Cp4.1LG12g03510 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g03510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Polyketide cyclase / dehydrase and lipid transport protein
Location	Cp4.1LG12 : 2418163 .. 2423040 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTTTCGTTTCTCAATTCATCAGACCCAACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCTCGTTTGCCTCCCGCATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGACCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCAGAACCAAATCAAGTAACCTTTTCTCAGATTCTACCTATCCTGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTACTCGAGAATTGGTATTGACGCCTCACTTCAGGCTGTGTGGAATATCCTGACGGATTATGAGAAATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTAGTTTTTATTCTTCTTCTTTACCGCCCCTTTCCCTCCGTATGTTCTTCAGGAATTTGAACACACTTAACGATTTCTGGAGCGCTCGATTTCCATCTTTCTGTTTCTCTGTACGCCTATCGTGGTTATGAATATAACACAAAATGTTAGATATACTATAGCTGGGCTACGACACGCTGAGGGAGTCGTTGACTAATTTAGAGAATGATCATTGGTTTGTAAGTGAGGAATACTATTTCCATTGGTACGAGGGGTCTTTTTGGAGAAGTCCAAAGCAAACCTATGAGAGCTTATGCTCAAAGTGGATAATATCATATCATTTTGGAGATTCGTGATTCATAGCATGGTATCAGAATCATTCCTTAAACCTAACCATGTCAATAGAATCCTCAAATATCTAACAAAGAAGTGAGCCTCAAAGGTATAGTCAAAAGTGACTCAAGTACTGAACAAAGAGTGTAATTTGTTCGAGGACTCCATAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGCTCTATAGGCTTCAGGAGAGGCTCTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAGGGAGTCCTACCTTGGCTAATTTAGAGAATGATCATAAGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAGTCCAAAGCAAAGCTCGAGAGCTTTGACAATATCAAATCCATTATTCTTAGTACTCAAGTGTTTGAACTTGTACAATGTCAATTTGAAGGATTCAAATTCAACAGGGTGAGGTTATTTCCAACTGATATTGATGATTTTGTGCAAAATACCATGAATTATGTTAATTTAGTAAGCCATATTGTGAAGTGCGTGGTAAGAATTTATATTAATTTTCCATGTGAGGAGAGTGCTGCTAGCCCACATTTCTAATTCCTTGGTGTCCGTAAGAACTATATTAGAACCCAAAAGTAAATCCTATCCATTTCCTTCTTGGAAGATTTAACTTCGCTTCTCACCAGATGTTCTGAAGCCTGAATGTGTAGTTCGCCCTTCTTGAATGAATTAGGGAAGCTCCATTTTTTTAGGGGAAGAATCTCCTCTTTGACTCTTACATATGTTCTTATGAGACATCCACAAAAAGAAGTAATGTCTTTGGTTGACATTTATTTGGGCCTTCTTTTGGAAGTTCTGGGAAGAAAGCAATCAGCAAATCTGTAGGGACAAGGAATTTACTTCTGATTGATTTCTTGATGCTATGGTATTTCTTATGGCTTCTTGGTGTCAGTGCTCACTCATTTTTCTTCACTATAGCTTTTCCTCTTTACTATCCAATTAGAGAGGTTTTTCGTAACTCCCTTGGATCAGGGTTATTCTCTTCTTTTGTAATTTCATATTATCAATGAATTTAAAGGAATTTTTGGATAAGGCTTGACGTGCCACCCTTCAAGAATGGAAAAGCTCTATTATAAAAAAACCTCATTAAGGCTTTCTTTCGGAATCTGTGGAAAGAAAGAAATTTAGAGAATATTTATAGAAAAGACACAGAGCTACACAAAACTGTTCGACAATATTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCGTTGCAAATTGAGAAAGTCTTTTGTAAATACTATGGATTATACATCCTTTTTATAAATTTCAATCATCAATGAAATTGTCTCTTAAAAGAGTCCTCAATTTGTAAGCTCTCTCTTGTAACTATACTCAGCCCCTTGCCTGTCCCCAAGCAAATTACGTGGATGTAATGATGGATTTGACAGAGGGTCTCCCAAAATCGTATGGATATGTTGAGGACAAGGTGACTAAATACAGACATATTCTCCCGGTGTTACTCTGTTTGCCAAAGAAATTGTGCGCTGCCATTGGTTTCCCAGACCCATTGTTTCCAACAGGGAAAAGGAGTTTGTCAGCTACTTTTTAATTGAATAATTCCGTTTACAAGACACTCAACTGCAGTAAAGTATGACGTCCACCCACAGATAGATGGGCAACCTAAAATTATGAACAAATGTCTTGAAGCCTATCTGCATTGCTTCTGCTATGAGAAACCAGAGCAGTGGAGTTTTAGGCTACCACGTGCTGAATTTTGGTACGATACAATCCCATTGTAGGCAGTTCATGGCTGTTCACCATTTCTTTGGTTTTTACGGTGGATGAGACTACCAATGACAAAGTTAAGTCGCACTTAAGGTTTTTATGGTGGATGAGACTACAGATGACAAAGTTAAGTCGCACTTAAAGATGTTCATTTAATTCGTGGGAAATCCTCATTTAGATGGGGAGAGAGCGGGAAGATAATCTTCTCTATTAGCTAAATGGGGTTAGGGCGGGGATTATTCCCATCCCCCGCCTACCTTGCTTCTTATTTATATATATATACATACATACATACAAGTTCCCTGCGAAAATAAATGGGGAAGTTTGTGTGGAAGGAAATTGAAATAGGAGACAGGGATGAAGAAGACTTCCTTGTTCCCGACCCACCTTATGGACACAATACGTTCTCTGTTCTTAAGCTCCATTCGACGATAGAACAAGAGTGAATGAAAACATTTGTTGATTTGCTTCACCATGAAGTGAACTACGAAGTGGAAGTCTTAGTATTTCTAGAAATCTGCCCTATTGCTAGCGTTCTTTAGCCACCAAATGCAATGAAAGGCTTAATCCAACTTCCTAAGCCCCTTTAATCTACTGCGAAGGGTTGAGGGTGTTGCTTATAAGTTGGACATTCCTCCACTTGATCACGTCATGTTTGTAGCTCAAACGTTCCCTTGGGGCTGGGGTCAGTGCTCAGGCTTCCCCTCTTCGCAAAGTCGAGTGGTCGTTAAACCACCCAAGGTCTTTTGTGTGTGGAGGAACACCGAGACTGCTGGTTTGGAGATTCTGTTTCGCTAGAAGGCTCTTGAATTTAAAGGCATGTCGAATTGATATCAACTGCAAGCAATTCCCAGATACCTTAGGGACAAGGTGTCTTTTGGTCTGGAGCAAAGGTTAAACCCCTAATTACCAACGTTTACACAAGGAGTAATAAGGGAAGGGCAAAATGAGCCAGCCTTCTCGAATGGGCTATGTGCAATTTTGTATTGTGCGTTCAGCTCTAATCTTCTGTAGGAATGTGCAATTTTGTATTGTGTATTCAGTCCTTAGTTTCTATATTTTAGTGTAATTTTTTTACCTCTGTCTGGAACATTGAATTCCATGTGGTCAACTTTAGTTTACTGCCAGTACGCTCTATTGCTTGACAAATTGTAAGAAACCCTTGTTTGTGCTCTTGCCTCCTACTTTCATATATGTGAAATATGTGAATGATTTAGTATATCAAAGGGTAAAGGGCTTTTTCAGCTGGTGTGTAGGAGTGCACTTATGTTTTCCCTTTTACTAGACTAGTGGTGAGGTCCCGTGGTTTCTATACCGCTGCGTTTCCTGTTCCTTTTCTTTTAGTGCTTCGACCCAAATCAATAGCTTCTAGCTAGTTCAGTGGATAAGATAGCTACACTCCTGCTCACTCAAGAATGAGACGGTAATGGTCCGCCAATAAGTTTGTTCTGATTTTGGATGCAGTACATTGGAATCCTGAAGCGCCACCACGAACGCTACCACGCATTCATCTTCGTGAAGTACTCAATATTGTTTTCCTCAAAATTGAAGCCGTTTATTTTATGCTATTTGAAGTGAGAAGTATGATTCAATCCTATGCAATTTTGGCACCACACCTTCACATTGCTTTTCTTCATACCTAGTAACATGCTTTGACATTCTCTCAATAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGACCTCGAAATTCTTCCTTCGGGTAGAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGGTAATCATCCTTTGCATAGATCAATACATTTCTATTAGAAGGCATTTACCTTTCATGTAACAATCACTATCAATTCAGTAGATTTCCCTACATTTCTCTTAATCCTTTTAGTTCTAATTAAAACATTACTAACCATTAATTTCGTAACTTGGTTATGTTGATGCAGTTTGATGAAGATAGACTCGAAGACGATGGTAACTCGCAAGATCAAGATGTAAATACAATTCTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGACTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGGGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA

mRNA sequence

ATGATGCTTTCGTTTCTCAATTCATCAGACCCAACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCTCGTTTGCCTCCCGCATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGACCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCAGAACCAAATCAAGTAACCTTTTCTCAGATTCTACCTATCCTGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTACTCGAGAATTGGTATTGACGCCTCACTTCAGGCTGTGTGGAATATCCTGACGGATTATGAGAAATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGACCTCGAAATTCTTCCTTCGGGTAGAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGTTTGATGAAGATAGACTCGAAGACGATGGTAACTCGCAAGATCAAGATGTAAATACAATTCTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGACTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGGGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA

Coding sequence (CDS)

ATGATGCTTTCGTTTCTCAATTCATCAGACCCAACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCTCGTTTGCCTCCCGCATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGACCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCAGAACCAAATCAAGTAACCTTTTCTCAGATTCTACCTATCCTGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTACTCGAGAATTGGTATTGACGCCTCACTTCAGGCTGTGTGGAATATCCTGACGGATTATGAGAAATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGACCTCGAAATTCTTCCTTCGGGTAGAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGTTTGATGAAGATAGACTCGAAGACGATGGTAACTCGCAAGATCAAGATGTAAATACAATTCTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGACTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGGGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA

Protein sequence

MMLSFLNSSDPTYSSPLISCSPSRLPPAFPATASAAVAVAVNFRADPSLSRVAVSSSSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS

Homology

[Close]

BLAST of Cp4.1LG12g03510 vs. TrEMBL
Match: A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001770 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 6.8e-110
Identity = 214/301 (71.10%), Postives = 244/301 (81.06%), Query Frame = 1


Query: 2   MLSFLNSSDPTYSSP-----LISCSPSRLPPAFPATASAAVAVAVNFRADPSLSRVAVSS 61
           MLSFLNSS+P++SS      L S S  RL P  PAT SAA+AV   FR  PSLS +A+ +
Sbjct: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60

Query: 62  SSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGV 121
           +  T     +S +TYP KHFRSRFR YYSNS+P FSD D+N DYSD S+SETIF+D GG+
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 122 SIQIEKLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLF 181
           SIQIEKLG NSRRIYSRIGIDA LQAVWNILTDYE+LADFIPGLA+SQ++FK  NH RLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 182 QVGQQNLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDE 241
           QVG+QNLAFG KFNAKGTIDCYENDLE LP G+RRVIKFKMIEGDF LFEGEWSIEQF  
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG- 240

Query: 242 DRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSST 298
              EDD + QDQ++++ LSY VDVKPKL+LPVRL+EGRLC EIK NL+CIREE HKT+ST
Sbjct: 241 ---EDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNST 297

[Close]

BLAST of Cp4.1LG12g03510 vs. TrEMBL
Match: V4U6T6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021459mg PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62
Identity = 143/268 (53.36%), Postives = 176/268 (65.67%), Query Frame = 1


Query: 29  FPATASAAVAVAVNFRADPSLSRVAVSSSSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSD 88
           FP +  A  A + +    P  S    SS  +T  S L     +    F+     Y SN++
Sbjct: 18  FPISKPATTATSHSTSRFPFTS--TRSSIQKTPHSILSVSPEFNLSQFKRNGTSYCSNTN 77

Query: 89  PAFSDTDDNDDYSDASE----SETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQAVW 148
            +  D ++ DD    SE    S+T      GV I+I+KLG NSRRI S+I IDASL  VW
Sbjct: 78  SSELDIEEEDDDDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVW 137

Query: 149 NILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEI 208
           +ILTDYEKLADF+P LA+SQ++ K  N  RL+Q+GQQNLAFG KFNAKG +DCYE DLEI
Sbjct: 138 HILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEI 197

Query: 209 LPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKL 268
            PSG++R I+FKMIEGDF LFEG+WSIEQF+  + ED  +   Q   T LSY VDV+PKL
Sbjct: 198 FPSGKKRDIEFKMIEGDFQLFEGKWSIEQFNGGKFEDSESLLSQKFQTTLSYSVDVRPKL 257

Query: 269 MLPVRLIEGRLCDEIKLNLMCIREEAHK 293
            LPVRL+EGRLC+EIK NL CIRE A K
Sbjct: 258 WLPVRLVEGRLCNEIKTNLSCIREAAKK 283

[Close]

BLAST of Cp4.1LG12g03510 vs. TrEMBL
Match: A0A067HFI2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022784mg PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62
Identity = 143/268 (53.36%), Postives = 176/268 (65.67%), Query Frame = 1


Query: 29  FPATASAAVAVAVNFRADPSLSRVAVSSSSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSD 88
           FP +  A  A + +    P  S    SS  +T  S L     +    F+     Y SN++
Sbjct: 18  FPISKPATTATSHSTSRFPFTS--TRSSIQKTPHSILSVSPEFNLSQFKRNGTSYCSNTN 77

Query: 89  PAFSDTDDNDDYSDASE----SETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQAVW 148
            +  D ++ DD    SE    S+T      GV I+I+KLG NSRRI S+I IDASL  VW
Sbjct: 78  SSELDIEEEDDDDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVW 137

Query: 149 NILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEI 208
           +ILTDYEKLADF+P LA+SQ++ K  N  RL+Q+GQQNLAFG KFNAKG +DCYE DLEI
Sbjct: 138 HILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEI 197

Query: 209 LPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKL 268
            PSG++R I+FKMIEGDF LFEG+WSIEQF+  + ED  +   Q   T LSY VDV+PKL
Sbjct: 198 FPSGKKRDIEFKMIEGDFQLFEGKWSIEQFNGGKFEDSESLLSQKFQTTLSYSVDVRPKL 257

Query: 269 MLPVRLIEGRLCDEIKLNLMCIREEAHK 293
            LPVRL+EGRLC+EIK NL CIRE A K
Sbjct: 258 WLPVRLVEGRLCNEIKTNLSCIREAAKK 283

[Close]

BLAST of Cp4.1LG12g03510 vs. TrEMBL
Match: A0A058ZZ96_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00552 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-62
Identity = 126/208 (60.58%), Postives = 157/208 (75.48%), Query Frame = 1


Query: 99  DYS-----DASESETIFEDDG----GVSIQIEKLGNNSRRIYSRIGIDASLQAVWNILTD 158
           DYS     +A E E +  D+     GV I+I+K G N+RRI SRIGIDA+L  +W+ILTD
Sbjct: 68  DYSPVEGGEAEEDEGLDGDESVSGDGVFIEIKKTGKNTRRILSRIGIDATLDTIWSILTD 127

Query: 159 YEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEILPSGR 218
           YE+L+DFIPGLA+S+L+ K  N ARL+Q+GQQNLAFG KFNAKG +DCYE DLE LPSG+
Sbjct: 128 YERLSDFIPGLAVSELMEKRENFARLYQIGQQNLAFGLKFNAKGVVDCYEKDLECLPSGQ 187

Query: 219 RRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVR 278
           +R I+FKMIEGDF +FEG+WSIEQ +    ED   +  Q+  T LSY VDVKPKL LPVR
Sbjct: 188 KRDIEFKMIEGDFQVFEGKWSIEQLNIGAYEDSSPTNGQEFQTTLSYIVDVKPKLWLPVR 247

Query: 279 LIEGRLCDEIKLNLMCIREEAHKTSSTT 298
           L+EGRLC EI +NL+CIRE+A K +S +
Sbjct: 248 LVEGRLCSEITMNLLCIREQALKVNSNS 275

[Close]

BLAST of Cp4.1LG12g03510 vs. TrEMBL
Match: A0A151SS12_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003872 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.4e-60
Identity = 129/220 (58.64%), Postives = 159/220 (72.27%), Query Frame = 1


Query: 85  SNSDPAFSDTDDNDDYSDAS--------ESETIFEDDGGVSIQIEKLGNNSRRIYSRIGI 144
           S  DP   D +D+DD  D +          E + ED  GV I++ KL  NSRRI SRI I
Sbjct: 61  SKCDPTTLDDEDDDDDGDGNLLVEEGDGVEEALAED--GVYIEVTKLDKNSRRIQSRISI 120

Query: 145 DASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTID 204
           +A L ++W ILTDYEKLADFIPGLA+SQL+ K  N+ARL Q+GQQN+AFG KFNAKG +D
Sbjct: 121 EAPLSSIWTILTDYEKLADFIPGLAVSQLLQKGHNYARLLQIGQQNIAFGIKFNAKGIVD 180

Query: 205 CYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSY 264
           CYE +LE LPSG +R I FKM EGDF LFEG+WSI Q  + + E    SQ Q+V+T LSY
Sbjct: 181 CYEKELETLPSGMKREIDFKMTEGDFQLFEGKWSIWQ--KFKKESCDRSQVQEVSTTLSY 240

Query: 265 RVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSST 297
            VDVKPKL LP+RLIEGRLC+EIK+NL+ IR+EA K +++
Sbjct: 241 TVDVKPKLWLPIRLIEGRLCNEIKMNLVSIRDEAQKATNS 276

[Close]

BLAST of Cp4.1LG12g03510 vs. TAIR10
Match: AT4G01650.1 (AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein)

HSP 1 Score: 237.7 bits (605), Expect = 9.5e-63
Identity = 138/271 (50.92%), Postives = 181/271 (66.79%), Query Frame = 1


Query: 28  AFPATASAAVAVAVNFRADPSLSRVAVSSSSRTKSSNLFSDSTYPAKHFRSRFR----KY 87
           AF    +AA+A         S ++     +S + SS L + S    + F  RF     ++
Sbjct: 13  AFHHPRAAALATTSGLTNSHSPTKKYRLITSFSPSSTLLASSR---RCFTCRFGDSSPRF 72

Query: 88  YSNSDPAFSDTDDNDDY--SDASESETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQ 147
            SN D   ++TDD DDY  +D    E +  DDG V I+++KL  +SRRI S+IG++ASL 
Sbjct: 73  NSNEDETETETDDEDDYCLTDGKTEELVVGDDG-VLIELKKLEKSSRRIRSKIGMEASLD 132

Query: 148 AVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYEND 207
           +VW++LTDYEKL+DFIPGL +S+L+ K GN  RLFQ+GQQNLA G KFNAK  +DCYE +
Sbjct: 133 SVWSVLTDYEKLSDFIPGLVVSELVEKEGNRVRLFQMGQQNLALGLKFNAKAVLDCYEKE 192

Query: 208 LEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVK 267
           LE+LP GRRR I FKM+EGDF LFEG+WSIEQ D+    +  + Q +D  T L+Y VDVK
Sbjct: 193 LEVLPHGRRREIDFKMVEGDFQLFEGKWSIEQLDKGIHGEALDLQFKDFRTTLAYTVDVK 252

Query: 268 PKLMLPVRLIEGRLCDEIKLNLMCIREEAHK 293
           PK+ LPVRL+EGRLC EI+ NLM IR+ A K
Sbjct: 253 PKMWLPVRLVEGRLCKEIRTNLMSIRDAAQK 279

[Close]

BLAST of Cp4.1LG12g03510 vs. TAIR10
Match: AT5G08720.1 (AT5G08720.1 Streptomyces cyclase/dehydrase (InterPro:IPR005031))

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 1


Query: 116 VSIQIEKLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARL 175
           V  +++ +    RRI   I +D+  Q+VWN+LTDYE+LADFIP L  S  I     H   
Sbjct: 85  VRCEVDVISWRERRIRGEIWVDSDSQSVWNVLTDYERLADFIPNLVWSGRI--PCPHPGR 144

Query: 176 FQVGQQNL--AFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQ 235
             + Q+ L  A  +   A+  +D +    E L S   R + F M++GDF  FEG+WS++ 
Sbjct: 145 IWLEQRGLQRALYWHIEARVVLDLH----ECLDSPNGRELHFSMVDGDFKKFEGKWSVK- 204

Query: 236 FDEDRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHK 293
                      S  + V T+LSY V+V P+   P   +E  +  ++ +NL  +  +A K
Sbjct: 205 -----------SGIRSVGTVLSYEVNVIPRFNFPAIFLERIIRSDLPVNLRAVARQAEK 245

[Close]

BLAST of Cp4.1LG12g03510 vs. NCBI nr
Match: gi|659116819|ref|XP_008458275.1| (PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 8.5e-114
Identity = 221/302 (73.18%), Postives = 250/302 (82.78%), Query Frame = 1


Query: 2   MLSFLNSSDPTYSSP-----LISCSPSRLPPAFPATASAAVAVAVNFRADPSLSRVAVSS 61
           M SFLNSS+PTYSS      L S S SRL    PAT+SAA+AV   FR  PSLSR+A+ +
Sbjct: 1   MRSFLNSSEPTYSSSSSSSSLTSSSISRLSSTSPATSSAALAVVPTFRVHPSLSRLAILA 60

Query: 62  SSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGV 121
           +  T   + +S +TYP KHFRSRFR YYSNS+P FSD+D+N DYSD S+SETIF+D GG+
Sbjct: 61  TKSTTIPSSYSSTTYPPKHFRSRFRNYYSNSEPTFSDSDENGDYSDVSDSETIFDDGGGL 120

Query: 122 SIQIEKLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLF 181
            IQIEKLG NSRRIYSRIGIDA LQAVWNILTDYE+LADFIPGLA+SQ++FK GNHARLF
Sbjct: 121 CIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIGNHARLF 180

Query: 182 QVGQQNLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDE 241
           QVG+QNLAFGFKFNAKGTIDCYENDLE LP G+RRVIKFKMIEGDF LFEGEWSIEQF  
Sbjct: 181 QVGEQNLAFGFKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG- 240

Query: 242 DRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSST 299
              EDD + QDQ+V++ LSY VDVKPKL+LPVRL+EGRLC EIK NLMCIREE HKTSST
Sbjct: 241 ---EDDDSFQDQEVHSTLSYSVDVKPKLLLPVRLLEGRLCSEIKANLMCIREEVHKTSST 298

[Close]

BLAST of Cp4.1LG12g03510 vs. NCBI nr
Match: gi|778709027|ref|XP_004138514.2| (PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 9.8e-110
Identity = 214/301 (71.10%), Postives = 244/301 (81.06%), Query Frame = 1


Query: 2   MLSFLNSSDPTYSSP-----LISCSPSRLPPAFPATASAAVAVAVNFRADPSLSRVAVSS 61
           MLSFLNSS+P++SS      L S S  RL P  PAT SAA+AV   FR  PSLS +A+ +
Sbjct: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60

Query: 62  SSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGV 121
           +  T     +S +TYP KHFRSRFR YYSNS+P FSD D+N DYSD S+SETIF+D GG+
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 122 SIQIEKLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLF 181
           SIQIEKLG NSRRIYSRIGIDA LQAVWNILTDYE+LADFIPGLA+SQ++FK  NH RLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 182 QVGQQNLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDE 241
           QVG+QNLAFG KFNAKGTIDCYENDLE LP G+RRVIKFKMIEGDF LFEGEWSIEQF  
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG- 240

Query: 242 DRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSST 298
              EDD + QDQ++++ LSY VDVKPKL+LPVRL+EGRLC EIK NL+CIREE HKT+ST
Sbjct: 241 ---EDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNST 297

[Close]

BLAST of Cp4.1LG12g03510 vs. NCBI nr
Match: gi|568876778|ref|XP_006491447.1| (PREDICTED: uncharacterized protein LOC102618481 isoform X1 [Citrus sinensis])

HSP 1 Score: 249.2 bits (635), Expect = 9.0e-63
Identity = 142/267 (53.18%), Postives = 177/267 (66.29%), Query Frame = 1


Query: 29  FPATASAAVAVAVNFRADPSLSRVAVSSSSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSD 88
           FP +  A  A + +    P  S    SS  +T  S L     +    F+     Y SN++
Sbjct: 18  FPISKPATTATSHSTSRFPFTS--TRSSIQKTPHSILSVSPEFNLSQFKRNGTSYCSNTN 77

Query: 89  PAFSDTDDNDD---YSDASESETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQAVWN 148
            +  D +++DD     + S S+T      GV I+I+KLG NSRRI S+I IDASL  VW+
Sbjct: 78  SSELDIEEDDDDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWH 137

Query: 149 ILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEIL 208
           ILTDYEKLADF+P LA+SQ++ K  N  RL+Q+GQQNLAFG KFNAKG +DCYE DLEI 
Sbjct: 138 ILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 197

Query: 209 PSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKLM 268
           PSG++R I+FKMIEGDF LFEG+WSIEQF+  + ED  +   Q   T LSY VDV+PKL 
Sbjct: 198 PSGKKRDIEFKMIEGDFQLFEGKWSIEQFNGGKFEDSESLLSQKFQTTLSYSVDVRPKLW 257

Query: 269 LPVRLIEGRLCDEIKLNLMCIREEAHK 293
           LPVRL+EGRLC+EIK NL CIRE A K
Sbjct: 258 LPVRLVEGRLCNEIKTNLSCIREAAKK 282

[Close]

BLAST of Cp4.1LG12g03510 vs. NCBI nr
Match: gi|567904326|ref|XP_006444651.1| (hypothetical protein CICLE_v10021459mg [Citrus clementina])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 143/268 (53.36%), Postives = 176/268 (65.67%), Query Frame = 1


Query: 29  FPATASAAVAVAVNFRADPSLSRVAVSSSSRTKSSNLFSDSTYPAKHFRSRFRKYYSNSD 88
           FP +  A  A + +    P  S    SS  +T  S L     +    F+     Y SN++
Sbjct: 18  FPISKPATTATSHSTSRFPFTS--TRSSIQKTPHSILSVSPEFNLSQFKRNGTSYCSNTN 77

Query: 89  PAFSDTDDNDDYSDASE----SETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQAVW 148
            +  D ++ DD    SE    S+T      GV I+I+KLG NSRRI S+I IDASL  VW
Sbjct: 78  SSELDIEEEDDDDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVW 137

Query: 149 NILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEI 208
           +ILTDYEKLADF+P LA+SQ++ K  N  RL+Q+GQQNLAFG KFNAKG +DCYE DLEI
Sbjct: 138 HILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEI 197

Query: 209 LPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKL 268
            PSG++R I+FKMIEGDF LFEG+WSIEQF+  + ED  +   Q   T LSY VDV+PKL
Sbjct: 198 FPSGKKRDIEFKMIEGDFQLFEGKWSIEQFNGGKFEDSESLLSQKFQTTLSYSVDVRPKL 257

Query: 269 MLPVRLIEGRLCDEIKLNLMCIREEAHK 293
            LPVRL+EGRLC+EIK NL CIRE A K
Sbjct: 258 WLPVRLVEGRLCNEIKTNLSCIREAAKK 283

[Close]

BLAST of Cp4.1LG12g03510 vs. NCBI nr
Match: gi|702489310|ref|XP_010035364.1| (PREDICTED: uncharacterized protein LOC104424610 [Eucalyptus grandis])

HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62
Identity = 126/208 (60.58%), Postives = 157/208 (75.48%), Query Frame = 1


Query: 99  DYS-----DASESETIFEDDG----GVSIQIEKLGNNSRRIYSRIGIDASLQAVWNILTD 158
           DYS     +A E E +  D+     GV I+I+K G N+RRI SRIGIDA+L  +W+ILTD
Sbjct: 68  DYSPVEGGEAEEDEGLDGDESVSGDGVFIEIKKTGKNTRRILSRIGIDATLDTIWSILTD 127

Query: 159 YEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCYENDLEILPSGR 218
           YE+L+DFIPGLA+S+L+ K  N ARL+Q+GQQNLAFG KFNAKG +DCYE DLE LPSG+
Sbjct: 128 YERLSDFIPGLAVSELMEKRENFARLYQIGQQNLAFGLKFNAKGVVDCYEKDLECLPSGQ 187

Query: 219 RRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQDVNTILSYRVDVKPKLMLPVR 278
           +R I+FKMIEGDF +FEG+WSIEQ +    ED   +  Q+  T LSY VDVKPKL LPVR
Sbjct: 188 KRDIEFKMIEGDFQVFEGKWSIEQLNIGAYEDSSPTNGQEFQTTLSYIVDVKPKLWLPVR 247

Query: 279 LIEGRLCDEIKLNLMCIREEAHKTSSTT 298
           L+EGRLC EI +NL+CIRE+A K +S +
Sbjct: 248 LVEGRLCSEITMNLLCIREQALKVNSNS 275

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g03510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g03510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCX4_CUCSA	6.8e-110	71.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001770 PE=4 SV=1	[more]
V4U6T6_9ROSI	1.1e-62	53.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021459mg PE=4 SV=1	[more]
A0A067HFI2_CITSI	1.1e-62	53.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022784mg PE=4 SV=1	[more]
A0A058ZZ96_EUCGR	2.4e-62	60.58	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00552 PE=4 SV=1	[more]
A0A151SS12_CAJCA	8.4e-60	58.64	Uncharacterized protein OS=Cajanus cajan GN=KK1_003872 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g03510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01650.1	9.5e-63	50.92	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT5G08720.1	1.3e-19	32.96	Streptomyces cyclase/dehydrase (InterPro:IPR005031)	[more]

BLAST of Cp4.1LG12g03510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116819\|ref\|XP_008458275.1\|	8.5e-114	73.18	PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo]	[more]
gi\|778709027\|ref\|XP_004138514.2\|	9.8e-110	71.10	PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus]	[more]
gi\|568876778\|ref\|XP_006491447.1\|	9.0e-63	53.18	PREDICTED: uncharacterized protein LOC102618481 isoform X1 [Citrus sinensis]	[more]
gi\|567904326\|ref\|XP_006444651.1\|	1.5e-62	53.36	hypothetical protein CICLE_v10021459mg [Citrus clementina]	[more]
gi\|702489310\|ref\|XP_010035364.1\|	3.4e-62	60.58	PREDICTED: uncharacterized protein LOC104424610 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR005031	COQ10_START

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g03510.1	Cp4.1LG12g03510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005031	Coenzyme Q-binding protein COQ10, START domain	PFAM	PF03364	Polyketide_cyc	coord: 136..286 score: 1.8
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 130..262 score: 3.
None	No IPR available	PANTHER	PTHR34060	FAMILY NOT NAMED	coord: 50..292 score: 4.0E
None	No IPR available	PANTHER	PTHR34060:SF1	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN	coord: 50..292 score: 4.0E
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 132..291 score: 1.65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g03510	Cucsa.135380	Cucumber (Gy14) v1	cgycpeB0359
Cp4.1LG12g03510	CmaCh17G004040	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g03510	CmoCh17G003940	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g03510	Cla009202	Watermelon (97103) v1	cpewmB161
Cp4.1LG12g03510	Csa6G001770	Cucumber (Chinese Long) v2	cpecuB141
Cp4.1LG12g03510	MELO3C021224	Melon (DHL92) v3.5.1	cpemeB112
Cp4.1LG12g03510	ClCG06G004130	Watermelon (Charleston Gray)	cpewcgB144
Cp4.1LG12g03510	CSPI06G00240	Wild cucumber (PI 183967)	cpecpiB143
Cp4.1LG12g03510	Lsi09G015340	Bottle gourd (USVL1VR-Ls)	cpelsiB101
Cp4.1LG12g03510	MELO3C021224.2	Melon (DHL92) v3.6.1	cpemedB138
Cp4.1LG12g03510	CsaV3_6G000300	Cucumber (Chinese Long) v3	cpecucB0165
Cp4.1LG12g03510	Bhi12G001779	Wax gourd	cpewgoB0173
Cp4.1LG12g03510	CsGy6G000290	Cucumber (Gy14) v2	cgybcpeB721
Cp4.1LG12g03510	Carg05584	Silver-seed gourd	carcpeB0099

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None