CSPI07G19730 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G19730
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr7 : 17278072 .. 17278700 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTTCCATTTTGTGAAGCAAATGGGGAGTGAGAGCATATCTCATAAACAACATTATGATATCTCCATGTCAAAGAGAACTAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAGATTCTCCCAACAAACGATGACGATCTTATTATCATTGGTAAAGGAGATCAATCCGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAGTGGCGAAGGGAAGGCAGAAATAAGGTCGGACGAGGGCAACCGAGAAAGGAACTCGCTTGGCCAACACTTTAGTAAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTAGTTGGGAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCATCATCAACACCAGCTGATGAAGAAACCAATTAGAAAAAAGTCTTTTCTGTAATTCACGTTGAAAGGAAAAATATCCATTAAAAACTTCATCATTTTGCAGAGGTTGGTGAAAATGGAGTATTTGTTTTCTTTGTTGTTTAATTTCAATACTTCATAAGAGATTGTATATGAAAGGGTATATATGTGTGTGTATCTATGTTGTATAAATATTTGAAACTATGTTGT

mRNA sequence

ATGGGGAGTGAGAGCATATCTCATAAACAACATTATGATATCTCCATGTCAAAGAGAACTAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAGATTCTCCCAACAAACGATGACGATCTTATTATCATTGGTAAAGGAGATCAATCCGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAGTGGCGAAGGGAAGGCAGAAATAAGGTCGGACGAGGGCAACCGAGAAAGGAACTCGCTTGGCCAACACTTTAGTAAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTAGTTGGGAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCATCATCAACACCAGCTGATGAAGAAACCAATTAGAAAAAAGTCTTTTCTGTAA

Coding sequence (CDS)

ATGGGGAGTGAGAGCATATCTCATAAACAACATTATGATATCTCCATGTCAAAGAGAACTAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAGATTCTCCCAACAAACGATGACGATCTTATTATCATTGGTAAAGGAGATCAATCCGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAGTGGCGAAGGGAAGGCAGAAATAAGGTCGGACGAGGGCAACCGAGAAAGGAACTCGCTTGGCCAACACTTTAGTAAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTAGTTGGGAAATTTTTGAGAAATTTGATCAAAGGTGGTGGTGATCATCATCAACACCAGCTGATGAAGAAACCAATTAGAAAAAAGTCTTTTCTGTAA

Homology

[Close]

BLAST of CSPI07G19730 vs. TrEMBL
Match: A0A0A0KBK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430160 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-73
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60

Query: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120
           LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN
Sbjct: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120

Query: 121 LIKGGGDHHQHQLMKKPIRKKSFL 145
           LIKGGGDHHQHQLMKKPIRKKSFL
Sbjct: 121 LIKGGGDHHQHQLMKKPIRKKSFL 144

[Close]

BLAST of CSPI07G19730 vs. TrEMBL
Match: A0A067JCA4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05256 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-15
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSE    K  YDI+MSKRTRKP K            +D ++      ++++ D KSLKQ
Sbjct: 1   MGSECNPSKHRYDITMSKRTRKPLKSNMPQAHADLRGEDNLL------AKVDEDRKSLKQ 60

Query: 61  LISG--EGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKF- 120
           LI+G      E + D  NR RNSLGQHFS+EE   LQ++++Q+Q GLQ VKLK ++G++ 
Sbjct: 61  LINGIANNVEETKEDSENRGRNSLGQHFSEEE-KQLQLMRRQNQQGLQAVKLKGIMGRYV 120

Query: 121 --LRNLIKGGGDHHQHQL--MKKPI 139
             L +LIK   D  +  +   KKP+
Sbjct: 121 KVLSHLIKVKRDSTRTNIRPRKKPV 138

[Close]

BLAST of CSPI07G19730 vs. TrEMBL
Match: A2Q3C1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g062280 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14
Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 7   SHKQHYDISMSKRTRKPAKIQDELQI--LPTNDD---DLIIIGKGDQSEINNDHKSLKQL 66
           S K+HYDI+MS+RTRK   + +E  I  + T  D   +  I    + +E N DHKSLKQL
Sbjct: 6   SAKRHYDITMSRRTRKQQSLANEKPISKVETPKDVSLETTIPEVKEGNENNIDHKSLKQL 65

Query: 67  ISGEGKAEIR----SDEG-NRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVV-- 126
           I GE K   +    SDEG ++ RNSLG+HF++EE   LQ+V+ Q +D LQG+K KK+V  
Sbjct: 66  IVGEEKESTKKCSSSDEGESKGRNSLGEHFTEEE-KQLQLVRMQQKDNLQGLKFKKLVRR 125

Query: 127 -GKFLRNLIKGGGDHHQHQLMKKPIRKKS 143
             K L +++K   D H     KKP+ K S
Sbjct: 126 YAKVLGHMMKSKRDPHLGDAGKKPVFKLS 153

[Close]

BLAST of CSPI07G19730 vs. TrEMBL
Match: V7BT09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G042700g PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-13
Identity = 66/160 (41.25%), Postives = 90/160 (56.25%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPA-------KIQDELQILPTNDDDLII----IGKGDQS 60
           M  +S S K+ YDI+MS+RTRK         K +  +      DD L +    IG+  Q 
Sbjct: 1   MEVQSPSVKRPYDITMSRRTRKHQFPVQGNEKSKSAMGDAAPKDDKLKVQATTIGEVKQG 60

Query: 61  EINNDHKSLKQLISGEGKAEI---RSDE-GNRERNSLGQHFSKEEINNLQIVKKQHQDGL 120
              NDHKSLKQLI G+   E     SDE G   RNSLG+HF++EE  +LQ+V+ Q ++ L
Sbjct: 61  G-ENDHKSLKQLIIGDDDKEAMKGNSDERGKGSRNSLGEHFTEEEKQHLQLVRMQQKENL 120

Query: 121 QGVKLKKVVGKF---LRNLIKGGGDHHQHQLMKKPIRKKS 143
           QG+K KK+V ++   L +L+K   D H     KKP+ K S
Sbjct: 121 QGLKFKKLVSRYAKVLGHLLKAKRDPHLGDAGKKPVFKLS 159

[Close]

BLAST of CSPI07G19730 vs. TrEMBL
Match: A0A0L9UJE2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g042000 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-13
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPA-KIQDELQILPTNDDDLIIIGKGDQSEI-------- 60
           M  +S S K+ YDI+MS+RTRK    +Q   +      D+ + +     + I        
Sbjct: 1   MEVQSPSVKRPYDITMSRRTRKQQFSVQGNEKPKSAMGDEKLSVETAQTNGIIAEVKHGG 60

Query: 61  NNDHKSLKQLISG---EGKAEIRSDEGNR-ERNSLGQHFSKEEINNLQIVKKQHQDGLQG 120
            +DHKSLKQLI G   E K    SDEG +  RNSLG+HF++EE  +LQ+V+ Q +D LQG
Sbjct: 61  ESDHKSLKQLIIGDDNETKGNNNSDEGGKGSRNSLGEHFTEEEKQHLQLVRMQQKDNLQG 120

Query: 121 VKLKKVVGKF---LRNLIKGGGDHHQHQLMKKPIRKKS 143
           +K KK+V ++   L +L+K   D H     KKP  K S
Sbjct: 121 LKFKKLVSRYAKVLGHLLKAKRDPHLGDAGKKPFFKLS 158

[Close]

BLAST of CSPI07G19730 vs. NCBI nr
Match: gi|778728804|ref|XP_011659480.1| (PREDICTED: uncharacterized protein LOC105436185 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.1e-73
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60

Query: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120
           LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN
Sbjct: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120

Query: 121 LIKGGGDHHQHQLMKKPIRKKSFL 145
           LIKGGGDHHQHQLMKKPIRKKSFL
Sbjct: 121 LIKGGGDHHQHQLMKKPIRKKSFL 144

[Close]

BLAST of CSPI07G19730 vs. NCBI nr
Match: gi|659122589|ref|XP_008461224.1| (PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-62
Identity = 130/144 (90.28%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSESISHKQHYDISMSKRTRKPAKIQDELQ   + DD L II KGD+SE NNDHKSLKQ
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQ 60

Query: 61  LISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120
           LISGEGKAE R DEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN
Sbjct: 61  LISGEGKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRN 120

Query: 121 LIKGGGDHHQHQLMKKPIRKKSFL 145
           LIKGGGD HQHQLMKKP RKKSFL
Sbjct: 121 LIKGGGD-HQHQLMKKPTRKKSFL 143

[Close]

BLAST of CSPI07G19730 vs. NCBI nr
Match: gi|1009105988|ref|XP_015901462.1| (PREDICTED: uncharacterized protein LOC107434481 [Ziziphus jujuba])

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16
Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 1


Query: 1   MGSE-SISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGD---QSEIN---N 60
           MGSE +I  K HYDISMSKRTRKP   +D  +     + DL    +G    +S ++   N
Sbjct: 1   MGSECNIPQKLHYDISMSKRTRKPLNTRDANRKYSPPEGDLNGGEEGGGRRESSLDGEEN 60

Query: 61  DHKSLKQLISGEGKAEI---------RSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDG 120
            HKSLKQLI+G+GKA +         R +E ++ R+SLGQHF++EE  NLQ++  Q ++G
Sbjct: 61  GHKSLKQLINGDGKAVVVIKSGGGDDRHEEISKGRSSLGQHFTEEE-KNLQLITTQQKEG 120

Query: 121 LQGVKLKKVVGKF---LRNLIKGGGDHHQHQLMKKPI 139
           LQG KLKK+V ++   L +LIK   D    +  KKP+
Sbjct: 121 LQGRKLKKMVSRYAKVLSHLIKLKRDSSLKESQKKPV 156

[Close]

BLAST of CSPI07G19730 vs. NCBI nr
Match: gi|802795909|ref|XP_012092626.1| (PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas])

HSP 1 Score: 89.4 bits (220), Expect = 5.8e-15
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSE    K  YDI+MSKRTRKP K            +D ++      ++++ D KSLKQ
Sbjct: 1   MGSECNPSKHRYDITMSKRTRKPLKSNMPQAHADLRGEDNLL------AKVDEDRKSLKQ 60

Query: 61  LISG--EGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKF- 120
           LI+G      E + D  NR RNSLGQHFS+EE   LQ++++Q+Q GLQ VKLK ++G++ 
Sbjct: 61  LINGIANNVEETKEDSENRGRNSLGQHFSEEE-KQLQLMRRQNQQGLQAVKLKGIMGRYV 120

Query: 121 --LRNLIKGGGDHHQHQL--MKKPI 139
             L +LIK   D  +  +   KKP+
Sbjct: 121 KVLSHLIKVKRDSTRTNIRPRKKPV 138

[Close]

BLAST of CSPI07G19730 vs. NCBI nr
Match: gi|645250852|ref|XP_008231406.1| (PREDICTED: uncharacterized protein LOC103330586 [Prunus mume])

HSP 1 Score: 88.6 bits (218), Expect = 9.9e-15
Identity = 65/134 (48.51%), Postives = 86/134 (64.18%), Query Frame = 1


Query: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQ 60
           MGSE   +K+ YDISMSKRTRK    +D+     +  +D      GDQ   N++ KS KQ
Sbjct: 1   MGSECSINKRCYDISMSKRTRKSFHHRDQSCPSKSRVED------GDQD--NDNRKSFKQ 60

Query: 61  LISGEGKAEI---RSDEGNRERNSLGQHFSKEEINNLQIVKKQHQD-GLQGVKLKKVV-- 120
           LI G+ KA++     D+G+R R+SLGQHF+ EE N+LQ+VKKQ +  GLQGVKLKK+V  
Sbjct: 61  LIDGDEKAKLIIKSGDQGSRARSSLGQHFTDEE-NHLQLVKKQQKTAGLQGVKLKKLVSR 120

Query: 121 -GKFLRNLIKGGGD 128
             K  R+L+K   D
Sbjct: 121 CAKVFRHLVKAESD 125

The following BLAST results are available for this feature:

BLAST of CSPI07G19730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G19730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBK8_CUCSA	1.5e-73	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430160 PE=4 SV=1	[more]
A0A067JCA4_JATCU	4.0e-15	42.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05256 PE=4 SV=1	[more]
A2Q3C1_MEDTR	1.2e-14	44.30	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g062280 PE=4 SV=1	[more]
V7BT09_PHAVU	2.2e-13	41.25	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G042700g PE=4 SV=1	[more]
A0A0L9UJE2_PHAAN	2.9e-13	39.87	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g042000 PE=4 SV=1	[more]

BLAST of CSPI07G19730 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G19730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728804\|ref\|XP_011659480.1\|	2.1e-73	100.00	PREDICTED: uncharacterized protein LOC105436185 [Cucumis sativus]	[more]
gi\|659122589\|ref\|XP_008461224.1\|	1.7e-62	90.28	PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo]	[more]
gi\|1009105988\|ref\|XP_015901462.1\|	3.1e-16	43.95	PREDICTED: uncharacterized protein LOC107434481 [Ziziphus jujuba]	[more]
gi\|802795909\|ref\|XP_012092626.1\|	5.8e-15	42.76	PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas]	[more]
gi\|645250852\|ref\|XP_008231406.1\|	9.9e-15	48.51	PREDICTED: uncharacterized protein LOC103330586 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G19730.1	CSPI07G19730.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G19730	Cla015289	Watermelon (97103) v1	cpiwmB585
CSPI07G19730	Csa7G430160	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G19730	MELO3C023500	Melon (DHL92) v3.5.1	cpimeB525
CSPI07G19730	ClCG09G003640	Watermelon (Charleston Gray)	cpiwcgB553
CSPI07G19730	Lsi02G026280	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G19730	MELO3C023500.2	Melon (DHL92) v3.6.1	cpimedB512
CSPI07G19730	CsaV3_7G031540	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G19730	Cla97C09G165900	Watermelon (97103) v2	cpiwmbB596
CSPI07G19730	Bhi09G000469	Wax gourd	cpiwgoB716
CSPI07G19730	Cucsa.049890	Cucumber (Gy14) v1	cgycpiB032
CSPI07G19730	CmaCh08G005650	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G19730	CmaCh17G009210	Cucurbita maxima (Rimu)	cmacpiB392
CSPI07G19730	CmoCh17G008920	Cucurbita moschata (Rifu)	cmocpiB381
CSPI07G19730	CmoCh08G005570	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G19730	Cp4.1LG17g08400	Cucurbita pepo (Zucchini)	cpecpiB344
CSPI07G19730	Cp4.1LG12g07080	Cucurbita pepo (Zucchini)	cpecpiB163
CSPI07G19730	Carg13480	Silver-seed gourd	carcpiB0489
CSPI07G19730	Carg18714	Silver-seed gourd	carcpiB0391

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G19730	Wild cucumber (PI 183967)	cpicpiB142
CSPI07G19730	Cucumber (Chinese Long) v2	cpicuB338
CSPI07G19730	Watermelon (Charleston Gray)	cpiwcgB560
CSPI07G19730	Cucumber (Gy14) v2	cgybcpiB331