CmoCh03G008170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G008170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr03 : 6585334 .. 6587394 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAATCCACCCCTTTCTTCATCGGATTTTGGATTTTGGATTTTGGACTCTGCTATCCTTTCCCCGTCGAAGACGAAGCTTAACATACAATGCCCCTTTCTTTTTCTCTGCAATTTTCTCCCTCATTTACTCCATTTTCTTCTTCTTCCCGAAACTTCCAACTCTCTCAGACATGGCTTCCACTCCCATTGTCTCTGAGGAGGGCCGTTTCGACCCGAGTGGTCTGTATTTCAACTCGACCCAATAGGAAATCTGCGGCTAAGACCGACAGGTCGGAGACTGAAGAACTGGTTCGCGGTGTAATCAGAAAGTTCAGCGATAAAGAACCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTCTTTGAGGAATTAGGGAAAAAGGATAAATGGCTTCAGTGCCTCGAGGTTCGCTCTTCTTCTTTTGAACTCTGAATTAGGGCCTCTGGGTGTTGATTTTTCTAACTTCTTTAGCTGCCTGTTAAGTGTTGATTTTTCTAATTTGTAATGTAGTTCAAGCTCTATTTGGCATGGATGAACAATGGAGAGCCTAAATTTTTCTGGGTGAAGCTAAAAAGGCAAAGAAATTCTTATTGATGTATTTCATTTTCAGGTCTTCAGATGGATGCAGAAACAGCGCTGGTATATTGCTGACAATGGGGTTTATTCTAAACTGATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATATGGCTCTTTTCCGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTCTACAATGCACTTATCACAGCGCACCTTCATTCTAAGGACAAAGCCAAGGCTTTGGTTAAAGTCCTTTGGTACTTTGAGAAGATGAAGGGAATGGAACGGTGTAAGCCAAATGTTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATGCCTTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATCAAAGAGATGGAAACGATGCTTGCTCGCATGAAAAGTAATGAAATCAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGTTTATTACGATCGAAGGAGAGGCCGACACTACCTACATTCAATTCGATGATCACAAACTACGGGAAGGCACGACTTAGAGAGAGAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATATGATCCAAGCTATGTCACTTGTGAAAGTCTAATAATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGCGGTGAGAGTCTCGACCCTCAACGCCATGCTTGATGTTTACTGCATGAATGGTTTGCCCATGGAAGCCGATTTGCTTTTCGAGAGTGCGAGTAGTATGAAGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGCGAAGGAACTTGTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACCAGAACCTGCAAGAACTGGAACAGGTTCAAGACACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAAATAGAAGAGGTTCAAGAAAATTGGAAAGTAGTGTGAAAAACCATGCTCCAGAGTTAGGCTTAGCTTAAGAAGTTATGTAGTCGGTCTTCATTCATAAGGAGCTTCTTGACTTTCCCCATTGGAGAAAGGTGCTGCAGTTCAAAGAAAGATACAGGAATGTGGAGTGTTAACAAGAAGTCAAAATTTTGTATATATGCTCATATCTTGTCTCATAAAATCGGGATATATAAATTAATTCAGTGATCATCAGGGAGCCTTCTCTCCCATCTGATCTATTTTTTTGCTTCATAAGCTA

mRNA sequence

ACAAAATCCACCCCTTTCTTCATCGGATTTTGGATTTTGGATTTTGGACTCTGCTATCCTTTCCCCGTCGAAGACGAAGCTTAACATACAATGCCCCTTTCTTTTTCTCTGCAATTTTCTCCCTCATTTACTCCATTTTCTTCTTCTTCCCGAAACTTCCAACTCTCTCAGACATGGCTTCCACTCCCATTGTCTCTGAGGAGGGCCGTTTCGACCCGAGTGGTCTGTATTTCAACTCGACCCAATAGGAAATCTGCGGCTAAGACCGACAGGTCGGAGACTGAAGAACTGGTTCGCGGTGTAATCAGAAAGTTCAGCGATAAAGAACCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTCTTTGAGGAATTAGGGAAAAAGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAGCGCTGGTATATTGCTGACAATGGGGTTTATTCTAAACTGATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATATGGCTCTTTTCCGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTCTACAATGCACTTATCACAGCGCACCTTCATTCTAAGGACAAAGCCAAGGCTTTGGTTAAAGTCCTTTGGTACTTTGAGAAGATGAAGGGAATGGAACGGTGTAAGCCAAATGTTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATGCCTTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATCAAAGAGATGGAAACGATGCTTGCTCGCATGAAAAGTAATGAAATCAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGTTTATTACGATCGAAGGAGAGGCCGACACTACCTACATTCAATTCGATGATCACAAACTACGGGAAGGCACGACTTAGAGAGAGAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATATGATCCAAGCTATGTCACTTGTGAAAGTCTAATAATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGCGGTGAGAGTCTCGACCCTCAACGCCATGCTTGATGTTTACTGCATGAATGGTTTGCCCATGGAAGCCGATTTGCTTTTCGAGAGTGCGAGTAGTATGAAGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGCGAAGGAACTTGTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACCAGAACCTGCAAGAACTGGAACAGGTTCAAGACACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAAATAGAAGAGGTTCAAGAAAATTGGAAAGTAGTGTGAAAAACCATGCTCCAGAGTTAGGCTTAGCTTAAGAAGTTATGTAGTCGGTCTTCATTCATAAGGAGCTTCTTGACTTTCCCCATTGGAGAAAGGTGCTGCAGTTCAAAGAAAGATACAGGAATGTGGAGTGTTAACAAGAAGTCAAAATTTTGTATATATGCTCATATCTTGTCTCATAAAATCGGGATATATAAATTAATTCAGTGATCATCAGGGAGCCTTCTCTCCCATCTGATCTATTTTTTTGCTTCATAAGCTA

Coding sequence (CDS)

ATGCCCCTTTCTTTTTCTCTGCAATTTTCTCCCTCATTTACTCCATTTTCTTCTTCTTCCCGAAACTTCCAACTCTCTCAGACATGGCTTCCACTCCCATTGTCTCTGAGGAGGGCCGTTTCGACCCGAGTGGTCTGTATTTCAACTCGACCCAATAGGAAATCTGCGGCTAAGACCGACAGGTCGGAGACTGAAGAACTGGTTCGCGGTGTAATCAGAAAGTTCAGCGATAAAGAACCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTCTTTGAGGAATTAGGGAAAAAGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAGCGCTGGTATATTGCTGACAATGGGGTTTATTCTAAACTGATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATATGGCTCTTTTCCGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTCTACAATGCACTTATCACAGCGCACCTTCATTCTAAGGACAAAGCCAAGGCTTTGGTTAAAGTCCTTTGGTACTTTGAGAAGATGAAGGGAATGGAACGGTGTAAGCCAAATGTTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATGCCTTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATCAAAGAGATGGAAACGATGCTTGCTCGCATGAAAAGTAATGAAATCAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGTTTATTACGATCGAAGGAGAGGCCGACACTACCTACATTCAATTCGATGATCACAAACTACGGGAAGGCACGACTTAGAGAGAGAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATATGATCCAAGCTATGTCACTTGTGAAAGTCTAATAATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGCGGTGAGAGTCTCGACCCTCAACGCCATGCTTGATGTTTACTGCATGAATGGTTTGCCCATGGAAGCCGATTTGCTTTTCGAGAGTGCGAGTAGTATGAAGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGCGAAGGAACTTGTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACCAGAACCTGCAAGAACTGGAACAGGTTCAAGACACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAAATAGAAGAGGTTCAAGAAAATTGGAAAGTAGTGTGAAAAACCATGCTCCAGAGTTAGGCTTAGCTTAA
Homology
[Close]
BLAST of CmoCh03G008170 vs. Swiss-Prot
Match: PP358_ARATH (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 6.7e-175
Identity = 320/502 (63.75%), Postives = 387/502 (77.09%), Query Frame = 1 

Query: 10  SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSAAKTDRS-E 69
           SPS   FS   SS   +    WL   ++L   RR+  TR+ C +    RK A +     E
Sbjct: 7   SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERE 66

Query: 70  TEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQ 129
              LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQ
Sbjct: 67  NRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQ 126

Query: 130 RWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 189
           RWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKAK
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186

Query: 190 ALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYTY 249
           AL KV  Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S VS D+YT+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246

Query: 250 NGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 309
           NGVMDAYGKNGMIKEME +L RM+SNE KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+R
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306

Query: 310 SKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 369
           SKE+PTLPTFNSMI NYGKAR+ ++AE VF+KM DM Y PS++T E +IMMYG+C  VS+
Sbjct: 307 SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366

Query: 370 AREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYK 429
           AREIF+ +  S + ++ STLNAML+VYC NGL +EAD LF +AS+ +V PD++TYK LYK
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426

Query: 430 AYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESSV 489
           AYTKAD KE V+ L+K M+K GI+PNKRFFL+AL   GS         +G+ +R S  S 
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-----RLPGSGSENRKSTRSS 486

Query: 490 EKPISSRNRRGSRKLESSVKNH 506
               S + R G++  E   K++
Sbjct: 487 RSRDSPKGRGGNQLTEFQDKDN 503

[Close]
BLAST of CmoCh03G008170 vs. Swiss-Prot
Match: PP216_ARATH (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 100/354 (28.25%), Postives = 174/354 (49.15%), Query Frame = 1 

Query: 103 ELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCR 162
           +L  K +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P+V TY+ L +A   A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLARM-KSNEIKPDIISFN 282
            D V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276

Query: 283 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDM 342
           +++  +G     D ME  ++        P   TFN +I +YGK R+ ++   V   M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336

Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEA 402
            +  +  T  ++I  +            FD M + G      T   +++ Y   GL  + 
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396

Query: 403 DLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFF 454
               + A+  ++  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]
BLAST of CmoCh03G008170 vs. Swiss-Prot
Match: PP279_ARATH (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-37
Identity = 108/397 (27.20%), Postives = 188/397 (47.36%), Query Frame = 1 

Query: 64  TEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQ 123
           T+  V+G+ RK ++ E  L    K V            +E  K+++W   L++F  ++KQ
Sbjct: 37  TDAAVKGIERK-ANSEKYLTLWPKAV--------LEALDEAIKENRWQSALKIFNLLRKQ 96

Query: 124 RWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 183
            WY      Y+KL  ++G   Q   A  LF  M + G +P   VY +LI+ +     K++
Sbjct: 97  HWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVY----GKSE 156

Query: 184 ALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYTY 243
            L K     E MK +  CKP+V T+ +L     + G+ D V ++  ++    V     TY
Sbjct: 157 LLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTY 216

Query: 244 NGVMDAYGKNGMIKEMETMLARM-KSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLL 303
           N ++D YGK GM +EME++LA M +  +  PD+ + N +I SYG  +   KME  +    
Sbjct: 217 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 276

Query: 304 RSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVS 363
               +P + TFN +I ++GKA + ++   V   M+   +  + VT   +I  +G    + 
Sbjct: 277 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 336

Query: 364 KAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLY 423
           K  ++F  M   G      T  ++++ Y   GL ++ D +     +  V  D+  +  + 
Sbjct: 337 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 396

Query: 424 KAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGT 460
            AY +A     +++L   M++    P+K  F   + T
Sbjct: 397 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 420

[Close]
BLAST of CmoCh03G008170 vs. Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.8e-34
Identity = 98/400 (24.50%), Postives = 189/400 (47.25%), Query Frame = 1 

Query: 68  VRGVIRKFSDKEP---LLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQR 127
           V  +I K S   P   + + LD +   +      L+F+E   +  W + L +F++MQ+Q 
Sbjct: 76  VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135

Query: 128 WYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKA 187
           W   +  +Y+ +IS++G++G +   + +F EM + G       Y ALI A+  +     +
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195

Query: 188 LVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAG-KVDQVNALFKDLDESIVSADIYTY 247
           L  +    ++MK  E+  P+++TYN +  A A+ G   + +  LF ++    +  DI TY
Sbjct: 196 LELL----DRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 255

Query: 248 NGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 307
           N ++ A    G+  E E +   M    I PD+ +++ L++++GK +  +K+  +   +  
Sbjct: 256 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 315

Query: 308 SKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 367
               P + ++N ++  Y K+   + A  VF +M+  G  P+  T   L+ ++G       
Sbjct: 316 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 375

Query: 368 AREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYK 427
            R++F  M +S      +T N +++V+   G   E   LF       + PD  TY+ +  
Sbjct: 376 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 435

Query: 428 AYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSS 464
           A  K    E   K+L+ M    I+P+ + +   +   G +
Sbjct: 436 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470

[Close]
BLAST of CmoCh03G008170 vs. Swiss-Prot
Match: PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-33
Identity = 103/350 (29.43%), Postives = 173/350 (49.43%), Query Frame = 1 

Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVY 168
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNA 228
            AL++A+  S   D A  L+      E+MK    C+P+V TY+IL ++F Q    D+V  
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 248

Query: 229 LFKDLDESIVSADIYTYNGVMDAYGKNGMIKEME-TMLARMKSNEIKPDIISFNLLIDSY 288
           L  D+    +  +  TYN ++DAYGK  M  EME T++  +  ++ KPD  + N  + ++
Sbjct: 249 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 308

Query: 289 GKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSY 348
           G     + ME  ++    S   P + TFN ++ +YGK+   ++   V   M+   Y  + 
Sbjct: 309 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 368

Query: 349 VTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEAD----- 408
           VT   +I  +G    + +   +F  M +        TL +++  Y   G   +AD     
Sbjct: 369 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKIGGV 428

Query: 409 LLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNK 451
           L F   S +++  D   +  L  AY + +    ++ +L+ M+K G  P+K
Sbjct: 429 LRFIENSDIRL--DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467

[Close]
BLAST of CmoCh03G008170 vs. TrEMBL
Match: A0A0A0KGV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501290 PE=4 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 6.8e-259
Identity = 461/531 (86.82%), Postives = 484/531 (91.15%), Query Frame = 1 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQFSP+FTP  SSS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK   KTD
Sbjct: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSE EELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 SSVE-------------------KPISSRNRRGSRKLESSVKNHAPELGLA 513
           SSVE                   KP SSR R GSR  ES V+NHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]
BLAST of CmoCh03G008170 vs. TrEMBL
Match: M5X2C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004899mg PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 8.5e-193
Identity = 345/477 (72.33%), Postives = 401/477 (84.07%), Query Frame = 1 

Query: 1   MPLSFSLQ-FSPSFTPFSSS-SRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAK 60
           MPLS S     PS   F+   S+N  L+Q WLP  L  +R V TR+ C+STRP RK   K
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFSQNSNLTQPWLPHVLLRKRPV-TRISCVSTRPKRKPGTK 60

Query: 61  TDRSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFR 120
           T+  +  E+VR ++R FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WLQCLEVFR
Sbjct: 61  TEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWY+ADNGVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYNALI+AHL+S
Sbjct: 121 WMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNS 180

Query: 181 KDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSA 240
           KDKAKAL K L YF+KMKGMERC+PN+VTYNIL RAFAQ+  V++VN+LFKDLDESI S 
Sbjct: 181 KDKAKALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME++L+ MKSN+ KPDII+FNLLIDSYGKKQ FDKMEQVF
Sbjct: 241 DIYTYNGVMDAYGKNGNIREMESVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVF 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 360
           KSL+RSKE+PTLPTFNSMI NYGKARL+E+AE+VF+KM DM Y PS++T ESLIMMYG C
Sbjct: 301 KSLVRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTY 420
           D VSKARE+FD + +SGK ++VSTLNAMLDVYCMNGLP+EAD LF + +S+ V P+ +TY
Sbjct: 361 DSVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNVSTY 420

Query: 421 KLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTG 476
           KLLYKAYTKA+ KEL+EKLLK MDK GI+PNKRFFL+ALG   SSP  P      TG
Sbjct: 421 KLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 476

[Close]
BLAST of CmoCh03G008170 vs. TrEMBL
Match: D7SW37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01360 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.4e-192
Identity = 344/484 (71.07%), Postives = 402/484 (83.06%), Query Frame = 1 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           + L  S   SP+FT    SSR ++ ++  LP      R  +T V C+STRP RK   K D
Sbjct: 12  LQLYSSSTLSPTFT--LPSSRFYKPTRLHLP-----PRPSTTVVSCVSTRPRRKPGPKPD 71

Query: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           +SE EELVR +++ F  + PL+ TL+KYV+V+RTEHCF LFEELGK DKWLQCLEVFRWM
Sbjct: 72  KSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWM 131

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYNALITAHLHS+D
Sbjct: 132 QKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRD 191

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
           K+KAL+K L YF+KMKGMERCKPN+VTYNIL RAFAQA  V+Q NALFK+L+ESIVS DI
Sbjct: 192 KSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDI 251

Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           +T+NGVMDAYGKNGMIKEME++L+RMKSN+ KPDII+FN+LIDSYG++Q FDKMEQVFKS
Sbjct: 252 FTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKS 311

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKE+PTLPTFNSMITNYGKARL+E+AE VF+KM DMGY P+++T ESLIMMYG CDC
Sbjct: 312 LLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDC 371

Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           +S+AREIFD M+ S K ++VSTLNAML+VYCMNGLPMEADLL E A   + FP S+TYKL
Sbjct: 372 ISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKL 431

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKAD KEL+EKLLK MD  GI+PNKRFFL+ALG  GSSP   E A + TG     
Sbjct: 432 LYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPR 488

Query: 481 SSVE 485
           +S +
Sbjct: 492 NSAK 488

[Close]
BLAST of CmoCh03G008170 vs. TrEMBL
Match: B9T1C7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0193840 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 5.5e-192
Identity = 351/472 (74.36%), Postives = 400/472 (84.75%), Query Frame = 1 

Query: 1   MPLSFS---LQFSP----SFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNR 60
           MPL+ S   LQ SP    +FT       N  LS  W P   +LR+   T + C+STRP +
Sbjct: 1   MPLNLSPHSLQLSPLGSSNFTNNFPQIHNPTLS--WHPCK-NLRQ---THITCVSTRPRK 60

Query: 61  KSAAKTDRSETEELVRGVIRKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQ 120
           K    ++ SETE+LVR V+R FS DK PL++TLDKYVRV+RTEHCFLLFEELG++DKWLQ
Sbjct: 61  KRFPISEESETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQ 120

Query: 121 CLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALI 180
           CLEVFRWMQKQRWYIAD+GVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPD+SVYNALI
Sbjct: 121 CLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALI 180

Query: 181 TAHLHSKDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLD 240
           TAHLHSKDKAKAL+K L YFEKMKGM+RC+PNVVTYNIL RAFAQA  V+QVNALFKDLD
Sbjct: 181 TAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLD 240

Query: 241 ESIVSADIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFD 300
           +SIVS DIYTYNGVMDAYGKNGMI+EME++L+RMKSN+ KPDII+FNLLIDSYGKKQ FD
Sbjct: 241 QSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFD 300

Query: 301 KMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLI 360
           KMEQVFKSLL SKERPTLPTFNSMITNYGKAR +E AE V +KM  M Y P+++T ESLI
Sbjct: 301 KMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNFITYESLI 360

Query: 361 MMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVF 420
           MMYG CD VSKAREIFD M+ SGK V+VSTLNAMLDVYC+NGLPMEADLLF++A ++ + 
Sbjct: 361 MMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLL 420

Query: 421 PDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSP 465
           PDSTTYKLLYKAYTKA+ K+LV+KLLK+MD+ GIIPNKRFFLDALG   S P
Sbjct: 421 PDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGAFKSLP 466

[Close]
BLAST of CmoCh03G008170 vs. TrEMBL
Match: A0A061DQN3_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001217 PE=4 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 4.3e-189
Identity = 337/478 (70.50%), Postives = 394/478 (82.43%), Query Frame = 1 

Query: 6   SLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKS-AAKTDRSET 65
           SLQ     +PFS      Q+  + L  P  L      R+ CI+TRP RK+ ++K +  E 
Sbjct: 9   SLQLPAFHSPFS------QIYISTLSQPCHLSTRPIARISCITTRPRRKTGSSKAEEPEA 68

Query: 66  EELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQR 125
            ELVR ++R FSDKEPL+KTL++YVRV+R EHCFLLFEELGK DKWLQCLEVFRWMQKQR
Sbjct: 69  LELVRVLMRSFSDKEPLVKTLNRYVRVVRCEHCFLLFEELGKTDKWLQCLEVFRWMQKQR 128

Query: 126 WYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKA 185
           WYIADNG+YSKLI++MGKKGQ RMA+WLFSEMRNSGCRPD SVYNALITAHLHS+DK+KA
Sbjct: 129 WYIADNGIYSKLITVMGKKGQTRMAMWLFSEMRNSGCRPDVSVYNALITAHLHSRDKSKA 188

Query: 186 LVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYTYN 245
           L K + YF KMKGMERCKPN+VTYNIL RAF+QA  VDQVNALFKDL ESI++ DIYTYN
Sbjct: 189 LDKAMGYFNKMKGMERCKPNIVTYNILLRAFSQARNVDQVNALFKDLAESIIAPDIYTYN 248

Query: 246 GVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRS 305
           GVMDAYGKNGMI+EME++L+RMKSN+ KPD I+FN+LIDSYGKKQ FDKMEQVFKSLLRS
Sbjct: 249 GVMDAYGKNGMIREMESVLSRMKSNQCKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRS 308

Query: 306 KERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKA 365
           K++PTLPTFNSMI NYGKARL+E+AE VF+KM DM Y PS++T ESLIMMYG CDCVS+A
Sbjct: 309 KQKPTLPTFNSMIINYGKARLKEKAEHVFKKMTDMKYVPSFITYESLIMMYGFCDCVSRA 368

Query: 366 REIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYKA 425
           REIFDG+VNSGK +RVSTLNAML+VYC NGL MEAD LFE+A  M V  DS+TYKLLYKA
Sbjct: 369 REIFDGIVNSGKEMRVSTLNAMLEVYCRNGLHMEADRLFENAHKMGVIRDSSTYKLLYKA 428

Query: 426 YTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESS 483
           YTKA+ K+L++KL+K M+K GI+PNKRFFL+AL   GS P  P+      G R  +S+
Sbjct: 429 YTKANMKDLMQKLVKQMEKDGIVPNKRFFLEALEAFGSLPASPDSVSATIGDRPEKSA 480

[Close]
BLAST of CmoCh03G008170 vs. TAIR10
Match: AT4G39620.1 (AT4G39620.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 615.1 bits (1585), Expect = 3.8e-176
Identity = 320/502 (63.75%), Postives = 387/502 (77.09%), Query Frame = 1 

Query: 10  SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSAAKTDRS-E 69
           SPS   FS   SS   +    WL   ++L   RR+  TR+ C +    RK A +     E
Sbjct: 7   SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERE 66

Query: 70  TEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQ 129
              LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQ
Sbjct: 67  NRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQ 126

Query: 130 RWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 189
           RWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKAK
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186

Query: 190 ALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYTY 249
           AL KV  Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S VS D+YT+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246

Query: 250 NGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 309
           NGVMDAYGKNGMIKEME +L RM+SNE KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+R
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306

Query: 310 SKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 369
           SKE+PTLPTFNSMI NYGKAR+ ++AE VF+KM DM Y PS++T E +IMMYG+C  VS+
Sbjct: 307 SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366

Query: 370 AREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYK 429
           AREIF+ +  S + ++ STLNAML+VYC NGL +EAD LF +AS+ +V PD++TYK LYK
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426

Query: 430 AYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESSV 489
           AYTKAD KE V+ L+K M+K GI+PNKRFFL+AL   GS         +G+ +R S  S 
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-----RLPGSGSENRKSTRSS 486

Query: 490 EKPISSRNRRGSRKLESSVKNH 506
               S + R G++  E   K++
Sbjct: 487 RSRDSPKGRGGNQLTEFQDKDN 503

[Close]
BLAST of CmoCh03G008170 vs. TAIR10
Match: AT3G06430.1 (AT3G06430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 6.7e-40
Identity = 100/354 (28.25%), Postives = 174/354 (49.15%), Query Frame = 1 

Query: 103 ELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCR 162
           +L  K +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P+V TY+ L +A   A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLARM-KSNEIKPDIISFN 282
            D V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276

Query: 283 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDM 342
           +++  +G     D ME  ++        P   TFN +I +YGK R+ ++   V   M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336

Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEA 402
            +  +  T  ++I  +            FD M + G      T   +++ Y   GL  + 
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396

Query: 403 DLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFF 454
               + A+  ++  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]
BLAST of CmoCh03G008170 vs. TAIR10
Match: AT3G53170.1 (AT3G53170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 5.7e-39
Identity = 108/397 (27.20%), Postives = 188/397 (47.36%), Query Frame = 1 

Query: 64  TEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQ 123
           T+  V+G+ RK ++ E  L    K V            +E  K+++W   L++F  ++KQ
Sbjct: 87  TDAAVKGIERK-ANSEKYLTLWPKAV--------LEALDEAIKENRWQSALKIFNLLRKQ 146

Query: 124 RWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 183
            WY      Y+KL  ++G   Q   A  LF  M + G +P   VY +LI+ +     K++
Sbjct: 147 HWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVY----GKSE 206

Query: 184 ALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYTY 243
            L K     E MK +  CKP+V T+ +L     + G+ D V ++  ++    V     TY
Sbjct: 207 LLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTY 266

Query: 244 NGVMDAYGKNGMIKEMETMLARM-KSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLL 303
           N ++D YGK GM +EME++LA M +  +  PD+ + N +I SYG  +   KME  +    
Sbjct: 267 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 326

Query: 304 RSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVS 363
               +P + TFN +I ++GKA + ++   V   M+   +  + VT   +I  +G    + 
Sbjct: 327 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 386

Query: 364 KAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLY 423
           K  ++F  M   G      T  ++++ Y   GL ++ D +     +  V  D+  +  + 
Sbjct: 387 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 446

Query: 424 KAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGT 460
            AY +A     +++L   M++    P+K  F   + T
Sbjct: 447 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470

[Close]
BLAST of CmoCh03G008170 vs. TAIR10
Match: AT1G74850.1 (AT1G74850.1 plastid transcriptionally active 2)

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-35
Identity = 98/400 (24.50%), Postives = 189/400 (47.25%), Query Frame = 1 

Query: 68  VRGVIRKFSDKEP---LLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQR 127
           V  +I K S   P   + + LD +   +      L+F+E   +  W + L +F++MQ+Q 
Sbjct: 76  VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135

Query: 128 WYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKA 187
           W   +  +Y+ +IS++G++G +   + +F EM + G       Y ALI A+  +     +
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195

Query: 188 LVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAG-KVDQVNALFKDLDESIVSADIYTY 247
           L  +    ++MK  E+  P+++TYN +  A A+ G   + +  LF ++    +  DI TY
Sbjct: 196 LELL----DRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 255

Query: 248 NGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 307
           N ++ A    G+  E E +   M    I PD+ +++ L++++GK +  +K+  +   +  
Sbjct: 256 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 315

Query: 308 SKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 367
               P + ++N ++  Y K+   + A  VF +M+  G  P+  T   L+ ++G       
Sbjct: 316 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 375

Query: 368 AREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYK 427
            R++F  M +S      +T N +++V+   G   E   LF       + PD  TY+ +  
Sbjct: 376 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 435

Query: 428 AYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSS 464
           A  K    E   K+L+ M    I+P+ + +   +   G +
Sbjct: 436 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470

[Close]
BLAST of CmoCh03G008170 vs. TAIR10
Match: AT5G48730.1 (AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 6.5e-35
Identity = 103/350 (29.43%), Postives = 173/350 (49.43%), Query Frame = 1 

Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVY 168
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNA 228
            AL++A+  S   D A  L+      E+MK    C+P+V TY+IL ++F Q    D+V  
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 248

Query: 229 LFKDLDESIVSADIYTYNGVMDAYGKNGMIKEME-TMLARMKSNEIKPDIISFNLLIDSY 288
           L  D+    +  +  TYN ++DAYGK  M  EME T++  +  ++ KPD  + N  + ++
Sbjct: 249 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 308

Query: 289 GKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSY 348
           G     + ME  ++    S   P + TFN ++ +YGK+   ++   V   M+   Y  + 
Sbjct: 309 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 368

Query: 349 VTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEAD----- 408
           VT   +I  +G    + +   +F  M +        TL +++  Y   G   +AD     
Sbjct: 369 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKIGGV 428

Query: 409 LLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNK 451
           L F   S +++  D   +  L  AY + +    ++ +L+ M+K G  P+K
Sbjct: 429 LRFIENSDIRL--DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467

[Close]
BLAST of CmoCh03G008170 vs. NCBI nr
Match: gi|659080204|ref|XP_008440667.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis melo])

HSP 1 Score: 904.0 bits (2335), Expect = 1.2e-259
Identity = 460/531 (86.63%), Postives = 482/531 (90.77%), Query Frame = 1 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLS S QFSP FT   SSSR  QLS+ WLP+P SL++  STRVVC+STR +RKS  KTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSE EELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR++AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVE-------------------KPISSRNRRGSRKLESSVKNHAPELGLA 513
           SSVE                   KPISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of CmoCh03G008170 vs. NCBI nr
Match: gi|449451631|ref|XP_004143565.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis sativus])

HSP 1 Score: 901.0 bits (2327), Expect = 9.8e-259
Identity = 461/531 (86.82%), Postives = 484/531 (91.15%), Query Frame = 1 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQFSP+FTP  SSS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK   KTD
Sbjct: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSE EELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 SSVE-------------------KPISSRNRRGSRKLESSVKNHAPELGLA 513
           SSVE                   KP SSR R GSR  ES V+NHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]
BLAST of CmoCh03G008170 vs. NCBI nr
Match: gi|1009172443|ref|XP_015867273.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 710.7 bits (1833), Expect = 1.9e-201
Identity = 358/476 (75.21%), Postives = 409/476 (85.92%), Query Frame = 1 

Query: 1   MPLSFSLQ-FSPSFTPFSS-SSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAK 60
           MPLS S     PS   F+  S++N+  ++ WLP  L L R + TR+ C+STRP RKSA+K
Sbjct: 1   MPLSLSSHSLHPSTFLFTRPSTQNYNFAKPWLPNSLLLERTI-TRISCVSTRPKRKSASK 60

Query: 61  TDRSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFR 120
            + SE EELVR ++R FSDKEPLLKTL+KYV+++RTEHCFLLFEELGK DKWLQCLEVFR
Sbjct: 61  IESSEAEELVRLLMRSFSDKEPLLKTLNKYVKIVRTEHCFLLFEELGKSDKWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWYIADNG+YSKLIS+MGK GQ RMA+WLFSEMRNSGCRPDTSVYNAL+TAHLHS
Sbjct: 121 WMQKQRWYIADNGIYSKLISVMGKNGQTRMAMWLFSEMRNSGCRPDTSVYNALMTAHLHS 180

Query: 181 KDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSA 240
           KDK KAL K L YFEKMKGMERCKPNVVTYNIL RA+AQA  V+QVNAL KDLDESIVS 
Sbjct: 181 KDKTKALCKALGYFEKMKGMERCKPNVVTYNILLRAYAQARNVEQVNALLKDLDESIVSP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNGMI+EME++L+RMKSN+ KPDII+FNLLIDSYGK+Q FDKMEQV+
Sbjct: 241 DIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKRQEFDKMEQVY 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 360
           KSLLRSKERPTLPTFNSMI NYGKARL+E+AE VF+KM DMGY PS++T ESLIMMYG C
Sbjct: 301 KSLLRSKERPTLPTFNSMIINYGKARLQEKAENVFKKMTDMGYAPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTY 420
           DCVSKA++IFD  V SGK ++VSTLNAMLDVYCMNGLPMEA+ LFESA+S+ V PDS+TY
Sbjct: 361 DCVSKAQDIFDRWVESGKQLKVSTLNAMLDVYCMNGLPMEANKLFESANSIGVIPDSSTY 420

Query: 421 KLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGT 475
           KLLYKAYTKA+ KEL+ KLLK+M + GI+PNK FFL+ALGT  SSP  P+ A   T
Sbjct: 421 KLLYKAYTKANMKELLGKLLKHMHRDGIVPNKWFFLEALGTFSSSPPSPDSANGTT 475

[Close]
BLAST of CmoCh03G008170 vs. NCBI nr
Match: gi|645241535|ref|XP_008227123.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Prunus mume])

HSP 1 Score: 687.6 bits (1773), Expect = 1.7e-194
Identity = 347/477 (72.75%), Postives = 403/477 (84.49%), Query Frame = 1 

Query: 1   MPLSFSLQ-FSPSFTPFSSS-SRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAK 60
           MPLS S     PS   F+   S+N  L+Q WLP  L LR+   TR+ C+STRP RK   K
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFSQNSNLTQPWLPHVL-LRKRPMTRISCVSTRPKRKPGTK 60

Query: 61  TDRSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFR 120
           T+  +  E+VR ++R FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WLQCLEVFR
Sbjct: 61  TEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWY+ADNGVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYNALI+AHL+S
Sbjct: 121 WMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNS 180

Query: 181 KDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSA 240
           KDKA+AL K L YF+KMKGMERC+PN+VTYNIL RAFAQ+  V++VN+LFKDLDESI S 
Sbjct: 181 KDKARALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME++L+RMKSN+ KPDII+FNLLIDSYGKKQ FDKMEQVF
Sbjct: 241 DIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVF 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 360
           KSLLRSKE+PTLPTFNSMI NYGKARL+E+AE+VF+KM DM Y PS++T ESLIMMYG C
Sbjct: 301 KSLLRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTY 420
           DCVSKARE+FD + +SGK ++VSTLNAMLDVYCMNGLP+EAD LF + +S+ V P+ +TY
Sbjct: 361 DCVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNVSTY 420

Query: 421 KLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTG 476
           KLLYKAYTKA+ KEL+EKLLK MDK GI+PNKRFFL+ALG   SSP  P      TG
Sbjct: 421 KLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 476

[Close]
BLAST of CmoCh03G008170 vs. NCBI nr
Match: gi|595871239|ref|XP_007212021.1| (hypothetical protein PRUPE_ppa004899mg [Prunus persica])

HSP 1 Score: 681.4 bits (1757), Expect = 1.2e-192
Identity = 345/477 (72.33%), Postives = 401/477 (84.07%), Query Frame = 1 

Query: 1   MPLSFSLQ-FSPSFTPFSSS-SRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAK 60
           MPLS S     PS   F+   S+N  L+Q WLP  L  +R V TR+ C+STRP RK   K
Sbjct: 1   MPLSLSPNSLHPSTLAFAQIFSQNSNLTQPWLPHVLLRKRPV-TRISCVSTRPKRKPGTK 60

Query: 61  TDRSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFR 120
           T+  +  E+VR ++R FSDKEPLLKTL+KYVR++RTEHCFLLFEELGK D+WLQCLEVFR
Sbjct: 61  TEDPDVREVVRMLMRSFSDKEPLLKTLNKYVRIVRTEHCFLLFEELGKSDEWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWY+ADNGVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYNALI+AHL+S
Sbjct: 121 WMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNS 180

Query: 181 KDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSA 240
           KDKAKAL K L YF+KMKGMERC+PN+VTYNIL RAFAQ+  V++VN+LFKDLDESI S 
Sbjct: 181 KDKAKALDKALRYFDKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASP 240

Query: 241 DIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVF 300
           DIYTYNGVMDAYGKNG I+EME++L+ MKSN+ KPDII+FNLLIDSYGKKQ FDKMEQVF
Sbjct: 241 DIYTYNGVMDAYGKNGNIREMESVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVF 300

Query: 301 KSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 360
           KSL+RSKE+PTLPTFNSMI NYGKARL+E+AE+VF+KM DM Y PS++T ESLIMMYG C
Sbjct: 301 KSLVRSKEKPTLPTFNSMIINYGKARLKEKAEDVFKKMIDMKYTPSFITYESLIMMYGFC 360

Query: 361 DCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTY 420
           D VSKARE+FD + +SGK ++VSTLNAMLDVYCMNGLP+EAD LF + +S+ V P+ +TY
Sbjct: 361 DSVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNGLPVEADKLFVNGNSIGVRPNVSTY 420

Query: 421 KLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTG 476
           KLLYKAYTKA+ KEL+EKLLK MDK GI+PNKRFFL+ALG   SSP  P      TG
Sbjct: 421 KLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTG 476

The following BLAST results are available for this feature:
BLAST of CmoCh03G008170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP358_ARATH6.7e-17563.75Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
PP216_ARATH1.2e-3828.25Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
PP279_ARATH1.0e-3727.20Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN... [more]
PP124_ARATH1.8e-3424.50Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
PP424_ARATH1.1e-3329.43Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
BLAST of CmoCh03G008170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGV8_CUCSA6.8e-25986.82Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501290 PE=4 SV=1[more]
M5X2C9_PRUPE8.5e-19372.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004899mg PE=4 SV=1[more]
D7SW37_VITVI1.4e-19271.07Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01360 PE=4 SV=... [more]
B9T1C7_RICCO5.5e-19274.36Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061DQN3_THECC4.3e-18970.50Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma c... [more]
BLAST of CmoCh03G008170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39620.13.8e-17663.75 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G06430.16.7e-4028.25 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53170.15.7e-3927.20 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G74850.11.0e-3524.50 plastid transcriptionally active 2[more]
AT5G48730.16.5e-3529.43 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmoCh03G008170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080204|ref|XP_008440667.1|1.2e-25986.63PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
gi|449451631|ref|XP_004143565.1|9.8e-25986.82PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
gi|1009172443|ref|XP_015867273.1|1.9e-20175.21PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-... [more]
gi|645241535|ref|XP_008227123.1|1.7e-19472.75PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-... [more]
gi|595871239|ref|XP_007212021.1|1.2e-19272.33hypothetical protein PRUPE_ppa004899mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G008170.1CmoCh03G008170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 346..375
score: 0.0092coord: 312..340
score: 7.6E-6coord: 382..405
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 227..287
score: 1.1E-9coord: 152..215
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 206..237
score: 0.0021coord: 276..309
score: 1.6E-5coord: 132..165
score: 3.0E-5coord: 241..275
score: 2.0E-9coord: 382..414
score: 4.3E-4coord: 312..344
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 414..448
score: 9.175coord: 93..127
score: 5.064coord: 309..343
score: 11.411coord: 204..238
score: 9.383coord: 129..163
score: 11.323coord: 344..378
score: 7.607coord: 379..413
score: 8.539coord: 274..308
score: 10.128coord: 164..200
score: 5.207coord: 239..273
score: 11
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 27..453
score: 1.1E
NoneNo IPR availablePANTHERPTHR24015:SF490SUBFAMILY NOT NAMEDcoord: 27..453
score: 1.1E