Carg00668 (gene) Silver-seed gourd

Overview
NameCarg00668
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein, chloroplastic
LocationCucurbita_argyrosperma_scaffold_014 : 916777 .. 918787 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCCACCCCTTTCTTGATCGGATTTTGGATTTTGGATTTTGGATTTTGCTATCCTTTCCCCGTCGAAGACGAAGCTTAACATACAATGCCCCTTTCTTTTTCTCTGCAATTTTCTCCCTCATTTACTCCATTTTCTTCTTCTTCCCGAAACTTCCAACTCTCTCAGACATGGCTTCCACTCCCATTGTCTCTGAGGAGGGCCGTTTCGACCCGAGTGGTCTGTATTTCAACTCGACCCAATAGGAAATCTGCGGCTAAGACCGACAGGTCGGAGGCTGAAGAACTGGTTCGCGGCGTAATCAGAAAGTTCAGCGATAAAGAACCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTCTTTGAGGAATTAGGGAAAAAGGATAAATGGCTTCAGTGCCTCGAGGTTCGCTCTTCTTCTTTTGAACTCTGAATTAGGGCCTCTGGGTGTTGATTTTTCTAACTTCTATAGCTGCCTGTGAAGTGTTGATAGATGGGTAATGATGAAAATGCTCACAGACAGAGTTGATTGAATTTGAAAGCGAGGATATGAATTTTCAATTTGTGAACTATACACTTCCTTGTAAAATATAGGAAATGAATGGAATTTGTAATGTAGTTCAAGCTCTATTTGGCATGGATGAACAATGGAGAGTCTAAATTTTTCTGGGTGAAGCTAAAAAGGCAAAGAAATTCTTATTGATGTATTTCATTTTCAGGTCTTCAGATGGATGCAGAAACAGCGCTGGTATATTGCTGACAATGGGGTTTATTCTAAACTGATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATATGGCTCTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTCTACAATGCACTTATCACAGCGCACCTTCATTCTAAGGACAAAGCCAAGGCTTTGGTTAAAGTCCTTTGGTACTTTGAGAAGATGAAGGGAATGGAACGGTGTAAGCCAAATGTTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATGCCTTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATCAAAGAGATGGAAACGATGCTTGCTCGCATGAAAAGTAATGAAATCAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCGAAGGAGAGGCCGACGCTACCTACATTCAATTCGATGATCACAAACTACGGGAAGGCACGACTTAGAGAGAAAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATATGATCCAAGCTATGTCACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGCGGTGAGAGTCTCGACCCTCAACGCCATGCTTGATGTTTACTGCATGAATGGTTTGCCCATGGAAGCCGATTTGCTTTTCGAGAGTGCGAGTAGTATGAAGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGCGAAGGAACTTGTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACCAGAACCTGCAAGAACTGGAACAGGTTCAAGACACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAAATAGAAGAGGTTCAAGAAAATTGGAAAGTAGTGTGAAAAACCATGCTCCAGAGTTAGGCTTAGCTTAAGAAGTTTTGTAGTCGGTCTTCATTCATAAGGAGCTTCTTGACTTCCCCCATTGGAGAAAGGTGCTGCAGTTC

mRNA sequence

AAATCCACCCCTTTCTTGATCGGATTTTGGATTTTGGATTTTGGATTTTGCTATCCTTTCCCCGTCGAAGACGAAGCTTAACATACAATGCCCCTTTCTTTTTCTCTGCAATTTTCTCCCTCATTTACTCCATTTTCTTCTTCTTCCCGAAACTTCCAACTCTCTCAGACATGGCTTCCACTCCCATTGTCTCTGAGGAGGGCCGTTTCGACCCGAGTGGTCTGTATTTCAACTCGACCCAATAGGAAATCTGCGGCTAAGACCGACAGGTCGGAGGCTGAAGAACTGGTTCGCGGCGTAATCAGAAAGTTCAGCGATAAAGAACCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTCTTTGAGGAATTAGGGAAAAAGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAGCGCTGGTATATTGCTGACAATGGGGTTTATTCTAAACTGATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATATGGCTCTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTCTACAATGCACTTATCACAGCGCACCTTCATTCTAAGGACAAAGCCAAGGCTTTGGTTAAAGTCCTTTGGTACTTTGAGAAGATGAAGGGAATGGAACGGTGTAAGCCAAATGTTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATGCCTTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATCAAAGAGATGGAAACGATGCTTGCTCGCATGAAAAGTAATGAAATCAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCGAAGGAGAGGCCGACGCTACCTACATTCAATTCGATGATCACAAACTACGGGAAGGCACGACTTAGAGAGAAAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATATGATCCAAGCTATGTCACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGCGGTGAGAGTCTCGACCCTCAACGCCATGCTTGATGTTTACTGCATGAATGGTTTGCCCATGGAAGCCGATTTGCTTTTCGAGAGTGCGAGTAGTATGAAGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGCGAAGGAACTTGTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACCAGAACCTGCAAGAACTGGAACAGGTTCAAGACACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAAATAGAAGAGGTTCAAGAAAATTGGAAAGTAGTGTGAAAAACCATGCTCCAGAGTTAGGCTTAGCTTAAGAAGTTTTGTAGTCGGTCTTCATTCATAAGGAGCTTCTTGACTTCCCCCATTGGAGAAAGGTGCTGCAGTTC

Coding sequence (CDS)

ATGCCCCTTTCTTTTTCTCTGCAATTTTCTCCCTCATTTACTCCATTTTCTTCTTCTTCCCGAAACTTCCAACTCTCTCAGACATGGCTTCCACTCCCATTGTCTCTGAGGAGGGCCGTTTCGACCCGAGTGGTCTGTATTTCAACTCGACCCAATAGGAAATCTGCGGCTAAGACCGACAGGTCGGAGGCTGAAGAACTGGTTCGCGGCGTAATCAGAAAGTTCAGCGATAAAGAACCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTCTTTGAGGAATTAGGGAAAAAGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAGCGCTGGTATATTGCTGACAATGGGGTTTATTCTAAACTGATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATATGGCTCTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTCTACAATGCACTTATCACAGCGCACCTTCATTCTAAGGACAAAGCCAAGGCTTTGGTTAAAGTCCTTTGGTACTTTGAGAAGATGAAGGGAATGGAACGGTGTAAGCCAAATGTTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATGCCTTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATCAAAGAGATGGAAACGATGCTTGCTCGCATGAAAAGTAATGAAATCAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGACAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCGAAGGAGAGGCCGACGCTACCTACATTCAATTCGATGATCACAAACTACGGGAAGGCACGACTTAGAGAGAAAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATATGATCCAAGCTATGTCACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGCGGTGAGAGTCTCGACCCTCAACGCCATGCTTGATGTTTACTGCATGAATGGTTTGCCCATGGAAGCCGATTTGCTTTTCGAGAGTGCGAGTAGTATGAAGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGCGAAGGAACTTGTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACCAGAACCTGCAAGAACTGGAACAGGTTCAAGACACTCAGAAAGTAGTGTGGAAAAACCAATATCTTCAAGAAATAGAAGAGGTTCAAGAAAATTGGAAAGTAGTGTGAAAAACCATGCTCCAGAGTTAGGCTTAGCTTAA

Protein sequence

MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTDRSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESSVEKPISSRNRRGSRKLESSVKNHAPELGLA
Homology
[Close]
BLAST of Carg00668 vs. NCBI nr
Match: XP_022950765.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita moschata])

HSP 1 Score: 607.1 bits (1564), Expect = 5.7e-170
Identity = 511/512 (99.80%), Postives = 511/512 (99.80%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSE EELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA 513
           XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA 512

[Close]
BLAST of Carg00668 vs. NCBI nr
Match: XP_023543919.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 607.1 bits (1564), Expect = 5.7e-170
Identity = 511/512 (99.80%), Postives = 511/512 (99.80%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKS AKTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA 513
           XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA 512

[Close]
BLAST of Carg00668 vs. NCBI nr
Match: XP_022978471.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita maxima])

HSP 1 Score: 596.3 bits (1536), Expect = 1.0e-166
Identity = 505/512 (98.63%), Postives = 507/512 (99.02%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQFSPSFTPFSSSSRNFQ SQTWLPLPLSLRRAVSTRVVCISTRP RKS AKTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSM+VFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPA TGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXHAPELGLA 513
           XXXXXXXXXXXXXXXXXXXXXXXXH PELGLA
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXHTPELGLA 512

[Close]
BLAST of Carg00668 vs. NCBI nr
Match: XP_008440667.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis melo])

HSP 1 Score: 520.0 bits (1338), Expect = 9.1e-144
Identity = 436/480 (90.83%), Postives = 454/480 (94.58%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLS S QFSP FT   SSSR  QLS+ WLP+P SL++  STRVVC+STR +RKS  KTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VS XX
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   C+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

[Close]
BLAST of Carg00668 vs. NCBI nr
Match: XP_004143565.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis sativus] >KGN48788.1 hypothetical protein Csa_6G501290 [Cucumis sativus])

HSP 1 Score: 501.9 bits (1291), Expect = 2.6e-138
Identity = 431/479 (89.98%), Postives = 449/479 (93.74%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQ          SS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK   KTD
Sbjct: 1   MPLSFSLQXXXXXXXXXXSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSEAEELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VS XX
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   C+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHS 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNS 476

[Close]
BLAST of Carg00668 vs. TAIR10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 303.1 bits (775), Expect = 3.2e-82
Identity = 156/231 (67.53%), Postives = 181/231 (78.35%), Query Frame = 0 

Query: 10  SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSAAK-TDRSE 69
           SPS   FS   SS   +    WL   ++L   RR+  TR+ C +    RK A + +   E
Sbjct: 7   SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERE 66

Query: 70  AEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQ 129
              LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQ
Sbjct: 67  NRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQ 126

Query: 130 RWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 189
           RWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKAK
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186

Query: 190 ALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDES 235
           AL KV  Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237

[Close]
BLAST of Carg00668 vs. TAIR10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 5.9e-20
Identity = 50/137 (36.50%), Postives = 80/137 (58.39%), Query Frame = 0 

Query: 103 ELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCR 162
           +L  K +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P+V TY+ L +A   A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNALFKDLDESIVS 238
            D V++L+K++DE +++
Sbjct: 217 FDLVDSLYKEMDERLIT 227

[Close]
BLAST of Carg00668 vs. TAIR10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 6.7e-16
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 0 

Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVY 168
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNA 228
            AL++A+  S   D A  L+      E+MK    C+P+V TY+IL ++F Q    D+V  
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 247

Query: 229 LFKDL 232
           L  D+
Sbjct: 249 LLSDM 247

[Close]
BLAST of Carg00668 vs. TAIR10
Match: AT2G15820.1 (endonucleases)

HSP 1 Score: 56.6 bits (135), Expect = 5.2e-08
Identity = 30/99 (30.30%), Postives = 50/99 (50.51%), Query Frame = 0 

Query: 116 VFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAH 175
           V+RWM +Q WY  D G+ +KL   +GK+ +      +F ++ N G  P  S ++ L+ A+
Sbjct: 224 VYRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILVVAY 283

Query: 176 LHSKDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRA 215
           L S      L +    + +M  +   KP +  +N L RA
Sbjct: 284 LSSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRA 322

[Close]
BLAST of Carg00668 vs. TAIR10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07
Identity = 36/126 (28.57%), Postives = 63/126 (50.00%), Query Frame = 0 

Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVY 168
           K L  +E     QK+   ++  G  +++IS+ GK G    A  +F EM N  C+     +
Sbjct: 88  KRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSF 147

Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNA 228
           NAL++A+  SK  D  + L      F ++ G    KP++V+YN L +A  +   + +  A
Sbjct: 148 NALLSAYRLSKKFDVVEEL------FNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVA 207

Query: 229 LFKDLD 233
           L  +++
Sbjct: 208 LLDEIE 207

[Close]
BLAST of Carg00668 vs. Swiss-Prot
Match: sp|Q9SV96|PP358_ARATH (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 5.7e-81
Identity = 156/231 (67.53%), Postives = 181/231 (78.35%), Query Frame = 0 

Query: 10  SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSAAK-TDRSE 69
           SPS   FS   SS   +    WL   ++L   RR+  TR+ C +    RK A + +   E
Sbjct: 7   SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERE 66

Query: 70  AEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQ 129
              LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQ
Sbjct: 67  NRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQ 126

Query: 130 RWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 189
           RWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKAK
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186

Query: 190 ALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDES 235
           AL KV  Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237

[Close]
BLAST of Carg00668 vs. Swiss-Prot
Match: sp|A7LN87|PPR5_MAIZE (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.7e-73
Identity = 129/176 (73.30%), Postives = 155/176 (88.07%), Query Frame = 0 

Query: 62  SEAEELVRGVIRKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 121
           +EA ELVR ++R+ +  KE L+  LD++VRV+RTEHCFLLFEELG++D WLQCL+VFRWM
Sbjct: 55  AEAAELVRSLLRRTAGGKERLVPVLDRHVRVVRTEHCFLLFEELGRRDAWLQCLDVFRWM 114

Query: 122 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 181
           QKQRWY+ADNG+YSKLIS+MG+KGQIRMA+WLFS+MRNSGC+PDTSVYN+LI AHLHS+D
Sbjct: 115 QKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRD 174

Query: 182 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIV 237
           K KAL K L YFEKMK +ERC+P +VTYNIL RAFAQAG   QV+ LFKDLDES+V
Sbjct: 175 KTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVV 230

[Close]
BLAST of Carg00668 vs. Swiss-Prot
Match: sp|A3ABE1|PPR5_ORYSJ (Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2)

HSP 1 Score: 268.1 bits (684), Expect = 2.0e-70
Identity = 125/169 (73.96%), Postives = 149/169 (88.17%), Query Frame = 0 

Query: 67  LVRGVIRKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQRW 126
           LVR  +R+ S  KE L+  LD++V+V+RTEHCFLLFEELG++D WLQCLEVFRWMQKQRW
Sbjct: 57  LVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEVFRWMQKQRW 116

Query: 127 YIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKAL 186
           Y+ADNG+YSKLIS+MG+KGQIRMA+WLFS+MRNSGCRPDTSVYN+LI  HLHS+DK+KAL
Sbjct: 117 YVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHSRDKSKAL 176

Query: 187 VKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDES 235
            K L YFEKMK ++RC+PN+VTYNIL RAFAQAG   Q++ LFKDLDES
Sbjct: 177 AKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDES 225

[Close]
BLAST of Carg00668 vs. Swiss-Prot
Match: sp|Q9SQU6|PP216_ARATH (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-18
Identity = 50/137 (36.50%), Postives = 80/137 (58.39%), Query Frame = 0 

Query: 103 ELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCR 162
           +L  K +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P+V TY+ L +A   A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNALFKDLDESIVS 238
            D V++L+K++DE +++
Sbjct: 217 FDLVDSLYKEMDERLIT 227

[Close]
BLAST of Carg00668 vs. Swiss-Prot
Match: sp|Q9FKC3|PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-14
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 0 

Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVY 168
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNA 228
            AL++A+  S   D A  L+      E+MK    C+P+V TY+IL ++F Q    D+V  
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 247

Query: 229 LFKDL 232
           L  D+
Sbjct: 249 LLSDM 247

[Close]
BLAST of Carg00668 vs. TrEMBL
Match: tr|A0A1S3B2D9|A0A1S3B2D9_CUCME (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485009 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.0e-144
Identity = 436/480 (90.83%), Postives = 454/480 (94.58%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLS S QFSP FT   SSSR  QLS+ WLP+P SL++  STRVVC+STR +RKS  KTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VS XX
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   C+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

[Close]
BLAST of Carg00668 vs. TrEMBL
Match: tr|A0A0A0KGV8|A0A0A0KGV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138
Identity = 431/479 (89.98%), Postives = 449/479 (93.74%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           MPLSFSLQ          SS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK   KTD
Sbjct: 1   MPLSFSLQXXXXXXXXXXSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           RSEAEELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VS XX
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXX   C+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHS 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNS 476

[Close]
BLAST of Carg00668 vs. TrEMBL
Match: tr|A0A2C9UWI2|A0A2C9UWI2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G140500 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.2e-105
Identity = 378/479 (78.91%), Postives = 420/479 (87.68%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLP-LPLSLRRAV-STRVVCISTRPNRKSAAK 60
           MPL+ S   S   +  +SSS    +SQ   P LP + ++ +  T + C STRP +K+   
Sbjct: 1   MPLNLS-PHSLQLSTLNSSSFTQHVSQILNPTLPWTPQKHLCRTHISCASTRPRKKAVPI 60

Query: 61  TDRSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFR 120
           +++SE EELVR +++ F+DK PL++T+DKYVR++RTEHCFLLFEELGK+DKWLQCLEVFR
Sbjct: 61  SEKSETEELVRVLMKSFTDKVPLVRTMDKYVRIVRTEHCFLLFEELGKRDKWLQCLEVFR 120

Query: 121 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHS 180
           WMQKQRWYI D+GVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYNALITAHLHS
Sbjct: 121 WMQKQRWYIPDSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 180

Query: 181 KDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSA 240
           KDK KAL K L YFEKMKGMERC+PNVVTYNIL RAFAQA  V+QVNALFKDLD+SIV  
Sbjct: 181 KDKEKALSKALGYFEKMKGMERCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTY 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLF+SA S++V PDS+TY
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFDSARSIRVLPDSSTY 420

Query: 421 KLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSR 478
           KLLYKAYTKA+ KELV+KLLK+MD+ GI+PNKRFFL+ALG   SSP     A   +GS+
Sbjct: 421 KLLYKAYTKANMKELVQKLLKHMDRDGIVPNKRFFLEALGAFKSSPATSNSANHASGSK 478

[Close]
BLAST of Carg00668 vs. TrEMBL
Match: tr|A0A218XC22|A0A218XC22_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr001844 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.6e-104
Identity = 340/446 (76.23%), Postives = 375/446 (84.08%), Query Frame = 0 

Query: 20  SRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD--RSEAEELVRGVIRKFSD 79
           SRN+  + +W P+ L+ R+A+  RV C+STRP RKSA + +  ++EA+ELVR ++RKF+D
Sbjct: 33  SRNYGFALSWGPMNLT-RKALGARVACVSTRPRRKSAVQGEDAQAEAQELVRVLLRKFTD 92

Query: 80  KEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLI 139
           +EPL+KTL+KYVR++RTEHCFLLFEELGK +KW QCLEVFRWMQKQRWYIADNGVYSKLI
Sbjct: 93  REPLVKTLNKYVRIVRTEHCFLLFEELGKSEKWTQCLEVFRWMQKQRWYIADNGVYSKLI 152

Query: 140 SIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKG 199
           S+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYN+LITAHLHSKDKAKAL K L YF KMK 
Sbjct: 153 SVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALAKALGYFGKMKS 212

Query: 200 MERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXXXXXXXXXXXXXXXXXXX 259
           MERCKPN+VTYNIL RAFAQAG V+QVN LFKDL+ESIV  XXXXXXXXXXXXXXXXXXX
Sbjct: 213 MERCKPNIVTYNILLRAFAQAGNVEQVNDLFKDLEESIVXXXXXXXXXXXXXXXXXXXXX 272

Query: 260 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 332

Query: 320 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 379
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  
Sbjct: 333 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSSRDVFDGLMRSGKE 392

Query: 380 XXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKL 439
                     DVYCMNGLP EAD LFE      V PD+TTYKLLYKAYTKA+ KELVEKL
Sbjct: 393 IRVSTLNAMLDVYCMNGLPEEADRLFERVRGFGVVPDATTYKLLYKAYTKANKKELVEKL 452

Query: 440 LKNMDKAGIIPNKRFFLDALGTVGSS 464
           L++MD+ GI+PNKRFFL+ L   GSS
Sbjct: 453 LRHMDRDGIVPNKRFFLETLEVSGSS 477

[Close]
BLAST of Carg00668 vs. TrEMBL
Match: tr|D7SW37|D7SW37_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g01360 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.2e-103
Identity = 361/475 (76.00%), Postives = 395/475 (83.16%), Query Frame = 0 

Query: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
           + L  S   SP+FT    SSR ++ ++  LP      R  +T V C+STRP RK   K D
Sbjct: 12  LQLYSSSTLSPTFT--LPSSRFYKPTRLHLP-----PRPSTTVVSCVSTRPRRKPGPKPD 71

Query: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
           +SE EELVR +++ F  + PL+ TL+KYV+V+RTEHCF LFEELGK DKWLQCLEVFRWM
Sbjct: 72  KSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWM 131

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLIS+MGKKGQ RMA+WLFSEMRNSGCRPDTSVYNALITAHLHS+D
Sbjct: 132 QKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRD 191

Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSAXX 240
           K+KAL+K L YF+KMKGMERCKPN+VTYNIL RAFAQA  V+Q NALFK+L+ESIV  XX
Sbjct: 192 KSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVXXXX 251

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 312 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 371

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
           XXXXXXXXXXXXX              +VYCMNGLPMEADLL E A   + FP S+TYKL
Sbjct: 372 XXXXXXXXXXXXXSKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKL 431

Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTG 476
           LYKAYTKAD KEL+EKLLK MD  GI+PNKRFFL+ALG  GSSP   E A + TG
Sbjct: 432 LYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTG 479

The following BLAST results are available for this feature:
BLAST of Carg00668 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950765.15.7e-17099.80pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... [more]
XP_023543919.15.7e-17099.80pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... [more]
XP_022978471.11.0e-16698.63pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... [more]
XP_008440667.19.1e-14490.83PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
XP_004143565.12.6e-13889.98PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
BLAST of Carg00668 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39620.13.2e-8267.53Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G06430.15.9e-2036.50Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48730.16.7e-1637.60Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G15820.15.2e-0830.30endonucleases[more]
AT1G55890.11.5e-0728.57Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg00668 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SV96|PP358_ARATH5.7e-8167.53Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
sp|A7LN87|PPR5_MAIZE5.7e-7373.30Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4... [more]
sp|A3ABE1|PPR5_ORYSJ2.0e-7073.96Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza... [more]
sp|Q9SQU6|PP216_ARATH1.1e-1836.50Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
sp|Q9FKC3|PP424_ARATH1.2e-1437.60Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
BLAST of Carg00668 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B2D9|A0A1S3B2D9_CUCME6.0e-14490.83pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis ... [more]
tr|A0A0A0KGV8|A0A0A0KGV8_CUCSA1.7e-13889.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=4 SV=1[more]
tr|A0A2C9UWI2|A0A2C9UWI2_MANES3.2e-10578.91Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G140500 PE=4 SV=... [more]
tr|A0A218XC22|A0A218XC22_PUNGR1.6e-10476.23Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr001844 PE=4 SV=1[more]
tr|D7SW37|D7SW37_VITVI5.2e-10376.00Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g01360 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00668-RACarg00668-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 382..405
e-value: 0.0023
score: 18.0
coord: 312..340
e-value: 2.0E-6
score: 27.5
coord: 346..375
e-value: 0.0094
score: 16.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 227..287
e-value: 1.1E-9
score: 38.1
coord: 152..215
e-value: 3.0E-9
score: 36.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 382..414
e-value: 4.3E-4
score: 18.3
coord: 241..275
e-value: 2.0E-9
score: 35.1
coord: 132..165
e-value: 3.0E-5
score: 21.9
coord: 312..344
e-value: 2.4E-7
score: 28.5
coord: 276..309
e-value: 1.6E-5
score: 22.8
coord: 206..237
e-value: 0.0021
score: 16.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 11.893
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..200
score: 5.207
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..343
score: 11.575
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..378
score: 7.607
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 379..413
score: 8.539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..238
score: 9.383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 9.175
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..308
score: 10.128
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 93..127
score: 5.064
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 11.323
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 323..505
e-value: 6.6E-26
score: 93.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 53..233
e-value: 7.9E-35
score: 122.1
coord: 234..307
e-value: 2.0E-14
score: 55.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..503
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..482
NoneNo IPR availablePANTHERPTHR24015:SF490SUBFAMILY NOT NAMEDcoord: 48..482