Bhi12G001856 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001856
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Rapid ALkalinization Factor
Location	chr12 : 64735074 .. 64735831 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATCTCCACAAATCCTTCCTTCCTCTCCCATTTATAACCCCCTTCATTTCCATCTCTATTAGGGAAACAAGGCAAGAAAAACAAATAACAACTAAAAAGGCCCCATTTTCCCCCTCGGCACCACCACCACCACTCCACAATGGGAACCATGAAGCTCTGCCTATTTCTCCTCCTCGTCGCCGCCGTCTCCCCTCTTTCCTTTGCCTATTCCGACTGGACTCACGCTTATGGTGCCCCCGAATATGCTTTCTGGGGCTCATCCACACCTACGGCAACGATCGAAGACAACCGACGGCTACTTTTTCAATATGGATTTGCTTATAAATACCCAAGAAACAGGTATTTGAGCTACGAGGCACTCAGGAAGAACAATGTCCCATGCGGCCATCGTGGTAGATCTTACTATGACTGTAATCAGCATCAGAAGGCTAACCCTTATCGTCGTGGCTGTACCGCCATCACCGGTTGCGCTCGATTCACCGATTAAATTTTTTTAGAAAATGATATATGGGATTATTGTTTTTATTTCTTGATTAAATGGGGGGTTGGTCTGATTGTTTAGTGGCTTTTTTATTTTTTTAAATCCTGATGTTTGAAATAAATTATGTTCTTTAAATGAATTGGAAATCCTAACTTGGTTCCAATTTTATTTATTTATTTCTTGATTGTAAGTCAGAGGGGTTTTAAGTGTGCTTCCTGTATGCTTTATGGACTTTGTTTTTGTTTGAAGTTTAAATAAAATTATACTTGATGTTA

mRNA sequence

TTAATCTCCACAAATCCTTCCTTCCTCTCCCATTTATAACCCCCTTCATTTCCATCTCTATTAGGGAAACAAGGCAAGAAAAACAAATAACAACTAAAAAGGCCCCATTTTCCCCCTCGGCACCACCACCACCACTCCACAATGGGAACCATGAAGCTCTGCCTATTTCTCCTCCTCGTCGCCGCCGTCTCCCCTCTTTCCTTTGCCTATTCCGACTGGACTCACGCTTATGGTGCCCCCGAATATGCTTTCTGGGGCTCATCCACACCTACGGCAACGATCGAAGACAACCGACGGCTACTTTTTCAATATGGATTTGCTTATAAATACCCAAGAAACAGGTATTTGAGCTACGAGGCACTCAGGAAGAACAATGTCCCATGCGGCCATCGTGGTAGATCTTACTATGACTGTAATCAGCATCAGAAGGCTAACCCTTATCGTCGTGGCTGTACCGCCATCACCGGTTGCGCTCGATTCACCGATTAAATTTTTTTAGAAAATGATATATGGGATTATTGTTTTTATTTCTTGATTAAATGGGGGGTTGGTCTGATTGTTTAGTGGCTTTTTTATTTTTTTAAATCCTGATGTTTGAAATAAATTATGTTCTTTAAATGAATTGGAAATCCTAACTTGGTTCCAATTTTATTTATTTATTTCTTGATTGTAAGTCAGAGGGGTTTTAAGTGTGCTTCCTGTATGCTTTATGGACTTTGTTTTTGTTTGAAGTTTAAATAAAATTATACTTGATGTTA

Coding sequence (CDS)

ATGGGAACCATGAAGCTCTGCCTATTTCTCCTCCTCGTCGCCGCCGTCTCCCCTCTTTCCTTTGCCTATTCCGACTGGACTCACGCTTATGGTGCCCCCGAATATGCTTTCTGGGGCTCATCCACACCTACGGCAACGATCGAAGACAACCGACGGCTACTTTTTCAATATGGATTTGCTTATAAATACCCAAGAAACAGGTATTTGAGCTACGAGGCACTCAGGAAGAACAATGTCCCATGCGGCCATCGTGGTAGATCTTACTATGACTGTAATCAGCATCAGAAGGCTAACCCTTATCGTCGTGGCTGTACCGCCATCACCGGTTGCGCTCGATTCACCGATTAA

Protein sequence

MGTMKLCLFLLLVAAVSPLSFAYSDWTHAYGAPEYAFWGSSTPTATIEDNRRLLFQYGFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD

Homology

[Close]

BLAST of Bhi12G001856 vs. Swiss-Prot
Match: sp|Q6NME6|RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 65  RNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFT 115
           R  Y+SY ALRKNNVPC  RGRSYYDC + ++ANPYRRGC+ IT C R T
Sbjct: 60  RRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of Bhi12G001856 vs. Swiss-Prot
Match: sp|Q9FZA0|RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.7e-14
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 67  RYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARF 114
           RY+ Y+AL+KNNVPC  RGRSYYDC + ++ NPYRRGC+AIT C R+
Sbjct: 62  RYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of Bhi12G001856 vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 48  EDNRRLLFQYGFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAI 107
           E NRR+L            RY+SY ALR+N +PC  RG SYY+C +  +ANPY RGC+AI
Sbjct: 82  EINRRIL---------ATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 137

Query: 108 TGCAR 113
           T C R
Sbjct: 142 TRCRR 137

[Close]

BLAST of Bhi12G001856 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 48  EDNRRLLFQYGFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAI 107
           E NRR+L            +Y+SY ALR+N VPC  RG SYY+C +  +ANPY RGC+AI
Sbjct: 61  EINRRIL---------ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAI 116

Query: 108 TGCAR 113
           T C R
Sbjct: 121 TRCRR 116

[Close]

BLAST of Bhi12G001856 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.1e-11
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 48  EDNRRLLFQYGFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAI 107
           E NRR+L            +Y+SY AL+KN+VPC  RG SYY+C    +ANPY RGC+AI
Sbjct: 60  ESNRRIL---------ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAI 113

Query: 108 TGC 111
           T C
Sbjct: 120 TRC 113

[Close]

BLAST of Bhi12G001856 vs. TAIR10
Match: AT2G33775.1 (ralf-like 19)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-15
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 65  RNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFT 115
           R  Y+SY ALRKNNVPC  RGRSYYDC + ++ANPYRRGC+ IT C R T
Sbjct: 60  RRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of Bhi12G001856 vs. TAIR10
Match: AT1G28270.1 (ralf-like 4)

HSP 1 Score: 78.2 bits (191), Expect = 3.7e-15
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 67  RYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARF 114
           RY+ Y+AL+KNNVPC  RGRSYYDC + ++ NPYRRGC+AIT C R+
Sbjct: 62  RYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of Bhi12G001856 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23)

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-12
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 48  EDNRRLLFQYGFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAI 107
           E NRR+L            RY+SY ALR+N +PC  RG SYY+C +  +ANPY RGC+AI
Sbjct: 82  EINRRIL---------ATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 137

Query: 108 TGCAR 113
           T C R
Sbjct: 142 TRCRR 137

[Close]

BLAST of Bhi12G001856 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 68.6 bits (166), Expect = 3.0e-12
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 48  EDNRRLLFQYGFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAI 107
           E NRR+L            +Y+SY ALR+N VPC  RG SYY+C +  +ANPY RGC+AI
Sbjct: 61  EINRRIL---------ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAI 116

Query: 108 TGCAR 113
           T C R
Sbjct: 121 TRCRR 116

[Close]

BLAST of Bhi12G001856 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 65  RNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCAR 113
           + +Y+SY A+R+N+VPC  RG SYY+C +  +ANPY RGC+ IT C R
Sbjct: 72  QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of Bhi12G001856 vs. TrEMBL
Match: tr|A0A0A0KCD7|A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus OX=3659 GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.5e-38
Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 6   LCLFLLLVAAVSPLSFAYSDWTHAYGAPEYAFWGSSTPTA--TIEDNRRLLFQYGFAYKY 65
           LCL LL+ A    L  A  DWT AYG P+YAFWG++ P     ++D+RRLLFQYGFAYKY
Sbjct: 5   LCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKY 64

Query: 66  PRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           P+N+YL Y+ALRKNN PC HRG SYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 65  PKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of Bhi12G001856 vs. TrEMBL
Match: tr|A0A1S4E1Z3|A0A1S4E1Z3_CUCME (protein RALF-like 4 OS=Cucumis melo OX=3656 GN=LOC107991607 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-37
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 4   MKLCLFLLLVAA--VSPLSFAYSDWTHAYGAPEYAFWGSSTPTA--TIEDNRRLLFQYGF 63
           MKLCL LLL+ A   + L  A  DWT A+G PEYAFWG+S P     ++D+RRLLFQYGF
Sbjct: 1   MKLCLCLLLLVAAFAATLPVALCDWTRAFGNPEYAFWGNSAPATINDVDDSRRLLFQYGF 60

Query: 64  AYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           AYKYP+N+YL Y+ALRKNN PC  RG SYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 61  AYKYPKNKYLGYDALRKNNSPCRRRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of Bhi12G001856 vs. TrEMBL
Match: tr|A0A1S3B2H7|A0A1S3B2H7_CUCME (protein RALF-like 19 OS=Cucumis melo OX=3656 GN=LOC103485256 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.5e-37
Identity = 81/117 (69.23%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MGTMKLCLFLLLVAAV-SPLSFAYS-DWTHAYGAPEYAFWGSSTPTATIEDNRRLLFQYG 60
           M +MKL LFLL++A V +PL  A+S DWTHAY AP Y F      T   ED+RRLLFQYG
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAAPNYDF------TTNNEDSRRLLFQYG 60

Query: 61  FAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           FAYKYP+N+YL Y+ALRKNN PC HRGRSYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 61  FAYKYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFTD 111

[Close]

BLAST of Bhi12G001856 vs. TrEMBL
Match: tr|A0A0A0KHU4|A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-35
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 1   MGTMKLCLFLLLVAAV-SPLSFAYS-DWTHAYG-APEYAFWGSSTPTATIEDNRRLLFQY 60
           M + KLCLFLLL+A V +PL  A S DWT +Y   P+Y F  S+      ED+RRLLFQY
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYADVPDYDFTNSN------EDSRRLLFQY 60

Query: 61  GFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           GFAYKYP+N+YL Y+ALRKNN+PC HRGRSYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 61  GFAYKYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFTD 112

[Close]

BLAST of Bhi12G001856 vs. TrEMBL
Match: tr|I1MEK2|I1MEK2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G075300 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.2e-13
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 65  RNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFT 115
           R RY+SY ALR N VPCG RGRSYY+CNQ  +ANPY RGCTAIT CAR T
Sbjct: 74  RARYISYAALRSNQVPCGRRGRSYYNCNQRGRANPYNRGCTAITHCARDT 123

[Close]

BLAST of Bhi12G001856 vs. NCBI nr
Match: XP_004150814.1 (PREDICTED: protein RALF-like 4 [Cucumis sativus] >KGN47203.1 F3H9.8 protein [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 9.8e-38
Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 6   LCLFLLLVAAVSPLSFAYSDWTHAYGAPEYAFWGSSTPTA--TIEDNRRLLFQYGFAYKY 65
           LCL LL+ A    L  A  DWT AYG P+YAFWG++ P     ++D+RRLLFQYGFAYKY
Sbjct: 5   LCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKY 64

Query: 66  PRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           P+N+YL Y+ALRKNN PC HRG SYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 65  PKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of Bhi12G001856 vs. NCBI nr
Match: XP_016902249.1 (PREDICTED: protein RALF-like 4 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 4   MKLCLFLLLVAA--VSPLSFAYSDWTHAYGAPEYAFWGSSTPTA--TIEDNRRLLFQYGF 63
           MKLCL LLL+ A   + L  A  DWT A+G PEYAFWG+S P     ++D+RRLLFQYGF
Sbjct: 1   MKLCLCLLLLVAAFAATLPVALCDWTRAFGNPEYAFWGNSAPATINDVDDSRRLLFQYGF 60

Query: 64  AYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           AYKYP+N+YL Y+ALRKNN PC  RG SYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 61  AYKYPKNKYLGYDALRKNNSPCRRRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of Bhi12G001856 vs. NCBI nr
Match: XP_008441015.1 (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 8.3e-37
Identity = 81/117 (69.23%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MGTMKLCLFLLLVAAV-SPLSFAYS-DWTHAYGAPEYAFWGSSTPTATIEDNRRLLFQYG 60
           M +MKL LFLL++A V +PL  A+S DWTHAY AP Y F      T   ED+RRLLFQYG
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAAPNYDF------TTNNEDSRRLLFQYG 60

Query: 61  FAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           FAYKYP+N+YL Y+ALRKNN PC HRGRSYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 61  FAYKYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFTD 111

[Close]

BLAST of Bhi12G001856 vs. NCBI nr
Match: XP_004148669.1 (PREDICTED: protein RALF-like 19 [Cucumis sativus] >KGN48379.1 hypothetical protein Csa_6G484570 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-35
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 1   MGTMKLCLFLLLVAAV-SPLSFAYS-DWTHAYG-APEYAFWGSSTPTATIEDNRRLLFQY 60
           M + KLCLFLLL+A V +PL  A S DWT +Y   P+Y F  S+      ED+RRLLFQY
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYADVPDYDFTNSN------EDSRRLLFQY 60

Query: 61  GFAYKYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFTD 116
           GFAYKYP+N+YL Y+ALRKNN+PC HRGRSYYDC + +KANPYRRGC AITGCARFTD
Sbjct: 61  GFAYKYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFTD 112

[Close]

BLAST of Bhi12G001856 vs. NCBI nr
Match: XP_022989014.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 74/121 (61.16%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MGTMKLCLFLLLV-AAVSPLSFAYSDWTHAYGA----PEYAFWGSSTPTATIEDNRRLLF 60
           MGTMKL +FLLLV   V PLSFA  + ++A        EY+F+G  +  A  ED+RR LF
Sbjct: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLF 60

Query: 61  QYGFAY-KYPRNRYLSYEALRKNNVPCGHRGRSYYDCNQHQKANPYRRGCTAITGCARFT 116
           QYGFAY K  R RYLSY ALR+NN+PCG RG SYYDC + +  NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 120

The following BLAST results are available for this feature:

BLAST of Bhi12G001856 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NME6\|RLF19_ARATH	3.9e-14	68.00	Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1	[more]
sp\|Q9FZA0\|RLF4_ARATH	6.7e-14	65.96	Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1	[more]
sp\|Q9LUS7\|RLF23_ARATH	3.1e-11	50.77	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
sp\|Q8L9P8\|RLF33_ARATH	5.3e-11	50.77	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
sp\|Q945T0\|RALF_TOBAC	9.1e-11	50.79	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]

BLAST of Bhi12G001856 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	2.2e-15	68.00	ralf-like 19	[more]
AT1G28270.1	3.7e-15	65.96	ralf-like 4	[more]
AT3G16570.1	1.7e-12	50.77	rapid alkalinization factor 23	[more]
AT4G15800.1	3.0e-12	50.77	ralf-like 33	[more]
AT3G05490.1	2.5e-11	54.17	ralf-like 22	[more]

BLAST of Bhi12G001856 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCD7\|A0A0A0KCD7_CUCSA	6.5e-38	66.96	F3H9.8 protein OS=Cucumis sativus OX=3659 GN=Csa_6G199790 PE=4 SV=1	[more]
tr\|A0A1S4E1Z3\|A0A1S4E1Z3_CUCME	1.1e-37	67.24	protein RALF-like 4 OS=Cucumis melo OX=3656 GN=LOC107991607 PE=4 SV=1	[more]
tr\|A0A1S3B2H7\|A0A1S3B2H7_CUCME	5.5e-37	69.23	protein RALF-like 19 OS=Cucumis melo OX=3656 GN=LOC103485256 PE=4 SV=1	[more]
tr\|A0A0A0KHU4\|A0A0A0KHU4_CUCSA	3.0e-35	66.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484570 PE=4 SV=1	[more]
tr\|I1MEK2\|I1MEK2_SOYBN	4.2e-13	74.00	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G075300 PE=4 SV=1	[more]

BLAST of Bhi12G001856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150814.1	9.8e-38	66.96	PREDICTED: protein RALF-like 4 [Cucumis sativus] >KGN47203.1 F3H9.8 protein [Cuc...	[more]
XP_016902249.1	1.7e-37	67.24	PREDICTED: protein RALF-like 4 [Cucumis melo]	[more]
XP_008441015.1	8.3e-37	69.23	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
XP_004148669.1	4.5e-35	66.95	PREDICTED: protein RALF-like 19 [Cucumis sativus] >KGN48379.1 hypothetical prote...	[more]
XP_022989014.1	1.3e-29	61.16	protein RALF-like 4 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0009987	cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0004871	signal transducer activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001856	Bhi12M001856	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 50..112 e-value: 2.7E-22 score: 79.3
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 2..114
None	No IPR available	PANTHER	PTHR33136:SF16	PROTEIN RALF-LIKE 19-RELATED	coord: 2..114

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi12G001856	Csa6G199790	Cucumber (Chinese Long) v2	cuwgoB537
Bhi12G001856	MELO3C021354	Melon (DHL92) v3.5.1	mewgoB101
Bhi12G001856	ClCG06G005350	Watermelon (Charleston Gray)	wcgwgoB493
Bhi12G001856	CSPI06G14920	Wild cucumber (PI 183967)	cpiwgoB542
Bhi12G001856	Cucsa.172090	Cucumber (Gy14) v1	cgywgoB352
Bhi12G001856	Lsi09G014030	Bottle gourd (USVL1VR-Ls)	lsiwgoB025
Bhi12G001856	CsGy6G014800	Cucumber (Gy14) v2	cgybwgoB514
Bhi12G001856	MELO3C021354.2	Melon (DHL92) v3.6.1	medwgoB102
Bhi12G001856	CsaV3_6G017390	Cucumber (Chinese Long) v3	cucwgoB554
Bhi12G001856	Cla009326	Watermelon (97103) v1	wgowmB095
Bhi12G001856	Cla97C06G114850	Watermelon (97103) v2	wgowmbB088

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001856	Cucurbita maxima (Rimu)	cmawgoB0464
Bhi12G001856	Cucurbita moschata (Rifu)	cmowgoB0462
Bhi12G001856	Cucurbita pepo (Zucchini)	cpewgoB0181
Bhi12G001856	Silver-seed gourd	carwgoB0084