Carg05584 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05584
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	UPF0187 protein
Location	Cucurbita_argyrosperma_scaffold_046 : 1379361 .. 1384292 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCCTTTCTCAATTCATCAGACCCCACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCCCGTTTGCCTCCCACATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGATCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCGGAACCAAATCGAGTAACCTTTTCTCAGATTCTACCTATCATGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTATTCGAGAATTGGTATTGATGCCTCACTTCAGACCGTGTGGAATATCCTGACGGATTATGAGAAATTGGCTGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTAGTTCTTGTTCTTATTCTTCTTCTTTACCGCCCCTTTCCCTCCGTATGTTCTTCAGGAATTTGAACACATTTAACGATTTCTGGAGCGCTCGATTTCCATCTTTCTGTTTCTCTATACGCATCTTGGTTATGAATATAACACAAAAAGTTAGATATACTATAGCCCAGTTGAATGGTGTTCAATGGTGAGGATGGTTGGGAAGGAGTCACACGTTGGCTAATTTAGAGAATGATCATAGGTTTGTAAGTGAGGAATACTATTTCCATTGGTACGAGGTCTTTTGGAGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGATAATATCGTACCATTTTGTAGATTCGTGATTCATAGCATGGTATCATAGTCATGCCCTTAACGTAGCCATGTCAATAGAATCCTCAAATATTGAACAAAGAAGTTGTGAGCCTCAAAGGTATTGTCAAAAGTGACTCAAGTATTGAACAAAGGGGGTAATTTGTTCGAGAACTCCATAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGTTCTATAGGCCTCAGGGGAGACTCTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAGGGAGTCCTACATTGGCTAATTTAGGGAATGATCATGAGTTTATAAGTGGGGAATACCATCTCCATTAGTATGAGGCTTTTTGGGGAAGCCCAAAGCAAAGTCACGAGGGCTTATGCTCAAAATAGACAATATCATATCATTGTGAAGATCCTTGATTCTTAACCCTAAGTGTTTGAACTCAAGTATTATAACTAGATTCAAATTCAACATGGTCCGGTTATTTCCAACTGATATTAATGATTCTGTGCAGAATACCATGAATTATGTTAATTTAGTAAGCCATATTGTGAAGTGCGTGGTAAGAATTTATATTAATTTTCCATGTGAGGAGAATGCTACTAGCCCACATTTCTAACGCCTTGGTGTCCGTAAGAACTATATTAGAACCCAAAAGTAAATCCTATCCATTTCCTTCTTGGAAGATTTAACTTCGCTTCTCACCAGATGTTCTGAAGCCTGAATGTGTAGTTAGCTCTTCTTGAATGAATTAGGGAAGCTCCATTTTTTTAGGGGAAGAATCTCCTCTTTGACTCTTATATATGTTCTTATGAGACATCCACAAAAAGAAGTAATGTCTTTGGTTGACATTTATTTGGGCCTTCTTTTGGAAGTTGTGGGAAGAAAGCAATCACCAAAATTTTAGGGACAAGGAATTTACTTTTGATTGATTTCTTGATGCTATGGCATTTCTTATGGCTTCTTGGTGTCAATGCTCACTCATTTTTCTTCACTATAGCTTTTCCTCTTTACCATCCAATTAGAGAGGTTTTTCGTAACTCACTTGGGTCAGGGTTATTCTCTTTTGTAATTTCATATTATCAATGAATTTGAAGGAATTTTTGGATATGGCTTAACGTATTATAAAAAAACCTCATCATGACTTTCTTTTGGAATTTATGGAAAGAAAGAAATCAGAGAATATTTACAGAAAAGACACAAAGTTACAAAATTTTTTTCGAAAATATTGTTTACCAAGTTATATCTTGGTGTAAACTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAATTGGGAAAGTCTTTTGTAAATACCATGGATTATACGTCCCTTTTATAAATTTCAATCATCAATGAAGTTGTCGGTTAAAAAGATCCCCCATTTGTAAGCTCTCTCTCTTGGAACTATACTCAGCCCCTTGCCTGTCCCCAAGCAAATTACGTGGATGTAATGATGGATTTCACAGAGGGTCTCCCAAAATCGTATGGGTATGTTGAGGACAAGGTGACTAAATACAGACATTCTCCCGGTGTTACTCTGTTTGCCAAAGAAATTGTGCGCTGCCATTGGTTTCCCAGACACATTGTTTCCAACAGGGAAAAGGAGTTTGTCAGCTACTTTTTAATTGAATAATTCCGTTTACAAGACACTCAACTGCAGTAAAGCATGACGTCCACCCACAGATAGATGGGCAACCTAAAATTATGAACAAATGTCTTGAAGCCTATCTGCATTGCTTCTGCTATGAGAAACCAGAGCAGTGGAGTTTTTTAGGCTACCACGTGCTGAATTTTGGTACGATACAGTCCCATTGTAGGCAGTTTATGGCTGTTCACCATTTCTTTGGTTTTTATGGTGGATGAGACTACAAATGACAAATTTGAGTCGATGTTCATTTAATTCGTGGGGAATCCTCATTTAGATGGGAAGAGAGTGGGAAGATAATCTTCCCTATTAACTAAACGGGTTAGGGCAGGGATTATATTACCCATCCCCCGCCTATCTTGCTTCTTATTTATAAATATATATATACACACATACATACAAGTTCCCTGCGAAAATAAATGGGGAAGTTTGTGTGGAAGGAAATTGAAATAGGAGACAGGATGAAGAAGACTTCCTTGTTCCCGACCCACCCTGTGGACACAATACTTTCTCTGTTCTTAAAGCTCTATTTGACTATAGCACAAGAGTGAATGAAAACATTTGTTGATTTGCTTCACCATGAATTGAACTACGAAGTGGAAGTCTTGGTATTTCTAGAAATCTGCCCTATTGCTAGCGTTCTTTAGCCACCAAATGCAATGAAAGGCTTCCATCCAACTTCCTAAGCCCCTTTAATCTGCTGCGAATGATTCAGGGTGTTGCTTATAAGTTGGACATTCCTCCACTTAATCCATTGCCCTTGGGGCTGGGGCCAGTGCACGGGCTTCCCCTTTCACGTCGCAAAGATCGAGTGGTCGTTAAACCACCCAAGGTCTTTTGTGTGTGGAGGAACACCGAGACTGCTAATTTGGAGATTCTGTTTTGCTAGAAGGATCCTCTTGAGTTCGTAAGCATGTCGAATTGATATCAACTGCAAGCAATTCCCAGATTGCCTTAAGGACAAGGTCTCTTTTGGTCTGCAGCAAAGGTTAAACCCCTAATTACCAACGTTTACACAAGGAGTAATAAGGGAAGGGTAAAGTGAGCCAGCCCTCTCGAATGGGCTATGTGCAATTTTGTATTGTGTGTTCAGCTCTAATCTTCTGTAGGAATGTGCAATTTTGTATTGTGTATTCAGCCCTTAGTTTCTATATTTTAGTGTAATTGTTTTACCCCTGTCTGGAACATTGAATTTCATGTGGTTAACTACAGTTTACTGCCAGTACGCTTTATTGCTTGACAAATTGTAAGAAACCCTTGTTTGTGCTCTTGCCTCCTACTTTCATGTATGTGAAATATGTGAAATATGTGAATGATTTAGTATATCCCCACATCGATTGAAGCTGCTGCTGCACGTTGAGCTCATTCAGTTGTGACATGGTCACCTCTCTTATTATCATTGTTGCGTATTATTCAAAGGGTATAGAGCTTTTTACAGCTGGTGTAGAGGAGCGCACTTTTGTTTTCCTTTTTACTAAACTAGTGGTGGGTCCTATGGTTCCTATACCGATGTATTTTCTGGTCCTTTTTTTTTAGTTCTTCGACCCGAAGCAATAGCTTCTAGCTAGTTCAATAGATAAAATGAGTGTGCTTTAGCTCACTCAAGAATGGAATGACAATGGTCAGCCAACAAGCTCGTTCTGATCTTGGATGCAGTACATTGGAATCCTGAAGCACCACCACGAACGCTACCGCGTGTTCTCTTTCGTGATGTACTCAATATTGTTTTCCTCAAATTTGAAGCCGTTTATTTTACATTATTTGAAGCGAGAAGTATGATCCAATCCTATGGACTTTTGACCCCACACCTTCACATGCTCTTTTTCTTTTCTTCATGCCTATTAACATGCTTTGACATTCTTCCAATAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTGTGAGAACGACCTTGAAATTCTTCCTTCGGGTAAAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGGTAATCATCCTTTGCATAGATCAATACATTTCTATTAGAAGGCATTTACTTTTCATGTAACAATCACAATCAATTCAGTAGATTTCCCTACATTTCTCTTAATCCTTTTTAGTTATAATTAACATTACTAACCATTAATTTCGTAACTTGGTCGTATTGATGCAGTTTGATGAAGACAGACTCGAAGACGATGGTAACTCGCAAGATCAAGAACTAAATACAATTTTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGGCTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGAGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA

mRNA sequence

ATGCTTTCCTTTCTCAATTCATCAGACCCCACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCCCGTTTGCCTCCCACATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGATCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCGGAACCAAATCGAGTAACCTTTTCTCAGATTCTACCTATCATGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTATTCGAGAATTGGTATTGATGCCTCACTTCAGACCGTGTGGAATATCCTGACGGATTATGAGAAATTGGCTGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTGTGAGAACGACCTTGAAATTCTTCCTTCGGGTAAAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGTTTGATGAAGACAGACTCGAAGACGATGGTAACTCGCAAGATCAAGAACTAAATACAATTTTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGGCTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGAGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA

Coding sequence (CDS)

ATGCTTTCCTTTCTCAATTCATCAGACCCCACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCCCGTTTGCCTCCCACATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGATCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCGGAACCAAATCGAGTAACCTTTTCTCAGATTCTACCTATCATGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTATTCGAGAATTGGTATTGATGCCTCACTTCAGACCGTGTGGAATATCCTGACGGATTATGAGAAATTGGCTGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTGTGAGAACGACCTTGAAATTCTTCCTTCGGGTAAAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGTTTGATGAAGACAGACTCGAAGACGATGGTAACTCGCAAGATCAAGAACTAAATACAATTTTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGGCTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGAGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA

Protein sequence

MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTKSSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS

Homology

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BLAST of Carg05584 vs. NCBI nr
Match: XP_022959182.1 (uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata])

HSP 1 Score: 562.4 bits (1448), Expect = 9.3e-157
Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60
           MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK
Sbjct: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60

Query: 61  SSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120
           SSNLFSDSTYHAKHFRSRF KYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE
Sbjct: 61  SSNLFSDSTYHAKHFRSRFGKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120

Query: 121 KLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180
           KLGNNSRRIYSRIGIDASLQ VWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ
Sbjct: 121 KLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180

Query: 181 NLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240
           NLAFGFKFNAKGTIDC ENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRL+D
Sbjct: 181 NLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLKD 240

Query: 241 DGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS 298
           DGNSQDQE NTILSYRVDVKPKLMLP+RLIEGRLCDEIKLNLMCIREEAHKTSSTTS
Sbjct: 241 DGNSQDQEANTILSYRVDVKPKLMLPIRLIEGRLCDEIKLNLMCIREEAHKTSSTTS 297

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BLAST of Carg05584 vs. NCBI nr
Match: XP_023548259.1 (uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556.6 bits (1433), Expect = 5.1e-155
Identity = 289/297 (97.31%), Postives = 292/297 (98.32%), Query Frame = 0


Query: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60
           MLSFLNSSDPTYSSPLISCSPSRLPP FPATASAAVAVAVNFRADPSLSRVAVSSSS TK
Sbjct: 2   MLSFLNSSDPTYSSPLISCSPSRLPPAFPATASAAVAVAVNFRADPSLSRVAVSSSSRTK 61

Query: 61  SSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120
           SSNLFSDSTY AKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE
Sbjct: 62  SSNLFSDSTYPAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 121

Query: 121 KLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180
           KLGNNSRRIYSRIGIDASLQ VWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ
Sbjct: 122 KLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 181

Query: 181 NLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240
           NLAFGFKFNAKGTIDC ENDLEILPSG+RRVIKFKMIEGDFALFEGEWSIEQFDEDRLED
Sbjct: 182 NLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 241

Query: 241 DGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS 298
           DGNSQDQ++NTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS
Sbjct: 242 DGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS 298

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BLAST of Carg05584 vs. NCBI nr
Match: XP_023006623.1 (uncharacterized protein LOC111499296 [Cucurbita maxima])

HSP 1 Score: 550.8 bits (1418), Expect = 2.8e-153
Identity = 286/296 (96.62%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60
           MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAV VNFRADPSLSRVAVSSSS TK
Sbjct: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVVVNFRADPSLSRVAVSSSSRTK 60

Query: 61  SSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120
           SSN+FSDSTY AK+FRSRFRKYYSNSDP FSDTDDND+YSDASESETIFEDDGGVSIQIE
Sbjct: 61  SSNIFSDSTYPAKYFRSRFRKYYSNSDPTFSDTDDNDEYSDASESETIFEDDGGVSIQIE 120

Query: 121 KLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180
           KLGNNSRRIYSRIGID SLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ
Sbjct: 121 KLGNNSRRIYSRIGIDVSLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180

Query: 181 NLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240
           NLAFGFKFNAKGTIDC ENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED
Sbjct: 181 NLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240

Query: 241 DGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTT 297
           DGN QDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTT
Sbjct: 241 DGNLQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTT 296

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BLAST of Carg05584 vs. NCBI nr
Match: XP_022959181.1 (uncharacterized protein LOC111460246 isoform X1 [Cucurbita moschata])

HSP 1 Score: 527.7 bits (1358), Expect = 2.5e-146
Identity = 280/309 (90.61%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60
           MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK
Sbjct: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60

Query: 61  SSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120
           SSNLFSDSTYHAKHFRSRF KYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE
Sbjct: 61  SSNLFSDSTYHAKHFRSRFGKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120

Query: 121 KLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180
           KLGNNSRRIYSRIGIDASLQ VWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ
Sbjct: 121 KLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180

Query: 181 NLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240
           NLAFGFKFNAKGTIDC ENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRL+D
Sbjct: 181 NLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLKD 240

Query: 241 DGNSQ------------DQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREE 298
           DGN Q                       VDVKPKLMLP+RLIEGRLCDEIKLNLMCIREE
Sbjct: 241 DGNLQXXXXXXXXXXXXXXXXXXXXXXXVDVKPKLMLPIRLIEGRLCDEIKLNLMCIREE 300

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BLAST of Carg05584 vs. NCBI nr
Match: XP_022959183.1 (uncharacterized protein LOC111460246 isoform X3 [Cucurbita moschata])

HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128
Identity = 246/257 (95.72%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60
           MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK
Sbjct: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60

Query: 61  SSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120
           SSNLFSDSTYHAKHFRSRF KYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE
Sbjct: 61  SSNLFSDSTYHAKHFRSRFGKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120

Query: 121 KLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180
           KLGNNSRRIYSRIGIDASLQ VWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ
Sbjct: 121 KLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180

Query: 181 NLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240
           NLAFGFKFNAKGTIDC ENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRL+D
Sbjct: 181 NLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLKD 240

Query: 241 DGNSQDQELNTILSYRV 258
           DGN QDQE   I  YR+
Sbjct: 241 DGNLQDQE--QIQFYRI 255

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BLAST of Carg05584 vs. TAIR10
Match: AT4G01650.1 (Polyketide cyclase / dehydrase and lipid transport protein)

HSP 1 Score: 218.8 bits (556), Expect = 4.6e-57
Identity = 125/251 (49.80%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 54  SSSSGTKSSNL---FSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDD----------YS 113
           +S S TK   L   FS S+      R  F   + +S P F+                  +
Sbjct: 30  NSHSPTKKYRLITSFSPSSTLLASSRRCFTCRFGDSSPRFNSXXXXXXXXXXXXXXYCLT 89

Query: 114 DASESETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLA 173
           D    E +  DD GV I+++KL  +SRRI S+IG++ASL +VW++LTDYEKL+DFIPGL 
Sbjct: 90  DGKTEELVVGDD-GVLIELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLV 149

Query: 174 LSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGD 233
           +S+L+ K GN  RLFQ+GQQNLA G KFNAK  +DC E +LE+LP G+RR I FKM+EGD
Sbjct: 150 VSELVEKEGNRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGD 209

Query: 234 FALFEGEWSIEQFDEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKL 292
           F LFEG+WSIEQ D+    +  + Q ++  T L+Y VDVKPK+ LPVRL+EGRLC EI+ 
Sbjct: 210 FQLFEGKWSIEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRT 269

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BLAST of Carg05584 vs. TAIR10
Match: AT5G08720.1 (Streptomyces cyclase/dehydrase (InterPro:IPR005031))

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 0


Query: 115 VSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARL 174
           V  +++ +    RRI   I +D+  Q+VWN+LTDYE+LADFIP L  S  I     H   
Sbjct: 85  VRCEVDVISWRERRIRGEIWVDSDSQSVWNVLTDYERLADFIPNLVWSGRI--PCPHPGR 144

Query: 175 FQVGQQNL--AFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQ 234
             + Q+ L  A  +   A+  +D      E L S   R + F M++GDF  FEG+WS++ 
Sbjct: 145 IWLEQRGLQRALYWHIEARVVLDL----HECLDSPNGRELHFSMVDGDFKKFEGKWSVK- 204

Query: 235 FDEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHK 292
                      S  + + T+LSY V+V P+   P   +E  +  ++ +NL  +  +A K
Sbjct: 205 -----------SGIRSVGTVLSYEVNVIPRFNFPAIFLERIIRSDLPVNLRAVARQAEK 245

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BLAST of Carg05584 vs. TrEMBL
Match: tr|A0A1S3C7G7|A0A1S3C7G7_CUCME (uncharacterized protein LOC103497743 OS=Cucumis melo OX=3656 GN=LOC103497743 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 5.1e-103
Identity = 205/302 (67.88%), Postives = 232/302 (76.82%), Query Frame = 0


Query: 1   MLSFLNSSDPTY-----SSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSS 60
           M SFLNSS+PTY                            +AV   FR  PSLSR+A+ +
Sbjct: 1   MRSFLNSSEPTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVVPTFRVHPSLSRLAILA 60

Query: 61  SSGTKSSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGV 120
           +  T   + +S +TY  KHFRSRFR YYSNS+P FSD+D+N DYSD S+SETIF+D GG+
Sbjct: 61  TKSTTIPSSYSSTTYPPKHFRSRFRNYYSNSEPTFSDSDENGDYSDVSDSETIFDDGGGL 120

Query: 121 SIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLF 180
            IQIEKLG NSRRIYSRIGIDA LQ VWNILTDYE+LADFIPGLA+SQ++FK GNHARLF
Sbjct: 121 CIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIGNHARLF 180

Query: 181 QVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDE 240
           QVG+QNLAFGFKFNAKGTIDC ENDLE LP GKRRVIKFKMIEGDF LFEGEWSIEQF  
Sbjct: 181 QVGEQNLAFGFKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG- 240

Query: 241 DRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSST 298
              EDD + QDQE+++ LSY VDVKPKL+LPVRL+EGRLC EIK NLMCIREE HKTSST
Sbjct: 241 ---EDDDSFQDQEVHSTLSYSVDVKPKLLLPVRLLEGRLCSEIKANLMCIREEVHKTSST 298

[Close]

BLAST of Carg05584 vs. TrEMBL
Match: tr|A0A0A0KCX4|A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001770 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.4e-100
Identity = 202/301 (67.11%), Postives = 230/301 (76.41%), Query Frame = 0


Query: 1   MLSFLNSSDPTY-----SSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSS 60
           MLSFLNSS+P++                         SAA+AV   FR  PSLS +A+ +
Sbjct: 1   MLSFLNSSEPSFXXXXXXXXXXXXXXXXXXXXXXXXXSAALAVVPTFRVHPSLSSLAILT 60

Query: 61  SSGTKSSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGV 120
           +  T     +S +TY  KHFRSRFR YYSNS+P FSD D+N DYSD S+SETIF+D GG+
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 121 SIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLF 180
           SIQIEKLG NSRRIYSRIGIDA LQ VWNILTDYE+LADFIPGLA+SQ++FK  NH RLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 181 QVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDE 240
           QVG+QNLAFG KFNAKGTIDC ENDLE LP GKRRVIKFKMIEGDF LFEGEWSIEQF  
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG- 240

Query: 241 DRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSST 297
              EDD + QDQE+++ LSY VDVKPKL+LPVRL+EGRLC EIK NL+CIREE HKT+ST
Sbjct: 241 ---EDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNST 297

[Close]

BLAST of Carg05584 vs. TrEMBL
Match: tr|A0A2I4FMS7|A0A2I4FMS7_9ROSI (uncharacterized protein LOC109000500 isoform X1 OS=Juglans regia OX=51240 GN=LOC109000500 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.7e-63
Identity = 127/183 (69.40%), Postives = 146/183 (79.78%), Query Frame = 0


Query: 114 GVSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHAR 173
           GV I+IEKLG N+RRI SRI IDA L T+WNILTDYE+L+DFIPGLALSQL+ KT N+AR
Sbjct: 113 GVCIEIEKLGKNTRRIRSRIAIDAPLHTIWNILTDYERLSDFIPGLALSQLLQKTHNYAR 172

Query: 174 LFQVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQF 233
           LFQ+GQQNLAFG KFNAKG +DC E +LE LPSG++R I+FKMIEGDF LFEG+WSIEQ 
Sbjct: 173 LFQIGQQNLAFGLKFNAKGIVDCYEKELESLPSGQKRDIEFKMIEGDFQLFEGKWSIEQS 232

Query: 234 DEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTS 293
           +  R ED  +   Q+  T LSY VDVKPKL LPV+L+EGRLC EIKLNL  IREEA K  
Sbjct: 233 NRGRDEDSDSLVLQQFYTTLSYLVDVKPKLWLPVQLVEGRLCKEIKLNLTSIREEALKAV 292

Query: 294 STT 297
             T
Sbjct: 293 RNT 295

[Close]

BLAST of Carg05584 vs. TrEMBL
Match: tr|A0A2R6PNY1|A0A2R6PNY1_ACTCH (UPF0187 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc25437 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61
Identity = 125/201 (62.19%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 94  DDNDDYSDASESETIFE-DDGGVSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKL 153
           D + D+S   +S +I+   D G+ I+IEK+G NSRRI SRI I+ASLQTVW+ILTDYEKL
Sbjct: 49  DHDFDFSGGMDSPSIYRGSDDGIEIEIEKIGKNSRRIRSRIAIEASLQTVWDILTDYEKL 108

Query: 154 ADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVI 213
            DFIPGLA+ QL+ K GN  RLFQ+GQQ LAFG  FNAKG +DC E DLE L  G RR I
Sbjct: 109 VDFIPGLAVCQLLEKRGNFVRLFQIGQQKLAFGLNFNAKGIVDCYERDLESLACGYRRDI 168

Query: 214 KFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEG 273
           +FKMI+GDF LF+G+WSIEQ++  R ED  +   QE  T LSY VDV+PKL LPVRL+EG
Sbjct: 169 EFKMIKGDFQLFKGKWSIEQYNTKRNEDKDSLVGQEFQTTLSYVVDVEPKLWLPVRLVEG 228

Query: 274 RLCDEIKLNLMCIREEAHKTS 294
           RLC EIK+NL C+R EA K +
Sbjct: 229 RLCREIKVNLSCVRVEAQKAN 249

[Close]

BLAST of Carg05584 vs. TrEMBL
Match: tr|A0A2P2MZG8|A0A2P2MZG8_RHIMU (Uncharacterized protein MANES_01G236200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.2e-61
Identity = 125/180 (69.44%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 112 DGGVSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNH 171
           + GV I I+KLGN SRRI S I IDASL+T+WN+LTDYE+LADFIPGLA+S+LI K  N 
Sbjct: 96  EDGVFIGIKKLGNYSRRIRSEIVIDASLETIWNLLTDYERLADFIPGLAVSKLIDKKDNF 155

Query: 172 ARLFQVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIE 231
           ARL+Q+GQQNL FG KFNAK T+DC E DLEIL  G+RR I+FKMIEGDF +FEG+WSIE
Sbjct: 156 ARLYQIGQQNLVFGLKFNAKATLDCYERDLEILDFGERRDIEFKMIEGDFHVFEGKWSIE 215

Query: 232 QFDEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHK 291
           QF +   ED   S +QE  TILSY VDVKPKL LPV LIEGRLC EIK NL+CIR+EA K
Sbjct: 216 QFCKS--EDSDFSHNQEFQTILSYFVDVKPKLWLPVHLIEGRLCKEIKTNLLCIRQEAQK 273

The following BLAST results are available for this feature:

BLAST of Carg05584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959182.1	9.3e-157	97.98	uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata]	[more]
XP_023548259.1	5.1e-155	97.31	uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo]	[more]
XP_023006623.1	2.8e-153	96.62	uncharacterized protein LOC111499296 [Cucurbita maxima]	[more]
XP_022959181.1	2.5e-146	90.61	uncharacterized protein LOC111460246 isoform X1 [Cucurbita moschata]	[more]
XP_022959183.1	1.1e-128	95.72	uncharacterized protein LOC111460246 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg05584 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01650.1	4.6e-57	49.80	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT5G08720.1	1.1e-18	32.40	Streptomyces cyclase/dehydrase (InterPro:IPR005031)	[more]

BLAST of Carg05584 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05584 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C7G7\|A0A1S3C7G7_CUCME	5.1e-103	67.88	uncharacterized protein LOC103497743 OS=Cucumis melo OX=3656 GN=LOC103497743 PE=...	[more]
tr\|A0A0A0KCX4\|A0A0A0KCX4_CUCSA	1.4e-100	67.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001770 PE=4 SV=1	[more]
tr\|A0A2I4FMS7\|A0A2I4FMS7_9ROSI	6.7e-63	69.40	uncharacterized protein LOC109000500 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2R6PNY1\|A0A2R6PNY1_ACTCH	4.8e-61	62.19	UPF0187 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc254...	[more]
tr\|A0A2P2MZG8\|A0A2P2MZG8_RHIMU	8.2e-61	69.44	Uncharacterized protein MANES_01G236200 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005031	COQ10_START
IPR023393	START-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05584-RA	Carg05584-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	G3DSA:3.30.530.20		coord: 128..290 e-value: 2.0E-18 score: 68.5
IPR005031	Coenzyme Q-binding protein COQ10, START domain	PFAM	PF03364	Polyketide_cyc	coord: 135..284 e-value: 2.3E-20 score: 73.0
None	No IPR available	PANTHER	PTHR34060:SF1	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN	coord: 50..294
None	No IPR available	PANTHER	PTHR34060	FAMILY NOT NAMED	coord: 50..294
None	No IPR available	CDD	cd08866	SRPBCC_11	coord: 131..291 e-value: 4.29807E-51 score: 166.252
None	No IPR available	SUPERFAMILY	SSF55961	Bet v1-like	coord: 131..290

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05584	Cla009202	Watermelon (97103) v1	carwmB0073
Carg05584	Csa6G001770	Cucumber (Chinese Long) v2	carcuB0073
Carg05584	MELO3C021224	Melon (DHL92) v3.5.1	carmeB0067
Carg05584	ClCG06G004130	Watermelon (Charleston Gray)	carwcgB0073
Carg05584	CSPI06G00240	Wild cucumber (PI 183967)	carcpiB0077
Carg05584	Cucsa.135380	Cucumber (Gy14) v1	carcgyB0077
Carg05584	CmaCh17G004040	Cucurbita maxima (Rimu)	carcmaB0091
Carg05584	CmoCh17G003940	Cucurbita moschata (Rifu)	carcmoB0097
Carg05584	Lsi09G015340	Bottle gourd (USVL1VR-Ls)	carlsiB061
Carg05584	Cp4.1LG12g03510	Cucurbita pepo (Zucchini)	carcpeB0099
Carg05584	CsGy6G000290	Cucumber (Gy14) v2	carcgybB0074
Carg05584	MELO3C021224.2	Melon (DHL92) v3.6.1	carmedB0068
Carg05584	CsaV3_6G000300	Cucumber (Chinese Long) v3	carcucB0081
Carg05584	Cla97C06G113550	Watermelon (97103) v2	carwmbB0070
Carg05584	Bhi12G001779	Wax gourd	carwgoB0080

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None