Csa7G074910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G074910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5161626 .. 5162318 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGACTAAGAAAGAACATTTCTCCAAAAAGAAAAAAGAAAAATAAAAAAAGAAAGGAAAAGGAAAAAAGAACGACGCGGAAAATTGAGAGAAACAGAGAAAATCGTTTCGAAATTTCTCAATCTGAAAGAAACCAGAAATCGAAAGCACACGTTCTTCAATCCGGCGGAGATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTGGTGGTCGTTGCCGAATCCGTGGGCGACGTTATACACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGAGTTCCGGTTCCTTTTGTGGGCTTTTACCCCTAAATTCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCAAAGTTAGTGTGAATTTTGTTTTTTGTTTTGTTTAGTAATTAAATGGAGGTATTATTGTAATTGATCTCTCTATTGGAAATAATCCAATTATCTTCTTTTTTTAGTACGAAATTACTCTCTCTCTCTCTCTTATCTGGGTTAGTACGAAACTATCGAATTGTTATTTGGTTGTAATCTGTTGGTTTTATCGTCATTTTGACGCCGGACCTGAAAGTCGCGCTTTAACTTCAATTATGTTCTTTCTTTCTTTTTCTTTTTCTTTTTTTAAAAAAAGAAAATGTATGAACTGGATGGGTATTTGTG

mRNA sequence

ATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTGGTGGTCGTTGCCGAATCCGTGGGCGACGTTATACACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGAGTTCCGGTTCCTTTTGTGGGCTTTTACCCCTAA

Coding sequence (CDS)

ATGGGGATTCAGAGATTAGAACTTTGTTTGGAGCTTCTGCGAATGGCTATCAATTTCGTGGTGGTCGTTGCCGAATCCGTGGGCGACGTTATACACCGGGAATGTCAACCGCAAGCTCTGCCGACGGCGGGCGGTAGAGTTCCGGTTCCTTTTGTGGGCTTTTACCCCTAA

Protein sequence

MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP*
Homology
[Close]
BLAST of Csa7G074910 vs. TrEMBL
Match: A0A0A0K3A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074910 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

[Close]
BLAST of Csa7G074910 vs. TrEMBL
Match: A0A0D2SML3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G239600 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-06
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 1 

Query: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 57
          M +Q+LE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1  MVLQKLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

[Close]
BLAST of Csa7G074910 vs. TAIR10
Match: AT3G19030.1 (AT3G19030.1 unknown protein)

HSP 1 Score: 46.2 bits (108), Expect = 7.8e-06
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 1 

Query: 4  QRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTA-GGR------VPVPFVGF 55
          Q+LE+C+EL+++A+ FV  VAESV +   +   P +LP   GGR      VP+P VGF
Sbjct: 4  QKLEICIELVKIAVVFVTTVAESVEEAFRK--PPPSLPAVHGGRRNNYAAVPIPLVGF 59

[Close]
BLAST of Csa7G074910 vs. NCBI nr
Match: gi|659109833|ref|XP_008454905.1| (PREDICTED: uncharacterized protein LOC103495210 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

[Close]
BLAST of Csa7G074910 vs. NCBI nr
Match: gi|1009115522|ref|XP_015874275.1| (PREDICTED: uncharacterized protein LOC107411246 [Ziziphus jujuba])

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-09
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 1 

Query: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M IQR+E+C+ELL+MAI FV+VVAE+VG VIH+   P  + ++    P+PF+GFYP
Sbjct: 1  MVIQRIEMCVELLKMAIEFVIVVAEAVGIVIHQNMSPAFIRSSAYPTPLPFIGFYP 56

[Close]
BLAST of Csa7G074910 vs. NCBI nr
Match: gi|763765151|gb|KJB32405.1| (hypothetical protein B456_005G239600 [Gossypium raimondii])

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-06
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 1 

Query: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 57
          M +Q+LE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1  MVLQKLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

The following BLAST results are available for this feature:
BLAST of Csa7G074910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3A1_CUCSA1.2e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074910 PE=4 SV=1[more]
A0A0D2SML3_GOSRA3.0e-0649.12Uncharacterized protein OS=Gossypium raimondii GN=B456_005G239600 PE=4 SV=1[more]
BLAST of Csa7G074910 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19030.17.8e-0644.83 unknown protein[more]
BLAST of Csa7G074910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109833|ref|XP_008454905.1|1.7e-23100.00PREDICTED: uncharacterized protein LOC103495210 [Cucumis melo][more]
gi|1009115522|ref|XP_015874275.1|2.4e-0955.36PREDICTED: uncharacterized protein LOC107411246 [Ziziphus jujuba][more]
gi|763765151|gb|KJB32405.1|4.3e-0649.12hypothetical protein B456_005G239600 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU101978cucumber EST collection version 3.0transcribed_cluster
CU105150cucumber EST collection version 3.0transcribed_cluster
CU106582cucumber EST collection version 3.0transcribed_cluster
CU132787cucumber EST collection version 3.0transcribed_cluster
CU163460cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G074910.1Csa7G074910.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU105150CU105150transcribed_cluster
CU106582CU106582transcribed_cluster
CU163460CU163460transcribed_cluster
CU132787CU132787transcribed_cluster
CU101978CU101978transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G074910Cla015987Watermelon (97103) v1cuwmB605
Csa7G074910MELO3C018426Melon (DHL92) v3.5.1cumeB530
Csa7G074910MELO3C018426.2Melon (DHL92) v3.6.1cumedB509
Csa7G074910Cla97C02G032620Watermelon (97103) v2cuwmbB530
Csa7G074910CSPI07G07890Wild cucumber (PI 183967)cpicuB354
Csa7G074910Cucsa.220120Cucumber (Gy14) v1cgycuB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G074910Melon (DHL92) v3.6.1cumedB526
Csa7G074910Silver-seed gourdcarcuB0233
Csa7G074910Silver-seed gourdcarcuB0827
Csa7G074910Watermelon (97103) v2cuwmbB516
Csa7G074910Watermelon (97103) v2cuwmbB554
Csa7G074910Watermelon (97103) v2cuwmbB569
Csa7G074910Wax gourdcuwgoB663
Csa7G074910Wax gourdcuwgoB686
Csa7G074910Cucumber (Chinese Long) v2cucuB079
Csa7G074910Cucumber (Chinese Long) v2cucuB083
Csa7G074910Cucurbita maxima (Rimu)cmacuB146
Csa7G074910Cucurbita maxima (Rimu)cmacuB528
Csa7G074910Cucurbita moschata (Rifu)cmocuB137
Csa7G074910Cucurbita moschata (Rifu)cmocuB519
Csa7G074910Melon (DHL92) v3.5.1cumeB549
Csa7G074910Watermelon (Charleston Gray)cuwcgB538
Csa7G074910Watermelon (Charleston Gray)cuwcgB547
Csa7G074910Watermelon (Charleston Gray)cuwcgB568
Csa7G074910Watermelon (97103) v1cuwmB576
Csa7G074910Watermelon (97103) v1cuwmB595
Csa7G074910Cucurbita pepo (Zucchini)cpecuB258
Csa7G074910Cucurbita pepo (Zucchini)cpecuB695
Csa7G074910Bottle gourd (USVL1VR-Ls)culsiB492
Csa7G074910Bottle gourd (USVL1VR-Ls)culsiB495
Csa7G074910Bottle gourd (USVL1VR-Ls)culsiB537
Csa7G074910Cucumber (Gy14) v2cgybcuB087
Csa7G074910Cucumber (Gy14) v2cgybcuB091
Csa7G074910Cucumber (Gy14) v2cgybcuB324