Cp4.1LG12g07080 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g07080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG12 : 7180344 .. 7180754 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACGGGAACATCGAACAATGACGATCAATACGAGAGGTTTGGCACAAAAGGGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGGAAAGCGGAAATAGGGTCGGACGAGAGGAACGGAGAAAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGCTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAATGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCGACACCAGCTGATGAAGATGGCAATTAGAAAAAAATCTTTCCCCTAA

mRNA sequence

ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACGGGAACATCGAACAATGACGATCAATACGAGAGGTTTGGCACAAAAGGGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGGAAAGCGGAAATAGGGTCGGACGAGAGGAACGGAGAAAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGCTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAATGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCGACACCAGCTGATGAAGATGGCAATTAGAAAAAAATCTTTCCCCTAA

Coding sequence (CDS)

ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACGGGAACATCGAACAATGACGATCAATACGAGAGGTTTGGCACAAAAGGGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGGAAAGCGGAAATAGGGTCGGACGAGAGGAACGGAGAAAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGCTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAATGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCGACACCAGCTGATGAAGATGGCAATTAGAAAAAAATCTTTCCCCTAA

Protein sequence

MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKGFENNDHKSLKQLINGEGKAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMVGKFLRNLIKGGGDRHQLMKMAIRKKSFP
Homology
[Close]
BLAST of Cp4.1LG12g07080 vs. TrEMBL
Match: A0A0A0KBK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430160 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.8e-45
Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 1 

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYE-RFGTKGFENNDHKSLKQLINGE 60
           +SHK+HYDISMSKRTRKPAKIQDE+Q   +N+DD      G +   NNDHKSLKQLI+GE
Sbjct: 6   ISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQLISGE 65

Query: 61  GKAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMVGKFLRNLIKGG 120
           GKAEI SDE N ERNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKK+VGKFLRNLIKGG
Sbjct: 66  GKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125

Query: 121 GD--RHQLMKMAIRKKSF 136
           GD  +HQLMK  IRKKSF
Sbjct: 126 GDHHQHQLMKKPIRKKSF 143

[Close]
BLAST of Cp4.1LG12g07080 vs. TrEMBL
Match: V7BT09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G042700g PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-11
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = 1 

Query: 2   SHKRHYDISMSKRTRK---PAKIQDEIQTGTSN---NDDQYERFGT-----KGFENNDHK 61
           S KR YDI+MS+RTRK   P +  ++ ++   +    DD+ +   T     K    NDHK
Sbjct: 7   SVKRPYDITMSRRTRKHQFPVQGNEKSKSAMGDAAPKDDKLKVQATTIGEVKQGGENDHK 66

Query: 62  SLKQLINGEGKAEI---GSDERN-GERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKK 121
           SLKQLI G+   E     SDER  G RNSLG+HF+EEE   LQ+V+ Q ++ LQG+K KK
Sbjct: 67  SLKQLIIGDDDKEAMKGNSDERGKGSRNSLGEHFTEEEKQHLQLVRMQQKENLQGLKFKK 126

Query: 122 MVGKF---LRNLIKGGGDRH 124
           +V ++   L +L+K   D H
Sbjct: 127 LVSRYAKVLGHLLKAKRDPH 146

[Close]
BLAST of Cp4.1LG12g07080 vs. TrEMBL
Match: A2Q3C1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g062280 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-11
Identity = 61/136 (44.85%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 2   SHKRHYDISMSKRTRKPAKIQDE-----IQTGTSNNDDQYERFGTKGFENN-DHKSLKQL 61
           S KRHYDI+MS+RTRK   + +E     ++T    + +       +G ENN DHKSLKQL
Sbjct: 6   SAKRHYDITMSRRTRKQQSLANEKPISKVETPKDVSLETTIPEVKEGNENNIDHKSLKQL 65

Query: 62  INGEGKAEI----GSDERNGE-RNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMV-- 121
           I GE K        SDE   + RNSLG+HF+EEE   LQ+V+ Q +D LQG+K KK+V  
Sbjct: 66  IVGEEKESTKKCSSSDEGESKGRNSLGEHFTEEE-KQLQLVRMQQKDNLQGLKFKKLVRR 125

Query: 122 -GKFLRNLIKGGGDRH 124
             K L +++K   D H
Sbjct: 126 YAKVLGHMMKSKRDPH 140

[Close]
BLAST of Cp4.1LG12g07080 vs. TrEMBL
Match: A0A059ATJ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02808 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 5   RHYDISMSKRTRKPAKIQDEIQ----TGTSNNDD-----QYERFGTKGFENNDHKSLKQL 64
           R YD++MSKRTRKP K+++ I     TG + +         E+  T     +D +SLKQL
Sbjct: 10  RSYDLAMSKRTRKPLKLEETISDISVTGFARSQGSEAFLDQEKGITVEELASDRQSLKQL 69

Query: 65  INGEGKAEIGSDERNGERNSLGKHFSEEEINALQIVK---KQHEDGLQGVKLKKMV---G 124
           IN EGK  + S E    R+SLG HF+EE +  LQ+V+   KQ + G +G+KLK MV    
Sbjct: 70  INSEGKPPLESGEER-RRSSLGHHFTEEAVTQLQVVRVRAKQRQGGAEGMKLKGMVSRCA 129

Query: 125 KFLRNLIKG-----GGDRHQLM 127
           K L  LIKG     GG + QL+
Sbjct: 130 KVLSQLIKGHPPPAGGSKKQLI 150

[Close]
BLAST of Cp4.1LG12g07080 vs. TrEMBL
Match: A0A061G6L8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026922 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-11
Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 1 

Query: 4   KRHYDISMSKRTRKPAKIQDEIQTGTSN-------------------NDDQYERFGTKGF 63
           KRHYDI++SKRTRKP  +Q+    GTSN                   +DD  E    +G 
Sbjct: 9   KRHYDITLSKRTRKPLDLQE--ANGTSNIASSKWDNPLKIFPRKAADDDDDDE---DEGE 68

Query: 64  ENNDHKSLKQLINGE-GKAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQ-GV 123
           E++DHKSLKQLING+ G+A+  +  R+  R+SL +HF++EE   LQ+VKK  +DG+  G 
Sbjct: 69  ESSDHKSLKQLINGDGGEAKEETSCRSSGRSSLVQHFNQEE-KQLQLVKKNQQDGVHGGA 128

Query: 124 KLKKMVGKF---LRNLIKG------GGDRHQLMKMAI 131
           KLK M+ ++   L  L+K       G ++  L+++ +
Sbjct: 129 KLKGMMSRYAKVLSRLVKAKREPRLGSNKKHLLRLTM 159

[Close]
BLAST of Cp4.1LG12g07080 vs. NCBI nr
Match: gi|778728804|ref|XP_011659480.1| (PREDICTED: uncharacterized protein LOC105436185 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 1 

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYE-RFGTKGFENNDHKSLKQLINGE 60
           +SHK+HYDISMSKRTRKPAKIQDE+Q   +N+DD      G +   NNDHKSLKQLI+GE
Sbjct: 6   ISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQLISGE 65

Query: 61  GKAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMVGKFLRNLIKGG 120
           GKAEI SDE N ERNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKK+VGKFLRNLIKGG
Sbjct: 66  GKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125

Query: 121 GD--RHQLMKMAIRKKSF 136
           GD  +HQLMK  IRKKSF
Sbjct: 126 GDHHQHQLMKKPIRKKSF 143

[Close]
BLAST of Cp4.1LG12g07080 vs. NCBI nr
Match: gi|659122589|ref|XP_008461224.1| (PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-43
Identity = 102/137 (74.45%), Postives = 113/137 (82.48%), Query Frame = 1 

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKGFENNDHKSLKQLINGE 60
           +SHK+HYDISMSKRTRKPAKIQDE+Q  TS +D       G +   NNDHKSLKQLI+GE
Sbjct: 6   ISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQLISGE 65

Query: 61  GKAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMVGKFLRNLIKGG 120
           GKAE   DE N ERNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKK+VGKFLRNLIKGG
Sbjct: 66  GKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125

Query: 121 GD-RHQLMKMAIRKKSF 136
           GD +HQLMK   RKKSF
Sbjct: 126 GDHQHQLMKKPTRKKSF 142

[Close]
BLAST of Cp4.1LG12g07080 vs. NCBI nr
Match: gi|1009105988|ref|XP_015901462.1| (PREDICTED: uncharacterized protein LOC107434481 [Ziziphus jujuba])

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-14
Identity = 64/133 (48.12%), Postives = 83/133 (62.41%), Query Frame = 1 

Query: 4   KRHYDISMSKRTRKPAKIQDEIQT-----GTSNNDDQY--ERFGTKGFENNDHKSLKQLI 63
           K HYDISMSKRTRKP   +D  +      G  N  ++    R  +   E N HKSLKQLI
Sbjct: 10  KLHYDISMSKRTRKPLNTRDANRKYSPPEGDLNGGEEGGGRRESSLDGEENGHKSLKQLI 69

Query: 64  NGEGKAEI-----GSDERNGE----RNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKM 118
           NG+GKA +     G D+R+ E    R+SLG+HF+EEE N LQ++  Q ++GLQG KLKKM
Sbjct: 70  NGDGKAVVVIKSGGGDDRHEEISKGRSSLGQHFTEEEKN-LQLITTQQKEGLQGRKLKKM 129

[Close]
BLAST of Cp4.1LG12g07080 vs. NCBI nr
Match: gi|593697276|ref|XP_007149120.1| (hypothetical protein PHAVU_005G042700g [Phaseolus vulgaris])

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-11
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = 1 

Query: 2   SHKRHYDISMSKRTRK---PAKIQDEIQTGTSN---NDDQYERFGT-----KGFENNDHK 61
           S KR YDI+MS+RTRK   P +  ++ ++   +    DD+ +   T     K    NDHK
Sbjct: 7   SVKRPYDITMSRRTRKHQFPVQGNEKSKSAMGDAAPKDDKLKVQATTIGEVKQGGENDHK 66

Query: 62  SLKQLINGEGKAEI---GSDERN-GERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKK 121
           SLKQLI G+   E     SDER  G RNSLG+HF+EEE   LQ+V+ Q ++ LQG+K KK
Sbjct: 67  SLKQLIIGDDDKEAMKGNSDERGKGSRNSLGEHFTEEEKQHLQLVRMQQKENLQGLKFKK 126

Query: 122 MVGKF---LRNLIKGGGDRH 124
           +V ++   L +L+K   D H
Sbjct: 127 LVSRYAKVLGHLLKAKRDPH 146

[Close]
BLAST of Cp4.1LG12g07080 vs. NCBI nr
Match: gi|922386512|ref|XP_003595828.2| (hypothetical protein MTR_2g062280 [Medicago truncatula])

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-11
Identity = 61/136 (44.85%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 2   SHKRHYDISMSKRTRKPAKIQDE-----IQTGTSNNDDQYERFGTKGFENN-DHKSLKQL 61
           S KRHYDI+MS+RTRK   + +E     ++T    + +       +G ENN DHKSLKQL
Sbjct: 6   SAKRHYDITMSRRTRKQQSLANEKPISKVETPKDVSLETTIPEVKEGNENNIDHKSLKQL 65

Query: 62  INGEGKAEI----GSDERNGE-RNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMV-- 121
           I GE K        SDE   + RNSLG+HF+EEE   LQ+V+ Q +D LQG+K KK+V  
Sbjct: 66  IVGEEKESTKKCSSSDEGESKGRNSLGEHFTEEE-KQLQLVRMQQKDNLQGLKFKKLVRR 125

Query: 122 -GKFLRNLIKGGGDRH 124
             K L +++K   D H
Sbjct: 126 YAKVLGHMMKSKRDPH 140

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g07080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBK8_CUCSA7.8e-4576.09Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430160 PE=4 SV=1[more]
V7BT09_PHAVU1.5e-1142.86Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G042700g PE=4 SV=1[more]
A2Q3C1_MEDTR1.9e-1144.85Uncharacterized protein OS=Medicago truncatula GN=MTR_2g062280 PE=4 SV=1[more]
A0A059ATJ1_EUCGR2.5e-1142.25Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02808 PE=4 SV=1[more]
A0A061G6L8_THECC3.3e-1138.85Uncharacterized protein OS=Theobroma cacao GN=TCM_026922 PE=4 SV=1[more]
BLAST of Cp4.1LG12g07080 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g07080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778728804|ref|XP_011659480.1|1.1e-4476.09PREDICTED: uncharacterized protein LOC105436185 [Cucumis sativus][more]
gi|659122589|ref|XP_008461224.1|2.1e-4374.45PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo][more]
gi|1009105988|ref|XP_015901462.1|2.7e-1448.12PREDICTED: uncharacterized protein LOC107434481 [Ziziphus jujuba][more]
gi|593697276|ref|XP_007149120.1|2.1e-1142.86hypothetical protein PHAVU_005G042700g [Phaseolus vulgaris][more]
gi|922386512|ref|XP_003595828.2|2.8e-1144.85hypothetical protein MTR_2g062280 [Medicago truncatula][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07080.1Cp4.1LG12g07080.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07080Cucsa.049890Cucumber (Gy14) v1cgycpeB0046
Cp4.1LG12g07080CmaCh17G009210Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g07080CmaCh08G005650Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g07080CmoCh08G005570Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g07080CmoCh17G008920Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g07080Cla015289Watermelon (97103) v1cpewmB131
Cp4.1LG12g07080Csa7G430160Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g07080MELO3C023500Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g07080ClCG09G003640Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g07080CSPI07G19730Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g07080Lsi02G026280Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g07080MELO3C023500.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07080CsaV3_7G031540Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07080Bhi09G000469Wax gourdcpewgoB0201
Cp4.1LG12g07080Carg18714Silver-seed gourdcarcpeB0493
Cp4.1LG12g07080Carg13480Silver-seed gourdcarcpeB0631
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g07080Cp4.1LG17g08400Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g07080Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g07080Cucurbita pepo (Zucchini)cpecpeB185
Cp4.1LG12g07080Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g07080Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g07080Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g07080Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g07080Wild cucumber (PI 183967)cpecpiB138
Cp4.1LG12g07080Cucumber (Chinese Long) v2cpecuB137
Cp4.1LG12g07080Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g07080Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g07080Melon (DHL92) v3.5.1cpemeB133
Cp4.1LG12g07080Cucumber (Gy14) v2cgybcpeB308
Cp4.1LG12g07080Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07080Silver-seed gourdcarcpeB1144