Csa6G501290 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G501290
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein, putative; contains IPR002885 (Pentatricopeptide repeat)
LocationChr6 : 25102071 .. 25104304 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGCGAGGAATTTACAAAATCAACCATTTACTTCATCGGATTTTGCTATCCTCTCTCCCTGTCGAACTCCAAGGTACTTCAAATTCTCCAATGCCTCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTATTCTTCTTCCCAACTCTCCCGGCTATGGCTTCCACTCCCTTCATCTATAAAGAAAGCCGTTTCGACTCGAGTGGTCTGCATTTCGACTCGACCCAGTAGGAAATTTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATTAGAAATTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTTCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTGAATGTCTCGAGGTTCGCTTCTCTTCTTTTGAACTCTGAATTTGAGCCTATGGGTATTGACTTTTGGAACTTGGATTGATGGGTAGTGGTGAAAATGCTCAAAGACGGTTGATTGAATTTGAAATCGAGGATATGAATTTTCAATTTGTGAACATTACACAGAATTAATTGAATTTTCACTGTAGTTCAAGCTCTATTTAGGCATAGATGAAGAAGGGAGAGTCTACATTTTTCTGCTATTATGTTTTATTGATGTGTTTTCATCTCCAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGTCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACATCTTCATTCTAAGGACAAAGCTAAAGCTTTAGTTAAAGTCCTTTCGTACTTCGAGAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTCGATGAGAGTGTTGTTTCAGCTGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGCTTACTACGATCGAAGGAGAGGCCAACACTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCCAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTACCCTTGGAAGCCGATTTGCTTTTTGAGAGTGCAGGTAATATGAGGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATAAGAAGGAACTTCTGGAGAAGCTCTTGAAGAATATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACAAGAAAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGATAGTAGTGTGGAAAAACAGTCATCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAAGATCTTCAAGAACTAGAACAGGTTCACGAAACTCAGAAAGTGGTGTGGAAAACCATGCTCCAGAGCTAGGGTTAGCTTAAGAATTTCCTTTTTGTGGTCAATCTACATTCTTTAGAAGCTTCTTGACTTCTCCTCTTAAAATTTGGAGAATGGTACGGCAGTTTTACAAAAATTACAGGAATGTTGAGTTTTGAAAAGAAACCAAAATTTTGTATATATGCTCATTTATTTTCCCATGAAATTTTATGATTTGATGAGGTCCGACTCCTCACAAAATTGGGATGTACAGACAAACTAAGTGTGCTTTGTATTTGTGGATTATATAAATTGATTCAATTGTCATCGGAGAGCCTAAGCAACCGTCTGAACCATTTTTCT

mRNA sequence

ATGCCTCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTATTCTTCTTCCCAACTCTCCCGGCTATGGCTTCCACTCCCTTCATCTATAAAGAAAGCCGTTTCGACTCGAGTGGTCTGCATTTCGACTCGACCCAGTAGGAAATTTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATTAGAAATTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTTCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTGAATGTCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGTCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACATCTTCATTCTAAGGACAAAGCTAAAGCTTTAGTTAAAGTCCTTTCGTACTTCGAGAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTCGATGAGAGTGTTGTTTCAGCTGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGCTTACTACGATCGAAGGAGAGGCCAACACTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCCAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTACCCTTGGAAGCCGATTTGCTTTTTGAGAGTGCAGGTAATATGAGGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATAAGAAGGAACTTCTGGAGAAGCTCTTGAAGAATATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACAAGAAAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGATAGTAGTGTGGAAAAACAGTCATCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAAGATCTTCAAGAACTAGAACAGGTTCACGAAACTCAGAAAGTGGTGTGGAAAACCATGCTCCAGAGCTAGGGTTAGCTTAA

Coding sequence (CDS)

ATGCCTCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTATTCTTCTTCCCAACTCTCCCGGCTATGGCTTCCACTCCCTTCATCTATAAAGAAAGCCGTTTCGACTCGAGTGGTCTGCATTTCGACTCGACCCAGTAGGAAATTTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATTAGAAATTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTTCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTGAATGTCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGTCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACATCTTCATTCTAAGGACAAAGCTAAAGCTTTAGTTAAAGTCCTTTCGTACTTCGAGAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTCGATGAGAGTGTTGTTTCAGCTGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGCTTACTACGATCGAAGGAGAGGCCAACACTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCCAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTACCCTTGGAAGCCGATTTGCTTTTTGAGAGTGCAGGTAATATGAGGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATAAGAAGGAACTTCTGGAGAAGCTCTTGAAGAATATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACAAGAAAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGATAGTAGTGTGGAAAAACAGTCATCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAAGATCTTCAAGAACTAGAACAGGTTCACGAAACTCAGAAAGTGGTGTGGAAAACCATGCTCCAGAGCTAGGGTTAGCTTAA

Protein sequence

MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA*
Homology
[Close]
BLAST of Csa6G501290 vs. Swiss-Prot
Match: PP358_ARATH (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 1.1e-172
Identity = 303/466 (65.02%), Postives = 362/466 (77.68%), Query Frame = 1 

Query: 34  KKAVSTRVVCISTRPSRKFGVKTDRS-EAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTE 93
           +++  TR+ C +    RK   +     E   LVR ++   SD+EPL+KTLDKYV+V+R +
Sbjct: 39  RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98

Query: 94  HCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSE 153
           HCFLLFEELGK DKWL+CLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFSE
Sbjct: 99  HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158

Query: 154 MRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAF 213
           M+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218

Query: 214 AQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDI 273
           AQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAYGKNG IKEME +L RM+SN+ KPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278

Query: 274 ISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRK 333
           I+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338

Query: 334 MKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 393
           M DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAML+VYC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398

Query: 394 PLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLD 453
            +EAD LF +A   RV PD++TYK LYKAYTKAD KE ++ L+K M+K GI+PNKRFFL+
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458

Query: 454 ALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESN 499
           AL   GS           +GS N  S+     SSR+R  P+    N
Sbjct: 459 ALEVFGS-------RLPGSGSENRKST----RSSRSRDSPKGRGGN 493

[Close]
BLAST of Csa6G501290 vs. Swiss-Prot
Match: PP216_ARATH (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.5e-39
Identity = 97/352 (27.56%), Postives = 169/352 (48.01%), Query Frame = 1 

Query: 100 ELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 159
           +L  + +WL+ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 160 PDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVD 219
           P   +Y AL+ A+  S      +    S  +KMK   +C+P++ TY+ L +A   A++ D
Sbjct: 157 PTVELYTALLAAYTRSN----LIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 220 QVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLL 279
            V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 280 IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGY 339
           +  +G     D ME  ++        P   TFN +I +YGK R+ +K   V   M+ + +
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 340 DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADL 399
             +  T  ++I  +            FD M + G +    T   +++ Y   GL  +   
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 400 LFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFF 451
             + A    +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]
BLAST of Csa6G501290 vs. Swiss-Prot
Match: PP279_ARATH (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.9e-37
Identity = 99/359 (27.58%), Postives = 169/359 (47.08%), Query Frame = 1 

Query: 99  EELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 158
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 66  DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125

Query: 159 RPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 218
           +P   VY +LI+ +     K++ L K  S  E MK +  CKP++ T+ +L     +  + 
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185

Query: 219 DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNL 278
           D V ++  ++    V     TYN ++D YGK G  +EME +LA M +     PD+ + N 
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245

Query: 279 LIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG 338
           +I SYG  +   KME  +        +P + TFN +I ++GKA + +K   V   M+   
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305

Query: 339 YDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD 398
           +  + VT   +I  +G    + K  ++F  M   G +    T  ++++ Y   GL ++ D
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365

Query: 399 LLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGT 457
            +     N  V  D+  +  +  AY +A     +++L   M++    P+K  F   + T
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 420

[Close]
BLAST of Csa6G501290 vs. Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-34
Identity = 99/411 (24.09%), Postives = 188/411 (45.74%), Query Frame = 1 

Query: 54  VKTDRSEAEELVRGIIRNFSDKEP---LLKTLDKYVRVMRTEHCFLLFEELGKRDKWLEC 113
           V  ++ +    V  +I   S   P   + + LD +   +      L+F+E   R  W   
Sbjct: 65  VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124

Query: 114 LEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALIT 173
           L +F++MQ+Q W   +  +Y+ +IS++G++G +   + +F EM + G       Y ALI 
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184

Query: 174 AHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAA-KVDQVNTLFKDLD 233
           A+     +       L   ++MK  E+  P+I+TYN +  A A+     + +  LF ++ 
Sbjct: 185 AY----GRNGRYETSLELLDRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 244

Query: 234 ESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFD 293
              +  DI TYN ++ A    G   E E++   M    I PD+ +++ L++++GK +  +
Sbjct: 245 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 304

Query: 294 KMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLI 353
           K+  +   +      P + ++N ++  Y K+   ++A  VF +M+  G  P+  T   L+
Sbjct: 305 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 364

Query: 354 MMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVF 413
            ++G        R++F  M +S  +   +T N +++V+   G   E   LF       + 
Sbjct: 365 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 424

Query: 414 PDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS 461
           PD  TY+ +  A  K    E   K+L+ M    I+P+ + +   +   G +
Sbjct: 425 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470


HSP 2 Score: 122.5 bits (306), Expect = 1.4e-26
Identity = 84/312 (26.92%), Postives = 146/312 (46.79%), Query Frame = 1 

Query: 130 YSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYF 189
           Y+ L+    K G I+ AM +F +M+ +GC P+ + Y+ L    L+   ++     V   F
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL----LNLFGQSGRYDDVRQLF 379

Query: 190 EKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGK 249
            +MK      P+  TYNIL   F +     +V TLF D+ E  +  D+ TY G++ A GK
Sbjct: 380 LEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 439

Query: 250 NGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 309
            G  ++   +L  M +N I P   ++  +I+++G+  L+++    F ++      P++ T
Sbjct: 440 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 499

Query: 310 FNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMV 369
           F+S++ ++ +  L +++E +  ++ D G   +  T  + I  Y       +A + +  M 
Sbjct: 500 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 559

Query: 370 NSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKA---- 429
            S  +    TL A+L VY    L  E    FE      + P    Y ++   Y K     
Sbjct: 560 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 619

Query: 430 DKKELLEKLLKN 438
           D  ELLE++L N
Sbjct: 620 DVNELLEEMLSN 626


HSP 3 Score: 109.4 bits (272), Expect = 1.2e-22
Identity = 72/319 (22.57%), Postives = 144/319 (45.14%), Query Frame = 1 

Query: 130 YSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYF 189
           Y+ L+S    +G    A  +F  M + G  PD + Y+ L+        K + L KV    
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF----GKLRRLEKVCDLL 309

Query: 190 EKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGK 249
            +M       P+I +YN+L  A+A++  + +   +F  +  +  + +  TY+ +++ +G+
Sbjct: 310 GEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 369

Query: 250 NGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 309
           +G   ++  +   MKS+   PD  ++N+LI+ +G+   F ++  +F  ++     P + T
Sbjct: 370 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 429

Query: 310 FNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMV 369
           +  +I   GK  L E A ++ + M      PS      +I  +G      +A   F+ M 
Sbjct: 430 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 489

Query: 370 NSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKE 429
             G    + T +++L  +   GL  E++ +     +  +  +  T+    +AY +  K E
Sbjct: 490 EVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFE 549

Query: 430 LLEKLLKNMDKAGIIPNKR 449
              K   +M+K+   P++R
Sbjct: 550 EAVKTYVDMEKSRCDPDER 563


HSP 4 Score: 84.7 bits (208), Expect = 3.3e-15
Identity = 88/370 (23.78%), Postives = 151/370 (40.81%), Query Frame = 1 

Query: 96  LLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRN 155
           +L E   K     E + VF  MQ        N  YS L+++ G+ G+      LF EM++
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN-TYSVLLNLFGQSGRYDDVRQLFLEMKS 381

Query: 156 SGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQA 215
           S   PD + YN LI        +     +V++ F  M   E  +P++ TY  +  A  + 
Sbjct: 382 SNTDPDAATYNILIEVF----GEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKG 441

Query: 216 AKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISF 275
              +    + + +  + +      Y GV++A+G+    +E  +    M      P I +F
Sbjct: 442 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 501

Query: 276 NLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKD 335
           + L+ S+ +  L  + E +   L+ S       TFN+ I  Y +    E+A + +  M+ 
Sbjct: 502 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 561

Query: 336 MGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLE 395
              DP   T E+++ +Y     V + RE F+ M  S     +     ML VY       +
Sbjct: 562 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 621

Query: 396 ADLLFESAGNMRVFPDSTTYKLLYKA-YTKADKKELLEKLLKNMDKAGIIPNKRFF---L 455
            + L E   + RV         + K  Y      +++E +L  ++  G     RF+   L
Sbjct: 622 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 681

Query: 456 DALGTIGSSQ 462
           DAL  +G  +
Sbjct: 682 DALWWLGQKE 685

[Close]
BLAST of Csa6G501290 vs. Swiss-Prot
Match: PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-33
Identity = 102/348 (29.31%), Postives = 167/348 (47.99%), Query Frame = 1 

Query: 106 KWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 165
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 166 NALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLF 225
            AL++A+  S     A     +  E+MK    C+P++ TY+IL ++F Q    D+V  L 
Sbjct: 189 TALVSAYSRSGRFDAAF----TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 248

Query: 226 KDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLLIDSYGK 285
            D+    +  +  TYN ++DAYGK     EME  L +M   +  KPD  + N  + ++G 
Sbjct: 249 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 308

Query: 286 KQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVT 345
               + ME  ++    S   P + TFN ++ +YGK+   +K   V   M+   Y  + VT
Sbjct: 309 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 368

Query: 346 CESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD-----LL 405
              +I  +G    + +   +F  M +        TL +++  Y   G   +AD     L 
Sbjct: 369 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKIGGVLR 428

Query: 406 FESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNK 448
           F    ++R+  D   +  L  AY + +K   ++ +L+ M+K G  P+K
Sbjct: 429 FIENSDIRL--DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467


HSP 2 Score: 119.0 bits (297), Expect = 1.6e-25
Identity = 74/263 (28.14%), Postives = 131/263 (49.81%), Query Frame = 1 

Query: 149 LFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNIL 208
           L S+MR  G RP+T  YN LI A+     KAK  V++ S   +M G + CKP+  T N  
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAY----GKAKMFVEMESTLIQMLGEDDCKPDSWTMNST 302

Query: 209 TRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQI 268
            RAF    +++ +   ++    S +  +I T+N ++D+YGK+GN K+M  ++  M+    
Sbjct: 303 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 362

Query: 269 KPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEE 328
              I+++N++ID++G+     +ME +F+ +   +  P+  T  S++  YG+A   +K   
Sbjct: 363 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 422

Query: 329 VFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYC 388
           V R +++       V    L+  YG  +  ++ + + + M   G +    T   M+  Y 
Sbjct: 423 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYR 482

Query: 389 INGLPL---EADLLFESAGNMRV 409
           I+G+     E   + ES G  +V
Sbjct: 483 ISGMTTHVKELHGVVESVGEAQV 501


HSP 3 Score: 80.5 bits (197), Expect = 6.1e-14
Identity = 54/241 (22.41%), Postives = 113/241 (46.89%), Query Frame = 1 

Query: 97  LFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNS 156
           L +  GK   ++E       M  +     D+   +  +   G  GQI M    + + ++S
Sbjct: 262 LIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSS 321

Query: 157 GCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAA 216
           G  P+   +N L+ ++  S +  K +  V+ Y +K          IVTYN++  AF +A 
Sbjct: 322 GIEPNIRTFNILLDSYGKSGNYKK-MSAVMEYMQKY----HYSWTIVTYNVVIDAFGRAG 381

Query: 217 KVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFN 276
            + Q+  LF+ +    +     T   ++ AYG+     ++  +L  ++++ I+ D++ FN
Sbjct: 382 DLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFN 441

Query: 277 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDM 336
            L+D+YG+ + F +M+ V + + +   +P   T+ +M+  Y  + +    +E+   ++ +
Sbjct: 442 CLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESV 497

Query: 337 G 338
           G
Sbjct: 502 G 497

[Close]
BLAST of Csa6G501290 vs. TrEMBL
Match: A0A0A0KGV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501290 PE=4 SV=1)

HSP 1 Score: 1050.4 bits (2715), Expect = 7.2e-304
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1 

Query: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60
           MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE
Sbjct: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60

Query: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120
           AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ
Sbjct: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120

Query: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180
           RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK
Sbjct: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180

Query: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240
           ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY
Sbjct: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240

Query: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300
           NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR
Sbjct: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300

Query: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360
           SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK
Sbjct: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360

Query: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420
           AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK
Sbjct: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420

Query: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480
           AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV
Sbjct: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480

Query: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 529
           EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA
Sbjct: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]
BLAST of Csa6G501290 vs. TrEMBL
Match: D7SW37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01360 PE=4 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 2.2e-196
Identity = 344/472 (72.88%), Postives = 397/472 (84.11%), Query Frame = 1 

Query: 2   PLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVV-CISTRPSRKFGVKTDRSE 61
           P S  L  S T +P+++    SR + P    +    ST VV C+STRP RK G K D+SE
Sbjct: 9   PSSLQLYSSSTLSPTFTLPS-SRFYKPTRLHLPPRPSTTVVSCVSTRPRRKPGPKPDKSE 68

Query: 62  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 121
            EELVR +++NF  + PL+ TL+KYV+V+RTEHCF LFEELGK DKWL+CLEVFRWMQKQ
Sbjct: 69  VEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWMQKQ 128

Query: 122 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 181
           RWYIADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALITAHLHS+DK+K
Sbjct: 129 RWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSK 188

Query: 182 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 241
           AL+K L YF+KMKGMERCKPNIVTYNIL RAFAQA  V+Q N LFK+L+ES+VS DI+T+
Sbjct: 189 ALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTF 248

Query: 242 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 301
           NGVMDAYGKNG IKEME +L+RMKSNQ KPDII+FN+LIDSYG++Q FDKMEQVFKSLLR
Sbjct: 249 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLR 308

Query: 302 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 361
           SKE+PTLPTFNSMITNYGKARL+EKAE VF+KM DMGY P+++T ESLIMMYG CDC+S+
Sbjct: 309 SKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISR 368

Query: 362 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 421
           AREIFD M+ S KE++VSTLNAML+VYC+NGLP+EADLL E A   R FP S+TYKLLYK
Sbjct: 369 AREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYK 428

Query: 422 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTG 473
           AYTKAD+KELLEKLLK MD  GI+PNKRFFL+ALG  GSS    E A + TG
Sbjct: 429 AYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTG 479

[Close]
BLAST of Csa6G501290 vs. TrEMBL
Match: M5X2C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004899mg PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 9.3e-195
Identity = 348/488 (71.31%), Postives = 405/488 (82.99%), Query Frame = 1 

Query: 1   MPLSFS--------LQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKF 60
           MPLS S        L F+  F+    +S L++ WLP     K+ V TR+ C+STRP RK 
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFS---QNSNLTQPWLPHVLLRKRPV-TRISCVSTRPKRKP 60

Query: 61  GVKTDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLE 120
           G KT+  +  E+VR ++R+FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WL+CLE
Sbjct: 61  GTKTEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLE 120

Query: 121 VFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAH 180
           VFRWMQKQRWY+ADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALI+AH
Sbjct: 121 VFRWMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAH 180

Query: 181 LHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESV 240
           L+SKDKAKAL K L YF+KMKGMERC+PNIVTYNIL RAFAQ+  V++VN+LFKDLDES+
Sbjct: 181 LNSKDKAKALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESI 240

Query: 241 VSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKME 300
            S DIYTYNGVMDAYGKNGNI+EME +L+ MKSNQ KPDII+FNLLIDSYGKKQ FDKME
Sbjct: 241 ASPDIYTYNGVMDAYGKNGNIREMESVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKME 300

Query: 301 QVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMY 360
           QVFKSL+RSKE+PTLPTFNSMI NYGKARL+EKAE+VF+KM DM Y PS++T ESLIMMY
Sbjct: 301 QVFKSLVRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMY 360

Query: 361 GHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDS 420
           G CD VSKARE+FD + +SGKE++VSTLNAMLDVYC+NGLP+EAD LF +  ++ V P+ 
Sbjct: 361 GFCDSVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNV 420

Query: 421 TTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTG 480
           +TYKLLYKAYTKA+ KELLEKLLK MDK GI+PNKRFFL+ALG   SS   P      TG
Sbjct: 421 STYKLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 480

[Close]
BLAST of Csa6G501290 vs. TrEMBL
Match: B9T1C7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0193840 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 4.3e-192
Identity = 343/468 (73.29%), Postives = 393/468 (83.97%), Query Frame = 1 

Query: 1   MPLSFS---LQFSP----TFTPSYSSSQLSRL-WLPLPSSIKKAVSTRVVCISTRPSRKF 60
           MPL+ S   LQ SP     FT ++       L W P     K    T + C+STRP +K 
Sbjct: 1   MPLNLSPHSLQLSPLGSSNFTNNFPQIHNPTLSWHPC----KNLRQTHITCVSTRPRKKR 60

Query: 61  GVKTDRSEAEELVRGIIRNFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECL 120
              ++ SE E+LVR ++R+FS DK PL++TLDKYVRV+RTEHCFLLFEELG+RDKWL+CL
Sbjct: 61  FPISEESETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQCL 120

Query: 121 EVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITA 180
           EVFRWMQKQRWYIAD+GVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPD+SVYNALITA
Sbjct: 121 EVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITA 180

Query: 181 HLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDES 240
           HLHSKDKAKAL+K L YFEKMKGM+RC+PN+VTYNIL RAFAQA  V+QVN LFKDLD+S
Sbjct: 181 HLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQS 240

Query: 241 VVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKM 300
           +VS DIYTYNGVMDAYGKNG I+EME +L+RMKSNQ KPDII+FNLLIDSYGKKQ FDKM
Sbjct: 241 IVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKM 300

Query: 301 EQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMM 360
           EQVFKSLL SKERPTLPTFNSMITNYGKAR +E AE V +KM  M Y P+++T ESLIMM
Sbjct: 301 EQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNFITYESLIMM 360

Query: 361 YGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPD 420
           YG CD VSKAREIFD M+ SGKEV+VSTLNAMLDVYC+NGLP+EADLLF++A N+ + PD
Sbjct: 361 YGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLPD 420

Query: 421 STTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGS 460
           STTYKLLYKAYTKA+ K+L++KLLK+MD+ GIIPNKRFFLDALG   S
Sbjct: 421 STTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGAFKS 464

[Close]
BLAST of Csa6G501290 vs. TrEMBL
Match: A0A061DQN3_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001217 PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 1.8e-190
Identity = 338/475 (71.16%), Postives = 390/475 (82.11%), Query Frame = 1 

Query: 6   SLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGV-KTDRSEAEEL 65
           SLQ  P F   +S   +S L  P   S +     R+ CI+TRP RK G  K +  EA EL
Sbjct: 9   SLQL-PAFHSPFSQIYISTLSQPCHLSTRPIA--RISCITTRPRRKTGSSKAEEPEALEL 68

Query: 66  VRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYI 125
           VR ++R+FSDKEPL+KTL++YVRV+R EHCFLLFEELGK DKWL+CLEVFRWMQKQRWYI
Sbjct: 69  VRVLMRSFSDKEPLVKTLNRYVRVVRCEHCFLLFEELGKTDKWLQCLEVFRWMQKQRWYI 128

Query: 126 ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVK 185
           ADNG+YSKLI++MGKKGQ RMAMWLFSEMRNSGCRPD SVYNALITAHLHS+DK+KAL K
Sbjct: 129 ADNGIYSKLITVMGKKGQTRMAMWLFSEMRNSGCRPDVSVYNALITAHLHSRDKSKALDK 188

Query: 186 VLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVM 245
            + YF KMKGMERCKPNIVTYNIL RAF+QA  VDQVN LFKDL ES+++ DIYTYNGVM
Sbjct: 189 AMGYFNKMKGMERCKPNIVTYNILLRAFSQARNVDQVNALFKDLAESIIAPDIYTYNGVM 248

Query: 246 DAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKER 305
           DAYGKNG I+EME +L+RMKSNQ KPD I+FN+LIDSYGKKQ FDKMEQVFKSLLRSK++
Sbjct: 249 DAYGKNGMIREMESVLSRMKSNQCKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRSKQK 308

Query: 306 PTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREI 365
           PTLPTFNSMI NYGKARL+EKAE VF+KM DM Y PS++T ESLIMMYG CDCVS+AREI
Sbjct: 309 PTLPTFNSMIINYGKARLKEKAEHVFKKMTDMKYVPSFITYESLIMMYGFCDCVSRAREI 368

Query: 366 FDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTK 425
           FDG+VNSGKE+RVSTLNAML+VYC NGL +EAD LFE+A  M V  DS+TYKLLYKAYTK
Sbjct: 369 FDGIVNSGKEMRVSTLNAMLEVYCRNGLHMEADRLFENAHKMGVIRDSSTYKLLYKAYTK 428

Query: 426 ADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSS 480
           A+ K+L++KL+K M+K GI+PNKRFFL+AL   GS    P+      G R   S+
Sbjct: 429 ANMKDLMQKLVKQMEKDGIVPNKRFFLEALEAFGSLPASPDSVSATIGDRPEKSA 480

[Close]
BLAST of Csa6G501290 vs. TAIR10
Match: AT4G39620.1 (AT4G39620.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 607.8 bits (1566), Expect = 6.2e-174
Identity = 303/466 (65.02%), Postives = 362/466 (77.68%), Query Frame = 1 

Query: 34  KKAVSTRVVCISTRPSRKFGVKTDRS-EAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTE 93
           +++  TR+ C +    RK   +     E   LVR ++   SD+EPL+KTLDKYV+V+R +
Sbjct: 39  RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98

Query: 94  HCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSE 153
           HCFLLFEELGK DKWL+CLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFSE
Sbjct: 99  HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158

Query: 154 MRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAF 213
           M+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218

Query: 214 AQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDI 273
           AQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAYGKNG IKEME +L RM+SN+ KPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278

Query: 274 ISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRK 333
           I+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338

Query: 334 MKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 393
           M DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAML+VYC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398

Query: 394 PLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLD 453
            +EAD LF +A   RV PD++TYK LYKAYTKAD KE ++ L+K M+K GI+PNKRFFL+
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458

Query: 454 ALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESN 499
           AL   GS           +GS N  S+     SSR+R  P+    N
Sbjct: 459 ALEVFGS-------RLPGSGSENRKST----RSSRSRDSPKGRGGN 493

[Close]
BLAST of Csa6G501290 vs. TAIR10
Match: AT3G06430.1 (AT3G06430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 3.1e-40
Identity = 97/352 (27.56%), Postives = 169/352 (48.01%), Query Frame = 1 

Query: 100 ELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 159
           +L  + +WL+ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 160 PDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVD 219
           P   +Y AL+ A+  S      +    S  +KMK   +C+P++ TY+ L +A   A++ D
Sbjct: 157 PTVELYTALLAAYTRSN----LIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 220 QVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLL 279
            V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 280 IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGY 339
           +  +G     D ME  ++        P   TFN +I +YGK R+ +K   V   M+ + +
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 340 DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADL 399
             +  T  ++I  +            FD M + G +    T   +++ Y   GL  +   
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 400 LFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFF 451
             + A    +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]
BLAST of Csa6G501290 vs. TAIR10
Match: AT3G53170.1 (AT3G53170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-38
Identity = 99/359 (27.58%), Postives = 169/359 (47.08%), Query Frame = 1 

Query: 99  EELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 158
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 116 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 175

Query: 159 RPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 218
           +P   VY +LI+ +     K++ L K  S  E MK +  CKP++ T+ +L     +  + 
Sbjct: 176 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 235

Query: 219 DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNL 278
           D V ++  ++    V     TYN ++D YGK G  +EME +LA M +     PD+ + N 
Sbjct: 236 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 295

Query: 279 LIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG 338
           +I SYG  +   KME  +        +P + TFN +I ++GKA + +K   V   M+   
Sbjct: 296 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 355

Query: 339 YDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD 398
           +  + VT   +I  +G    + K  ++F  M   G +    T  ++++ Y   GL ++ D
Sbjct: 356 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 415

Query: 399 LLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGT 457
            +     N  V  D+  +  +  AY +A     +++L   M++    P+K  F   + T
Sbjct: 416 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470

[Close]
BLAST of Csa6G501290 vs. TAIR10
Match: AT1G74850.1 (AT1G74850.1 plastid transcriptionally active 2)

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-35
Identity = 99/411 (24.09%), Postives = 188/411 (45.74%), Query Frame = 1 

Query: 54  VKTDRSEAEELVRGIIRNFSDKEP---LLKTLDKYVRVMRTEHCFLLFEELGKRDKWLEC 113
           V  ++ +    V  +I   S   P   + + LD +   +      L+F+E   R  W   
Sbjct: 65  VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124

Query: 114 LEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALIT 173
           L +F++MQ+Q W   +  +Y+ +IS++G++G +   + +F EM + G       Y ALI 
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184

Query: 174 AHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAA-KVDQVNTLFKDLD 233
           A+     +       L   ++MK  E+  P+I+TYN +  A A+     + +  LF ++ 
Sbjct: 185 AY----GRNGRYETSLELLDRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 244

Query: 234 ESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFD 293
              +  DI TYN ++ A    G   E E++   M    I PD+ +++ L++++GK +  +
Sbjct: 245 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 304

Query: 294 KMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLI 353
           K+  +   +      P + ++N ++  Y K+   ++A  VF +M+  G  P+  T   L+
Sbjct: 305 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 364

Query: 354 MMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVF 413
            ++G        R++F  M +S  +   +T N +++V+   G   E   LF       + 
Sbjct: 365 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 424

Query: 414 PDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS 461
           PD  TY+ +  A  K    E   K+L+ M    I+P+ + +   +   G +
Sbjct: 425 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470


HSP 2 Score: 122.5 bits (306), Expect = 7.9e-28
Identity = 84/312 (26.92%), Postives = 146/312 (46.79%), Query Frame = 1 

Query: 130 YSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYF 189
           Y+ L+    K G I+ AM +F +M+ +GC P+ + Y+ L    L+   ++     V   F
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL----LNLFGQSGRYDDVRQLF 379

Query: 190 EKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGK 249
            +MK      P+  TYNIL   F +     +V TLF D+ E  +  D+ TY G++ A GK
Sbjct: 380 LEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 439

Query: 250 NGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 309
            G  ++   +L  M +N I P   ++  +I+++G+  L+++    F ++      P++ T
Sbjct: 440 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 499

Query: 310 FNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMV 369
           F+S++ ++ +  L +++E +  ++ D G   +  T  + I  Y       +A + +  M 
Sbjct: 500 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 559

Query: 370 NSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKA---- 429
            S  +    TL A+L VY    L  E    FE      + P    Y ++   Y K     
Sbjct: 560 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 619

Query: 430 DKKELLEKLLKN 438
           D  ELLE++L N
Sbjct: 620 DVNELLEEMLSN 626


HSP 3 Score: 109.4 bits (272), Expect = 6.9e-24
Identity = 72/319 (22.57%), Postives = 144/319 (45.14%), Query Frame = 1 

Query: 130 YSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYF 189
           Y+ L+S    +G    A  +F  M + G  PD + Y+ L+        K + L KV    
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF----GKLRRLEKVCDLL 309

Query: 190 EKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGK 249
            +M       P+I +YN+L  A+A++  + +   +F  +  +  + +  TY+ +++ +G+
Sbjct: 310 GEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 369

Query: 250 NGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 309
           +G   ++  +   MKS+   PD  ++N+LI+ +G+   F ++  +F  ++     P + T
Sbjct: 370 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 429

Query: 310 FNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMV 369
           +  +I   GK  L E A ++ + M      PS      +I  +G      +A   F+ M 
Sbjct: 430 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 489

Query: 370 NSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKE 429
             G    + T +++L  +   GL  E++ +     +  +  +  T+    +AY +  K E
Sbjct: 490 EVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFE 549

Query: 430 LLEKLLKNMDKAGIIPNKR 449
              K   +M+K+   P++R
Sbjct: 550 EAVKTYVDMEKSRCDPDER 563


HSP 4 Score: 84.7 bits (208), Expect = 1.8e-16
Identity = 88/370 (23.78%), Postives = 151/370 (40.81%), Query Frame = 1 

Query: 96  LLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRN 155
           +L E   K     E + VF  MQ        N  YS L+++ G+ G+      LF EM++
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN-TYSVLLNLFGQSGRYDDVRQLFLEMKS 381

Query: 156 SGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQA 215
           S   PD + YN LI        +     +V++ F  M   E  +P++ TY  +  A  + 
Sbjct: 382 SNTDPDAATYNILIEVF----GEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKG 441

Query: 216 AKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISF 275
              +    + + +  + +      Y GV++A+G+    +E  +    M      P I +F
Sbjct: 442 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 501

Query: 276 NLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKD 335
           + L+ S+ +  L  + E +   L+ S       TFN+ I  Y +    E+A + +  M+ 
Sbjct: 502 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 561

Query: 336 MGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLE 395
              DP   T E+++ +Y     V + RE F+ M  S     +     ML VY       +
Sbjct: 562 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 621

Query: 396 ADLLFESAGNMRVFPDSTTYKLLYKA-YTKADKKELLEKLLKNMDKAGIIPNKRFF---L 455
            + L E   + RV         + K  Y      +++E +L  ++  G     RF+   L
Sbjct: 622 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 681

Query: 456 DALGTIGSSQ 462
           DAL  +G  +
Sbjct: 682 DALWWLGQKE 685

[Close]
BLAST of Csa6G501290 vs. TAIR10
Match: AT5G48730.1 (AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 8.7e-35
Identity = 102/348 (29.31%), Postives = 167/348 (47.99%), Query Frame = 1 

Query: 106 KWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 165
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 166 NALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLF 225
            AL++A+  S     A     +  E+MK    C+P++ TY+IL ++F Q    D+V  L 
Sbjct: 189 TALVSAYSRSGRFDAAF----TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 248

Query: 226 KDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLLIDSYGK 285
            D+    +  +  TYN ++DAYGK     EME  L +M   +  KPD  + N  + ++G 
Sbjct: 249 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 308

Query: 286 KQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVT 345
               + ME  ++    S   P + TFN ++ +YGK+   +K   V   M+   Y  + VT
Sbjct: 309 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 368

Query: 346 CESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD-----LL 405
              +I  +G    + +   +F  M +        TL +++  Y   G   +AD     L 
Sbjct: 369 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKIGGVLR 428

Query: 406 FESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNK 448
           F    ++R+  D   +  L  AY + +K   ++ +L+ M+K G  P+K
Sbjct: 429 FIENSDIRL--DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467


HSP 2 Score: 119.0 bits (297), Expect = 8.8e-27
Identity = 74/263 (28.14%), Postives = 131/263 (49.81%), Query Frame = 1 

Query: 149 LFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNIL 208
           L S+MR  G RP+T  YN LI A+     KAK  V++ S   +M G + CKP+  T N  
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAY----GKAKMFVEMESTLIQMLGEDDCKPDSWTMNST 302

Query: 209 TRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQI 268
            RAF    +++ +   ++    S +  +I T+N ++D+YGK+GN K+M  ++  M+    
Sbjct: 303 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 362

Query: 269 KPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEE 328
              I+++N++ID++G+     +ME +F+ +   +  P+  T  S++  YG+A   +K   
Sbjct: 363 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 422

Query: 329 VFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYC 388
           V R +++       V    L+  YG  +  ++ + + + M   G +    T   M+  Y 
Sbjct: 423 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYR 482

Query: 389 INGLPL---EADLLFESAGNMRV 409
           I+G+     E   + ES G  +V
Sbjct: 483 ISGMTTHVKELHGVVESVGEAQV 501


HSP 3 Score: 80.5 bits (197), Expect = 3.5e-15
Identity = 54/241 (22.41%), Postives = 113/241 (46.89%), Query Frame = 1 

Query: 97  LFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNS 156
           L +  GK   ++E       M  +     D+   +  +   G  GQI M    + + ++S
Sbjct: 262 LIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSS 321

Query: 157 GCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAA 216
           G  P+   +N L+ ++  S +  K +  V+ Y +K          IVTYN++  AF +A 
Sbjct: 322 GIEPNIRTFNILLDSYGKSGNYKK-MSAVMEYMQKY----HYSWTIVTYNVVIDAFGRAG 381

Query: 217 KVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFN 276
            + Q+  LF+ +    +     T   ++ AYG+     ++  +L  ++++ I+ D++ FN
Sbjct: 382 DLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFN 441

Query: 277 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDM 336
            L+D+YG+ + F +M+ V + + +   +P   T+ +M+  Y  + +    +E+   ++ +
Sbjct: 442 CLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESV 497

Query: 337 G 338
           G
Sbjct: 502 G 497

[Close]
BLAST of Csa6G501290 vs. NCBI nr
Match: gi|449451631|ref|XP_004143565.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis sativus])

HSP 1 Score: 1050.4 bits (2715), Expect = 1.0e-303
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1 

Query: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60
           MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE
Sbjct: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60

Query: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120
           AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ
Sbjct: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120

Query: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180
           RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK
Sbjct: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180

Query: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240
           ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY
Sbjct: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240

Query: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300
           NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR
Sbjct: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300

Query: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360
           SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK
Sbjct: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360

Query: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420
           AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK
Sbjct: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420

Query: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480
           AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV
Sbjct: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480

Query: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 529
           EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA
Sbjct: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]
BLAST of Csa6G501290 vs. NCBI nr
Match: gi|659080204|ref|XP_008440667.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis melo])

HSP 1 Score: 998.0 bits (2579), Expect = 6.1e-288
Identity = 503/531 (94.73%), Postives = 514/531 (96.80%), Query Frame = 1 

Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLS S QFSP FT SYSSS   QLSRLWLP+PSS+KK  STRVVC+STR SRK GVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 529
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of Csa6G501290 vs. NCBI nr
Match: gi|1009172443|ref|XP_015867273.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 700.3 bits (1806), Expect = 2.6e-198
Identity = 350/486 (72.02%), Postives = 405/486 (83.33%), Query Frame = 1 

Query: 1   MPLSFSLQFSPTFT-----PSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVK 60
           MPLS S       T     PS  +   ++ WLP    +++ + TR+ C+STRP RK   K
Sbjct: 1   MPLSLSSHSLHPSTFLFTRPSTQNYNFAKPWLPNSLLLERTI-TRISCVSTRPKRKSASK 60

Query: 61  TDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFR 120
            + SEAEELVR ++R+FSDKEPLLKTL+KYV+++RTEHCFLLFEELGK DKWL+CLEVFR
Sbjct: 61  IESSEAEELVRLLMRSFSDKEPLLKTLNKYVKIVRTEHCFLLFEELGKSDKWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWYIADNG+YSKLIS+MGK GQ RMAMWLFSEMRNSGCRPDTSVYNAL+TAHLHS
Sbjct: 121 WMQKQRWYIADNGIYSKLISVMGKNGQTRMAMWLFSEMRNSGCRPDTSVYNALMTAHLHS 180

Query: 181 KDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSA 240
           KDK KAL K L YFEKMKGMERCKPN+VTYNIL RA+AQA  V+QVN L KDLDES+VS 
Sbjct: 181 KDKTKALCKALGYFEKMKGMERCKPNVVTYNILLRAYAQARNVEQVNALLKDLDESIVSP 240

Query: 241 DIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME +L+RMKSNQ KPDII+FNLLIDSYGK+Q FDKMEQV+
Sbjct: 241 DIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKRQEFDKMEQVY 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 360
           KSLLRSKERPTLPTFNSMI NYGKARL+EKAE VF+KM DMGY PS++T ESLIMMYG C
Sbjct: 301 KSLLRSKERPTLPTFNSMIINYGKARLQEKAENVFKKMTDMGYAPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTY 420
           DCVSKA++IFD  V SGK+++VSTLNAMLDVYC+NGLP+EA+ LFESA ++ V PDS+TY
Sbjct: 361 DCVSKAQDIFDRWVESGKQLKVSTLNAMLDVYCMNGLPMEANKLFESANSIGVIPDSSTY 420

Query: 421 KLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPAR--TRTGS 480
           KLLYKAYTKA+ KELL KLLK+M + GI+PNK FFL+ALGT  SS   P+ A   T+  +
Sbjct: 421 KLLYKAYTKANMKELLGKLLKHMHRDGIVPNKWFFLEALGTFSSSPPSPDSANGTTKLLN 480

[Close]
BLAST of Csa6G501290 vs. NCBI nr
Match: gi|645241535|ref|XP_008227123.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Prunus mume])

HSP 1 Score: 694.1 bits (1790), Expect = 1.9e-196
Identity = 349/488 (71.52%), Postives = 407/488 (83.40%), Query Frame = 1 

Query: 1   MPLSFS--------LQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKF 60
           MPLS S        L F+  F+    +S L++ WLP    ++K   TR+ C+STRP RK 
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFS---QNSNLTQPWLP-HVLLRKRPMTRISCVSTRPKRKP 60

Query: 61  GVKTDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLE 120
           G KT+  +  E+VR ++R+FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WL+CLE
Sbjct: 61  GTKTEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLE 120

Query: 121 VFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAH 180
           VFRWMQKQRWY+ADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALI+AH
Sbjct: 121 VFRWMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAH 180

Query: 181 LHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESV 240
           L+SKDKA+AL K L YF+KMKGMERC+PNIVTYNIL RAFAQ+  V++VN+LFKDLDES+
Sbjct: 181 LNSKDKARALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESI 240

Query: 241 VSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKME 300
            S DIYTYNGVMDAYGKNGNI+EME +L+RMKSNQ KPDII+FNLLIDSYGKKQ FDKME
Sbjct: 241 ASPDIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKME 300

Query: 301 QVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMY 360
           QVFKSLLRSKE+PTLPTFNSMI NYGKARL+EKAE+VF+KM DM Y PS++T ESLIMMY
Sbjct: 301 QVFKSLLRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMY 360

Query: 361 GHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDS 420
           G CDCVSKARE+FD + +SGKE++VSTLNAMLDVYC+NGLP+EAD LF +  ++ V P+ 
Sbjct: 361 GFCDCVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNV 420

Query: 421 TTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTG 480
           +TYKLLYKAYTKA+ KELLEKLLK MDK GI+PNKRFFL+ALG   SS   P      TG
Sbjct: 421 STYKLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 480

[Close]
BLAST of Csa6G501290 vs. NCBI nr
Match: gi|225438599|ref|XP_002276540.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Vitis vinifera])

HSP 1 Score: 693.3 bits (1788), Expect = 3.2e-196
Identity = 344/472 (72.88%), Postives = 397/472 (84.11%), Query Frame = 1 

Query: 2   PLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVV-CISTRPSRKFGVKTDRSE 61
           P S  L  S T +P+++    SR + P    +    ST VV C+STRP RK G K D+SE
Sbjct: 9   PSSLQLYSSSTLSPTFTLPS-SRFYKPTRLHLPPRPSTTVVSCVSTRPRRKPGPKPDKSE 68

Query: 62  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 121
            EELVR +++NF  + PL+ TL+KYV+V+RTEHCF LFEELGK DKWL+CLEVFRWMQKQ
Sbjct: 69  VEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWMQKQ 128

Query: 122 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 181
           RWYIADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALITAHLHS+DK+K
Sbjct: 129 RWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSK 188

Query: 182 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 241
           AL+K L YF+KMKGMERCKPNIVTYNIL RAFAQA  V+Q N LFK+L+ES+VS DI+T+
Sbjct: 189 ALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTF 248

Query: 242 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 301
           NGVMDAYGKNG IKEME +L+RMKSNQ KPDII+FN+LIDSYG++Q FDKMEQVFKSLLR
Sbjct: 249 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLR 308

Query: 302 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 361
           SKE+PTLPTFNSMITNYGKARL+EKAE VF+KM DMGY P+++T ESLIMMYG CDC+S+
Sbjct: 309 SKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISR 368

Query: 362 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 421
           AREIFD M+ S KE++VSTLNAML+VYC+NGLP+EADLL E A   R FP S+TYKLLYK
Sbjct: 369 AREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYK 428

Query: 422 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTG 473
           AYTKAD+KELLEKLLK MD  GI+PNKRFFL+ALG  GSS    E A + TG
Sbjct: 429 AYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTG 479

The following BLAST results are available for this feature:
BLAST of Csa6G501290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP358_ARATH1.1e-17265.02Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
PP216_ARATH5.5e-3927.56Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
PP279_ARATH3.9e-3727.58Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN... [more]
PP124_ARATH9.1e-3424.09Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
PP424_ARATH1.6e-3329.31Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
BLAST of Csa6G501290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGV8_CUCSA7.2e-304100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501290 PE=4 SV=1[more]
D7SW37_VITVI2.2e-19672.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01360 PE=4 SV=... [more]
M5X2C9_PRUPE9.3e-19571.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004899mg PE=4 SV=1[more]
B9T1C7_RICCO4.3e-19273.29Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061DQN3_THECC1.8e-19071.16Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma c... [more]
BLAST of Csa6G501290 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39620.16.2e-17465.02 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G06430.13.1e-4027.56 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53170.12.2e-3827.58 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G74850.15.1e-3524.09 plastid transcriptionally active 2[more]
AT5G48730.18.7e-3529.31 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Csa6G501290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451631|ref|XP_004143565.1|1.0e-303100.00PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
gi|659080204|ref|XP_008440667.1|6.1e-28894.73PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
gi|1009172443|ref|XP_015867273.1|2.6e-19872.02PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-... [more]
gi|645241535|ref|XP_008227123.1|1.9e-19671.52PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-... [more]
gi|225438599|ref|XP_002276540.1|3.2e-19672.88PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU110582cucumber EST collection version 3.0transcribed_cluster
CU137516cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G501290.1Csa6G501290.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU137516CU137516transcribed_cluster
CU110582CU110582transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 309..337
score: 2.0E-6coord: 343..372
score: 0.0095coord: 379..401
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 149..212
score: 1.8E-9coord: 224..284
score: 6.5
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 238..272
score: 1.4E-8coord: 129..162
score: 2.8E-5coord: 309..341
score: 2.5E-7coord: 273..306
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 271..305
score: 10.128coord: 306..340
score: 11.575coord: 126..160
score: 11.444coord: 411..445
score: 9.35coord: 341..375
score: 7.826coord: 90..124
score: 5.382coord: 236..270
score: 11.663coord: 161..192
score: 5.36coord: 376..410
score: 7.87coord: 201..235
score: 8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 17..450
score: 5.1E
NoneNo IPR availablePANTHERPTHR24015:SF490SUBFAMILY NOT NAMEDcoord: 17..450
score: 5.1E