Csa6G001770 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGAAGGAGTGGGTGAGAGTTGAGAGACCAACGATCTGAGGAAACTAAATTTCCACTTCACACATTAATCCTCACGACGCGATGCTTTCCTTTCTCAATTCGTCAGAACCATCGTTTTCTTCTTCTTCTTCTTCTTCTTCACTAACTTCCTCTTCCCTTCCCCGTTTAGCTCCAACTTCTCCGGCCACTACCTCCGCCGCCCTTGCCGTCGTACCTACTTTTAGAGTCCATCCTTCTCTTTCAAGTCTCGCCATCCTCACCACCAAACCAACAACTATCCCTTTCTCTTATTCTTCTACTACTTATCCTCCCAAACATTTTCGTTCTAGGTTCAGAAATTACTATTCCAATTCCGAGCCCACCTTCTCAGACAGAGACGAAAATGGCGATTACTCTGACGTCTCAGATTCTGAAACGATTTTTGATGACGGTGGTGGCTTAAGTATCCAAATCGAGAAGTTGGGTACCAACTCTCGGAGAATTTACTCGAGGATTGGTATTGATGCTCCACTCCAGGCGGTGTGGAATATCTTGACTGATTATGAAAGATTGGCTGATTTCATACCTGGTCTCGCTATCAGCCAAATACTCTTTAAGATTGACAACCATGTTCGGCTCTTTCAGGTAGTCTTTTCTCTTTATGTTCTTGATAATGTAGGAATTTGAACAGTTTAATGACTTCTGGAGCACTCTCTTTTAAGATCGGTTGTGAATGTATATATAGATCAAGGTTAAAGTACCATATCCCAGCTTAATTGTTCAATTTGATATGCTTTAACATGGTGCTTTAACAATGGATAATGGAAGCAAATTCCAACAGAGTCCGGTTAAGTACAACTGATATTAATGATTAGGTGCCAAATGTCATGACTTACGTTTATAGAGTAATCTATATTGTGAAGGGAGTGATAAGAATTTATATGAATATACCATGTGTGAGCCGTAGAGGAGTGCCTCAATTCCTCATTTCTAATGCCCAGGCACCCATAAGAACTATATGAGAACACAAAAGTAAATCACATACCTTTACTTCTTCGAAAATTTTATTTCCCCTCTCACCACAGTTGTGAAGCCTTGGATGAGTAGATTCACTCTTCTTCTTGAATGAATTAGCCATTAGGGAAGCTCCATTTAGAATCTCGTCATTGACACTTAAAAAGAATGGCGACTTGTGGCTTGGATTTCATTTGTTCTTTTGTACGGATGAAATACTTTTTCTCCTATCATGATTGCTATGTAATTGCTGGCTTCTTCGTTGTTCTCTAATGCAAGCTTCAAAATGATGTAACCAAATTGATAGTTTTTGAAGTGCACGGGATAAATCCCCACAATTTCCTTTGAAGTTTTCGAAGATTTCTTTTATCCACAAATACTAGCTTCTGATACCAATCCTCTTTGCTATCTACCCGCTCCGCTGCCTATTTCAGTCTCTCATGAGAACTCTGATGATAGAAAAGCCTCTTCCCACTCCTATGAAGGTCGAGTTTACGATTGAGCGACGATTCCGTGTCGTCTCTCTTTACCTTGCTGCCGGTTTTTGGTATAATATGTGACTTTGGGGTCTCGTCAACTCATCTGGAGCTTGATTTTTTAGCGAGCAGATATTGAAATGTTACTAGGTACTGTATCCTATTTCTTATGCCTAGAATCTCATCTTTCCAACTGCTTCTTGGTGATGTTATAGATACTGCCCCATAATCTTATAGCCAGCAGCCCCAAAAACTGAAAAGATCGCTTTATGCCATTGCCCTATAATCTGATAGCCAGCAGCCCCAAAATCTGGGATGATATCCATATGCCACGGCCAAGGGTCCCTGAAAATCTATTATGAAATATCACTAACTTGTTCTCGATTGAATCGCCTGCAAATTTGGGGTCAGGGCCAATACTACTGTTTGGAATGATTCTTGGCTTCTAAATGATCCTTTGCCAGTGCCACACGTCCTCTCTCTCGATTCAAATAAATGTGGGATTTGAATGCAAAAACTTGGAATTTTTCTGAGAAGGAACCTCAGAGATGTTGAAATTGAGGAAGGGTCTACCTTTTTTCTCCATATGGCATATCTCCTCCCTTTGGTTTAGTACTTCCCTTGACACAATTCTTTGAAAGCTGGTAACAAAGGACCTATTTTGCAGCAACTCTCTATTTGTCAACACATCATACAACTATCCAAATTCCTATTGGCTGGCAAATTGCAAGAAACCCATGATTTGTTCCTCTGCCCCCTCTGCTTTTGTGAATTTTGTCAAATATGTGAATGGAATTAGTATCTCCACTTGCTTGTAATTTCGATTGAGGATGCCGTACGTTAAGACCATTGAGTTGTGACTTAATCCTCTTCTGTTAGCGATTGTTGCTAATGCATTTTTATGTACAATATTGTTTTCCTGAATTTGAGGCTATTTTTGCCTTTCTTCATGTGTATTAAGCATGCTTTGGCATCCCTTATATAGGTTGGAGAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTCGAAAGACTTCCTTTCGGTAAAAGACGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGGGAATGGTCAATTGAGCAGGTAATTTTCCTCTGCATAGATCAACATTTTTCTATTAGAAGTAATTATATCAGTGGGTTCTCTACATCTCTCAACCCTTTTATTGAACATCAATTCCACAAACCATGAATTTCATAACTGCGTAGATTAAATGGCACTCACTTATGTCAATGCAGTTTGGTGAAGACGATGATAGCTTTCAAGATCAAGAAATACATTCAACTTTGTCATATAGTGTTGATGTAAAGCCAAAGCTTCTATTGCCCGTTCGACTTCTTGAGGGGCGGCTTTGTGGTGAGATAAAGGCTAACCTAGTGTGTATTCGAGAAGAAGTACATAAAACCAATTCAACTACCCCCTAATGGATGGATTCGATTCTTCCCCACATTTATATAATGCAATGTTATAAATTCCTTTGATCAAATTCCTGCCCAAGGCAGCATTGGATTTGTCATCATTGTCCAACACAGACAAATGGCTATACTATTTTCTTTCATCATTTATTTTCACTTCGACCTCAAATAACCTCAATTAACTGTAGCTAGAGTGCAT ATGCTTTCCTTTCTCAATTCGTCAGAACCATCGTTTTCTTCTTCTTCTTCTTCTTCTTCACTAACTTCCTCTTCCCTTCCCCGTTTAGCTCCAACTTCTCCGGCCACTACCTCCGCCGCCCTTGCCGTCGTACCTACTTTTAGAGTCCATCCTTCTCTTTCAAGTCTCGCCATCCTCACCACCAAACCAACAACTATCCCTTTCTCTTATTCTTCTACTACTTATCCTCCCAAACATTTTCGTTCTAGGTTCAGAAATTACTATTCCAATTCCGAGCCCACCTTCTCAGACAGAGACGAAAATGGCGATTACTCTGACGTCTCAGATTCTGAAACGATTTTTGATGACGGTGGTGGCTTAAGTATCCAAATCGAGAAGTTGGGTACCAACTCTCGGAGAATTTACTCGAGGATTGGTATTGATGCTCCACTCCAGGCGGTGTGGAATATCTTGACTGATTATGAAAGATTGGCTGATTTCATACCTGGTCTCGCTATCAGCCAAATACTCTTTAAGATTGACAACCATGTTCGGCTCTTTCAGGTTGGAGAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTCGAAAGACTTCCTTTCGGTAAAAGACGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGGGAATGGTCAATTGAGCAGTTTGGTGAAGACGATGATAGCTTTCAAGATCAAGAAATACATTCAACTTTGTCATATAGTGTTGATGTAAAGCCAAAGCTTCTATTGCCCGTTCGACTTCTTGAGGGGCGGCTTTGTGGTGAGATAAAGGCTAACCTAGTGTGTATTCGAGAAGAAGTACATAAAACCAATTCAACTACCCCCTAA ATGCTTTCCTTTCTCAATTCGTCAGAACCATCGTTTTCTTCTTCTTCTTCTTCTTCTTCACTAACTTCCTCTTCCCTTCCCCGTTTAGCTCCAACTTCTCCGGCCACTACCTCCGCCGCCCTTGCCGTCGTACCTACTTTTAGAGTCCATCCTTCTCTTTCAAGTCTCGCCATCCTCACCACCAAACCAACAACTATCCCTTTCTCTTATTCTTCTACTACTTATCCTCCCAAACATTTTCGTTCTAGGTTCAGAAATTACTATTCCAATTCCGAGCCCACCTTCTCAGACAGAGACGAAAATGGCGATTACTCTGACGTCTCAGATTCTGAAACGATTTTTGATGACGGTGGTGGCTTAAGTATCCAAATCGAGAAGTTGGGTACCAACTCTCGGAGAATTTACTCGAGGATTGGTATTGATGCTCCACTCCAGGCGGTGTGGAATATCTTGACTGATTATGAAAGATTGGCTGATTTCATACCTGGTCTCGCTATCAGCCAAATACTCTTTAAGATTGACAACCATGTTCGGCTCTTTCAGGTTGGAGAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTCGAAAGACTTCCTTTCGGTAAAAGACGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGGGAATGGTCAATTGAGCAGTTTGGTGAAGACGATGATAGCTTTCAAGATCAAGAAATACATTCAACTTTGTCATATAGTGTTGATGTAAAGCCAAAGCTTCTATTGCCCGTTCGACTTCTTGAGGGGCGGCTTTGTGGTGAGATAAAGGCTAACCTAGTGTGTATTCGAGAAGAAGTACATAAAACCAATTCAACTACCCCCTAA MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGLSIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGEDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP*
BLAST of Csa6G001770 vs. TrEMBL
Match: A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001770 PE=4 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 7.9e-167 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Csa6G001770 vs. TrEMBL
Match: A0A067HFI2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022784mg PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.5e-64 Identity = 142/282 (50.35%), Postives = 184/282 (65.25%), Query Frame = 1
BLAST of Csa6G001770 vs. TrEMBL
Match: V4U6T6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021459mg PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.5e-64 Identity = 142/282 (50.35%), Postives = 184/282 (65.25%), Query Frame = 1
BLAST of Csa6G001770 vs. TrEMBL
Match: M5X9F1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017230mg PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63 Identity = 138/285 (48.42%), Postives = 190/285 (66.67%), Query Frame = 1
BLAST of Csa6G001770 vs. TrEMBL
Match: I1LAW0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G139600 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 5.3e-62 Identity = 141/276 (51.09%), Postives = 179/276 (64.86%), Query Frame = 1
BLAST of Csa6G001770 vs. TAIR10
Match: AT4G01650.1 (AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein) HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58 Identity = 123/238 (51.68%), Postives = 163/238 (68.49%), Query Frame = 1
BLAST of Csa6G001770 vs. TAIR10
Match: AT5G08720.1 (AT5G08720.1 Streptomyces cyclase/dehydrase (InterPro:IPR005031)) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17 Identity = 63/194 (32.47%), Postives = 93/194 (47.94%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 2.3e-16 Identity = 50/157 (31.85%), Postives = 84/157 (53.50%), Query Frame = 1
BLAST of Csa6G001770 vs. NCBI nr
Match: gi|778709027|ref|XP_004138514.2| (PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus]) HSP 1 Score: 594.3 bits (1531), Expect = 1.1e-166 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Csa6G001770 vs. NCBI nr
Match: gi|659116819|ref|XP_008458275.1| (PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo]) HSP 1 Score: 551.6 bits (1420), Expect = 8.5e-154 Identity = 276/297 (92.93%), Postives = 284/297 (95.62%), Query Frame = 1
BLAST of Csa6G001770 vs. NCBI nr
Match: gi|1009148245|ref|XP_015891833.1| (PREDICTED: uncharacterized protein LOC107426226 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 264.2 bits (674), Expect = 2.7e-67 Identity = 150/266 (56.39%), Postives = 180/266 (67.67%), Query Frame = 1
BLAST of Csa6G001770 vs. NCBI nr
Match: gi|645242932|ref|XP_008227754.1| (PREDICTED: uncharacterized protein LOC103327240 isoform X1 [Prunus mume]) HSP 1 Score: 256.5 bits (654), Expect = 5.6e-65 Identity = 137/297 (46.13%), Postives = 188/297 (63.30%), Query Frame = 1
BLAST of Csa6G001770 vs. NCBI nr
Match: gi|645242939|ref|XP_008227757.1| (PREDICTED: uncharacterized protein LOC103327240 isoform X2 [Prunus mume]) HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64 Identity = 136/277 (49.10%), Postives = 182/277 (65.70%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |