Csa6G199790 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G199790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRapid alkalinization factor; contains IPR008801 (Rapid ALkalinization Factor)
LocationChr6 : 12754615 .. 12755274 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAACAAAGACGCAGAGCCTAAAACTTTTATTTTAAAAAAAAAACACACAAAAACAAAATCTATAATTGCTATGAAGCTCGGTCTCTGTCTCCTCCTACTCGTAGCTGCCATCGCCATCACTCTTCCTGTTGCCTTATGTGATTGGACTCGTGCCTATGGTAACCCCGACTACGCCTTTTGGGGCACGGCTGAACCGGCGACGATAAATGATGTTGATGACAGCAGACGACTACTTTTCCAATATGGATTTGCTTACAAATATCCAAAGAATAAGTATTTGGGTTATGATGCACTTAGGAAGAACAACTCCCCTTGCCGTCATCGTGGACACTCTTATTATGACTGTACGAAGCGCCGAAAGGCCAACCCTTATCGTCGTGGGTGCATCGCTATCACTGGTTGTGCTCGATTCACGGATTAAGTTTTTAAAATGATCCATTAATGGAAAATTATATATTTTTATAATTTAACGGAATTTATTTTTAGTTTTATTTACTTTATGATCAAATCTTGATGTTGGGAATAAATTCTGTTATTTGCTTGTTTATATTTCTTACTGTATTCCTTGATTGTAATGTGTGCTTTTCTTGTATGTATGCTTTTATGGGTTGTGTTCTTGTTTGAAATTTAAATAAAATTATTATATTTACATTTACA

mRNA sequence

ATGAAGCTCGGTCTCTGTCTCCTCCTACTCGTAGCTGCCATCGCCATCACTCTTCCTGTTGCCTTATGTGATTGGACTCGTGCCTATGGTAACCCCGACTACGCCTTTTGGGGCACGGCTGAACCGGCGACGATAAATGATGTTGATGACAGCAGACGACTACTTTTCCAATATGGATTTGCTTACAAATATCCAAAGAATAAGTATTTGGGTTATGATGCACTTAGGAAGAACAACTCCCCTTGCCGTCATCGTGGACACTCTTATTATGACTGTACGAAGCGCCGAAAGGCCAACCCTTATCGTCGTGGGTGCATCGCTATCACTGGTTGTGCTCGATTCACGGATTAA

Coding sequence (CDS)

ATGAAGCTCGGTCTCTGTCTCCTCCTACTCGTAGCTGCCATCGCCATCACTCTTCCTGTTGCCTTATGTGATTGGACTCGTGCCTATGGTAACCCCGACTACGCCTTTTGGGGCACGGCTGAACCGGCGACGATAAATGATGTTGATGACAGCAGACGACTACTTTTCCAATATGGATTTGCTTACAAATATCCAAAGAATAAGTATTTGGGTTATGATGCACTTAGGAAGAACAACTCCCCTTGCCGTCATCGTGGACACTCTTATTATGACTGTACGAAGCGCCGAAAGGCCAACCCTTATCGTCGTGGGTGCATCGCTATCACTGGTTGTGCTCGATTCACGGATTAA

Protein sequence

MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD*
Homology
[Close]
BLAST of Csa6G199790 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.1e-15
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1 

Query: 4   GLCLLLLVA-AIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAY 63
           GL +L +VA ++  T P+     T++  N         E  ++ D + +RR L +     
Sbjct: 10  GLLILAMVAKSVNATYPL-----TKSCINGQGCIGEDDELESLMDSETNRRQLAR----- 69

Query: 64  KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARF 115
                +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C R+
Sbjct: 70  ---GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of Csa6G199790 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.7e-14
Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWT--RAYGNPDYAFWGTAEPATINDVDDSRRLLFQY 60
           M + + L+L +  +A+    A   WT  ++  N         E   + D + +RR L   
Sbjct: 1   MGIKILLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAA- 60

Query: 61  GFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116
                  +  Y+ Y ALRKNN PC  RG SYYDC KR++ANPYRRGC  IT C R T
Sbjct: 61  -------RRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]
BLAST of Csa6G199790 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.1e-11
Identity = 37/96 (38.54%), Postives = 49/96 (51.04%), Query Frame = 1 

Query: 20  VALCDWTRAYGNPDYAFWGTAEPATINDVDD--SRRLLFQYGFAYKYPKNKYLGYDALRK 79
           +A C  + A G+    F+G  E     ++D   +RR+L            +Y+ Y ALR+
Sbjct: 51  IAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL---------ATRRYISYGALRR 110

Query: 80  NNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR 114
           N  PC  RG SYY+C +  +ANPY RGC AIT C R
Sbjct: 111 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of Csa6G199790 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1 

Query: 47  DVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCI 106
           D D SRR+L Q          KY+ Y A+R+N+ PC  RG SYY+C +  +ANPY RGC 
Sbjct: 62  DSDISRRILAQ---------KKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCS 119

Query: 107 AITGCAR 114
            IT C R
Sbjct: 122 TITRCRR 119

[Close]
BLAST of Csa6G199790 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.5e-10
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 1 

Query: 39  TAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKA 98
           TAE     D + +RR+L            KY+ Y ALR+N  PC  RG SYY+C +  +A
Sbjct: 51  TAEEEFEMDSEINRRIL---------ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQA 110

Query: 99  NPYRRGCIAITGCAR 114
           NPY RGC AIT C R
Sbjct: 111 NPYSRGCSAITRCRR 116

[Close]
BLAST of Csa6G199790 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.2e-64
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
           AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD
Sbjct: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]
BLAST of Csa6G199790 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.7e-38
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 1 

Query: 5   LCL-LLLVAAIAITLPVALCD-WTRAYGN-PDYAFWGTAEPATINDVDDSRRLLFQYGFA 64
           LCL LLL+A +A  L +AL D WTR+Y + PDY F         N  +DSRRLLFQYGFA
Sbjct: 6   LCLFLLLIAVVAAPLCLALSDDWTRSYADVPDYDF--------TNSNEDSRRLLFQYGFA 65

Query: 65  YKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
           YKYPKNKYLGYDALRKNN PCRHRG SYYDC KR+KANPYRRGCIAITGCARFTD
Sbjct: 66  YKYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFTD 112

[Close]
BLAST of Csa6G199790 vs. TrEMBL
Match: A0A078FS15_BRANA (BnaA07g08550D protein OS=Brassica napus GN=BnaA07g08550D PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-14
Identity = 49/116 (42.24%), Postives = 64/116 (55.17%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           +KL L   LL+ A+  T   A    T++  N         E  ++ D + +RR L +   
Sbjct: 4   VKLLLIFGLLILAMVATSVNATYPLTKSCINGQGCIGDDDELESLMDSETNRRQLAR--- 63

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
                  +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C RF +
Sbjct: 64  -----GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRFLE 111

[Close]
BLAST of Csa6G199790 vs. TrEMBL
Match: A0A0D3D6A7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           +KL L +  L+ A+  T   A    T++  N         E  ++ D + +RR L +   
Sbjct: 4   VKLLLIVGFLILAMVATSVNATYPLTKSCINGQGCIGDDDELESLMDSETNRRQLAR--- 63

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARF 115
                  +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C R+
Sbjct: 64  -----GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 109

[Close]
BLAST of Csa6G199790 vs. TrEMBL
Match: A0A078E5A8_BRANA (BnaC07g10600D protein OS=Brassica napus GN=BnaC07g10600D PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           +KL L +  L+ A+  T   A    T++  N         E  ++ D + +RR L +   
Sbjct: 4   VKLLLIVGFLILAMVATSVNATYPLTKSCINGQGCIGDDDELESLMDSETNRRQLAR--- 63

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARF 115
                  +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C R+
Sbjct: 64  -----GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 109

[Close]
BLAST of Csa6G199790 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 81.6 bits (200), Expect = 3.4e-16
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1 

Query: 4   GLCLLLLVA-AIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAY 63
           GL +L +VA ++  T P+     T++  N         E  ++ D + +RR L +     
Sbjct: 10  GLLILAMVAKSVNATYPL-----TKSCINGQGCIGEDDELESLMDSETNRRQLAR----- 69

Query: 64  KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARF 115
                +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C R+
Sbjct: 70  ---GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of Csa6G199790 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 78.2 bits (191), Expect = 3.8e-15
Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWT--RAYGNPDYAFWGTAEPATINDVDDSRRLLFQY 60
           M + + L+L +  +A+    A   WT  ++  N         E   + D + +RR L   
Sbjct: 1   MGIKILLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAA- 60

Query: 61  GFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116
                  +  Y+ Y ALRKNN PC  RG SYYDC KR++ANPYRRGC  IT C R T
Sbjct: 61  -------RRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]
BLAST of Csa6G199790 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 67.8 bits (164), Expect = 5.1e-12
Identity = 37/96 (38.54%), Postives = 49/96 (51.04%), Query Frame = 1 

Query: 20  VALCDWTRAYGNPDYAFWGTAEPATINDVDD--SRRLLFQYGFAYKYPKNKYLGYDALRK 79
           +A C  + A G+    F+G  E     ++D   +RR+L            +Y+ Y ALR+
Sbjct: 51  IAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL---------ATRRYISYGALRR 110

Query: 80  NNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR 114
           N  PC  RG SYY+C +  +ANPY RGC AIT C R
Sbjct: 111 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of Csa6G199790 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1 

Query: 47  DVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCI 106
           D D SRR+L Q          KY+ Y A+R+N+ PC  RG SYY+C +  +ANPY RGC 
Sbjct: 62  DSDISRRILAQ---------KKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCS 119

Query: 107 AITGCAR 114
            IT C R
Sbjct: 122 TITRCRR 119

[Close]
BLAST of Csa6G199790 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 1 

Query: 39  TAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKA 98
           TAE     D + +RR+L            KY+ Y ALR+N  PC  RG SYY+C +  +A
Sbjct: 51  TAEEEFEMDSEINRRIL---------ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQA 110

Query: 99  NPYRRGCIAITGCAR 114
           NPY RGC AIT C R
Sbjct: 111 NPYSRGCSAITRCRR 116

[Close]
BLAST of Csa6G199790 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 3.2e-64
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
           AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD
Sbjct: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]
BLAST of Csa6G199790 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 6.0e-39
Identity = 86/117 (73.50%), Postives = 93/117 (79.49%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCD-WTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYG 60
           MKLGL  LL++A +A  L +A  D WT AY  P+Y F       T N+ +DSRRLLFQYG
Sbjct: 4   MKLGL-FLLVIAVVAAPLCLAFSDDWTHAYAAPNYDF-------TTNN-EDSRRLLFQYG 63

Query: 61  FAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
           FAYKYPKNKYLGYDALRKNNSPCRHRG SYYDC KRRKANPYRRGCIAITGCARFTD
Sbjct: 64  FAYKYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFTD 111

[Close]
BLAST of Csa6G199790 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-38
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 1 

Query: 5   LCL-LLLVAAIAITLPVALCD-WTRAYGN-PDYAFWGTAEPATINDVDDSRRLLFQYGFA 64
           LCL LLL+A +A  L +AL D WTR+Y + PDY F         N  +DSRRLLFQYGFA
Sbjct: 6   LCLFLLLIAVVAAPLCLALSDDWTRSYADVPDYDF--------TNSNEDSRRLLFQYGFA 65

Query: 65  YKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
           YKYPKNKYLGYDALRKNN PCRHRG SYYDC KR+KANPYRRGCIAITGCARFTD
Sbjct: 66  YKYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFTD 112

[Close]
BLAST of Csa6G199790 vs. NCBI nr
Match: gi|674917517|emb|CDY15684.1| (BnaA07g08550D [Brassica napus])

HSP 1 Score: 86.3 bits (212), Expect = 3.9e-14
Identity = 49/116 (42.24%), Postives = 64/116 (55.17%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           +KL L   LL+ A+  T   A    T++  N         E  ++ D + +RR L +   
Sbjct: 4   VKLLLIFGLLILAMVATSVNATYPLTKSCINGQGCIGDDDELESLMDSETNRRQLAR--- 63

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 117
                  +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C RF +
Sbjct: 64  -----GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRFLE 111

[Close]
BLAST of Csa6G199790 vs. NCBI nr
Match: gi|685329751|ref|XP_009102923.1| (PREDICTED: protein RALF-like 4 [Brassica rapa])

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-13
Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 1 

Query: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGF 60
           +KL L   LL+ A+  T   A    T++  N         E  ++ D + +RR L +   
Sbjct: 4   VKLLLIFGLLILAMVATSVNATYPLTKSCINGQGCIGDDDELESLMDSETNRRQLAR--- 63

Query: 61  AYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARF 115
                  +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYRRGC AIT C R+
Sbjct: 64  -----GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 109

The following BLAST results are available for this feature:
BLAST of Csa6G199790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF4_ARATH6.1e-1541.96Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1[more]
RLF19_ARATH6.7e-1438.46Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1[more]
RLF23_ARATH9.1e-1138.54Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
RLF22_ARATH2.6e-1047.76Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
RLF33_ARATH4.5e-1045.33Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1[more]
BLAST of Csa6G199790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCD7_CUCSA2.2e-64100.00F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1[more]
A0A0A0KHU4_CUCSA4.7e-3873.04Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1[more]
A0A078FS15_BRANA2.8e-1442.24BnaA07g08550D protein OS=Brassica napus GN=BnaA07g08550D PE=4 SV=1[more]
A0A0D3D6A7_BRAOL1.8e-1341.23Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A078E5A8_BRANA1.8e-1341.23BnaC07g10600D protein OS=Brassica napus GN=BnaC07g10600D PE=4 SV=1[more]
BLAST of Csa6G199790 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28270.13.4e-1641.96 ralf-like 4[more]
AT2G33775.13.8e-1538.46 ralf-like 19[more]
AT3G16570.15.1e-1238.54 rapid alkalinization factor 23[more]
AT3G05490.11.5e-1147.76 ralf-like 22[more]
AT4G15800.12.5e-1145.33 ralf-like 33[more]
BLAST of Csa6G199790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449466199|ref|XP_004150814.1|3.2e-64100.00PREDICTED: protein RALF-like 4 [Cucumis sativus][more]
gi|659080853|ref|XP_008441015.1|6.0e-3973.50PREDICTED: protein RALF-like 19 [Cucumis melo][more]
gi|449461879|ref|XP_004148669.1|6.7e-3873.04PREDICTED: protein RALF-like 19 [Cucumis sativus][more]
gi|674917517|emb|CDY15684.1|3.9e-1442.24BnaA07g08550D [Brassica napus][more]
gi|685329751|ref|XP_009102923.1|1.1e-1342.11PREDICTED: protein RALF-like 4 [Brassica rapa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU092013cucumber EST collection version 3.0transcribed_cluster
CU099494cucumber EST collection version 3.0transcribed_cluster
CU152613cucumber EST collection version 3.0transcribed_cluster
CU154187cucumber EST collection version 3.0transcribed_cluster
CU172288cucumber EST collection version 3.0transcribed_cluster
CU173361cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G199790.1Csa6G199790.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU152613CU152613transcribed_cluster
CU099494CU099494transcribed_cluster
CU172288CU172288transcribed_cluster
CU092013CU092013transcribed_cluster
CU173361CU173361transcribed_cluster
CU154187CU154187transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 52..113
score: 5.9
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 67..115
score: 8.0
NoneNo IPR availablePANTHERPTHR33136:SF9PROTEIN RALF-LIKE 4coord: 67..115
score: 8.0