homology
[Close]
BLAST of CmaCh13G003900 vs. TrEMBL
Match: A0A0A0LT20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181380 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-90
Identity = 162/194 (83.51%), Postives = 175/194 (90.21%), Query Frame = 1 

Query: 1   MITRVCSFHNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGE 60
           M+ RV SFH+SV+LF L  FFF+L+ GHGFPMV+ESAE ETP+SDLL RD WR+IAGYGE
Sbjct: 1   MVNRVWSFHSSVNLFWLCIFFFYLI-GHGFPMVIESAEDETPVSDLLSRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120
           ERLSTVLVTGSVLCEACLHGDE QVHAWPI+GAMVGVNC NTGKNSKS +WV+GVTDEFG
Sbjct: 61  ERLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGI 180
           DFVIDIPSHLHA RSFE  CSIKILRTPKNT CRPAHLAG + LQLSSFGGG RTYTSG+
Sbjct: 121 DFVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSRPLQAC 195
           LRLQHQTSRPLQAC
Sbjct: 181 LRLQHQTSRPLQAC 193

[Close]
BLAST of CmaCh13G003900 vs. TrEMBL
Match: B9HCD0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00740g PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.7e-44
Identity = 90/186 (48.39%), Postives = 124/186 (66.67%), Query Frame = 1 

Query: 9   HNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLV 68
           +N V++ +      F++F     +   +A+ E PL +    ++  Q AGYGEE+LSTVLV
Sbjct: 8   NNLVTMMNFIISTIFIIFT--ITLQASTAKAENPLQEFSSTEELVQWAGYGEEKLSTVLV 67

Query: 69  TGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPS 128
           TG+VLCEACLHG E+Q+HAWPI GA+V V C  + K SK       +TDE+GDF+ID+PS
Sbjct: 68  TGTVLCEACLHG-ENQLHAWPISGALVNVECHTSTKRSKKSS-AQAITDEYGDFLIDLPS 127

Query: 129 HLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQHQTS 188
           HLH I   E+ CS+K+LR P+N+ CRPAH    + L+LSS G G R Y++G ++    TS
Sbjct: 128 HLHGIPHLERICSVKVLRLPQNSVCRPAHARKQKALKLSSVGNGIRNYSAGEIKFLQVTS 187

Query: 189 RPLQAC 195
           +PLQAC
Sbjct: 188 KPLQAC 189

[Close]
BLAST of CmaCh13G003900 vs. TrEMBL
Match: W9QNL1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010612 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-43
Identity = 91/184 (49.46%), Postives = 122/184 (66.30%), Query Frame = 1 

Query: 15  FSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLC 74
           F++   FFFL   +G  M     E    L +   R++  +IAGYGEE+LSTVL+TGSV C
Sbjct: 18  FTILISFFFL---NGISMAEHDHEDNNHLFESYSREELVKIAGYGEEKLSTVLITGSVHC 77

Query: 75  EACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHAIR 134
           EACL  +E Q++AWP+ GA+V VNC   GK  KS  W   VTDE+GDF +D+PS+LHAI 
Sbjct: 78  EACL--NEAQLYAWPVSGALVAVNCHINGKKGKS-SWTKCVTDEYGDFAVDLPSNLHAIP 137

Query: 135 SFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQHQTSRPLQAC 194
           + ++ CS+K+LR PKN+ CRPA++  ++ L+  S G G RTY +G +R QH TSR  Q C
Sbjct: 138 NLDRKCSVKVLRVPKNSLCRPANVRRNKGLRFLSVGNGIRTYDAGAIRFQHLTSRLTQGC 195

Query: 195 IRGE 199
            R E
Sbjct: 198 GRKE 195

[Close]
BLAST of CmaCh13G003900 vs. TrEMBL
Match: A0A059CAY9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03855 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-42
Identity = 82/148 (55.41%), Postives = 110/148 (74.32%), Query Frame = 1 

Query: 49  RDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKS 108
           RD+  ++AGYGEE+LSTVLVTGSVLCEACL GD  Q+HAWP+ GA V VNC    K SKS
Sbjct: 19  RDEMVEMAGYGEEKLSTVLVTGSVLCEACLPGDP-QLHAWPLSGASVAVNCHADDKESKS 78

Query: 109 YEWVNGVTDEFGDFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSS 168
              ++G+TDE GDF ID+PS LHA+ +  K CS+ ++R P+N+ CRPAH+   ++++LSS
Sbjct: 79  SR-IHGLTDENGDFFIDLPSELHAVPNLNKRCSVNLVRMPRNSLCRPAHIRKHKRVRLSS 138

Query: 169 FGGGTRTYTSGILRLQHQTSRPLQACIR 197
            G G RTY +G +RLQH  + P +AC++
Sbjct: 139 VGNGIRTYEAGTIRLQHSATEPTEACMK 164

[Close]
BLAST of CmaCh13G003900 vs. TrEMBL
Match: V4TRN7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016770mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-42
Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 1 

Query: 45  DLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGK 104
           +L  R++  Q+AGYGEE+LSTVLVTGSVLCEACLHG + Q+ AWPI GA+V V C N+ +
Sbjct: 41  ELSTREELVQMAGYGEEKLSTVLVTGSVLCEACLHGQDDQLRAWPITGALVSVYCHNSHR 100

Query: 105 NSKSYEWVNGVTDEFGDFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQL 164
             K        TDE+GDF+ID+PSHLHA  + +K CS+K+LR PKN+ CRPA++   + L
Sbjct: 101 --KKISKTQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPAYVKKHKGL 160

Query: 165 QLSSFGGGTRTYTSGILRLQHQTSRPLQAC 195
           +LSS G G RTY +G +   H TS+PL+AC
Sbjct: 161 KLSSVGNGIRTYAAGRIGFLHWTSKPLRAC 188

[Close]
BLAST of CmaCh13G003900 vs. TAIR10
Match: AT4G17215.1 (AT4G17215.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 68/165 (41.21%), Postives = 92/165 (55.76%), Query Frame = 1 

Query: 23  FLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDE 82
           FLL      ++V   E     SD   RD+  ++AGYGE++LS+VL+T S+L  +      
Sbjct: 3   FLLMSMTLVLIVTFGEA---FSDRWSRDEMVEMAGYGEQKLSSVLLTASLLSSS------ 62

Query: 83  HQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHAIRSFEKACSI 142
               + PI GA +G  C +TG   +S +W+  VT+E G FVID+PSHLHAI   +KAC I
Sbjct: 63  ----SSPIHGATIGFKC-HTGHRRRS-KWIKAVTNELGQFVIDLPSHLHAIPDLDKACII 122

Query: 143 KILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQHQT 188
           K L  PK  RC      G   +QL S   G+R YT+G + LQ  T
Sbjct: 123 KTLSVPKPYRCSSKIHRG---IQLLSSSNGSRVYTAGNITLQEST 149

[Close]
BLAST of CmaCh13G003900 vs. TAIR10
Match: AT5G47635.1 (AT5G47635.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.1e-26
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 1 

Query: 44  SDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTG 103
           ++L  R +  ++AGYGE++LS+V++TGS+LC+         +H+ PI GA V + C +TG
Sbjct: 24  NNLWTRTEMVEMAGYGEQKLSSVVITGSLLCDT----SRPHLHSIPIPGATVAIKC-HTG 83

Query: 104 KNSKSYEWVNGVTDEFGDFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQ 163
              +S +W+  VTDE G+F ID+PS LHAI   E  C IK +  P+  RC        + 
Sbjct: 84  SKRRS-KWIKAVTDELGEFEIDLPSQLHAIPHLENTCFIKPVYVPRPYRCYNTSTNIHKP 143

Query: 164 LQLSSFGGGTRTYTSGILRLQHQTSR 190
           ++L S   G R YTSG +RLQ  +SR
Sbjct: 144 IKLVSSTNGFRVYTSGKIRLQGHSSR 163

[Close]
BLAST of CmaCh13G003900 vs. TAIR10
Match: AT2G40113.1 (AT2G40113.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 99.4 bits (246), Expect = 2.7e-21
Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 1 

Query: 12  VSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGS 71
           +  F L FFFF   F                 S L    +   +AGYGE +LS+V++TGS
Sbjct: 7   IRCFLLLFFFFNGAFAAS--------------SKLWSIREMSDMAGYGEHKLSSVVITGS 66

Query: 72  VLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLH 131
           +LC              P+ GA V + C +TG   +S +W+  VT++FG+FVI +PSHLH
Sbjct: 67  LLCNT------------PVSGATVAIKC-HTGLKQRS-KWIKSVTNDFGEFVIHLPSHLH 126

Query: 132 AIRSFEKACSIKILRTPKN-TRCRPAHLAGS--EQLQLSSFGGGTRTYTSGILRL----Q 191
           AI   EKAC +K +  PK+  RC       +  + ++L S   G R YTSG ++L     
Sbjct: 127 AIPQLEKACFVKPIHVPKHYHRCYHTFSKSNIHKDIKLVSSRNGFRVYTSGTIKLHGGHS 167

Query: 192 HQTSRPLQA 194
            +TS+P +A
Sbjct: 187 SRTSQPHKA 167

[Close]
BLAST of CmaCh13G003900 vs. NCBI nr
Match: gi|449443524|ref|XP_004139527.1| (PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-90
Identity = 162/194 (83.51%), Postives = 175/194 (90.21%), Query Frame = 1 

Query: 1   MITRVCSFHNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGE 60
           M+ RV SFH+SV+LF L  FFF+L+ GHGFPMV+ESAE ETP+SDLL RD WR+IAGYGE
Sbjct: 1   MVNRVWSFHSSVNLFWLCIFFFYLI-GHGFPMVIESAEDETPVSDLLSRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120
           ERLSTVLVTGSVLCEACLHGDE QVHAWPI+GAMVGVNC NTGKNSKS +WV+GVTDEFG
Sbjct: 61  ERLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGI 180
           DFVIDIPSHLHA RSFE  CSIKILRTPKNT CRPAHLAG + LQLSSFGGG RTYTSG+
Sbjct: 121 DFVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSRPLQAC 195
           LRLQHQTSRPLQAC
Sbjct: 181 LRLQHQTSRPLQAC 193

[Close]
BLAST of CmaCh13G003900 vs. NCBI nr
Match: gi|659127237|ref|XP_008463598.1| (PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 2.4e-88
Identity = 160/194 (82.47%), Postives = 172/194 (88.66%), Query Frame = 1 

Query: 1   MITRVCSFHNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGE 60
           M+ RV SFH SV+LF L  FFF+L+ GHGFPMV ESAE ETP+SDLL RD WR+IAGYGE
Sbjct: 1   MMNRVWSFHCSVNLFWLCIFFFYLI-GHGFPMVTESAEDETPVSDLLNRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120
           ERLSTVLVTGSVLCE+CLHGDE QVHAWPI GAMVGVNC NTGKNSKS +WV+GVTDEFG
Sbjct: 61  ERLSTVLVTGSVLCESCLHGDEPQVHAWPIRGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGI 180
           DFVIDIPS LHA +SFE  CSIKILRTPKNT CRPAHLAG +QLQLSSFGGG RTYTSG+
Sbjct: 121 DFVIDIPSRLHATQSFENVCSIKILRTPKNTHCRPAHLAGRKQLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSRPLQAC 195
           LRLQHQTSRPLQAC
Sbjct: 181 LRLQHQTSRPLQAC 193

[Close]
BLAST of CmaCh13G003900 vs. NCBI nr
Match: gi|1009107478|ref|XP_015879943.1| (PREDICTED: uncharacterized protein LOC107416006 [Ziziphus jujuba])

HSP 1 Score: 186.0 bits (471), Expect = 6.2e-44
Identity = 88/191 (46.07%), Postives = 123/191 (64.40%), Query Frame = 1 

Query: 6   CSFHNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLST 65
           C  +N V ++ L  FFF             +   E  L +L  R+D  Q+AGYGEE+LST
Sbjct: 10  CGSNNLVMMYILFIFFFI--------RSSMAEHDEDQLFELFSREDMVQVAGYGEEKLST 69

Query: 66  VLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVID 125
           VL++GSV CE CLH  + Q+HAWP+ G +VG+N     K SKS  WV  VTDEFGDF ID
Sbjct: 70  VLISGSVHCETCLH--DAQLHAWPMSGVLVGINFHKNSKRSKS-NWVRAVTDEFGDFTID 129

Query: 126 IPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQH 185
           +PS+LH+I + +K+C +K+LR PK + C+P H+   + L+LSS   G RTY +G +R QH
Sbjct: 130 LPSNLHSIPNLDKSCRVKVLRLPKKSMCQPTHVRRHKGLRLSSIQNGVRTYNAGRIRFQH 189

Query: 186 QTSRPLQACIR 197
            +S P++AC++
Sbjct: 190 SSSTPIEACVK 189

[Close]
BLAST of CmaCh13G003900 vs. NCBI nr
Match: gi|224086338|ref|XP_002307854.1| (hypothetical protein POPTR_0006s00740g [Populus trichocarpa])

HSP 1 Score: 185.7 bits (470), Expect = 8.1e-44
Identity = 90/186 (48.39%), Postives = 124/186 (66.67%), Query Frame = 1 

Query: 9   HNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLV 68
           +N V++ +      F++F     +   +A+ E PL +    ++  Q AGYGEE+LSTVLV
Sbjct: 8   NNLVTMMNFIISTIFIIFT--ITLQASTAKAENPLQEFSSTEELVQWAGYGEEKLSTVLV 67

Query: 69  TGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPS 128
           TG+VLCEACLHG E+Q+HAWPI GA+V V C  + K SK       +TDE+GDF+ID+PS
Sbjct: 68  TGTVLCEACLHG-ENQLHAWPISGALVNVECHTSTKRSKKSS-AQAITDEYGDFLIDLPS 127

Query: 129 HLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQHQTS 188
           HLH I   E+ CS+K+LR P+N+ CRPAH    + L+LSS G G R Y++G ++    TS
Sbjct: 128 HLHGIPHLERICSVKVLRLPQNSVCRPAHARKQKALKLSSVGNGIRNYSAGEIKFLQVTS 187

Query: 189 RPLQAC 195
           +PLQAC
Sbjct: 188 KPLQAC 189

[Close]
BLAST of CmaCh13G003900 vs. NCBI nr
Match: gi|703066239|ref|XP_010087660.1| (hypothetical protein L484_010612 [Morus notabilis])

HSP 1 Score: 183.0 bits (463), Expect = 5.3e-43
Identity = 91/184 (49.46%), Postives = 122/184 (66.30%), Query Frame = 1 

Query: 15  FSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLC 74
           F++   FFFL   +G  M     E    L +   R++  +IAGYGEE+LSTVL+TGSV C
Sbjct: 18  FTILISFFFL---NGISMAEHDHEDNNHLFESYSREELVKIAGYGEEKLSTVLITGSVHC 77

Query: 75  EACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHAIR 134
           EACL  +E Q++AWP+ GA+V VNC   GK  KS  W   VTDE+GDF +D+PS+LHAI 
Sbjct: 78  EACL--NEAQLYAWPVSGALVAVNCHINGKKGKS-SWTKCVTDEYGDFAVDLPSNLHAIP 137

Query: 135 SFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGILRLQHQTSRPLQAC 194
           + ++ CS+K+LR PKN+ CRPA++  ++ L+  S G G RTY +G +R QH TSR  Q C
Sbjct: 138 NLDRKCSVKVLRVPKNSLCRPANVRRNKGLRFLSVGNGIRTYDAGAIRFQHLTSRLTQGC 195

Query: 195 IRGE 199
            R E
Sbjct: 198 GRKE 195

The following BLAST results are available for this feature:
BLAST of CmaCh13G003900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh13G003900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT20_CUCSA1.1e-9083.51Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181380 PE=4 SV=1[more]
B9HCD0_POPTR5.7e-4448.39Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00740g PE=4 SV=1[more]
W9QNL1_9ROSA3.7e-4349.46Uncharacterized protein OS=Morus notabilis GN=L484_010612 PE=4 SV=1[more]
A0A059CAY9_EUCGR1.8e-4255.41Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03855 PE=4 SV=1[more]
V4TRN7_9ROSI1.8e-4255.33Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016770mg PE=4 SV=1[more]
BLAST of CmaCh13G003900 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17215.16.2e-2641.21 Pollen Ole e 1 allergen and extensin family protein[more]
AT5G47635.18.1e-2641.10 Pollen Ole e 1 allergen and extensin family protein[more]
AT2G40113.12.7e-2135.45 Pollen Ole e 1 allergen and extensin family protein[more]
BLAST of CmaCh13G003900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443524|ref|XP_004139527.1|1.5e-9083.51PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus][more]
gi|659127237|ref|XP_008463598.1|2.4e-8882.47PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo][more]
gi|1009107478|ref|XP_015879943.1|6.2e-4446.07PREDICTED: uncharacterized protein LOC107416006 [Ziziphus jujuba][more]
gi|224086338|ref|XP_002307854.1|8.1e-4448.39hypothetical protein POPTR_0006s00740g [Populus trichocarpa][more]
gi|703066239|ref|XP_010087660.1|5.3e-4349.46hypothetical protein L484_010612 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G003900.1CmaCh13G003900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33210FAMILY NOT NAMEDcoord: 28..199
score: 5.8
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 68..154
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh13G003900Cucsa.180590Cucumber (Gy14) v1cgycmaB0513
CmaCh13G003900Cla009058Watermelon (97103) v1cmawmB197
CmaCh13G003900Csa1G181380Cucumber (Chinese Long) v2cmacuB223
CmaCh13G003900MELO3C025526Melon (DHL92) v3.5.1cmameB199
CmaCh13G003900ClCG01G010750Watermelon (Charleston Gray)cmawcgB182
CmaCh13G003900CSPI01G15650Wild cucumber (PI 183967)cmacpiB224
CmaCh13G003900CmoCh18G005830Cucurbita moschata (Rifu)cmacmoB222
CmaCh13G003900CmoCh13G004160Cucurbita moschata (Rifu)cmacmoB218
CmaCh13G003900Lsi02G011330Bottle gourd (USVL1VR-Ls)cmalsiB205
CmaCh13G003900Cp4.1LG09g06450Cucurbita pepo (Zucchini)cmacpeB212
CmaCh13G003900Cp4.1LG20g06530Cucurbita pepo (Zucchini)cmacpeB234
CmaCh13G003900CsaV3_1G015780Cucumber (Chinese Long) v3cmacucB0255
CmaCh13G003900CsaV3_UNG065500Cucumber (Chinese Long) v3cmacucB0268
CmaCh13G003900Cla97C01G010510Watermelon (97103) v2cmawmbB210
CmaCh13G003900Bhi08G000623Wax gourdcmawgoB0275
CmaCh13G003900CsGy1G015360Cucumber (Gy14) v2cgybcmaB080
CmaCh13G003900Carg25119Silver-seed gourdcarcmaB1435
CmaCh13G003900Carg25605Silver-seed gourdcarcmaB0059
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh13G003900CmaCh18G006080Cucurbita maxima (Rimu)cmacmaB212
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh13G003900Cucurbita pepo (Zucchini)cmacpeB218
CmaCh13G003900Bottle gourd (USVL1VR-Ls)cmalsiB207
CmaCh13G003900Cucumber (Gy14) v2cgybcmaB068
CmaCh13G003900Cucumber (Gy14) v2cgybcmaB724
CmaCh13G003900Melon (DHL92) v3.6.1cmamedB216
CmaCh13G003900Silver-seed gourdcarcmaB0559
CmaCh13G003900Cucumber (Chinese Long) v3cmacucB0241
CmaCh13G003900Watermelon (97103) v2cmawmbB213
CmaCh13G003900Wax gourdcmawgoB0260
CmaCh13G003900Wax gourdcmawgoB0276
CmaCh13G003900Cucurbita maxima (Rimu)cmacmaB216
CmaCh13G003900Cucurbita maxima (Rimu)cmacmaB233
CmaCh13G003900Cucurbita moschata (Rifu)cmacmoB223
CmaCh13G003900Wild cucumber (PI 183967)cmacpiB212
CmaCh13G003900Cucumber (Chinese Long) v2cmacuB210
CmaCh13G003900Watermelon (Charleston Gray)cmawcgB186
CmaCh13G003900Watermelon (97103) v1cmawmB205