Carg05584-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTCCTTTCTCAATTCATCAGACCCCACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCCCGTTTGCCTCCCACATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGATCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCGGAACCAAATCGAGTAACCTTTTCTCAGATTCTACCTATCATGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTATTCGAGAATTGGTATTGATGCCTCACTTCAGACCGTGTGGAATATCCTGACGGATTATGAGAAATTGGCTGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTAGTTCTTGTTCTTATTCTTCTTCTTTACCGCCCCTTTCCCTCCGTATGTTCTTCAGGAATTTGAACACATTTAACGATTTCTGGAGCGCTCGATTTCCATCTTTCTGTTTCTCTATACGCATCTTGGTTATGAATATAACACAAAAAGTTAGATATACTATAGCCCAGTTGAATGGTGTTCAATGGTGAGGATGGTTGGGAAGGAGTCACACGTTGGCTAATTTAGAGAATGATCATAGGTTTGTAAGTGAGGAATACTATTTCCATTGGTACGAGGTCTTTTGGAGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGATAATATCGTACCATTTTGTAGATTCGTGATTCATAGCATGGTATCATAGTCATGCCCTTAACGTAGCCATGTCAATAGAATCCTCAAATATTGAACAAAGAAGTTGTGAGCCTCAAAGGTATTGTCAAAAGTGACTCAAGTATTGAACAAAGGGGGTAATTTGTTCGAGAACTCCATAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGTTCTATAGGCCTCAGGGGAGACTCTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAGGGAGTCCTACATTGGCTAATTTAGGGAATGATCATGAGTTTATAAGTGGGGAATACCATCTCCATTAGTATGAGGCTTTTTGGGGAAGCCCAAAGCAAAGTCACGAGGGCTTATGCTCAAAATAGACAATATCATATCATTGTGAAGATCCTTGATTCTTAACCCTAAGTGTTTGAACTCAAGTATTATAACTAGATTCAAATTCAACATGGTCCGGTTATTTCCAACTGATATTAATGATTCTGTGCAGAATACCATGAATTATGTTAATTTAGTAAGCCATATTGTGAAGTGCGTGGTAAGAATTTATATTAATTTTCCATGTGAGGAGAATGCTACTAGCCCACATTTCTAACGCCTTGGTGTCCGTAAGAACTATATTAGAACCCAAAAGTAAATCCTATCCATTTCCTTCTTGGAAGATTTAACTTCGCTTCTCACCAGATGTTCTGAAGCCTGAATGTGTAGTTAGCTCTTCTTGAATGAATTAGGGAAGCTCCATTTTTTTAGGGGAAGAATCTCCTCTTTGACTCTTATATATGTTCTTATGAGACATCCACAAAAAGAAGTAATGTCTTTGGTTGACATTTATTTGGGCCTTCTTTTGGAAGTTGTGGGAAGAAAGCAATCACCAAAATTTTAGGGACAAGGAATTTACTTTTGATTGATTTCTTGATGCTATGGCATTTCTTATGGCTTCTTGGTGTCAATGCTCACTCATTTTTCTTCACTATAGCTTTTCCTCTTTACCATCCAATTAGAGAGGTTTTTCGTAACTCACTTGGGTCAGGGTTATTCTCTTTTGTAATTTCATATTATCAATGAATTTGAAGGAATTTTTGGATATGGCTTAACGTATTATAAAAAAACCTCATCATGACTTTCTTTTGGAATTTATGGAAAGAAAGAAATCAGAGAATATTTACAGAAAAGACACAAAGTTACAAAATTTTTTTCGAAAATATTGTTTACCAAGTTATATCTTGGTGTAAACTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAATTGGGAAAGTCTTTTGTAAATACCATGGATTATACGTCCCTTTTATAAATTTCAATCATCAATGAAGTTGTCGGTTAAAAAGATCCCCCATTTGTAAGCTCTCTCTCTTGGAACTATACTCAGCCCCTTGCCTGTCCCCAAGCAAATTACGTGGATGTAATGATGGATTTCACAGAGGGTCTCCCAAAATCGTATGGGTATGTTGAGGACAAGGTGACTAAATACAGACATTCTCCCGGTGTTACTCTGTTTGCCAAAGAAATTGTGCGCTGCCATTGGTTTCCCAGACACATTGTTTCCAACAGGGAAAAGGAGTTTGTCAGCTACTTTTTAATTGAATAATTCCGTTTACAAGACACTCAACTGCAGTAAAGCATGACGTCCACCCACAGATAGATGGGCAACCTAAAATTATGAACAAATGTCTTGAAGCCTATCTGCATTGCTTCTGCTATGAGAAACCAGAGCAGTGGAGTTTTTTAGGCTACCACGTGCTGAATTTTGGTACGATACAGTCCCATTGTAGGCAGTTTATGGCTGTTCACCATTTCTTTGGTTTTTATGGTGGATGAGACTACAAATGACAAATTTGAGTCGATGTTCATTTAATTCGTGGGGAATCCTCATTTAGATGGGAAGAGAGTGGGAAGATAATCTTCCCTATTAACTAAACGGGTTAGGGCAGGGATTATATTACCCATCCCCCGCCTATCTTGCTTCTTATTTATAAATATATATATACACACATACATACAAGTTCCCTGCGAAAATAAATGGGGAAGTTTGTGTGGAAGGAAATTGAAATAGGAGACAGGATGAAGAAGACTTCCTTGTTCCCGACCCACCCTGTGGACACAATACTTTCTCTGTTCTTAAAGCTCTATTTGACTATAGCACAAGAGTGAATGAAAACATTTGTTGATTTGCTTCACCATGAATTGAACTACGAAGTGGAAGTCTTGGTATTTCTAGAAATCTGCCCTATTGCTAGCGTTCTTTAGCCACCAAATGCAATGAAAGGCTTCCATCCAACTTCCTAAGCCCCTTTAATCTGCTGCGAATGATTCAGGGTGTTGCTTATAAGTTGGACATTCCTCCACTTAATCCATTGCCCTTGGGGCTGGGGCCAGTGCACGGGCTTCCCCTTTCACGTCGCAAAGATCGAGTGGTCGTTAAACCACCCAAGGTCTTTTGTGTGTGGAGGAACACCGAGACTGCTAATTTGGAGATTCTGTTTTGCTAGAAGGATCCTCTTGAGTTCGTAAGCATGTCGAATTGATATCAACTGCAAGCAATTCCCAGATTGCCTTAAGGACAAGGTCTCTTTTGGTCTGCAGCAAAGGTTAAACCCCTAATTACCAACGTTTACACAAGGAGTAATAAGGGAAGGGTAAAGTGAGCCAGCCCTCTCGAATGGGCTATGTGCAATTTTGTATTGTGTGTTCAGCTCTAATCTTCTGTAGGAATGTGCAATTTTGTATTGTGTATTCAGCCCTTAGTTTCTATATTTTAGTGTAATTGTTTTACCCCTGTCTGGAACATTGAATTTCATGTGGTTAACTACAGTTTACTGCCAGTACGCTTTATTGCTTGACAAATTGTAAGAAACCCTTGTTTGTGCTCTTGCCTCCTACTTTCATGTATGTGAAATATGTGAAATATGTGAATGATTTAGTATATCCCCACATCGATTGAAGCTGCTGCTGCACGTTGAGCTCATTCAGTTGTGACATGGTCACCTCTCTTATTATCATTGTTGCGTATTATTCAAAGGGTATAGAGCTTTTTACAGCTGGTGTAGAGGAGCGCACTTTTGTTTTCCTTTTTACTAAACTAGTGGTGGGTCCTATGGTTCCTATACCGATGTATTTTCTGGTCCTTTTTTTTTAGTTCTTCGACCCGAAGCAATAGCTTCTAGCTAGTTCAATAGATAAAATGAGTGTGCTTTAGCTCACTCAAGAATGGAATGACAATGGTCAGCCAACAAGCTCGTTCTGATCTTGGATGCAGTACATTGGAATCCTGAAGCACCACCACGAACGCTACCGCGTGTTCTCTTTCGTGATGTACTCAATATTGTTTTCCTCAAATTTGAAGCCGTTTATTTTACATTATTTGAAGCGAGAAGTATGATCCAATCCTATGGACTTTTGACCCCACACCTTCACATGCTCTTTTTCTTTTCTTCATGCCTATTAACATGCTTTGACATTCTTCCAATAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTGTGAGAACGACCTTGAAATTCTTCCTTCGGGTAAAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGGTAATCATCCTTTGCATAGATCAATACATTTCTATTAGAAGGCATTTACTTTTCATGTAACAATCACAATCAATTCAGTAGATTTCCCTACATTTCTCTTAATCCTTTTTAGTTATAATTAACATTACTAACCATTAATTTCGTAACTTGGTCGTATTGATGCAGTTTGATGAAGACAGACTCGAAGACGATGGTAACTCGCAAGATCAAGAACTAAATACAATTTTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGGCTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGAGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA ATGCTTTCCTTTCTCAATTCATCAGACCCCACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCCCGTTTGCCTCCCACATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGATCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCGGAACCAAATCGAGTAACCTTTTCTCAGATTCTACCTATCATGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTATTCGAGAATTGGTATTGATGCCTCACTTCAGACCGTGTGGAATATCCTGACGGATTATGAGAAATTGGCTGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTGTGAGAACGACCTTGAAATTCTTCCTTCGGGTAAAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGTTTGATGAAGACAGACTCGAAGACGATGGTAACTCGCAAGATCAAGAACTAAATACAATTTTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGGCTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGAGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA ATGCTTTCCTTTCTCAATTCATCAGACCCCACGTATTCTTCTCCATTGATCTCTTGCTCCCCTTCCCGTTTGCCTCCCACATTTCCGGCCACCGCCTCCGCCGCTGTTGCCGTCGCGGTTAATTTTAGAGCGGATCCTTCTCTTTCACGTGTTGCCGTCTCCAGTAGCAGCGGAACCAAATCGAGTAACCTTTTCTCAGATTCTACCTATCATGCTAAACATTTTCGGTCCAGATTCAGAAAGTATTATTCGAATTCCGACCCCGCGTTCTCAGATACTGATGACAATGACGATTACTCTGACGCTTCAGAATCTGAAACGATTTTTGAGGATGATGGAGGAGTAAGCATCCAAATCGAGAAGTTGGGTAACAATTCTCGCAGAATTTATTCGAGAATTGGTATTGATGCCTCACTTCAGACCGTGTGGAATATCCTGACGGATTATGAGAAATTGGCTGATTTCATACCTGGTCTTGCTCTCAGCCAATTGATTTTTAAGACTGGCAACCATGCCCGACTCTTTCAGGTTGGACAGCAAAACTTGGCCTTTGGTTTCAAATTTAATGCTAAAGGAACCATTGATTGTTGTGAGAACGACCTTGAAATTCTTCCTTCGGGTAAAAGGCGAGTTATCAAATTCAAGATGATAGAAGGTGACTTTGCTCTCTTTGAGGGAGAATGGTCCATTGAACAGTTTGATGAAGACAGACTCGAAGACGATGGTAACTCGCAAGATCAAGAACTAAATACAATTTTATCGTATAGGGTCGATGTAAAGCCAAAGCTTATGTTACCCGTTCGGCTTATTGAGGGTAGGCTTTGTGACGAGATAAAGCTTAACCTAATGTGTATTCGAGAAGAAGCACATAAAACCAGTTCAACCACCAGCTAA MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTKSSNLFSDSTYHAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIEKLGNNSRRIYSRIGIDASLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQNLAFGFKFNAKGTIDCCENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLEDDGNSQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS
BLAST of Carg05584-RA vs. NCBI nr
Match: XP_022959182.1 (uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata]) HSP 1 Score: 562.4 bits (1448), Expect = 9.3e-157 Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 0
BLAST of Carg05584-RA vs. NCBI nr
Match: XP_023548259.1 (uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 556.6 bits (1433), Expect = 5.1e-155 Identity = 289/297 (97.31%), Postives = 292/297 (98.32%), Query Frame = 0
BLAST of Carg05584-RA vs. NCBI nr
Match: XP_023006623.1 (uncharacterized protein LOC111499296 [Cucurbita maxima]) HSP 1 Score: 550.8 bits (1418), Expect = 2.8e-153 Identity = 286/296 (96.62%), Postives = 289/296 (97.64%), Query Frame = 0
BLAST of Carg05584-RA vs. NCBI nr
Match: XP_022959181.1 (uncharacterized protein LOC111460246 isoform X1 [Cucurbita moschata]) HSP 1 Score: 527.7 bits (1358), Expect = 2.5e-146 Identity = 280/309 (90.61%), Postives = 282/309 (91.26%), Query Frame = 0
BLAST of Carg05584-RA vs. NCBI nr
Match: XP_022959183.1 (uncharacterized protein LOC111460246 isoform X3 [Cucurbita moschata]) HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128 Identity = 246/257 (95.72%), Postives = 248/257 (96.50%), Query Frame = 0
BLAST of Carg05584-RA vs. TAIR10
Match: AT4G01650.1 (Polyketide cyclase / dehydrase and lipid transport protein) HSP 1 Score: 218.8 bits (556), Expect = 4.6e-57 Identity = 125/251 (49.80%), Postives = 163/251 (64.94%), Query Frame = 0
BLAST of Carg05584-RA vs. TAIR10
Match: AT5G08720.1 (Streptomyces cyclase/dehydrase (InterPro:IPR005031)) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18 Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 0
BLAST of Carg05584-RA vs. TrEMBL
Match: tr|A0A1S3C7G7|A0A1S3C7G7_CUCME (uncharacterized protein LOC103497743 OS=Cucumis melo OX=3656 GN=LOC103497743 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 5.1e-103 Identity = 205/302 (67.88%), Postives = 232/302 (76.82%), Query Frame = 0
BLAST of Carg05584-RA vs. TrEMBL
Match: tr|A0A0A0KCX4|A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001770 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 1.4e-100 Identity = 202/301 (67.11%), Postives = 230/301 (76.41%), Query Frame = 0
BLAST of Carg05584-RA vs. TrEMBL
Match: tr|A0A2I4FMS7|A0A2I4FMS7_9ROSI (uncharacterized protein LOC109000500 isoform X1 OS=Juglans regia OX=51240 GN=LOC109000500 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 6.7e-63 Identity = 127/183 (69.40%), Postives = 146/183 (79.78%), Query Frame = 0
BLAST of Carg05584-RA vs. TrEMBL
Match: tr|A0A2R6PNY1|A0A2R6PNY1_ACTCH (UPF0187 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc25437 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61 Identity = 125/201 (62.19%), Postives = 151/201 (75.12%), Query Frame = 0
BLAST of Carg05584-RA vs. TrEMBL
Match: tr|A0A2P2MZG8|A0A2P2MZG8_RHIMU (Uncharacterized protein MANES_01G236200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 8.2e-61 Identity = 125/180 (69.44%), Postives = 144/180 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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