Carg25605 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25605
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pollen Ole e 1 allergen/extensin
Location	Cucurbita_argyrosperma_scaffold_223 : 148051 .. 149227 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCAAATTCACATAAAATAGAACCCATCTTTTTCATCTGGTAAAAGCCTACCCATAAGAGGGGAAGATGGTCAAAATCCAACACATAAAGTAATCGATGTCAAAACCCAGAAAGGGTATTTCGGTAACTTCGACATGTCGAGAAAATGGAAGATGTCTCATTCTAAATAGATTATATAACCCAAGGAATATGCATCTAATATATTGTCAGATTGATTTGTGTGATCATATTAGTTTCCTAAAGCCTAAAGAAAGAAGATGCTGACCAGAGTTTGCAGCTTCTACCATTGTTTCTTCTTCTTCTTCCTCCTTTTTGCCGATGGATTTCTGATGGTAGTCGAATCTGCGGAACATGAGACCCCGTTATCCGATCTGTTGAGTCGAGACGAATGGAGGCAGACAGCAGGATATGGCGAGGAGAGACTGTCCACGGTTTTGGTCACAGGCTCTCTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTGTAAAAGGTACTATAATTGCAGCTAGCCTTTAAGAAAAACTATGAGATCAAGCTTGGTTTTTACCTTTCTGATGAATATCAATCACTGCAGGTGCCATGGTGGGTGTGAGGTGCCACAACTCTGGAAAAAACAGCAAATCTTCTGATTGGGTACATGGAATCACAGATGAATTTGGAGACTTCATTATTGATATTCCATCCCGGTTTCATGCAACACAGAGCTTTGAAAAGGTCTGTTCCATCAAGATTCTTCGCACACCAAAGAACATACGCTGTCGACCTGCTCATTTTGCAGGTCGCAAACAGCTGCAATTATCGTCGTTTGGAGGAGGCATCCGCACGTATACTTCTGGTATCCTCAGGTTGCAGCACCAAACATCTCAACCCCTGCAAGCTTGTAAAAATAAGGGAATTGATGATCAACAGACCTTATGGTAGACCATAATATACGGCTCATGTAGATGGCGCTGAAGTCACAACGATGAGTTATTGGTTTGTAGTTAAAATGATAAATGGAGCTTGCAGAAATATGTATTGTTAGTGTATAAACACATATGTTTATGTAATACAGCAATTTACTTCATACCATATATGGCAGAAGTGTCGACTGCAACGAGTCCTCCTGTACAACGGCACAGAAAATAAGCTTATCAGCATTTTCATCTGGTATTTC

mRNA sequence

GGTCAAATTCACATAAAATAGAACCCATCTTTTTCATCTGGTAAAAGCCTACCCATAAGAGGGGAAGATGGTCAAAATCCAACACATAAAGTAATCGATGTCAAAACCCAGAAAGGGTATTTCGGTAACTTCGACATGTCGAGAAAATGGAAGATGTCTCATTCTAAATAGATTATATAACCCAAGGAATATGCATCTAATATATTGTCAGATTGATTTGTGTGATCATATTAGTTTCCTAAAGCCTAAAGAAAGAAGATGCTGACCAGAGTTTGCAGCTTCTACCATTGTTTCTTCTTCTTCTTCCTCCTTTTTGCCGATGGATTTCTGATGGTAGTCGAATCTGCGGAACATGAGACCCCGTTATCCGATCTGTTGAGTCGAGACGAATGGAGGCAGACAGCAGGATATGGCGAGGAGAGACTGTCCACGGTTTTGGTCACAGGCTCTCTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTGTAAAAGGTGCCATGGTGGGTGTGAGGTGCCACAACTCTGGAAAAAACAGCAAATCTTCTGATTGGGTACATGGAATCACAGATGAATTTGGAGACTTCATTATTGATATTCCATCCCGGTTTCATGCAACACAGAGCTTTGAAAAGGTCTGTTCCATCAAGATTCTTCGCACACCAAAGAACATACGCTGTCGACCTGCTCATTTTGCAGGTCGCAAACAGCTGCAATTATCGTCGTTTGGAGGAGGCATCCGCACGTATACTTCTGGTATCCTCAGGTTGCAGCACCAAACATCTCAACCCCTGCAAGCTTGTAAAAATAAGGGAATTGATGATCAACAGACCTTATGGTAGACCATAATATACGGCTCATGTAGATGGCGCTGAAGTCACAACGATGAGTTATTGGTTTGTAGTTAAAATGATAAATGGAGCTTGCAGAAATATGTATTGTTAGTGTATAAACACATATGTTTATGTAATACAGCAATTTACTTCATACCATATATGGCAGAAGTGTCGACTGCAACGAGTCCTCCTGTACAACGGCACAGAAAATAAGCTTATCAGCATTTTCATCTGGTATTTC

Coding sequence (CDS)

ATGCTGACCAGAGTTTGCAGCTTCTACCATTGTTTCTTCTTCTTCTTCCTCCTTTTTGCCGATGGATTTCTGATGGTAGTCGAATCTGCGGAACATGAGACCCCGTTATCCGATCTGTTGAGTCGAGACGAATGGAGGCAGACAGCAGGATATGGCGAGGAGAGACTGTCCACGGTTTTGGTCACAGGCTCTCTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTGTAAAAGGTGCCATGGTGGGTGTGAGGTGCCACAACTCTGGAAAAAACAGCAAATCTTCTGATTGGGTACATGGAATCACAGATGAATTTGGAGACTTCATTATTGATATTCCATCCCGGTTTCATGCAACACAGAGCTTTGAAAAGGTCTGTTCCATCAAGATTCTTCGCACACCAAAGAACATACGCTGTCGACCTGCTCATTTTGCAGGTCGCAAACAGCTGCAATTATCGTCGTTTGGAGGAGGCATCCGCACGTATACTTCTGGTATCCTCAGGTTGCAGCACCAAACATCTCAACCCCTGCAAGCTTGTAAAAATAAGGGAATTGATGATCAACAGACCTTATGGTAG

Protein sequence

MLTRVCSFYHCFFFFFLLFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQTLW

Homology

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BLAST of Carg25605 vs. NCBI nr
Match: XP_008463598.1 (PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 1.8e-87
Identity = 156/206 (75.73%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 1   MLTRVCSFYHC-------FXXXXXLFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYGE 60
           M+ RV SF HC             L   GF MV ESAE ETP+SDLL+RD WR+ AGYGE
Sbjct: 1   MMNRVWSF-HCSVNLFWLCIFFFYLIGHGFPMVTESAEDETPVSDLLNRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFG 120
           ERLSTVLVTGS+LCE+CLHGDEPQVHAWP++GAMVGV CHN+GKNSKSSDWVHG+TDEFG
Sbjct: 61  ERLSTVLVTGSVLCESCLHGDEPQVHAWPIRGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGI 180
           DF+IDIPSR HATQSFE VCSIKILRTPKN  CRPAH AGRKQLQLSSFGGGIRTYTSG+
Sbjct: 121 DFVIDIPSRLHATQSFENVCSIKILRTPKNTHCRPAHLAGRKQLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSQPLQACKNKGIDDQQTLW 200
           LRLQHQTS+PLQAC+N+G   +QT W
Sbjct: 181 LRLQHQTSRPLQACRNEGRSGRQTSW 205

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BLAST of Carg25605 vs. NCBI nr
Match: XP_004139527.1 (PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus] >KGN65025.1 hypothetical protein Csa_1G181380 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 149/182 (81.87%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 18  LFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQ 77
           L   GF MV+ESAE ETP+SDLLSRD WR+ AGYGEERLSTVLVTGS+LCEACLHGDEPQ
Sbjct: 24  LIGHGFPMVIESAEDETPVSDLLSRDHWREIAGYGEERLSTVLVTGSVLCEACLHGDEPQ 83

Query: 78  VHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKI 137
           VHAWP+KGAMVGV CHN+GKNSKSSDWVHG+TDEFGDF+IDIPS  HAT+SFE VCSIKI
Sbjct: 84  VHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFGDFVIDIPSHLHATRSFENVCSIKI 143

Query: 138 LRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQT 197
           LRTPKN  CRPAH AGRK LQLSSFGGGIRTYTSG+LRLQHQTS+PLQAC+N+G   +QT
Sbjct: 144 LRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGVLRLQHQTSRPLQACRNEGRGGRQT 203

Query: 198 LW 200
            W
Sbjct: 204 SW 205

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BLAST of Carg25605 vs. NCBI nr
Match: XP_022142515.1 (uncharacterized protein LOC111012615 [Momordica charantia])

HSP 1 Score: 325.5 bits (833), Expect = 1.3e-85
Identity = 156/207 (75.36%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 1   MLTRVCSF--------YHCFXXXXXLFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYG 60
           M+TR C F        +   XXXXX    GF +VVESAE +TP+SDLLSRD+WRQ AGYG
Sbjct: 1   MMTRFCRFHDSVKPFWFSXXXXXXXXXGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYG 60

Query: 61  EERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEF 120
           EERLSTVLVTGS+LCEACLHGDEPQ+H+WP+ GAMVGV CHN+G+NSKSSDW HG+TDEF
Sbjct: 61  EERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEF 120

Query: 121 GDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSG 180
           GDFIIDIPS  HAT+SFEKVCSIKIL+TPKN RCRPAHFAGR+QLQLSSFGGGIRTYTSG
Sbjct: 121 GDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSG 180

Query: 181 ILRLQHQTSQPLQACKNKGIDDQQTLW 200
            L+LQH+TS+PLQ C NKG  D+QTLW
Sbjct: 181 ALKLQHRTSRPLQGCINKGSGDKQTLW 207

[Close]

BLAST of Carg25605 vs. NCBI nr
Match: XP_023001613.1 (uncharacterized protein LOC111495689 [Cucurbita maxima])

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 148/194 (76.29%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MLTRVCSFYHC-------FXXXXXLFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYGE 60
           M+TRVCSF++        F     LF  GF MVVESAE ETPLSDLL RD+WRQ AGYGE
Sbjct: 1   MITRVCSFHNSVSLFSLHFFFFFLLFGHGFPMVVESAEGETPLSDLLGRDDWRQIAGYGE 60

Query: 61  ERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFG 120
           ERLSTVLVTGS+LCEACLHGDE QVHAWP++GAMVGV C N+GKNSKS +WV+G+TDEFG
Sbjct: 61  ERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEFG 120

Query: 121 DFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGI 180
           DF+IDIPS  HA +SFEK CSIKILRTPKN RCRPAH AG +QLQLSSFGGG RTYTSGI
Sbjct: 121 DFVIDIPSHLHAIRSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGTRTYTSGI 180

Query: 181 LRLQHQTSQPLQAC 188
           LRLQHQTS+PLQAC
Sbjct: 181 LRLQHQTSRPLQAC 194

[Close]

BLAST of Carg25605 vs. NCBI nr
Match: XP_023520170.1 (uncharacterized protein LOC111783471 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80
Identity = 152/195 (77.95%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 1   MLTRVCSFYHC--------FXXXXXLFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYG 60
           M+TRVCSF++          XXXXX F  GF MVVE AE ETPLSDLL RD+WRQ AGYG
Sbjct: 1   MITRVCSFHNSVSLFSIRFXXXXXXXFGHGFPMVVEYAEGETPLSDLLGRDDWRQIAGYG 60

Query: 61  EERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEF 120
           EERLSTVLVTGS+LCEACLHGDE QVHAWP++GAMVGV C N+GKNSKS +WV+G+TDEF
Sbjct: 61  EERLSTVLVTGSVLCEACLHGDEHQVHAWPIEGAMVGVNCKNTGKNSKSYEWVNGVTDEF 120

Query: 121 GDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSG 180
           GDF+IDIPS  HAT SFEK CSIKILRTPKN RCRPAH AG +QLQLSSFGGGIRTYTSG
Sbjct: 121 GDFVIDIPSHLHATSSFEKACSIKILRTPKNTRCRPAHLAGSEQLQLSSFGGGIRTYTSG 180

Query: 181 ILRLQHQTSQPLQAC 188
           ILRLQHQTS+PLQAC
Sbjct: 181 ILRLQHQTSRPLQAC 195

[Close]

BLAST of Carg25605 vs. TAIR10
Match: AT5G47635.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-28
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 37  SDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSG 96
           ++L +R E  + AGYGE++LS+V++TGSLLC+       P +H+ P+ GA V ++CH   
Sbjct: 24  NNLWTRTEMVEMAGYGEQKLSSVVITGSLLCDT----SRPHLHSIPIPGATVAIKCHTGS 83

Query: 97  KNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQ 156
           K  + S W+  +TDE G+F ID+PS+ HA    E  C IK +  P+  RC        K 
Sbjct: 84  K--RRSKWIKAVTDELGEFEIDLPSQLHAIPHLENTCFIKPVYVPRPYRCYNTSTNIHKP 143

Query: 157 LQLSSFGGGIRTYTSGILRLQHQTSQ 183
           ++L S   G R YTSG +RLQ  +S+
Sbjct: 144 IKLVSSTNGFRVYTSGKIRLQGHSSR 163

[Close]

BLAST of Carg25605 vs. TAIR10
Match: AT4G17215.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 58/144 (40.28%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 37  SDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSG 96
           SD  SRDE  + AGYGE++LS+VL+T SLL  +          + P+ GA +G +CH   
Sbjct: 21  SDRWSRDEMVEMAGYGEQKLSSVLLTASLLSSS----------SSPIHGATIGFKCHTG- 80

Query: 97  KNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQ 156
            + + S W+  +T+E G F+ID+PS  HA    +K C IK L  PK  RC      G   
Sbjct: 81  -HRRRSKWIKAVTNELGQFVIDLPSHLHAIPDLDKACIIKTLSVPKPYRCSSKIHRG--- 140

Query: 157 LQLSSFGGGIRTYTSGILRLQHQT 181
           +QL S   G R YT+G + LQ  T
Sbjct: 141 IQLLSSSNGSRVYTAGNITLQEST 149

[Close]

BLAST of Carg25605 vs. TAIR10
Match: AT2G40113.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23
Identity = 60/157 (38.22%), Postives = 83/157 (52.87%), Query Frame = 0


Query: 37  SDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSG 96
           S L S  E    AGYGE +LS+V++TGSLLC              PV GA V ++CH   
Sbjct: 25  SKLWSIREMSDMAGYGEHKLSSVVITGSLLCNT------------PVSGATVAIKCHTGL 84

Query: 97  KNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNI-RCRPAHFAG-- 156
           K  + S W+  +T++FG+F+I +PS  HA    EK C +K +  PK+  RC         
Sbjct: 85  K--QRSKWIKSVTNDFGEFVIHLPSHLHAIPQLEKACFVKPIHVPKHYHRCYHTFSKSNI 144

Query: 157 RKQLQLSSFGGGIRTYTSGILRL----QHQTSQPLQA 187
            K ++L S   G R YTSG ++L      +TSQP +A
Sbjct: 145 HKDIKLVSSRNGFRVYTSGTIKLHGGHSSRTSQPHKA 167

[Close]

BLAST of Carg25605 vs. TrEMBL
Match: tr|A0A1S3CJM3|A0A1S3CJM3_CUCME (uncharacterized protein LOC103501709 OS=Cucumis melo OX=3656 GN=LOC103501709 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-87
Identity = 156/206 (75.73%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 1   MLTRVCSFYHC-------FXXXXXLFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYGE 60
           M+ RV SF HC             L   GF MV ESAE ETP+SDLL+RD WR+ AGYGE
Sbjct: 1   MMNRVWSF-HCSVNLFWLCIFFFYLIGHGFPMVTESAEDETPVSDLLNRDHWREIAGYGE 60

Query: 61  ERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFG 120
           ERLSTVLVTGS+LCE+CLHGDEPQVHAWP++GAMVGV CHN+GKNSKSSDWVHG+TDEFG
Sbjct: 61  ERLSTVLVTGSVLCESCLHGDEPQVHAWPIRGAMVGVNCHNTGKNSKSSDWVHGVTDEFG 120

Query: 121 DFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGI 180
           DF+IDIPSR HATQSFE VCSIKILRTPKN  CRPAH AGRKQLQLSSFGGGIRTYTSG+
Sbjct: 121 DFVIDIPSRLHATQSFENVCSIKILRTPKNTHCRPAHLAGRKQLQLSSFGGGIRTYTSGV 180

Query: 181 LRLQHQTSQPLQACKNKGIDDQQTLW 200
           LRLQHQTS+PLQAC+N+G   +QT W
Sbjct: 181 LRLQHQTSRPLQACRNEGRSGRQTSW 205

[Close]

BLAST of Carg25605 vs. TrEMBL
Match: tr|A0A0A0LT20|A0A0A0LT20_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181380 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 7.7e-87
Identity = 149/182 (81.87%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 18  LFADGFLMVVESAEHETPLSDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQ 77
           L   GF MV+ESAE ETP+SDLLSRD WR+ AGYGEERLSTVLVTGS+LCEACLHGDEPQ
Sbjct: 24  LIGHGFPMVIESAEDETPVSDLLSRDHWREIAGYGEERLSTVLVTGSVLCEACLHGDEPQ 83

Query: 78  VHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKI 137
           VHAWP+KGAMVGV CHN+GKNSKSSDWVHG+TDEFGDF+IDIPS  HAT+SFE VCSIKI
Sbjct: 84  VHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFGDFVIDIPSHLHATRSFENVCSIKI 143

Query: 138 LRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQT 197
           LRTPKN  CRPAH AGRK LQLSSFGGGIRTYTSG+LRLQHQTS+PLQAC+N+G   +QT
Sbjct: 144 LRTPKNTHCRPAHLAGRKPLQLSSFGGGIRTYTSGVLRLQHQTSRPLQACRNEGRGGRQT 203

Query: 198 LW 200
            W
Sbjct: 204 SW 205

[Close]

BLAST of Carg25605 vs. TrEMBL
Match: tr|A0A2N9GHJ5|A0A2N9GHJ5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29858 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.0e-52
Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 0


Query: 9   YHCFXXXXXLFADGFLMVVES----AEHETPLSDLLSRDEWRQTAGYGEERLSTVLVTGS 68
           Y C      +F   F M+  +    A  E PL +L +++++ Q AGYGEE+LSTVLVTGS
Sbjct: 3   YFCGFHNLVMFITVFFMIFSTATSMATEEDPLFELSNQEDFVQMAGYGEEKLSTVLVTGS 62

Query: 69  LLCEACLHGDEPQVHAWPVKGAMVGVRCHNSGKNSKSSDWVHGITDEFGDFIIDIPSRFH 128
           + CEACLHG E ++HAWP+ GA+V V CHN+GKNS+S  W   +TDEFG+FI+D+PS  H
Sbjct: 63  VHCEACLHGHEAELHAWPISGALVTVNCHNNGKNSRSR-WAEAVTDEFGEFIVDLPSHLH 122

Query: 129 ATQSFEKVCSIKILRTPKNIRCRPAHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPL 188
           A  + E+ CS+K+LR PKN  CRPA+   +K L+LSSFG GIRTY++G +R    TS PL
Sbjct: 123 AVPNLEQTCSVKVLRIPKNSPCRPAYVKKQKGLKLSSFGNGIRTYSAGKIRFMDLTSGPL 182

Query: 189 QACKNKGID 194
           QAC  K  D
Sbjct: 183 QACMKKSGD 190

[Close]

BLAST of Carg25605 vs. TrEMBL
Match: tr|B9HCD0|B9HCD0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G005600v3 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 93/171 (54.39%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 29  SAEHETPLSDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMV 88
           +A+ E PL +  S +E  Q AGYGEE+LSTVLVTG++LCEACLHG E Q+HAWP+ GA+V
Sbjct: 33  TAKAENPLQEFSSTEELVQWAGYGEEKLSTVLVTGTVLCEACLHG-ENQLHAWPISGALV 92

Query: 89  GVRCHNSGKNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRP 148
            V CH S K SK S     ITDE+GDF+ID+PS  H     E++CS+K+LR P+N  CRP
Sbjct: 93  NVECHTSTKRSKKSS-AQAITDEYGDFLIDLPSHLHGIPHLERICSVKVLRLPQNSVCRP 152

Query: 149 AHFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQTLW 200
           AH   +K L+LSS G GIR Y++G ++    TS+PLQAC  +G  D+Q  W
Sbjct: 153 AHARKQKALKLSSVGNGIRNYSAGEIKFLQVTSKPLQACNERGSSDKQIAW 201

[Close]

BLAST of Carg25605 vs. TrEMBL
Match: tr|A0A2I4HP65|A0A2I4HP65_9ROSI (uncharacterized protein LOC109020018 OS=Juglans regia OX=51240 GN=LOC109020018 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.4e-48
Identity = 96/170 (56.47%), Postives = 119/170 (70.00%), Query Frame = 0


Query: 30  AEHETPLSDLLSRDEWRQTAGYGEERLSTVLVTGSLLCEACLHGDEPQVHAWPVKGAMVG 89
           A  E PL +L SR+E  Q AGYGEERLSTVLVTGS+LCEACLHGD P + AWP+ GAMV 
Sbjct: 27  ATRENPLFELSSREELVQIAGYGEERLSTVLVTGSILCEACLHGD-PHIRAWPISGAMVA 86

Query: 90  VRCHNSGKNSKSSDWVHGITDEFGDFIIDIPSRFHATQSFEKVCSIKILRTPKNIRCRPA 149
           V CHN G+  +S     G+TDEFGDFIID+PS  H+  + EK CS+K+LR PKN  CRP 
Sbjct: 87  VNCHNHGRKCRSG-LAQGVTDEFGDFIIDLPSHLHSIPNLEKTCSVKVLRIPKNSPCRPT 146

Query: 150 HFAGRKQLQLSSFGGGIRTYTSGILRLQHQTSQPLQACKNKGIDDQQTLW 200
               +K + LSS G  IR+Y++G +R  + TS+PLQAC  KG   ++ LW
Sbjct: 147 SLRKQKGIILSSVGNSIRSYSAGSIRFLNLTSRPLQACV-KGSGHKEMLW 193

The following BLAST results are available for this feature:

BLAST of Carg25605 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463598.1	1.8e-87	75.73	PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo]	[more]
XP_004139527.1	1.2e-86	81.87	PREDICTED: uncharacterized protein LOC101215830 [Cucumis sativus] >KGN65025.1 hy...	[more]
XP_022142515.1	1.3e-85	75.36	uncharacterized protein LOC111012615 [Momordica charantia]	[more]
XP_023001613.1	1.5e-81	76.29	uncharacterized protein LOC111495689 [Cucurbita maxima]	[more]
XP_023520170.1	1.6e-80	77.95	uncharacterized protein LOC111783471 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25605 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47635.1	3.9e-28	40.41	Pollen Ole e 1 allergen and extensin family protein	[more]
AT4G17215.1	2.0e-24	40.28	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G40113.1	8.4e-23	38.22	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of Carg25605 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25605 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJM3\|A0A1S3CJM3_CUCME	1.2e-87	75.73	uncharacterized protein LOC103501709 OS=Cucumis melo OX=3656 GN=LOC103501709 PE=...	[more]
tr\|A0A0A0LT20\|A0A0A0LT20_CUCSA	7.7e-87	81.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181380 PE=4 SV=1	[more]
tr\|A0A2N9GHJ5\|A0A2N9GHJ5_FAGSY	8.0e-52	52.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29858 PE=4 SV=1	[more]
tr\|B9HCD0\|B9HCD0_POPTR	1.8e-48	54.39	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G005600v3 PE=...	[more]
tr\|A0A2I4HP65\|A0A2I4HP65_9ROSI	5.4e-48	56.47	uncharacterized protein LOC109020018 OS=Juglans regia OX=51240 GN=LOC109020018 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25605-RA	Carg25605-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 61..143 e-value: 1.9E-10 score: 40.9
None	No IPR available	PANTHER	PTHR33210:SF8	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 23..190
None	No IPR available	PANTHER	PTHR33210	FAMILY NOT NAMED	coord: 23..190

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25605	Cla009058	Watermelon (97103) v1	carwmB0052
Carg25605	Csa1G181380	Cucumber (Chinese Long) v2	carcuB0051
Carg25605	MELO3C025526	Melon (DHL92) v3.5.1	carmeB0049
Carg25605	ClCG01G010750	Watermelon (Charleston Gray)	carwcgB0053
Carg25605	CSPI01G15650	Wild cucumber (PI 183967)	carcpiB0055
Carg25605	Cucsa.180590	Cucumber (Gy14) v1	carcgyB0058
Carg25605	CmaCh13G003900	Cucurbita maxima (Rimu)	carcmaB0059
Carg25605	CmoCh13G004160	Cucurbita moschata (Rifu)	carcmoB0062
Carg25605	CmoCh18G005830	Cucurbita moschata (Rifu)	carcmoB0063
Carg25605	Lsi02G011330	Bottle gourd (USVL1VR-Ls)	carlsiB046
Carg25605	Cp4.1LG09g06450	Cucurbita pepo (Zucchini)	carcpeB0065
Carg25605	Cp4.1LG20g06530	Cucurbita pepo (Zucchini)	carcpeB0066
Carg25605	CsGy1G015360	Cucumber (Gy14) v2	carcgybB0051
Carg25605	MELO3C025526.2	Melon (DHL92) v3.6.1	carmedB0051
Carg25605	CsaV3_1G015780	Cucumber (Chinese Long) v3	carcucB0056
Carg25605	CsaV3_UNG065500	Cucumber (Chinese Long) v3	carcucB0057
Carg25605	Cla97C01G010510	Watermelon (97103) v2	carwmbB0050
Carg25605	Bhi08G000623	Wax gourd	carwgoB0057

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25605	Carg25119	Silver-seed gourd	carcarB055

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25605	Cucurbita maxima (Rimu)	carcmaB0060