Cla014178 (gene) Watermelon (97103) v1

NameCla014178
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- F4JW43_ARATH); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr1 : 28855768 .. 28857624 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCTTTCATTTTCTCTTCAATTTTCTCCCACATTAACTCCATCTTCTTCTTCTTCACCAAATTCCCAACTCTCTCGACCATGGCTTCCACTCCCTTCGTCTCTAAGGAGAGCCGTTTCGACCCGAGTGGTCTGCATTTCAACTCGACCCAACAGGAAATCCGGGGCTCAGACCGACAGATCGGAGGCTGAAGAATTGGTTCGCGGTGTAGTAAGAAAGTTCAGCGACAAAGAACCATTGCTCAAGACATTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTTCGCTTTTCCTTCTTTTGAACTCTGAATTTCAGCCTCTGGGTATTGGATTTTCGAACTTGGATAGATGGGTAATGATTAAAATGCTCACAGGCAGAGTTGATTGAATTTGAAATTCAGGATATGGATTTTCAATTTATGAACATTACACACTTCCTGGTAAAATGTAGGAAATGAATGGAATTTGCTATCCTATTTGGGTATGGTGGGCTAAACAAGCAAAGAAATTGCAACTCTGCTATTATGTTTCATTTGATGTGTTTTCATTTTCAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCTCATCTTCATTCCAAGGACAAAGCTAAGGCTTTAGTTAAAGTCCTTGGGTACTTTGAGAAGATGAAGGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGACAAGTGGATCAAGTTAATACATTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGGGTGATGGATGCATATGGGAAAAATGGGATGATTAAAGAGATGGAATTGATGCTTGCTCACATGAAAAGCAATCAAGTTAAACCAGATATCATATCCTTTAACTTGTTGATCGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCAAAGGAGAGGCCAACGCTGCCTACTTTCAATTCGATGATCACGAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGAGATATGATCCAAGCCATGTGACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGTATGAATGATTTGCCCTTGGAAGCCGATTTGCTTTTTGAGAGGGCGAGTAATATGAGGGTGCTTCCGGATTCAACAACGTACAAGCTTCTGTATAAAGCTTACACGAAAGCTGATACGAAGGAACTTATGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACGGTTGGATCTTCACCAGAGAAACCAGAAACTGCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAACTAGAACAGGTCCAAGGAACTCAGAAAGTAGTATGGAGAAACCAATATCTTCAAGAAGTAGAACAGGTTCAAGAAACTTAGAAAGTAGTGTGGAAAACCATGCTCCAGAGTAA

mRNA sequence

ATGCCCCTTTCATTTTCTCTTCAATTTTCTCCCACATTAACTCCATCTTCTTCTTCTTCACCAAATTCCCAACTCTCTCGACCATGGCTTCCACTCCCTTCGTCTCTAAGGAGAGCCGTTTCGACCCGAGTGGTCTGCATTTCAACTCGACCCAACAGGAAATCCGGGGCTCAGACCGACAGATCGGAGGCTGAAGAATTGGTTCGCGGTGTAGTAAGAAAGTTCAGCGACAAAGAACCATTGCTCAAGACATTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCTCATCTTCATTCCAAGGACAAAGCTAAGGCTTTAGTTAAAGTCCTTGGGTACTTTGAGAAGATGAAGGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGACAAGTGGATCAAGTTAATACATTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGGGTGATGGATGCATATGGGAAAAATGGGATGATTAAAGAGATGGAATTGATGCTTGCTCACATGAAAAGCAATCAAGTTAAACCAGATATCATATCCTTTAACTTGTTGATCGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCAAAGGAGAGGCCAACGCTGCCTACTTTCAATTCGATGATCACGAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGAGATATGATCCAAGCCATGTGACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGTATGAATGATTTGCCCTTGGAAGCCGATTTGCTTTTTGAGAGGGCGAGTAATATGAGGGTGCTTCCGGATTCAACAACGTACAAGCTTCTGTATAAAGCTTACACGAAAGCTGATACGAAGGAACTTATGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACGGTTGGATCTTCACCAGAGAAACCAGAAACTGCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAACTAGAACAGGTCCAAGGAACTCAGAAAGTAGTATGGAGAAACCAATATCTTCAAGAAGTAGAACAGGTTCAAGAAACTTAGAAAGTAGTGTGGAAAACCATGCTCCAGAGTAA

Coding sequence (CDS)

ATGCCCCTTTCATTTTCTCTTCAATTTTCTCCCACATTAACTCCATCTTCTTCTTCTTCACCAAATTCCCAACTCTCTCGACCATGGCTTCCACTCCCTTCGTCTCTAAGGAGAGCCGTTTCGACCCGAGTGGTCTGCATTTCAACTCGACCCAACAGGAAATCCGGGGCTCAGACCGACAGATCGGAGGCTGAAGAATTGGTTCGCGGTGTAGTAAGAAAGTTCAGCGACAAAGAACCATTGCTCAAGACATTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCTCATCTTCATTCCAAGGACAAAGCTAAGGCTTTAGTTAAAGTCCTTGGGTACTTTGAGAAGATGAAGGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGACAAGTGGATCAAGTTAATACATTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGGGTGATGGATGCATATGGGAAAAATGGGATGATTAAAGAGATGGAATTGATGCTTGCTCACATGAAAAGCAATCAAGTTAAACCAGATATCATATCCTTTAACTTGTTGATCGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCAAAGGAGAGGCCAACGCTGCCTACTTTCAATTCGATGATCACGAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGAGATATGATCCAAGCCATGTGACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGTATGAATGATTTGCCCTTGGAAGCCGATTTGCTTTTTGAGAGGGCGAGTAATATGAGGGTGCTTCCGGATTCAACAACGTACAAGCTTCTGTATAAAGCTTACACGAAAGCTGATACGAAGGAACTTATGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACGGTTGGATCTTCACCAGAGAAACCAGAAACTGCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAACTAGAACAGGTCCAAGGAACTCAGAAAGTAGTATGGAGAAACCAATATCTTCAAGAAGTAGAACAGGTTCAAGAAACTTAGAAAGTAGTGTGGAAAACCATGCTCCAGAGTAA

Protein sequence

MPLSFSLQFSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQTDRSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSESSVEKPISSRTRTGPRNSESSMEKPISSRSRTGSRNLESSVENHAPE
BLAST of Cla014178 vs. Swiss-Prot
Match: PP358_ARATH (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.5e-174
Identity = 317/496 (63.91%), Postives = 380/496 (76.61%), Query Frame = 1

Query: 6   SLQFSPTLTPSSSSSPNSQLSRPWLPLPSSL---RRAVSTRVVCISTRPNRKSGAQTDRS 65
           SL+FS  +     SS   +    WL    +L   RR+  TR+ C +    RK  A+ + +
Sbjct: 10  SLRFSDFI-----SSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKL-AERESA 69

Query: 66  EAEE--LVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 125
           E E   LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWM
Sbjct: 70  ERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWM 129

Query: 126 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 185
           QKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYNALITAHLH++D
Sbjct: 130 QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRD 189

Query: 186 KAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADI 245
           KAKAL KV GY +KMKG+ERC+PN+VTYNIL RAFAQ+G+VDQVN LFKDLD S VS D+
Sbjct: 190 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 249

Query: 246 YTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKS 305
           YT+NGVMDAYGKNGMIKEME +L  M+SN+ KPDII+FN+LIDSYGKKQ F+KMEQ FKS
Sbjct: 250 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 309

Query: 306 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDC 365
           L+RSKE+PTLPTFNSMI NYGKAR+ +KAE VF+KM DM Y PS +T E +IMMYG+C  
Sbjct: 310 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 369

Query: 366 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKL 425
           VS+AREIF+ +  S + ++ STLNAML+VYC N L +EAD LF  AS  RV PD++TYK 
Sbjct: 370 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKF 429

Query: 426 LYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSE 485
           LYKAYTKAD KE ++ L+K M+K GI+PNKRFFL+AL   GS           +GS N +
Sbjct: 430 LYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-------RLPGSGSENRK 488

Query: 486 SSVEKPISSRTRTGPR 497
           S+     SSR+R  P+
Sbjct: 490 ST----RSSRSRDSPK 488

BLAST of Cla014178 vs. Swiss-Prot
Match: PP216_ARATH (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-39
Identity = 98/352 (27.84%), Postives = 167/352 (47.44%), Query Frame = 1

Query: 103 ELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 162
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSKDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVD 222
           P   +Y AL+ A+  S      +       +KMK   +C+P++ TY+ L +A   A Q D
Sbjct: 157 PTVELYTALLAAYTRS----NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 223 QVNTLFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLAHM-KSNQVKPDIISFNLL 282
            V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 283 IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRY 342
           +  +G     D ME  ++        P   TFN +I +YGK R+ +K   V   M+ + +
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 343 DPSHVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADL 402
             +  T  ++I  +            FD M + G +    T   +++ Y    L  +   
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 403 LFERASNMRVLPDSTTYKLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFF 454
             + A+   +  ++  Y  +  A  KAD    ME++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

BLAST of Cla014178 vs. Swiss-Prot
Match: PP279_ARATH (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.7e-38
Identity = 100/359 (27.86%), Postives = 171/359 (47.63%), Query Frame = 1

Query: 102 EELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 161
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 66  DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125

Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQV 221
           +P   VY +LI+ +     K++ L K     E MK +  CKP++ T+ +L     + G+ 
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185

Query: 222 DQVNTLFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLAHM-KSNQVKPDIISFNL 281
           D V ++  ++    V     TYN ++D YGK GM +EME +LA M +     PD+ + N 
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245

Query: 282 LIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMR 341
           +I SYG  +   KME  +        +P + TFN +I ++GKA + +K   V   M+   
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305

Query: 342 YDPSHVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEAD 401
           +  + VT   +I  +G    + K  ++F  M   G +    T  ++++ Y    L ++ D
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365

Query: 402 LLFERASNMRVLPDSTTYKLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGT 460
            +  +  N  V+ D+  +  +  AY +A     M++L   M++    P+K  F   + T
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 420

BLAST of Cla014178 vs. Swiss-Prot
Match: PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-33
Identity = 100/345 (28.99%), Postives = 162/345 (46.96%), Query Frame = 1

Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 168
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 169 NALITAHLHSK--DKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNT 228
            AL++A+  S   D A  L+      E+MK    C+P++ TY+IL ++F Q    D+V  
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 248

Query: 229 LFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLAHM-KSNQVKPDIISFNLLIDSY 288
           L  D+    +  +  TYN ++DAYGK  M  EME  L  M   +  KPD  + N  + ++
Sbjct: 249 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 308

Query: 289 GKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSH 348
           G     + ME  ++    S   P + TFN ++ +YGK+   +K   V   M+   Y  + 
Sbjct: 309 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 368

Query: 349 VTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFER 408
           VT   +I  +G    + +   +F  M +        TL +++  Y       +   +   
Sbjct: 369 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 428

Query: 409 ASNMRVLPDSTTYKLLYKAYTKADTKELMEKLLKNMDKAGIIPNK 451
             N  +  D   +  L  AY + +    M+ +L+ M+K G  P+K
Sbjct: 429 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467

BLAST of Cla014178 vs. Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-33
Identity = 96/400 (24.00%), Postives = 186/400 (46.50%), Query Frame = 1

Query: 68  VRGVVRKFSDKEP---LLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQR 127
           V  ++ K S   P   + + LD +   +      L+F+E   R  W + L +F++MQ+Q 
Sbjct: 76  VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135

Query: 128 WYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKA 187
           W   +  +Y+ +IS++G++G +   + +F EM + G       Y ALI A+     +   
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY----GRNGR 195

Query: 188 LVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAG-QVDQVNTLFKDLDESIVSADIYTY 247
               L   ++MK  E+  P+I+TYN +  A A+ G   + +  LF ++    +  DI TY
Sbjct: 196 YETSLELLDRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 255

Query: 248 NGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 307
           N ++ A    G+  E E++   M    + PD+ +++ L++++GK +  +K+  +   +  
Sbjct: 256 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 315

Query: 308 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDCVSK 367
               P + ++N ++  Y K+   ++A  VF +M+     P+  T   L+ ++G       
Sbjct: 316 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 375

Query: 368 AREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKLLYK 427
            R++F  M +S  +   +T N +++V+       E   LF       + PD  TY+ +  
Sbjct: 376 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 435

Query: 428 AYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSS 464
           A  K    E   K+L+ M    I+P+ + +   +   G +
Sbjct: 436 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470


HSP 2 Score: 127.9 bits (320), Expect = 3.3e-28
Identity = 84/312 (26.92%), Postives = 151/312 (48.40%), Query Frame = 1

Query: 133 YSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLGYF 192
           Y+ L+    K G I+ AM +F +M+ +GC P+ + Y+ L+  +L  +      V+ L  F
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL--NLFGQSGRYDDVRQL--F 379

Query: 193 EKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADIYTYNGVMDAYGK 252
            +MK      P+  TYNIL   F + G   +V TLF D+ E  +  D+ TY G++ A GK
Sbjct: 380 LEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 439

Query: 253 NGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 312
            G+ ++   +L +M +N + P   ++  +I+++G+  L+++    F ++      P++ T
Sbjct: 440 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 499

Query: 313 FNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDCVSKAREIFDGMV 372
           F+S++ ++ +  L +++E +  ++ D     +  T  + I  Y       +A + +  M 
Sbjct: 500 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 559

Query: 373 NSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKLLYKAYTKA---- 432
            S  +    TL A+L VY    L  E    FE      +LP    Y ++   Y K     
Sbjct: 560 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 619

Query: 433 DTKELMEKLLKN 441
           D  EL+E++L N
Sbjct: 620 DVNELLEEMLSN 626


HSP 3 Score: 109.8 bits (273), Expect = 9.4e-23
Identity = 72/319 (22.57%), Postives = 144/319 (45.14%), Query Frame = 1

Query: 133 YSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLGYF 192
           Y+ L+S    +G    A  +F  M + G  PD + Y+ L+        K + L KV    
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF----GKLRRLEKVCDLL 309

Query: 193 EKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADIYTYNGVMDAYGK 252
            +M       P+I +YN+L  A+A++G + +   +F  +  +  + +  TY+ +++ +G+
Sbjct: 310 GEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 369

Query: 253 NGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 312
           +G   ++  +   MKS+   PD  ++N+LI+ +G+   F ++  +F  ++     P + T
Sbjct: 370 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 429

Query: 313 FNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDCVSKAREIFDGMV 372
           +  +I   GK  L E A ++ + M      PS      +I  +G      +A   F+ M 
Sbjct: 430 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 489

Query: 373 NSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKLLYKAYTKADTKE 432
             G    + T +++L  +    L  E++ +  R  +  +  +  T+    +AY +    E
Sbjct: 490 EVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFE 549

Query: 433 LMEKLLKNMDKAGIIPNKR 452
              K   +M+K+   P++R
Sbjct: 550 EAVKTYVDMEKSRCDPDER 563


HSP 4 Score: 92.4 bits (228), Expect = 1.6e-17
Identity = 92/383 (24.02%), Postives = 158/383 (41.25%), Query Frame = 1

Query: 99  LLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRN 158
           +L E   K     + + VF  MQ        N  YS L+++ G+ G+      LF EM++
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN-TYSVLLNLFGQSGRYDDVRQLFLEMKS 381

Query: 159 SGCRPDTSVYNALITAHLHSKDKAKALVKVLGYFEKMKGM------ERCKPNIVTYNILT 218
           S   PD + YN LI                 GYF+++  +      E  +P++ TY  + 
Sbjct: 382 SNTDPDAATYNILIEVFGEG-----------GYFKEVVTLFHDMVEENIEPDMETYEGII 441

Query: 219 RAFAQAGQVDQVNTLFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVK 278
            A  + G  +    + + +  + +      Y GV++A+G+  + +E  +    M      
Sbjct: 442 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 501

Query: 279 PDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEV 338
           P I +F+ L+ S+ +  L  + E +   L+ S       TFN+ I  Y +    E+A + 
Sbjct: 502 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 561

Query: 339 FRKMKDMRYDPSHVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCM 398
           +  M+  R DP   T E+++ +Y     V + RE F+ M  S     +     ML VY  
Sbjct: 562 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 621

Query: 399 NDLPLEADLLFERASNMRVLPDSTTYKLLYKA-YTKADTKELMEKLLKNMDKAGIIPNKR 458
            +   + + L E   + RV         + K  Y      +++E +L  ++  G     R
Sbjct: 622 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIR 681

Query: 459 FF---LDALGTVGSSPEKPETAR 472
           F+   LDAL  +G   +K   AR
Sbjct: 682 FYNALLDALWWLG---QKERAAR 689

BLAST of Cla014178 vs. TrEMBL
Match: A0A0A0KGV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501290 PE=4 SV=1)

HSP 1 Score: 957.2 bits (2473), Expect = 8.2e-276
Identity = 479/527 (90.89%), Postives = 500/527 (94.88%), Query Frame = 1

Query: 1   MPLSFSLQFSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQTD 60
           MPLSFSLQFSPT TPS SSS   QLSR WLPLPSS+++AVSTRVVCISTRP+RK G +TD
Sbjct: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRG++R FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQA +VDQVNTLFKDLDES+VSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEMELMLA MKSNQ+KPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDM YDPS+VTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYC+N LPLEADLLFE A NMRV PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPE ARTRTGSRNS+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 SSVEKPISSRTRTGPRNSESSMEKPISSRSRTGSRNLESSVENHAPE 528
           SSVEK  SSRTR+GPRN ES+++KP SSR+RTGSRN ES VENHAPE
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPE 524

BLAST of Cla014178 vs. TrEMBL
Match: M5X2C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004899mg PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 2.0e-197
Identity = 348/477 (72.96%), Postives = 401/477 (84.07%), Query Frame = 1

Query: 1   MPLSFSLQ--FSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQ 60
           MPLS S       TL  +   S NS L++PWLP    LR+   TR+ C+STRP RK G +
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFSQNSNLTQPWLP-HVLLRKRPVTRISCVSTRPKRKPGTK 60

Query: 61  TDRSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFR 120
           T+  +  E+VR ++R FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WLQCLEVFR
Sbjct: 61  TEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWY+ADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALI+AHL+S
Sbjct: 121 WMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNS 180

Query: 181 KDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSA 240
           KDKAKAL K L YF+KMKGMERC+PNIVTYNIL RAFAQ+  V++VN+LFKDLDESI S 
Sbjct: 181 KDKAKALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME +L+HMKSNQ KPDII+FNLLIDSYGKKQ FDKMEQVF
Sbjct: 241 DIYTYNGVMDAYGKNGNIREMESVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVF 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHC 360
           KSL+RSKE+PTLPTFNSMI NYGKARL+EKAE+VF+KM DM+Y PS +T ESLIMMYG C
Sbjct: 301 KSLVRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTY 420
           D VSKARE+FD + +SGKE++VSTLNAMLDVYCMN LP+EAD LF   +++ V P+ +TY
Sbjct: 361 DSVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNVSTY 420

Query: 421 KLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTG 476
           KLLYKAYTKA+ KEL+EKLLK MDK GI+PNKRFFL+ALG   SSP  P +    TG
Sbjct: 421 KLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 476

BLAST of Cla014178 vs. TrEMBL
Match: D7SW37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01360 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 3.8e-196
Identity = 348/484 (71.90%), Postives = 402/484 (83.06%), Query Frame = 1

Query: 2   PLSFSLQFSPTLTPSSSSSPNSQLSRPW-LPLPSSLRRAVSTRVVCISTRPNRKSGAQTD 61
           P S  L  S TL+P+ +  P+S+  +P  L LP    R  +T V C+STRP RK G + D
Sbjct: 9   PSSLQLYSSSTLSPTFTL-PSSRFYKPTRLHLPP---RPSTTVVSCVSTRPRRKPGPKPD 68

Query: 62  RSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 121
           +SE EELVR +++ F  + PL+ TL+KYV+V+RTEHCF LFEELGK DKWLQCLEVFRWM
Sbjct: 69  KSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWM 128

Query: 122 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 181
           QKQRWYIADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALITAHLHS+D
Sbjct: 129 QKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRD 188

Query: 182 KAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADI 241
           K+KAL+K LGYF+KMKGMERCKPNIVTYNIL RAFAQA  V+Q N LFK+L+ESIVS DI
Sbjct: 189 KSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDI 248

Query: 242 YTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKS 301
           +T+NGVMDAYGKNGMIKEME +L+ MKSNQ KPDII+FN+LIDSYG++Q FDKMEQVFKS
Sbjct: 249 FTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKS 308

Query: 302 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDC 361
           LLRSKE+PTLPTFNSMITNYGKARL+EKAE VF+KM DM Y P+ +T ESLIMMYG CDC
Sbjct: 309 LLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDC 368

Query: 362 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKL 421
           +S+AREIFD M+ S KE++VSTLNAML+VYCMN LP+EADLL ERA   R  P S+TYKL
Sbjct: 369 ISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKL 428

Query: 422 LYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSE 481
           LYKAYTKAD KEL+EKLLK MD  GI+PNKRFFL+ALG  GSSP   E+A + TG     
Sbjct: 429 LYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPR 488

Query: 482 SSVE 485
           +S +
Sbjct: 489 NSAK 488

BLAST of Cla014178 vs. TrEMBL
Match: B9T1C7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0193840 PE=4 SV=1)

HSP 1 Score: 686.4 bits (1770), Expect = 2.7e-194
Identity = 350/471 (74.31%), Postives = 399/471 (84.71%), Query Frame = 1

Query: 1   MPLSFS---LQFSPTLTPSSSSSPNSQLSRP---WLPLPSSLRRAVSTRVVCISTRPNRK 60
           MPL+ S   LQ SP L  S+ ++   Q+  P   W P   +LR+   T + C+STRP +K
Sbjct: 1   MPLNLSPHSLQLSP-LGSSNFTNNFPQIHNPTLSWHPC-KNLRQ---THITCVSTRPRKK 60

Query: 61  SGAQTDRSEAEELVRGVVRKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQC 120
               ++ SE E+LVR V+R FS DK PL++TLDKYVRV+RTEHCFLLFEELG+RDKWLQC
Sbjct: 61  RFPISEESETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQC 120

Query: 121 LEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALIT 180
           LEVFRWMQKQRWYIAD+GVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPD+SVYNALIT
Sbjct: 121 LEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALIT 180

Query: 181 AHLHSKDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDE 240
           AHLHSKDKAKAL+K LGYFEKMKGM+RC+PN+VTYNIL RAFAQA  V+QVN LFKDLD+
Sbjct: 181 AHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQ 240

Query: 241 SIVSADIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDK 300
           SIVS DIYTYNGVMDAYGKNGMI+EME +L+ MKSNQ KPDII+FNLLIDSYGKKQ FDK
Sbjct: 241 SIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDK 300

Query: 301 MEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIM 360
           MEQVFKSLL SKERPTLPTFNSMITNYGKAR +E AE V +KM  M+Y P+ +T ESLIM
Sbjct: 301 MEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNFITYESLIM 360

Query: 361 MYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLP 420
           MYG CD VSKAREIFD M+ SGKEV+VSTLNAMLDVYC+N LP+EADLLF+ A N+ +LP
Sbjct: 361 MYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLP 420

Query: 421 DSTTYKLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSP 465
           DSTTYKLLYKAYTKA+ K+L++KLLK+MD+ GIIPNKRFFLDALG   S P
Sbjct: 421 DSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGAFKSLP 466

BLAST of Cla014178 vs. TrEMBL
Match: A0A061DQN3_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001217 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.3e-193
Identity = 338/464 (72.84%), Postives = 389/464 (83.84%), Query Frame = 1

Query: 20  SPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGA-QTDRSEAEELVRGVVRKFSDK 79
           SP SQ+    L  P  L      R+ CI+TRP RK+G+ + +  EA ELVR ++R FSDK
Sbjct: 17  SPFSQIYISTLSQPCHLSTRPIARISCITTRPRRKTGSSKAEEPEALELVRVLMRSFSDK 76

Query: 80  EPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLIS 139
           EPL+KTL++YVRV+R EHCFLLFEELGK DKWLQCLEVFRWMQKQRWYIADNG+YSKLI+
Sbjct: 77  EPLVKTLNRYVRVVRCEHCFLLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGIYSKLIT 136

Query: 140 IMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLGYFEKMKGM 199
           +MGKKGQ RMAMWLFSEMRNSGCRPD SVYNALITAHLHS+DK+KAL K +GYF KMKGM
Sbjct: 137 VMGKKGQTRMAMWLFSEMRNSGCRPDVSVYNALITAHLHSRDKSKALDKAMGYFNKMKGM 196

Query: 200 ERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADIYTYNGVMDAYGKNGMIKE 259
           ERCKPNIVTYNIL RAF+QA  VDQVN LFKDL ESI++ DIYTYNGVMDAYGKNGMI+E
Sbjct: 197 ERCKPNIVTYNILLRAFSQARNVDQVNALFKDLAESIIAPDIYTYNGVMDAYGKNGMIRE 256

Query: 260 MELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMIT 319
           ME +L+ MKSNQ KPD I+FN+LIDSYGKKQ FDKMEQVFKSLLRSK++PTLPTFNSMI 
Sbjct: 257 MESVLSRMKSNQCKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRSKQKPTLPTFNSMII 316

Query: 320 NYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEV 379
           NYGKARL+EKAE VF+KM DM+Y PS +T ESLIMMYG CDCVS+AREIFDG+VNSGKE+
Sbjct: 317 NYGKARLKEKAEHVFKKMTDMKYVPSFITYESLIMMYGFCDCVSRAREIFDGIVNSGKEM 376

Query: 380 RVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKLLYKAYTKADTKELMEKLL 439
           RVSTLNAML+VYC N L +EAD LFE A  M V+ DS+TYKLLYKAYTKA+ K+LM+KL+
Sbjct: 377 RVSTLNAMLEVYCRNGLHMEADRLFENAHKMGVIRDSSTYKLLYKAYTKANMKDLMQKLV 436

Query: 440 KNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSESS 483
           K M+K GI+PNKRFFL+AL   GS P  P++     G R  +S+
Sbjct: 437 KQMEKDGIVPNKRFFLEALEAFGSLPASPDSVSATIGDRPEKSA 480

BLAST of Cla014178 vs. NCBI nr
Match: gi|449451631|ref|XP_004143565.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis sativus])

HSP 1 Score: 957.2 bits (2473), Expect = 1.2e-275
Identity = 479/527 (90.89%), Postives = 500/527 (94.88%), Query Frame = 1

Query: 1   MPLSFSLQFSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQTD 60
           MPLSFSLQFSPT TPS SSS   QLSR WLPLPSS+++AVSTRVVCISTRP+RK G +TD
Sbjct: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRG++R FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQA +VDQVNTLFKDLDES+VSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEMELMLA MKSNQ+KPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDM YDPS+VTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYC+N LPLEADLLFE A NMRV PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPE ARTRTGSRNS+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 SSVEKPISSRTRTGPRNSESSMEKPISSRSRTGSRNLESSVENHAPE 528
           SSVEK  SSRTR+GPRN ES+++KP SSR+RTGSRN ES VENHAPE
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPE 524

BLAST of Cla014178 vs. NCBI nr
Match: gi|659080204|ref|XP_008440667.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis melo])

HSP 1 Score: 948.3 bits (2450), Expect = 5.5e-273
Identity = 472/527 (89.56%), Postives = 497/527 (94.31%), Query Frame = 1

Query: 1   MPLSFSLQFSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQTD 60
           MPLS S QFSP  T S SSS  SQLSR WLP+PSSL++  STRVVC+STR +RKSG +TD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRG+++KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQA +VDQVNTLFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEMELMLA MKSNQ+KPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDM YDPS+VTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYC+N LP EAD+LFE A NM+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPE ART+TGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKPISSRTRTGPRNSESSMEKPISSRSRTGSRNLESSVENHAPE 528
           SSVEK  SSRTR+GPRN ES+++KPISSR+RTGSRNLES VENHAPE
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPE 527

BLAST of Cla014178 vs. NCBI nr
Match: gi|1009172443|ref|XP_015867273.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 709.5 bits (1830), Expect = 4.3e-201
Identity = 354/479 (73.90%), Postives = 406/479 (84.76%), Query Frame = 1

Query: 1   MPLSFSLQFSPTLTPSS-----SSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKS 60
           MPLS S   S +L PS+      S+ N   ++PWLP    L R + TR+ C+STRP RKS
Sbjct: 1   MPLSLS---SHSLHPSTFLFTRPSTQNYNFAKPWLPNSLLLERTI-TRISCVSTRPKRKS 60

Query: 61  GAQTDRSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLE 120
            ++ + SEAEELVR ++R FSDKEPLLKTL+KYV+++RTEHCFLLFEELGK DKWLQCLE
Sbjct: 61  ASKIESSEAEELVRLLMRSFSDKEPLLKTLNKYVKIVRTEHCFLLFEELGKSDKWLQCLE 120

Query: 121 VFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAH 180
           VFRWMQKQRWYIADNG+YSKLIS+MGK GQ RMAMWLFSEMRNSGCRPDTSVYNAL+TAH
Sbjct: 121 VFRWMQKQRWYIADNGIYSKLISVMGKNGQTRMAMWLFSEMRNSGCRPDTSVYNALMTAH 180

Query: 181 LHSKDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESI 240
           LHSKDK KAL K LGYFEKMKGMERCKPN+VTYNIL RA+AQA  V+QVN L KDLDESI
Sbjct: 181 LHSKDKTKALCKALGYFEKMKGMERCKPNVVTYNILLRAYAQARNVEQVNALLKDLDESI 240

Query: 241 VSADIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKME 300
           VS DIYTYNGVMDAYGKNGMI+EME +L+ MKSNQ KPDII+FNLLIDSYGK+Q FDKME
Sbjct: 241 VSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKRQEFDKME 300

Query: 301 QVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMY 360
           QV+KSLLRSKERPTLPTFNSMI NYGKARL+EKAE VF+KM DM Y PS +T ESLIMMY
Sbjct: 301 QVYKSLLRSKERPTLPTFNSMIINYGKARLQEKAENVFKKMTDMGYAPSFITYESLIMMY 360

Query: 361 GHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDS 420
           G CDCVSKA++IFD  V SGK+++VSTLNAMLDVYCMN LP+EA+ LFE A+++ V+PDS
Sbjct: 361 GFCDCVSKAQDIFDRWVESGKQLKVSTLNAMLDVYCMNGLPMEANKLFESANSIGVIPDS 420

Query: 421 TTYKLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRT 475
           +TYKLLYKAYTKA+ KEL+ KLLK+M + GI+PNK FFL+ALGT  SSP  P++A   T
Sbjct: 421 STYKLLYKAYTKANMKELLGKLLKHMHRDGIVPNKWFFLEALGTFSSSPPSPDSANGTT 475

BLAST of Cla014178 vs. NCBI nr
Match: gi|645241535|ref|XP_008227123.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Prunus mume])

HSP 1 Score: 698.0 bits (1800), Expect = 1.3e-197
Identity = 348/477 (72.96%), Postives = 401/477 (84.07%), Query Frame = 1

Query: 1   MPLSFSLQ--FSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQ 60
           MPLS S       TL  +   S NS L++PWLP    LR+   TR+ C+STRP RK G +
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFSQNSNLTQPWLP-HVLLRKRPMTRISCVSTRPKRKPGTK 60

Query: 61  TDRSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFR 120
           T+  +  E+VR ++R FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WLQCLEVFR
Sbjct: 61  TEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWY+ADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALI+AHL+S
Sbjct: 121 WMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNS 180

Query: 181 KDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSA 240
           KDKA+AL K L YF+KMKGMERC+PNIVTYNIL RAFAQ+  V++VN+LFKDLDESI S 
Sbjct: 181 KDKARALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME +L+ MKSNQ KPDII+FNLLIDSYGKKQ FDKMEQVF
Sbjct: 241 DIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVF 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHC 360
           KSLLRSKE+PTLPTFNSMI NYGKARL+EKAE+VF+KM DM+Y PS +T ESLIMMYG C
Sbjct: 301 KSLLRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTY 420
           DCVSKARE+FD + +SGKE++VSTLNAMLDVYCMN LP+EAD LF   +++ V P+ +TY
Sbjct: 361 DCVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNVSTY 420

Query: 421 KLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTG 476
           KLLYKAYTKA+ KEL+EKLLK MDK GI+PNKRFFL+ALG   SSP  P +    TG
Sbjct: 421 KLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 476

BLAST of Cla014178 vs. NCBI nr
Match: gi|595871239|ref|XP_007212021.1| (hypothetical protein PRUPE_ppa004899mg [Prunus persica])

HSP 1 Score: 696.8 bits (1797), Expect = 2.9e-197
Identity = 348/477 (72.96%), Postives = 401/477 (84.07%), Query Frame = 1

Query: 1   MPLSFSLQ--FSPTLTPSSSSSPNSQLSRPWLPLPSSLRRAVSTRVVCISTRPNRKSGAQ 60
           MPLS S       TL  +   S NS L++PWLP    LR+   TR+ C+STRP RK G +
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFSQNSNLTQPWLP-HVLLRKRPVTRISCVSTRPKRKPGTK 60

Query: 61  TDRSEAEELVRGVVRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFR 120
           T+  +  E+VR ++R FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WLQCLEVFR
Sbjct: 61  TEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWY+ADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYNALI+AHL+S
Sbjct: 121 WMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNS 180

Query: 181 KDKAKALVKVLGYFEKMKGMERCKPNIVTYNILTRAFAQAGQVDQVNTLFKDLDESIVSA 240
           KDKAKAL K L YF+KMKGMERC+PNIVTYNIL RAFAQ+  V++VN+LFKDLDESI S 
Sbjct: 181 KDKAKALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMELMLAHMKSNQVKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME +L+HMKSNQ KPDII+FNLLIDSYGKKQ FDKMEQVF
Sbjct: 241 DIYTYNGVMDAYGKNGNIREMESVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVF 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMRYDPSHVTCESLIMMYGHC 360
           KSL+RSKE+PTLPTFNSMI NYGKARL+EKAE+VF+KM DM+Y PS +T ESLIMMYG C
Sbjct: 301 KSLVRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCMNDLPLEADLLFERASNMRVLPDSTTY 420
           D VSKARE+FD + +SGKE++VSTLNAMLDVYCMN LP+EAD LF   +++ V P+ +TY
Sbjct: 361 DSVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNVSTY 420

Query: 421 KLLYKAYTKADTKELMEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPETARTRTG 476
           KLLYKAYTKA+ KEL+EKLLK MDK GI+PNKRFFL+ALG   SSP  P +    TG
Sbjct: 421 KLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 476

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP358_ARATH1.5e-17463.91Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
PP216_ARATH1.9e-3927.84Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
PP279_ARATH2.7e-3827.86Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN... [more]
PP424_ARATH1.2e-3328.99Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
PP124_ARATH3.4e-3324.00Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KGV8_CUCSA8.2e-27690.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501290 PE=4 SV=1[more]
M5X2C9_PRUPE2.0e-19772.96Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004899mg PE=4 SV=1[more]
D7SW37_VITVI3.8e-19671.90Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01360 PE=4 SV=... [more]
B9T1C7_RICCO2.7e-19474.31Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061DQN3_THECC1.3e-19372.84Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma c... [more]
Match NameE-valueIdentityDescription
gi|449451631|ref|XP_004143565.1|1.2e-27590.89PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
gi|659080204|ref|XP_008440667.1|5.5e-27389.56PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
gi|1009172443|ref|XP_015867273.1|4.3e-20173.90PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-... [more]
gi|645241535|ref|XP_008227123.1|1.3e-19772.96PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-... [more]
gi|595871239|ref|XP_007212021.1|2.9e-19772.96hypothetical protein PRUPE_ppa004899mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014178Cla014178.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 346..375
score: 0.0095coord: 382..405
score: 0.016coord: 312..339
score: 9.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 239..286
score: 3.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 152..215
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 241..275
score: 6.7E-8coord: 206..237
score: 0.002coord: 276..309
score: 1.7E-5coord: 132..165
score: 2.8E-5coord: 312..344
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 93..127
score: 5.009coord: 309..343
score: 10.775coord: 239..273
score: 11.345coord: 414..448
score: 9.098coord: 379..413
score: 7.947coord: 344..378
score: 7.969coord: 204..238
score: 9.12coord: 164..195
score: 5.196coord: 274..308
score: 10.128coord: 129..163
score: 11
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 17..453
score: 1.9E
NoneNo IPR availablePANTHERPTHR24015:SF490SUBFAMILY NOT NAMEDcoord: 17..453
score: 1.9E

The following gene(s) are paralogous to this gene:

None