CmoCh13G004160 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G004160
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPollen Ole e 1 allergen and extensin family protein, putative
LocationCmo_Chr13 : 5196264 .. 5197280 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATAAAGCAAGAAGATGATTACCAGAGTTTGTAGCTTCCATAATTCTGTCAGCCTGTTCTGGCTTCGTTCGTTCTTCTTCTTCCTCCTTTTCGGCCATGGATTTCCGATGGTAGTCGAATATGCAGAAGGTGAGACCCCGTTATCCGATCTTTTGGGTCGAGATGATTGGAGGCAGATAGCTGGATATGGTGAGGAGAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACATCAAGTTCATGCATGGCCTATTGAAGGTAACACAATAGCAGCTAATTTCTTAGTTCAAAAACACCAACTATGAAATCAAGCTTGGTTTTTACCTTTCTGATGAGTTTAAAATCAATCACTGCAGGTGCCATGGTGGGTGTGAATTGCAAGAACACTGGAAAAAACAGCAAATCTTATGAATGGGTTAATGGAGTTACCGATGAATTTGGGGACTTTGTTATTGATATTCCATCCCATCTTCATGCAACCTGCAGCTTCGAAAAGGCCTGTTCTATCAAGATTCTTCGGACACCGAAGAACACACGCTGTCGACCTGCTCATTTAGCTGGCAGTGAACAGCTGCAATTATCGTCGCTCGGAGGTGGCATAAGGACATATACTTCTGGCATCCTTAGGCTGCAGCACCAAACATCTCGACCTCTGCAAGCTTGTATAAGAGGGGAGGATTAACCATCAGACCACAAGCGAAGCCTCGTAAAGTGAAGTAATTGGTTACAGACCAGAATATATGGCTCATGTAGATGGCGCTGAGTCACAATGATGAGTTATTCGTTCATAGTTAGCACGATAAATCGAGCTTGCATAAATATGTATCGTTTGTGTATAAAAACATCTAGATTATGAAATACCGCAATCTATTTCATACCAAATACGACAGATGCTGCATCGAGTCTTCCACACAGTTGAACTTACTCACAAGGTGTAATTCTACCCTTAAAATTCTATTGGGAGCCAAAGAGATCATGTGTTCTT

mRNA sequence

TTGATAAAGCAAGAAGATGATTACCAGAGTTTGTAGCTTCCATAATTCTGTCAGCCTGTTCTGGCTTCGTTCGTTCTTCTTCTTCCTCCTTTTCGGCCATGGATTTCCGATGGTAGTCGAATATGCAGAAGGTGAGACCCCGTTATCCGATCTTTTGGGTCGAGATGATTGGAGGCAGATAGCTGGATATGGTGAGGAGAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACATCAAGTTCATGCATGGCCTATTGAAGGTGCCATGGTGGGTGTGAATTGCAAGAACACTGGAAAAAACAGCAAATCTTATGAATGGGTTAATGGAGTTACCGATGAATTTGGGGACTTTGTTATTGATATTCCATCCCATCTTCATGCAACCTGCAGCTTCGAAAAGGCCTGTTCTATCAAGATTCTTCGGACACCGAAGAACACACGCTGTCGACCTGCTCATTTAGCTGGCAGTGAACAGCTGCAATTATCGTCGCTCGGAGGTGGCATAAGGACATATACTTCTGGCATCCTTAGGCTGCAGCACCAAACATCTCGACCTCTGCAAGCTTGTATAAGAGGGGAGGATTAACCATCAGACCACAAGCGAAGCCTCGTAAAGTGAAGTAATTGGTTACAGACCAGAATATATGGCTCATGTAGATGGCGCTGAGTCACAATGATGAGTTATTCGTTCATAGTTAGCACGATAAATCGAGCTTGCATAAATATGTATCGTTTGTGTATAAAAACATCTAGATTATGAAATACCGCAATCTATTTCATACCAAATACGACAGATGCTGCATCGAGTCTTCCACACAGTTGAACTTACTCACAAGGTGTAATTCTACCCTTAAAATTCTATTGGGAGCCAAAGAGATCATGTGTTCTT

Coding sequence (CDS)

ATGATTACCAGAGTTTGTAGCTTCCATAATTCTGTCAGCCTGTTCTGGCTTCGTTCGTTCTTCTTCTTCCTCCTTTTCGGCCATGGATTTCCGATGGTAGTCGAATATGCAGAAGGTGAGACCCCGTTATCCGATCTTTTGGGTCGAGATGATTGGAGGCAGATAGCTGGATATGGTGAGGAGAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACATCAAGTTCATGCATGGCCTATTGAAGGTGCCATGGTGGGTGTGAATTGCAAGAACACTGGAAAAAACAGCAAATCTTATGAATGGGTTAATGGAGTTACCGATGAATTTGGGGACTTTGTTATTGATATTCCATCCCATCTTCATGCAACCTGCAGCTTCGAAAAGGCCTGTTCTATCAAGATTCTTCGGACACCGAAGAACACACGCTGTCGACCTGCTCATTTAGCTGGCAGTGAACAGCTGCAATTATCGTCGCTCGGAGGTGGCATAAGGACATATACTTCTGGCATCCTTAGGCTGCAGCACCAAACATCTCGACCTCTGCAAGCTTGTATAAGAGGGGAGGATTAA
Homology
[Close]
BLAST of CmoCh13G004160 vs. TrEMBL
Match: A0A0A0LT20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181380 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.1e-91
Identity = 162/194 (83.51%), Postives = 175/194 (90.21%), Query Frame = 1 

Query: 1   MITRVCSFHNSVSLFWLRSFFFFLLFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYGE 60
           M+ RV SFH+SV+LFWL  FFF+L+ GHGFPMV+E AE ETP+SDLL RD WR+IAGYGE
Sbjct: 1   MVNRVWSFHSSVNLFWLCIFFFYLI-GHGFPMVIESAEDETPVSDLLSRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120
           ERLSTVLVTGSVLCEACLHGDE QVHAWPI+GAMVGVNC NTGKNSKS +WV+GVTDEFG
Sbjct: 61  ERLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSLGGGIRTYTSGI 180
           DFVIDIPSHLHAT SFE  CSIKILRTPKNT CRPAHLAG + LQLSS GGGIRTYTSG+
Sbjct: 121 DFVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSRPLQAC 195
           LRLQHQTSRPLQAC
Sbjct: 181 LRLQHQTSRPLQAC 193

[Close]
BLAST of CmoCh13G004160 vs. TrEMBL
Match: B9HCD0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00740g PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-44
Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 1 

Query: 37  AEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVG 96
           A+ E PL +    ++  Q AGYGEE+LSTVLVTG+VLCEACLHG E+Q+HAWPI GA+V 
Sbjct: 34  AKAENPLQEFSSTEELVQWAGYGEEKLSTVLVTGTVLCEACLHG-ENQLHAWPISGALVN 93

Query: 97  VNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPA 156
           V C  + K SK       +TDE+GDF+ID+PSHLH     E+ CS+K+LR P+N+ CRPA
Sbjct: 94  VECHTSTKRSKKSS-AQAITDEYGDFLIDLPSHLHGIPHLERICSVKVLRLPQNSVCRPA 153

Query: 157 HLAGSEQLQLSSLGGGIRTYTSGILRLQHQTSRPLQAC 195
           H    + L+LSS+G GIR Y++G ++    TS+PLQAC
Sbjct: 154 HARKQKALKLSSVGNGIRNYSAGEIKFLQVTSKPLQAC 189

[Close]
BLAST of CmoCh13G004160 vs. TrEMBL
Match: V4TRN7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016770mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.4e-44
Identity = 85/150 (56.67%), Postives = 112/150 (74.67%), Query Frame = 1 

Query: 45  DLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGK 104
           +L  R++  Q+AGYGEE+LSTVLVTGSVLCEACLHG + Q+ AWPI GA+V V C N+ +
Sbjct: 41  ELSTREELVQMAGYGEEKLSTVLVTGSVLCEACLHGQDDQLRAWPITGALVSVYCHNSHR 100

Query: 105 NSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQL 164
             K        TDE+GDF+ID+PSHLHAT + +K CS+K+LR PKN+ CRPA++   + L
Sbjct: 101 --KKISKTQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPAYVKKHKGL 160

Query: 165 QLSSLGGGIRTYTSGILRLQHQTSRPLQAC 195
           +LSS+G GIRTY +G +   H TS+PL+AC
Sbjct: 161 KLSSVGNGIRTYAAGRIGFLHWTSKPLRAC 188

[Close]
BLAST of CmoCh13G004160 vs. TrEMBL
Match: B9IH16_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00790g PE=4 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-43
Identity = 82/158 (51.90%), Postives = 113/158 (71.52%), Query Frame = 1 

Query: 37  AEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVG 96
           A+ E PL +   R++  Q+AGYGEE+LSTVLVTG++LCEACL+G    +HAWP+ GA+V 
Sbjct: 33  AKAENPLQEFSNREELVQLAGYGEEKLSTVLVTGTILCEACLNGGTQLLHAWPVSGALVY 92

Query: 97  VNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPA 156
           V C    K SK+      +TDE+GDF+ID+PSHLH   + E+ CS+K+LR P+N+ CRPA
Sbjct: 93  VECHTGVKWSKTTS-SQAMTDEYGDFLIDLPSHLHGIPNLERTCSVKVLRLPQNSVCRPA 152

Query: 157 HLAGSEQLQLSSLGGGIRTYTSGILRLQHQTSRPLQAC 195
           H    + L+LSS+G GIR Y++G ++    TS+PLQAC
Sbjct: 153 HARKQKALELSSVGNGIRNYSAGEIKFLQVTSKPLQAC 189

[Close]
BLAST of CmoCh13G004160 vs. TrEMBL
Match: A0A067GTA8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029046mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.3e-43
Identity = 84/150 (56.00%), Postives = 111/150 (74.00%), Query Frame = 1 

Query: 45  DLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGK 104
           +L  R++  Q+AGYGEE+LSTVLVTG VLCEACLHG + Q+ AWPI GA+V V C N+ +
Sbjct: 41  ELSTREELVQMAGYGEEKLSTVLVTGFVLCEACLHGQDDQLRAWPITGALVSVYCHNSHR 100

Query: 105 NSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQL 164
             K        TDE+GDF+ID+PSHLHAT + +K CS+K+LR PKN+ CRPA++   + L
Sbjct: 101 --KIISKTQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPAYVKKHKGL 160

Query: 165 QLSSLGGGIRTYTSGILRLQHQTSRPLQAC 195
           +LSS+G GIRTY +G +   H TS+PL+AC
Sbjct: 161 KLSSVGNGIRTYAAGRIGFLHWTSKPLRAC 188

[Close]
BLAST of CmoCh13G004160 vs. TAIR10
Match: AT4G17215.1 (AT4G17215.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 67/165 (40.61%), Postives = 91/165 (55.15%), Query Frame = 1 

Query: 23  FLLFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDE 82
           FLL      ++V + E     SD   RD+  ++AGYGE++LS+VL+T S+L  +      
Sbjct: 3   FLLMSMTLVLIVTFGEA---FSDRWSRDEMVEMAGYGEQKLSSVLLTASLLSSS------ 62

Query: 83  HQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSI 142
               + PI GA +G  C +TG   +S +W+  VT+E G FVID+PSHLHA    +KAC I
Sbjct: 63  ----SSPIHGATIGFKC-HTGHRRRS-KWIKAVTNELGQFVIDLPSHLHAIPDLDKACII 122

Query: 143 KILRTPKNTRCRPAHLAGSEQLQLSSLGGGIRTYTSGILRLQHQT 188
           K L  PK  RC      G   +QL S   G R YT+G + LQ  T
Sbjct: 123 KTLSVPKPYRCSSKIHRG---IQLLSSSNGSRVYTAGNITLQEST 149

[Close]
BLAST of CmoCh13G004160 vs. TAIR10
Match: AT5G47635.1 (AT5G47635.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 1 

Query: 44  SDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTG 103
           ++L  R +  ++AGYGE++LS+V++TGS+LC+         +H+ PI GA V + C +TG
Sbjct: 24  NNLWTRTEMVEMAGYGEQKLSSVVITGSLLCDT----SRPHLHSIPIPGATVAIKC-HTG 83

Query: 104 KNSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQ 163
              +S +W+  VTDE G+F ID+PS LHA    E  C IK +  P+  RC        + 
Sbjct: 84  SKRRS-KWIKAVTDELGEFEIDLPSQLHAIPHLENTCFIKPVYVPRPYRCYNTSTNIHKP 143

Query: 164 LQLSSLGGGIRTYTSGILRLQHQTSR 190
           ++L S   G R YTSG +RLQ  +SR
Sbjct: 144 IKLVSSTNGFRVYTSGKIRLQGHSSR 163

[Close]
BLAST of CmoCh13G004160 vs. TAIR10
Match: AT2G40113.1 (AT2G40113.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 66/188 (35.11%), Postives = 98/188 (52.13%), Query Frame = 1 

Query: 13  SLFWLRSFFFFLLFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSV 72
           S F +R F     F +G      +A      S L    +   +AGYGE +LS+V++TGS+
Sbjct: 3   SFFIIRCFLLLFFFFNG-----AFAAS----SKLWSIREMSDMAGYGEHKLSSVVITGSL 62

Query: 73  LCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHA 132
           LC              P+ GA V + C +TG   +S +W+  VT++FG+FVI +PSHLHA
Sbjct: 63  LCNT------------PVSGATVAIKC-HTGLKQRS-KWIKSVTNDFGEFVIHLPSHLHA 122

Query: 133 TCSFEKACSIKILRTPKN-TRCRPAHLAGS--EQLQLSSLGGGIRTYTSGILRL----QH 192
               EKAC +K +  PK+  RC       +  + ++L S   G R YTSG ++L      
Sbjct: 123 IPQLEKACFVKPIHVPKHYHRCYHTFSKSNIHKDIKLVSSRNGFRVYTSGTIKLHGGHSS 167

Query: 193 QTSRPLQA 194
           +TS+P +A
Sbjct: 183 RTSQPHKA 167

[Close]
BLAST of CmoCh13G004160 vs. TAIR10
Match: AT5G15780.1 (AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 32/118 (27.12%), Postives = 58/118 (49.15%), Query Frame = 1 

Query: 64  STVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFV 123
           S+ +V G+V C+ C +G   +     I GA+V V C +  +NSK        TD+ G+F 
Sbjct: 38  SSAVVVGTVYCDTCFNGAFSKSPNHLISGALVAVECID--ENSKPSFRQEVKTDKRGEFK 97

Query: 124 IDIPSHLHATCSFEKACSIKILRT--PKNTRCRPAHLAGSEQLQLSSLGGGIRTYTSG 180
           + +P  +       K CS+K+L +  P  +    A  +  ++L+ +  G   R +++G
Sbjct: 98  VKLPFSVSKHVKKIKRCSVKLLSSSQPYCSIASSATSSSLKRLKSNHHGENTRVFSAG 153

[Close]
BLAST of CmoCh13G004160 vs. NCBI nr
Match: gi|449443524|ref|XP_004139527.1| (PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 3.0e-91
Identity = 162/194 (83.51%), Postives = 175/194 (90.21%), Query Frame = 1 

Query: 1   MITRVCSFHNSVSLFWLRSFFFFLLFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYGE 60
           M+ RV SFH+SV+LFWL  FFF+L+ GHGFPMV+E AE ETP+SDLL RD WR+IAGYGE
Sbjct: 1   MVNRVWSFHSSVNLFWLCIFFFYLI-GHGFPMVIESAEDETPVSDLLSRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120
           ERLSTVLVTGSVLCEACLHGDE QVHAWPI+GAMVGVNC NTGKNSKS +WV+GVTDEFG
Sbjct: 61  ERLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSLGGGIRTYTSGI 180
           DFVIDIPSHLHAT SFE  CSIKILRTPKNT CRPAHLAG + LQLSS GGGIRTYTSG+
Sbjct: 121 DFVIDIPSHLHATRSFENVCSIKILRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSRPLQAC 195
           LRLQHQTSRPLQAC
Sbjct: 181 LRLQHQTSRPLQAC 193

[Close]
BLAST of CmoCh13G004160 vs. NCBI nr
Match: gi|659127237|ref|XP_008463598.1| (PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 1.7e-89
Identity = 161/194 (82.99%), Postives = 172/194 (88.66%), Query Frame = 1 

Query: 1   MITRVCSFHNSVSLFWLRSFFFFLLFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYGE 60
           M+ RV SFH SV+LFWL  FFF+L+ GHGFPMV E AE ETP+SDLL RD WR+IAGYGE
Sbjct: 1   MMNRVWSFHCSVNLFWLCIFFFYLI-GHGFPMVTESAEDETPVSDLLNRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120
           ERLSTVLVTGSVLCE+CLHGDE QVHAWPI GAMVGVNC NTGKNSKS +WV+GVTDEFG
Sbjct: 61  ERLSTVLVTGSVLCESCLHGDEPQVHAWPIRGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSLGGGIRTYTSGI 180
           DFVIDIPS LHAT SFE  CSIKILRTPKNT CRPAHLAG +QLQLSS GGGIRTYTSG+
Sbjct: 121 DFVIDIPSRLHATQSFENVCSIKILRTPKNTHCRPAHLAGRKQLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSRPLQAC 195
           LRLQHQTSRPLQAC
Sbjct: 181 LRLQHQTSRPLQAC 193

[Close]
BLAST of CmoCh13G004160 vs. NCBI nr
Match: gi|224086338|ref|XP_002307854.1| (hypothetical protein POPTR_0006s00740g [Populus trichocarpa])

HSP 1 Score: 186.8 bits (473), Expect = 3.7e-44
Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 1 

Query: 37  AEGETPLSDLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVG 96
           A+ E PL +    ++  Q AGYGEE+LSTVLVTG+VLCEACLHG E+Q+HAWPI GA+V 
Sbjct: 34  AKAENPLQEFSSTEELVQWAGYGEEKLSTVLVTGTVLCEACLHG-ENQLHAWPISGALVN 93

Query: 97  VNCKNTGKNSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPA 156
           V C  + K SK       +TDE+GDF+ID+PSHLH     E+ CS+K+LR P+N+ CRPA
Sbjct: 94  VECHTSTKRSKKSS-AQAITDEYGDFLIDLPSHLHGIPHLERICSVKVLRLPQNSVCRPA 153

Query: 157 HLAGSEQLQLSSLGGGIRTYTSGILRLQHQTSRPLQAC 195
           H    + L+LSS+G GIR Y++G ++    TS+PLQAC
Sbjct: 154 HARKQKALKLSSVGNGIRNYSAGEIKFLQVTSKPLQAC 189

[Close]
BLAST of CmoCh13G004160 vs. NCBI nr
Match: gi|567915229|ref|XP_006449928.1| (hypothetical protein CICLE_v10016770mg [Citrus clementina])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 85/150 (56.67%), Postives = 112/150 (74.67%), Query Frame = 1 

Query: 45  DLLGRDDWRQIAGYGEERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGK 104
           +L  R++  Q+AGYGEE+LSTVLVTGSVLCEACLHG + Q+ AWPI GA+V V C N+ +
Sbjct: 41  ELSTREELVQMAGYGEEKLSTVLVTGSVLCEACLHGQDDQLRAWPITGALVSVYCHNSHR 100

Query: 105 NSKSYEWVNGVTDEFGDFVIDIPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQL 164
             K        TDE+GDF+ID+PSHLHAT + +K CS+K+LR PKN+ CRPA++   + L
Sbjct: 101 --KKISKTQTFTDEYGDFMIDLPSHLHATPNLDKTCSVKVLRLPKNSHCRPAYVKKHKGL 160

Query: 165 QLSSLGGGIRTYTSGILRLQHQTSRPLQAC 195
           +LSS+G GIRTY +G +   H TS+PL+AC
Sbjct: 161 KLSSVGNGIRTYAAGRIGFLHWTSKPLRAC 188

[Close]
BLAST of CmoCh13G004160 vs. NCBI nr
Match: gi|1009107478|ref|XP_015879943.1| (PREDICTED: uncharacterized protein LOC107416006 [Ziziphus jujuba])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 88/191 (46.07%), Postives = 127/191 (66.49%), Query Frame = 1 

Query: 6   CSFHNSVSLFWLRSFFFFLLFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYGEERLST 65
           C  +N V ++ L  FFF          + E+ E +  L +L  R+D  Q+AGYGEE+LST
Sbjct: 10  CGSNNLVMMYILFIFFFIR------SSMAEHDEDQ--LFELFSREDMVQVAGYGEEKLST 69

Query: 66  VLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFGDFVID 125
           VL++GSV CE CLH  + Q+HAWP+ G +VG+N     K SKS  WV  VTDEFGDF ID
Sbjct: 70  VLISGSVHCETCLH--DAQLHAWPMSGVLVGINFHKNSKRSKS-NWVRAVTDEFGDFTID 129

Query: 126 IPSHLHATCSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSLGGGIRTYTSGILRLQH 185
           +PS+LH+  + +K+C +K+LR PK + C+P H+   + L+LSS+  G+RTY +G +R QH
Sbjct: 130 LPSNLHSIPNLDKSCRVKVLRLPKKSMCQPTHVRRHKGLRLSSIQNGVRTYNAGRIRFQH 189

Query: 186 QTSRPLQACIR 197
            +S P++AC++
Sbjct: 190 SSSTPIEACVK 189

The following BLAST results are available for this feature:
BLAST of CmoCh13G004160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh13G004160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT20_CUCSA2.1e-9183.51Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181380 PE=4 SV=1[more]
B9HCD0_POPTR2.5e-4454.43Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00740g PE=4 SV=1[more]
V4TRN7_9ROSI7.4e-4456.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016770mg PE=4 SV=1[more]
B9IH16_POPTR3.7e-4351.90Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00790g PE=4 SV=2[more]
A0A067GTA8_CITSI6.3e-4356.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029046mg PE=4 SV=1[more]
BLAST of CmoCh13G004160 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17215.11.8e-2540.61 Pollen Ole e 1 allergen and extensin family protein[more]
AT5G47635.12.4e-2540.41 Pollen Ole e 1 allergen and extensin family protein[more]
AT2G40113.11.6e-2135.11 Pollen Ole e 1 allergen and extensin family protein[more]
AT5G15780.15.5e-0627.12 Pollen Ole e 1 allergen and extensin family protein[more]
BLAST of CmoCh13G004160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443524|ref|XP_004139527.1|3.0e-9183.51PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus][more]
gi|659127237|ref|XP_008463598.1|1.7e-8982.99PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo][more]
gi|224086338|ref|XP_002307854.1|3.7e-4454.43hypothetical protein POPTR_0006s00740g [Populus trichocarpa][more]
gi|567915229|ref|XP_006449928.1|1.1e-4356.67hypothetical protein CICLE_v10016770mg [Citrus clementina][more]
gi|1009107478|ref|XP_015879943.1|1.1e-4346.07PREDICTED: uncharacterized protein LOC107416006 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G004160.1CmoCh13G004160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33210FAMILY NOT NAMEDcoord: 28..199
score: 7.8
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 68..154
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh13G004160Cucsa.180590Cucumber (Gy14) v1cgycmoB0513
CmoCh13G004160CmaCh13G003900Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G004160CmaCh18G006080Cucurbita maxima (Rimu)cmacmoB396
CmoCh13G004160Cla009058Watermelon (97103) v1cmowmB184
CmoCh13G004160Csa1G181380Cucumber (Chinese Long) v2cmocuB209
CmoCh13G004160MELO3C025526Melon (DHL92) v3.5.1cmomeB186
CmoCh13G004160ClCG01G010750Watermelon (Charleston Gray)cmowcgB173
CmoCh13G004160CSPI01G15650Wild cucumber (PI 183967)cmocpiB211
CmoCh13G004160Lsi02G011330Bottle gourd (USVL1VR-Ls)cmolsiB195
CmoCh13G004160Cp4.1LG09g06450Cucurbita pepo (Zucchini)cmocpeB185
CmoCh13G004160Cp4.1LG20g06530Cucurbita pepo (Zucchini)cmocpeB201
CmoCh13G004160CsaV3_1G015780Cucumber (Chinese Long) v3cmocucB0241
CmoCh13G004160CsaV3_UNG065500Cucumber (Chinese Long) v3cmocucB0258
CmoCh13G004160Cla97C01G010510Watermelon (97103) v2cmowmbB194
CmoCh13G004160Bhi08G000623Wax gourdcmowgoB0264
CmoCh13G004160CsGy1G015360Cucumber (Gy14) v2cgybcmoB074
CmoCh13G004160Carg25119Silver-seed gourdcarcmoB1390
CmoCh13G004160Carg25605Silver-seed gourdcarcmoB0062
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh13G004160CmoCh18G005830Cucurbita moschata (Rifu)cmocmoB168
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G004160Cucurbita pepo (Zucchini)cmocpeB182
CmoCh13G004160Bottle gourd (USVL1VR-Ls)cmolsiB197
CmoCh13G004160Cucumber (Gy14) v2cgybcmoB065
CmoCh13G004160Melon (DHL92) v3.6.1cmomedB204
CmoCh13G004160Cucumber (Chinese Long) v3cmocucB0228
CmoCh13G004160Watermelon (97103) v2cmowmbB200
CmoCh13G004160Watermelon (97103) v2cmowmbB195
CmoCh13G004160Wax gourdcmowgoB0255
CmoCh13G004160Wax gourdcmowgoB0271
CmoCh13G004160Cucurbita moschata (Rifu)cmocmoB170
CmoCh13G004160Cucurbita maxima (Rimu)cmacmoB398
CmoCh13G004160Wild cucumber (PI 183967)cmocpiB200
CmoCh13G004160Cucumber (Chinese Long) v2cmocuB196
CmoCh13G004160Watermelon (Charleston Gray)cmowcgB177
CmoCh13G004160Watermelon (97103) v1cmowmB192