Csa7G430160 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G430160
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 16741742 .. 16742196 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCCATTTTGTGAAGCAAATGGGGAGTGAGAGCATATCTCATAAACAACATTATGATATCTCCATGTCAAAGAGAACTAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAGATTCTCCCAACAAACGATGACGATCTTATTATCATTGGTAAAGGAGATCAATCCGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAGTGGCGAAGGGAAGGCAGAAATAAGGTCGGACGAGGGCAACCGAGAAAGGAACTCGCTTGGCCAACACTTTAGTAAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTAGTTGGGAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCATCATCAACACCAGCTGATGAAGAAACCAATTAGAAAAAAGTCTTTTCTGTAA

mRNA sequence

ATGGGGAGTGAGAGCATATCTCATAAACAACATTATGATATCTCCATGTCAAAGAGAACTAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAGATTCTCCCAACAAACGATGACGATCTTATTATCATTGGTAAAGGAGATCAATCCGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAGTGGCGAAGGGAAGGCAGAAATAAGGTCGGACGAGGGCAACCGAGAAAGGAACTCGCTTGGCCAACACTTTAGTAAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTAGTTGGGAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCATCATCAACACCAGCTGATGAAGAAACCAATTAGAAAAAAGTCTTTTCTGTAA

Coding sequence (CDS)

ATGGGGAGTGAGAGCATATCTCATAAACAACATTATGATATCTCCATGTCAAAGAGAACTAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAGATTCTCCCAACAAACGATGACGATCTTATTATCATTGGTAAAGGAGATCAATCCGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAGTGGCGAAGGGAAGGCAGAAATAAGGTCGGACGAGGGCAACCGAGAAAGGAACTCGCTTGGCCAACACTTTAGTAAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTAGTTGGGAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCATCATCAACACCAGCTGATGAAGAAACCAATTAGAAAAAAGTCTTTTCTGTAA

Protein sequence

MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQLISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGGDHHQHQLMKKPIRKKSFL*

Homology

[Close]

BLAST of Csa7G430160 vs. TrEMBL
Match: A0A0A0KBK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430160 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60

Query: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120
           LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN
Sbjct: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120

Query: 121 LIKGGGDHHQHQLMKKPIRKKSFL 145
           LIKGGGDHHQHQLMKKPIRKKSFL
Sbjct: 121 LIKGGGDHHQHQLMKKPIRKKSFL 144

[Close]

BLAST of Csa7G430160 vs. TrEMBL
Match: A0A067JCA4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05256 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.3e-17
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSE    K  YDI+MSKRTRKP K            +D ++      ++++ D KSLKQ
Sbjct: 1   MGSECNPSKHRYDITMSKRTRKPLKSNMPQAHADLRGEDNLL------AKVDEDRKSLKQ 60

Query: 61  LISG--EGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKF- 120
           LI+G      E + D  NR RNSLGQHFS+EE   LQ++++Q+Q GLQ VKLK ++G++ 
Sbjct: 61  LINGIANNVEETKEDSENRGRNSLGQHFSEEE-KQLQLMRRQNQQGLQAVKLKGIMGRYV 120

Query: 121 --LRNLIKGGGDHHQHQL--MKKPI 139
             L +LIK   D  +  +   KKP+
Sbjct: 121 KVLSHLIKVKRDSTRTNIRPRKKPV 138

[Close]

BLAST of Csa7G430160 vs. TrEMBL
Match: A2Q3C1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g062280 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-17
Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 7   SHKQHYDISMSKRTRKPAKIQDELQI--LPTNDD---DLIIIGKGDQSEINNDHKSLKQL 66
           S K+HYDI+MS+RTRK   + +E  I  + T  D   +  I    + +E N DHKSLKQL
Sbjct: 6   SAKRHYDITMSRRTRKQQSLANEKPISKVETPKDVSLETTIPEVKEGNENNIDHKSLKQL 65

Query: 67  ISGEGKAEIR----SDEG-NRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVV-- 126
           I GE K   +    SDEG ++ RNSLG+HF++EE   LQ+V+ Q +D LQG+K KK+V  
Sbjct: 66  IVGEEKESTKKCSSSDEGESKGRNSLGEHFTEEE-KQLQLVRMQQKDNLQGLKFKKLVRR 125

Query: 127 -GKFLRNLIKGGGDHHQHQLMKKPIRKKS 143
             K L +++K   D H     KKP+ K S
Sbjct: 126 YAKVLGHMMKSKRDPHLGDAGKKPVFKLS 153

[Close]

BLAST of Csa7G430160 vs. TrEMBL
Match: V7BT09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G042700g PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15
Identity = 66/160 (41.25%), Postives = 90/160 (56.25%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPA-------KIQDELQILPTNDDDLII----IGKGDQS 60
           M  +S S K+ YDI+MS+RTRK         K +  +      DD L +    IG+  Q 
Sbjct: 1   MEVQSPSVKRPYDITMSRRTRKHQFPVQGNEKSKSAMGDAAPKDDKLKVQATTIGEVKQG 60

Query: 61  EINNDHKSLKQLISGEGKAEI---RSDE-GNRERNSLGQHFSKEEINNLQIVKKQHQDGL 120
              NDHKSLKQLI G+   E     SDE G   RNSLG+HF++EE  +LQ+V+ Q ++ L
Sbjct: 61  G-ENDHKSLKQLIIGDDDKEAMKGNSDERGKGSRNSLGEHFTEEEKQHLQLVRMQQKENL 120

Query: 121 QGVKLKKVVGKF---LRNLIKGGGDHHQHQLMKKPIRKKS 143
           QG+K KK+V ++   L +L+K   D H     KKP+ K S
Sbjct: 121 QGLKFKKLVSRYAKVLGHLLKAKRDPHLGDAGKKPVFKLS 159

[Close]

BLAST of Csa7G430160 vs. TrEMBL
Match: A0A0S3SJP2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G197300 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-15
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPA-KIQDELQILPTNDDDLIIIGKGDQSEI-------- 60
           M  +S S K+ YDI+MS+RTRK    +Q   +      D+ + +     + I        
Sbjct: 1   MEVQSPSVKRPYDITMSRRTRKQQFSVQGNEKPKSAMGDEKLSVETAQTNGIIAEVKHGG 60

Query: 61  NNDHKSLKQLISG---EGKAEIRSDEGNR-ERNSLGQHFSKEEINNLQIVKKQHQDGLQG 120
            +DHKSLKQLI G   E K    SDEG +  RNSLG+HF++EE  +LQ+V+ Q +D LQG
Sbjct: 61  ESDHKSLKQLIIGDDNETKGNNNSDEGGKGSRNSLGEHFTEEEKQHLQLVRMQQKDNLQG 120

Query: 121 VKLKKVVGKF---LRNLIKGGGDHHQHQLMKKPIRKKS 143
           +K KK+V ++   L +L+K   D H     KKP  K S
Sbjct: 121 LKFKKLVSRYAKVLGHLLKAKRDPHLGDAGKKPFFKLS 158

[Close]

BLAST of Csa7G430160 vs. TAIR10
Match: AT2G31930.1 (AT2G31930.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 4.7e-07
Identity = 49/145 (33.79%), Postives = 69/145 (47.59%), Query Frame = 1


Query: 1   MGSESISH-KQHYDISMSKRTRKP-----------AKIQDELQILPTNDDDLIIIGKGDQ 60
           MGSE ++  K  +D+SMSKRTRKP           A      Q  P  + + I     + 
Sbjct: 1   MGSEVVNPTKPRFDLSMSKRTRKPWSSLINDMHHHAICTQSSQPKPDKEQEQI-----ED 60

Query: 61  SEINNDHKSLKQLISGEGKAEIRSDEGNRERNSLGQHFSKEE--INNLQIVKKQHQDGLQ 120
            EI  D KSL  L+  + K    +D  N  ++SL QHF   E     +Q+V K+ + G  
Sbjct: 61  KEI--DRKSLNNLMRCDEKLNGEADVNN--KSSLDQHFEDGEGIKPTMQLVVKKEKQG-- 120

Query: 121 GVKLKKVVGKFLR---NLIKGGGDH 129
           G+K K +VG++++    LIK   DH
Sbjct: 121 GLKFKGMVGRYVKVWSGLIKAKRDH 134

[Close]

BLAST of Csa7G430160 vs. NCBI nr
Match: gi|778728804|ref|XP_011659480.1| (PREDICTED: uncharacterized protein LOC105436185 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 2.2e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60

Query: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120
           LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN
Sbjct: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120

Query: 121 LIKGGGDHHQHQLMKKPIRKKSFL 145
           LIKGGGDHHQHQLMKKPIRKKSFL
Sbjct: 121 LIKGGGDHHQHQLMKKPIRKKSFL 144

[Close]

BLAST of Csa7G430160 vs. NCBI nr
Match: gi|659122589|ref|XP_008461224.1| (PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.3e-64
Identity = 130/144 (90.28%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSESISHKQHYDISMSKRTRKPAKIQDELQ   + DD L II KGD+SE NNDHKSLKQ
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQ 60

Query: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120
           LISGEGKAE R DEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN
Sbjct: 61  LISGEGKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120

Query: 121 LIKGGGDHHQHQLMKKPIRKKSFL 145
           LIKGGGD HQHQLMKKP RKKSFL
Sbjct: 121 LIKGGGD-HQHQLMKKPTRKKSFL 143

[Close]

BLAST of Csa7G430160 vs. NCBI nr
Match: gi|1009105988|ref|XP_015901462.1| (PREDICTED: uncharacterized protein LOC107434481 [Ziziphus jujuba])

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-18
Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 1


Query: 1   MGSE-SISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGD---QSEIN---N 60
           MGSE +I  K HYDISMSKRTRKP   +D  +     + DL    +G    +S ++   N
Sbjct: 1   MGSECNIPQKLHYDISMSKRTRKPLNTRDANRKYSPPEGDLNGGEEGGGRRESSLDGEEN 60

Query: 61  DHKSLKQLISGEGKAEI---------RSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDG 120
            HKSLKQLI+G+GKA +         R +E ++ R+SLGQHF++EE  NLQ++  Q ++G
Sbjct: 61  GHKSLKQLINGDGKAVVVIKSGGGDDRHEEISKGRSSLGQHFTEEE-KNLQLITTQQKEG 120

Query: 121 LQGVKLKKVVGKF---LRNLIKGGGDHHQHQLMKKPI 139
           LQG KLKK+V ++   L +LIK   D    +  KKP+
Sbjct: 121 LQGRKLKKMVSRYAKVLSHLIKLKRDSSLKESQKKPV 156

[Close]

BLAST of Csa7G430160 vs. NCBI nr
Match: gi|645250852|ref|XP_008231406.1| (PREDICTED: uncharacterized protein LOC103330586 [Prunus mume])

HSP 1 Score: 96.3 bits (238), Expect = 4.7e-17
Identity = 65/134 (48.51%), Postives = 86/134 (64.18%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSE   +K+ YDISMSKRTRK    +D+     +  +D      GDQ   N++ KS KQ
Sbjct: 1   MGSECSINKRCYDISMSKRTRKSFHHRDQSCPSKSRVED------GDQD--NDNRKSFKQ 60

Query: 61  LISGEGKAEI---RSDEGNRERNSLGQHFSKEEINNLQIVKKQHQD-GLQGVKLKKVV-- 120
           LI G+ KA++     D+G+R R+SLGQHF+ EE N+LQ+VKKQ +  GLQGVKLKK+V  
Sbjct: 61  LIDGDEKAKLIIKSGDQGSRARSSLGQHFTDEE-NHLQLVKKQQKTAGLQGVKLKKLVSR 120

Query: 121 -GKFLRNLIKGGGD 128
             K  R+L+K   D
Sbjct: 121 CAKVFRHLVKAESD 125

[Close]

BLAST of Csa7G430160 vs. NCBI nr
Match: gi|802795909|ref|XP_012092626.1| (PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas])

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-17
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSE    K  YDI+MSKRTRKP K            +D ++      ++++ D KSLKQ
Sbjct: 1   MGSECNPSKHRYDITMSKRTRKPLKSNMPQAHADLRGEDNLL------AKVDEDRKSLKQ 60

Query: 61  LISG--EGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKF- 120
           LI+G      E + D  NR RNSLGQHFS+EE   LQ++++Q+Q GLQ VKLK ++G++ 
Sbjct: 61  LINGIANNVEETKEDSENRGRNSLGQHFSEEE-KQLQLMRRQNQQGLQAVKLKGIMGRYV 120

Query: 121 --LRNLIKGGGDHHQHQL--MKKPI 139
             L +LIK   D  +  +   KKP+
Sbjct: 121 KVLSHLIKVKRDSTRTNIRPRKKPV 138

The following BLAST results are available for this feature:

BLAST of Csa7G430160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBK8_CUCSA	1.6e-75	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430160 PE=4 SV=1	[more]
A0A067JCA4_JATCU	4.3e-17	42.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05256 PE=4 SV=1	[more]
A2Q3C1_MEDTR	7.3e-17	44.30	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g062280 PE=4 SV=1	[more]
V7BT09_PHAVU	1.8e-15	41.25	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G042700g PE=4 SV=1	[more]
A0A0S3SJP2_PHAAN	2.4e-15	39.87	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G197300 PE=...	[more]

BLAST of Csa7G430160 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31930.1	4.7e-07	33.79	unknown protein	[more]

BLAST of Csa7G430160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728804\|ref\|XP_011659480.1\|	2.2e-75	100.00	PREDICTED: uncharacterized protein LOC105436185 [Cucumis sativus]	[more]
gi\|659122589\|ref\|XP_008461224.1\|	2.3e-64	90.28	PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo]	[more]
gi\|1009105988\|ref\|XP_015901462.1\|	2.5e-18	43.95	PREDICTED: uncharacterized protein LOC107434481 [Ziziphus jujuba]	[more]
gi\|645250852\|ref\|XP_008231406.1\|	4.7e-17	48.51	PREDICTED: uncharacterized protein LOC103330586 [Prunus mume]	[more]
gi\|802795909\|ref\|XP_012092626.1\|	6.2e-17	42.76	PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G430160.1	Csa7G430160.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G430160	Cla015289	Watermelon (97103) v1	cuwmB566
Csa7G430160	MELO3C023500	Melon (DHL92) v3.5.1	cumeB521
Csa7G430160	ClCG09G003640	Watermelon (Charleston Gray)	cuwcgB524
Csa7G430160	Lsi02G026280	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G430160	MELO3C023500.2	Melon (DHL92) v3.6.1	cumedB501
Csa7G430160	Cla97C09G165900	Watermelon (97103) v2	cuwmbB570
Csa7G430160	Bhi09G000469	Wax gourd	cuwgoB704
Csa7G430160	CSPI07G19730	Wild cucumber (PI 183967)	cpicuB354
Csa7G430160	Cucsa.049890	Cucumber (Gy14) v1	cgycuB031
Csa7G430160	CmaCh17G009210	Cucurbita maxima (Rimu)	cmacuB388
Csa7G430160	CmaCh08G005650	Cucurbita maxima (Rimu)	cmacuB914
Csa7G430160	CmoCh08G005570	Cucurbita moschata (Rifu)	cmocuB900
Csa7G430160	CmoCh17G008920	Cucurbita moschata (Rifu)	cmocuB378
Csa7G430160	Cp4.1LG12g07080	Cucurbita pepo (Zucchini)	cpecuB161
Csa7G430160	Cp4.1LG17g08400	Cucurbita pepo (Zucchini)	cpecuB343
Csa7G430160	Carg13480	Silver-seed gourd	carcuB0484
Csa7G430160	Carg18714	Silver-seed gourd	carcuB0387

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G430160	Cucumber (Gy14) v2	cgybcuB323
Csa7G430160	Cucumber (Chinese Long) v2	cucuB127