Csa6G001770.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G001770.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Cyclase/dehydrase; contains IPR005031 (Streptomyces cyclase/dehydrase), IPR023393 (START-like domain)
Location	Chr6 : 218382 .. 221534 (+)
Sequence length	897

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAAGGAGTGGGTGAGAGTTGAGAGACCAACGATCTGAGGAAACTAAATTTCCACTTCACACATTAATCCTCACGACGCGATGCTTTCCTTTCTCAATTCGTCAGAACCATCGTTTTCTTCTTCTTCTTCTTCTTCTTCACTAACTTCCTCTTCCCTTCCCCGTTTAGCTCCAACTTCTCCGGCCACTACCTCCGCCGCCCTTGCCGTCGTACCTACTTTTAGAGTCCATCCTTCTCTTTCAAGTCTCGCCATCCTCACCACCAAACCAACAACTATCCCTTTCTCTTATTCTTCTACTACTTATCCTCCCAAACATTTTCGTTCTAGGTTCAGAAATTACTATTCCAATTCCGAGCCCACCTTCTCAGACAGAGACGAAAATGGCGATTACTCTGACGTCTCAGATTCTGAAACGATTTTTGATGACGGTGGTGGCTTAAGTATCCAAATCGAGAAGTTGGGTACCAACTCTCGGAGAATTTACTCGAGGATTGGTATTGATGCTCCACTCCAGGCGGTGTGGAATATCTTGACTGATTATGAAAGATTGGCTGATTTCATACCTGGTCTCGCTATCAGCCAAATACTCTTTAAGATTGACAACCATGTTCGGCTCTTTCAGGTAGTCTTTTCTCTTTATGTTCTTGATAATGTAGGAATTTGAACAGTTTAATGACTTCTGGAGCACTCTCTTTTAAGATCGGTTGTGAATGTATATATAGATCAAGGTTAAAGTACCATATCCCAGCTTAATTGTTCAATTTGATATGCTTTAACATGGTGCTTTAACAATGGATAATGGAAGCAAATTCCAACAGAGTCCGGTTAAGTACAACTGATATTAATGATTAGGTGCCAAATGTCATGACTTACGTTTATAGAGTAATCTATATTGTGAAGGGAGTGATAAGAATTTATATGAATATACCATGTGTGAGCCGTAGAGGAGTGCCTCAATTCCTCATTTCTAATGCCCAGGCACCCATAAGAACTATATGAGAACACAAAAGTAAATCACATACCTTTACTTCTTCGAAAATTTTATTTCCCCTCTCACCACAGTTGTGAAGCCTTGGATGAGTAGATTCACTCTTCTTCTTGAATGAATTAGCCATTAGGGAAGCTCCATTTAGAATCTCGTCATTGACACTTAAAAAGAATGGCGACTTGTGGCTTGGATTTCATTTGTTCTTTTGTACGGATGAAATACTTTTTCTCCTATCATGATTGCTATGTAATTGCTGGCTTCTTCGTTGTTCTCTAATGCAAGCTTCAAAATGATGTAACCAAATTGATAGTTTTTGAAGTGCACGGGATAAATCCCCACAATTTCCTTTGAAGTTTTCGAAGATTTCTTTTATCCACAAATACTAGCTTCTGATACCAATCCTCTTTGCTATCTACCCGCTCCGCTGCCTATTTCAGTCTCTCATGAGAACTCTGATGATAGAAAAGCCTCTTCCCACTCCTATGAAGGTCGAGTTTACGATTGAGCGACGATTCCGTGTCGTCTCTCTTTACCTTGCTGCCGGTTTTTGGTATAATATGTGACTTTGGGGTCTCGTCAACTCATCTGGAGCTTGATTTTTTAGCGAGCAGATATTGAAATGTTACTAGGTACTGTATCCTATTTCTTATGCCTAGAATCTCATCTTTCCAACTGCTTCTTGGTGATGTTATAGATACTGCCCCATAATCTTATAGCCAGCAGCCCCAAAAACTGAAAAGATCGCTTTATGCCATTGCCCTATAATCTGATAGCCAGCAGCCCCAAAATCTGGGATGATATCCATATGCCACGGCCAAGGGTCCCTGAAAATCTATTATGAAATATCACTAACTTGTTCTCGATTGAATCGCCTGCAAATTTGGGGTCAGGGCCAATACTACTGTTTGGAATGATTCTTGGCTTCTAAATGATCCTTTGCCAGTGCCACACGTCCTCTCTCTCGATTCAAATAAATGTGGGATTTGAATGCAAAAACTTGGAATTTTTCTGAGAAGGAACCTCAGAGATGTTGAAATTGAGGAAGGGTCTACCTTTTTTCTCCATATGGCATATCTCCTCCCTTTGGTTTAGTACTTCCCTTGACACAATTCTTTGAAAGCTGGTAACAAAGGACCTATTTTGCAGCAACTCTCTATTTGTCAACACATCATACAACTATCCAAATTCCTATTGGCTGGCAAATTGCAAGAAACCCATGATTTGTTCCTCTGCCCCCTCTGCTTTTGTGAATTTTGTCAAATATGTGAATGGAATTAGTATCTCCACTTGCTTGTAATTTCGATTGAGGATGCCGTACGTTAAGACCATTGAGTTGTGACTTAATCCTCTTCTGTTAGCGATTGTTGCTAATGCATTTTTATGTACAATATTGTTTTCCTGAATTTGAGGCTATTTTTGCCTTTCTTCATGTGTATTAAGCATGCTTTGGCATCCCTTATATAGGTTGGAGAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTCGAAAGACTTCCTTTCGGTAAAAGACGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGGGAATGGTCAATTGAGCAGGTAATTTTCCTCTGCATAGATCAACATTTTTCTATTAGAAGTAATTATATCAGTGGGTTCTCTACATCTCTCAACCCTTTTATTGAACATCAATTCCACAAACCATGAATTTCATAACTGCGTAGATTAAATGGCACTCACTTATGTCAATGCAGTTTGGTGAAGACGATGATAGCTTTCAAGATCAAGAAATACATTCAACTTTGTCATATAGTGTTGATGTAAAGCCAAAGCTTCTATTGCCCGTTCGACTTCTTGAGGGGCGGCTTTGTGGTGAGATAAAGGCTAACCTAGTGTGTATTCGAGAAGAAGTACATAAAACCAATTCAACTACCCCCTAATGGATGGATTCGATTCTTCCCCACATTTATATAATGCAATGTTATAAATTCCTTTGATCAAATTCCTGCCCAAGGCAGCATTGGATTTGTCATCATTGTCCAACACAGACAAATGGCTATACTATTTTCTTTCATCATTTATTTTCACTTCGACCTCAAATAACCTCAATTAACTGTAGCTAGAGTGCAT

mRNA sequence

ATGCTTTCCTTTCTCAATTCGTCAGAACCATCGTTTTCTTCTTCTTCTTCTTCTTCTTCACTAACTTCCTCTTCCCTTCCCCGTTTAGCTCCAACTTCTCCGGCCACTACCTCCGCCGCCCTTGCCGTCGTACCTACTTTTAGAGTCCATCCTTCTCTTTCAAGTCTCGCCATCCTCACCACCAAACCAACAACTATCCCTTTCTCTTATTCTTCTACTACTTATCCTCCCAAACATTTTCGTTCTAGGTTCAGAAATTACTATTCCAATTCCGAGCCCACCTTCTCAGACAGAGACGAAAATGGCGATTACTCTGACGTCTCAGATTCTGAAACGATTTTTGATGACGGTGGTGGCTTAAGTATCCAAATCGAGAAGTTGGGTACCAACTCTCGGAGAATTTACTCGAGGATTGGTATTGATGCTCCACTCCAGGCGGTGTGGAATATCTTGACTGATTATGAAAGATTGGCTGATTTCATACCTGGTCTCGCTATCAGCCAAATACTCTTTAAGATTGACAACCATGTTCGGCTCTTTCAGGTTGGAGAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTCGAAAGACTTCCTTTCGGTAAAAGACGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGGGAATGGTCAATTGAGCAGTTTGGTGAAGACGATGATAGCTTTCAAGATCAAGAAATACATTCAACTTTGTCATATAGTGTTGATGTAAAGCCAAAGCTTCTATTGCCCGTTCGACTTCTTGAGGGGCGGCTTTGTGGTGAGATAAAGGCTAACCTAGTGTGTATTCGAGAAGAAGTACATAAAACCAATTCAACTACCCCCTAA

Coding sequence (CDS)

ATGCTTTCCTTTCTCAATTCGTCAGAACCATCGTTTTCTTCTTCTTCTTCTTCTTCTTCACTAACTTCCTCTTCCCTTCCCCGTTTAGCTCCAACTTCTCCGGCCACTACCTCCGCCGCCCTTGCCGTCGTACCTACTTTTAGAGTCCATCCTTCTCTTTCAAGTCTCGCCATCCTCACCACCAAACCAACAACTATCCCTTTCTCTTATTCTTCTACTACTTATCCTCCCAAACATTTTCGTTCTAGGTTCAGAAATTACTATTCCAATTCCGAGCCCACCTTCTCAGACAGAGACGAAAATGGCGATTACTCTGACGTCTCAGATTCTGAAACGATTTTTGATGACGGTGGTGGCTTAAGTATCCAAATCGAGAAGTTGGGTACCAACTCTCGGAGAATTTACTCGAGGATTGGTATTGATGCTCCACTCCAGGCGGTGTGGAATATCTTGACTGATTATGAAAGATTGGCTGATTTCATACCTGGTCTCGCTATCAGCCAAATACTCTTTAAGATTGACAACCATGTTCGGCTCTTTCAGGTTGGAGAGCAAAACTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTCGAAAGACTTCCTTTCGGTAAAAGACGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGGGAATGGTCAATTGAGCAGTTTGGTGAAGACGATGATAGCTTTCAAGATCAAGAAATACATTCAACTTTGTCATATAGTGTTGATGTAAAGCCAAAGCTTCTATTGCCCGTTCGACTTCTTGAGGGGCGGCTTTGTGGTGAGATAAAGGCTAACCTAGTGTGTATTCGAGAAGAAGTACATAAAACCAATTCAACTACCCCCTAA

Protein sequence

MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGLSIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGEDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP*

Homology

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BLAST of Csa6G001770.1 vs. TrEMBL
Match: A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001770 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 7.9e-167
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1


Query: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60
           MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT
Sbjct: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60

Query: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120
           TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180
           SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240
           QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP 299
           DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP
Sbjct: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP 298

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BLAST of Csa6G001770.1 vs. TrEMBL
Match: A0A067HFI2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022784mg PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.5e-64
Identity = 142/282 (50.35%), Postives = 184/282 (65.25%), Query Frame = 1


Query: 28  RLAPTSPATTSAALAVVP-----TFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFRS 87
           R  P S  ++ + L   P     T     S S     +T+ +     +S  +  P+   S
Sbjct: 2   RACPLSLDSSGSCLLFFPISKPATTATSHSTSRFPFTSTRSSIQKTPHSILSVSPEFNLS 61

Query: 88  RFR----NYYSNSEPTFSDRDENGDYSDVSD----SETIFDDGGGLSIQIEKLGTNSRRI 147
           +F+    +Y SN+  +  D +E  D   +S+    S+T    G G+ I+I+KLG NSRRI
Sbjct: 62  QFKRNGTSYCSNTNSSELDIEEEDDDDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRRI 121

Query: 148 YSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFN 207
            S+I IDA L  VW+ILTDYE+LADF+P LA+SQ++ K DN VRL+Q+G+QNLAFG+KFN
Sbjct: 122 RSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFN 181

Query: 208 AKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG----EDDDSFQDQEI 267
           AKG +DCYE DLE  P GK+R I+FKMIEGDF+LFEG+WSIEQF     ED +S   Q+ 
Sbjct: 182 AKGVLDCYEKDLEIFPSGKKRDIEFKMIEGDFQLFEGKWSIEQFNGGKFEDSESLLSQKF 241

Query: 268 HSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHK 293
            +TLSYSVDV+PKL LPVRL+EGRLC EIK NL CIRE   K
Sbjct: 242 QTTLSYSVDVRPKLWLPVRLVEGRLCNEIKTNLSCIREAAKK 283

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BLAST of Csa6G001770.1 vs. TrEMBL
Match: V4U6T6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021459mg PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.5e-64
Identity = 142/282 (50.35%), Postives = 184/282 (65.25%), Query Frame = 1


Query: 28  RLAPTSPATTSAALAVVP-----TFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFRS 87
           R  P S  ++ + L   P     T     S S     +T+ +     +S  +  P+   S
Sbjct: 2   RACPLSLDSSGSCLLFFPISKPATTATSHSTSRFPFTSTRSSIQKTPHSILSVSPEFNLS 61

Query: 88  RFR----NYYSNSEPTFSDRDENGDYSDVSD----SETIFDDGGGLSIQIEKLGTNSRRI 147
           +F+    +Y SN+  +  D +E  D   +S+    S+T    G G+ I+I+KLG NSRRI
Sbjct: 62  QFKRNGTSYCSNTNSSELDIEEEDDDDVLSEEGSGSQTQSLHGDGVCIEIKKLGRNSRRI 121

Query: 148 YSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFN 207
            S+I IDA L  VW+ILTDYE+LADF+P LA+SQ++ K DN VRL+Q+G+QNLAFG+KFN
Sbjct: 122 RSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFN 181

Query: 208 AKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFG----EDDDSFQDQEI 267
           AKG +DCYE DLE  P GK+R I+FKMIEGDF+LFEG+WSIEQF     ED +S   Q+ 
Sbjct: 182 AKGVLDCYEKDLEIFPSGKKRDIEFKMIEGDFQLFEGKWSIEQFNGGKFEDSESLLSQKF 241

Query: 268 HSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHK 293
            +TLSYSVDV+PKL LPVRL+EGRLC EIK NL CIRE   K
Sbjct: 242 QTTLSYSVDVRPKLWLPVRLVEGRLCNEIKTNLSCIREAAKK 283

[Close]

BLAST of Csa6G001770.1 vs. TrEMBL
Match: M5X9F1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017230mg PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63
Identity = 138/285 (48.42%), Postives = 190/285 (66.67%), Query Frame = 1


Query: 22  TSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFR 81
           +++ +P  +PT+ A  +AA A  P++ +  +++     +  P      YSS+   P H  
Sbjct: 3   SANIVPVPSPTASAVAAAATAK-PSYLLLLTVTKANPPSKTPNFAASVYSSSFIKPNHSA 62

Query: 82  SRFRNYYSNSEPTFSDRDENG----DYSDVSDSETIFDDGGGLSIQIEKLGTNSRRIYSR 141
               +   +++ + S++ ++     D  D  D + + +DG G    IEK G N RRI S 
Sbjct: 63  VSHSSCRPHAQCSSSNKFDSAFLSQDDEDDDDDQAVSEDGDG---DIEKTGNNCRRIRSE 122

Query: 142 IGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKG 201
           IGI+APL  VWN+LTDYERLADFIPGLA+ ++L K DN+ RLFQ+G+QNLAFGLKFNAKG
Sbjct: 123 IGIEAPLNTVWNLLTDYERLADFIPGLAVCRLLHKTDNYARLFQIGQQNLAFGLKFNAKG 182

Query: 202 TIDCYENDLERLP-FGKRRVIKFKMIEGDFELFEGEWSIEQFGED---DDSFQDQEIHST 261
            +DCYE  LE LP  G +R I+F M+EGDFE+F+G+WS+++   +   DDS  +Q++H+T
Sbjct: 183 IVDCYETPLEILPNLGHKRDIEFNMVEGDFEIFQGKWSLQRLNREISCDDSLIEQQMHTT 242

Query: 262 LSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHK-TNSTT 298
           LSY VDVKPKL LPVRL+EGRLC EIK NL CIREE  K T+S T
Sbjct: 243 LSYLVDVKPKLWLPVRLVEGRLCKEIKINLACIREEALKLTHSNT 283

[Close]

BLAST of Csa6G001770.1 vs. TrEMBL
Match: I1LAW0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G139600 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.3e-62
Identity = 141/276 (51.09%), Postives = 179/276 (64.86%), Query Frame = 1


Query: 28  RLAPTSPATTSAALAVVPTFRVHPSLSSLAILTTK---PTTIPFSYSSTTYPPKHFRSRF 87
           R  P SP +    L   PT    PS SS +I  T    P      +S +T  P  F+ R 
Sbjct: 2   RAIPVSPESHCVFLFPQPTT---PSFSSNSIAITHSFHPFHFKPHHSLSTPKPCSFKFRS 61

Query: 88  RNYY-SNSEPTFSDRDENGDYSDVSDSETIFDDGGGLSIQIEKLGTNSRRIYSRIGIDAP 147
             Y  S S+PT  + DE  + S V D         G+ I++ KL  NSRRI SRI I+AP
Sbjct: 62  LLYCASKSDPTTLEDDEVSEESLVED---------GVCIEVMKLEKNSRRIQSRISIEAP 121

Query: 148 LQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKGTIDCYE 207
           L AVWNILTDYERLADF+PGLA+SQ+L K DN+ RL Q+G+QN+AFG+KFNAK  +DCYE
Sbjct: 122 LSAVWNILTDYERLADFVPGLAVSQLLQKGDNYARLLQIGQQNIAFGIKFNAKVIVDCYE 181

Query: 208 NDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGEDDDSFQDQ--EIHSTLSYSVDVK 267
            +LE LP G ++ I+FKMIEGDF+LFEG+WSI Q   ++   Q Q  ++ +TLSY+VDVK
Sbjct: 182 KELETLPSGMKQEIEFKMIEGDFQLFEGKWSILQHFNNESCEQSQVRQVSTTLSYTVDVK 241

Query: 268 PKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTT 298
           PK+ LP+RL+EGRLC EIK NLV +R+E  K    T
Sbjct: 242 PKMWLPIRLIEGRLCNEIKTNLVSVRDEAQKVTLKT 265

[Close]

BLAST of Csa6G001770.1 vs. TAIR10
Match: AT4G01650.1 (AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58
Identity = 123/238 (51.68%), Postives = 163/238 (68.49%), Query Frame = 1


Query: 68  FSYSSTTYPPKH--FRSRFRN----YYSNSEPTFSDRDENGDY--SDVSDSETIFDDGGG 127
           FS SST        F  RF +    + SN + T ++ D+  DY  +D    E +  D G 
Sbjct: 44  FSPSSTLLASSRRCFTCRFGDSSPRFNSNEDETETETDDEDDYCLTDGKTEELVVGDDGV 103

Query: 128 LSIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRL 187
           L I+++KL  +SRRI S+IG++A L +VW++LTDYE+L+DFIPGL +S+++ K  N VRL
Sbjct: 104 L-IELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVSELVEKEGNRVRL 163

Query: 188 FQVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQF- 247
           FQ+G+QNLA GLKFNAK  +DCYE +LE LP G+RR I FKM+EGDF+LFEG+WSIEQ  
Sbjct: 164 FQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQLFEGKWSIEQLD 223

Query: 248 ----GEDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHK 293
               GE  D  Q ++  +TL+Y+VDVKPK+ LPVRL+EGRLC EI+ NL+ IR+   K
Sbjct: 224 KGIHGEALD-LQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRTNLMSIRDAAQK 279

[Close]

BLAST of Csa6G001770.1 vs. TAIR10
Match: AT5G08720.1 (AT5G08720.1 Streptomyces cyclase/dehydrase (InterPro:IPR005031))

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17
Identity = 63/194 (32.47%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 102 GDYSDVSDSETIFDDGGGLSI--QIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLAD 161
           GD     DS   FD+ G   +  +++ +    RRI   I +D+  Q+VWN+LTDYERLAD
Sbjct: 65  GDNGLRRDSGLGFDERGERKVRCEVDVISWRERRIRGEIWVDSDSQSVWNVLTDYERLAD 124

Query: 162 FIPGLAIS-QILFKIDNHVRLFQVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIK 221
           FIP L  S +I       + L Q G Q  A      A+  +D +    E L     R + 
Sbjct: 125 FIPNLVWSGRIPCPHPGRIWLEQRGLQR-ALYWHIEARVVLDLH----ECLDSPNGRELH 184

Query: 222 FKMIEGDFELFEGEWSIEQFGEDDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGE 281
           F M++GDF+ FEG+WS++           + + + LSY V+V P+   P   LE  +  +
Sbjct: 185 FSMVDGDFKKFEGKWSVKS--------GIRSVGTVLSYEVNVIPRFNFPAIFLERIIRSD 244

Query: 282 IKANLVCIREEVHK 293
           +  NL  +  +  K
Sbjct: 245 LPVNLRAVARQAEK 245

HSP 2 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 50/157 (31.85%), Postives = 84/157 (53.50%), Query Frame = 1


Query: 138 IGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKG 197
           I + AP+  VW +LT YE L + +P LAIS+IL + +N VR+ Q G + L + +  +A+ 
Sbjct: 341 ITVKAPVCEVWKVLTSYESLPEIVPNLAISKILSRDNNKVRILQEGCKGLLY-MVLHARA 400

Query: 198 TIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGEDDDSFQDQEIHSTLSYS 257
            +D +E         + + I+F+ +EGDF+  EG+W  EQ G           H+ L Y+
Sbjct: 401 VLDLHEI--------REQEIRFEQVEGDFDSLEGKWIFEQLGSH---------HTLLKYT 460

Query: 258 VDVKPK--LLLPVRLLEGRLCGEIKANLVCIREEVHK 293
           V+ K +    L   ++E  +  ++ +NL  IR+ + K
Sbjct: 461 VESKMRKDSFLSEAIMEEVIYEDLPSNLCAIRDYIEK 479

[Close]

BLAST of Csa6G001770.1 vs. NCBI nr
Match: gi|778709027|ref|XP_004138514.2| (PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.1e-166
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1


Query: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60
           MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT
Sbjct: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60

Query: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120
           TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180
           SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240
           QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP 299
           DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP
Sbjct: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTTP 298

[Close]

BLAST of Csa6G001770.1 vs. NCBI nr
Match: gi|659116819|ref|XP_008458275.1| (PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo])

HSP 1 Score: 551.6 bits (1420), Expect = 8.5e-154
Identity = 276/297 (92.93%), Postives = 284/297 (95.62%), Query Frame = 1


Query: 1   MLSFLNSSEPSFSSSSSSSSLTSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILT 60
           M SFLNSSEP++SSSSSSSSLTSSS+ RL+ TSPAT+SAALAVVPTFRVHPSLS LAIL 
Sbjct: 1   MRSFLNSSEPTYSSSSSSSSLTSSSISRLSSTSPATSSAALAVVPTFRVHPSLSRLAILA 60

Query: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120
           TK TTIP SYSSTTYPPKHFRSRFRNYYSNSEPTFSD DENGDYSDVSDSETIFDDGGGL
Sbjct: 61  TKSTTIPSSYSSTTYPPKHFRSRFRNYYSNSEPTFSDSDENGDYSDVSDSETIFDDGGGL 120

Query: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180
            IQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKI NH RLF
Sbjct: 121 CIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIGNHARLF 180

Query: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240
           QVGEQNLAFG KFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE
Sbjct: 181 QVGEQNLAFGFKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTT 298
           DDDSFQDQE+HSTLSYSVDVKPKLLLPVRLLEGRLC EIKANL+CIREEVHKT+STT
Sbjct: 241 DDDSFQDQEVHSTLSYSVDVKPKLLLPVRLLEGRLCSEIKANLMCIREEVHKTSSTT 297

[Close]

BLAST of Csa6G001770.1 vs. NCBI nr
Match: gi|1009148245|ref|XP_015891833.1| (PREDICTED: uncharacterized protein LOC107426226 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 264.2 bits (674), Expect = 2.7e-67
Identity = 150/266 (56.39%), Postives = 180/266 (67.67%), Query Frame = 1


Query: 36  TTSAALAVVPTFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSE--- 95
           ++S++L VV    V+PSL S    TT+           T P     S   N  +NS    
Sbjct: 14  SSSSSLRVV----VNPSLPSSFHATTRTCQTAALARLFTPPRLLCSSSNNNNNTNSSTLL 73

Query: 96  -PTFSDRDENGDYSDVSDSET---IFDDGGGLSIQIEKLGTNSRRIYSRIGIDAPLQAVW 155
            P   D D +G   D+S S++   I  DG  + I++E+ G   RRI SR+ I APL+ VW
Sbjct: 74  PPEDDDDDSDGVVDDLSKSQSQSSICTDG--VQIEMERFGDKGRRILSRVAIQAPLEIVW 133

Query: 156 NILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKGTIDCYENDLER 215
           NILTDYERLADFIPGLA+SQ+L K  N  RLFQ+GEQ LAFGLKFNA G IDCYE +LE 
Sbjct: 134 NILTDYERLADFIPGLAVSQLLHKTSNSARLFQIGEQKLAFGLKFNAGGIIDCYEKELES 193

Query: 216 LPFGKRRVIKFKMIEGDFELFEGEWSIEQF--GEDDDSFQDQEIHSTLSYSVDVKPKLLL 275
           LPFG++R I+FKMIEGDF++FEG+WSIEQ   G +DDS  DQEIH+TLSY VDVKPKL L
Sbjct: 194 LPFGQKRDIEFKMIEGDFQIFEGKWSIEQVDRGREDDSGIDQEIHTTLSYLVDVKPKLWL 253

Query: 276 PVRLLEGRLCGEIKANLVCIREEVHK 293
           PVRL+EGRLC EIK NL CIREE  K
Sbjct: 254 PVRLVEGRLCNEIKVNLACIREEARK 273

[Close]

BLAST of Csa6G001770.1 vs. NCBI nr
Match: gi|645242932|ref|XP_008227754.1| (PREDICTED: uncharacterized protein LOC103327240 isoform X1 [Prunus mume])

HSP 1 Score: 256.5 bits (654), Expect = 5.6e-65
Identity = 137/297 (46.13%), Postives = 188/297 (63.30%), Query Frame = 1


Query: 22  TSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFR 81
           +++ +P  +PT+ A  +AA    P+F +  +++     +  P      YSS+   P H  
Sbjct: 5   SANIVPIPSPTASAAAAAAATAKPSFLLLLTVTKANPPSKTPNFSASVYSSSFIKPNHST 64

Query: 82  SRFRNYYSNSEPTFSDRDENG----DYSDVSDSETIFDDGGG----------------LS 141
               +   +++   S++ ++     D  D  D + + +DG G                + 
Sbjct: 65  VSHSSCRPHAQCLSSNKFDSAFLSQDDEDDDDDQAVSEDGNGDVSINMDAAADDIDIDID 124

Query: 142 IQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQ 201
           ++IEK G N RRI S IGI+APL  VWN+LTDYERLADFIPGLA+ ++L K DN+ RLFQ
Sbjct: 125 VEIEKTGNNCRRIRSEIGIEAPLNTVWNLLTDYERLADFIPGLAVCRLLHKTDNYARLFQ 184

Query: 202 VGEQNLAFGLKFNAKGTIDCYENDLERLP-FGKRRVIKFKMIEGDFELFEGEWSIEQFGE 261
           +G+QNLAFGLKFNAKG +DCYE  LE LP  G RR I+F M+EGDFE+F+G+WS++Q   
Sbjct: 185 IGQQNLAFGLKFNAKGIVDCYETPLETLPNLGHRRDIEFNMVEGDFEIFQGKWSLQQLNR 244

Query: 262 D---DDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTN 295
           +   DDS  +Q++H+TLSY VDVKPKL LP+RL+EGRLC EIK NL CIREE  K N
Sbjct: 245 EISCDDSLIEQQMHTTLSYLVDVKPKLWLPIRLVEGRLCKEIKINLACIREEALKLN 301

[Close]

BLAST of Csa6G001770.1 vs. NCBI nr
Match: gi|645242939|ref|XP_008227757.1| (PREDICTED: uncharacterized protein LOC103327240 isoform X2 [Prunus mume])

HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64
Identity = 136/277 (49.10%), Postives = 182/277 (65.70%), Query Frame = 1


Query: 22  TSSSLPRLAPTSPATTSAALAVVPTFRVHPSLSSLAILTTKPTTIPFSYSSTTYPPKHFR 81
           +++ +P  +PT+ A  +AA    P+F +  +++     +  P      YSS+   P H  
Sbjct: 5   SANIVPIPSPTASAAAAAAATAKPSFLLLLTVTKANPPSKTPNFSASVYSSSFIKPNHST 64

Query: 82  SRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGLSIQIEKLGTNSRRIYSRIGID 141
               +   +++   S++ ++   S   D E   DD      +IEK G N RRI S IGI+
Sbjct: 65  VSHSSCRPHAQCLSSNKFDSAFLSQ--DDEDDDDDQAVSEDEIEKTGNNCRRIRSEIGIE 124

Query: 142 APLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLFQVGEQNLAFGLKFNAKGTIDC 201
           APL  VWN+LTDYERLADFIPGLA+ ++L K DN+ RLFQ+G+QNLAFGLKFNAKG +DC
Sbjct: 125 APLNTVWNLLTDYERLADFIPGLAVCRLLHKTDNYARLFQIGQQNLAFGLKFNAKGIVDC 184

Query: 202 YENDLERLP-FGKRRVIKFKMIEGDFELFEGEWSIEQFGED---DDSFQDQEIHSTLSYS 261
           YE  LE LP  G RR I+F M+EGDFE+F+G+WS++Q   +   DDS  +Q++H+TLSY 
Sbjct: 185 YETPLETLPNLGHRRDIEFNMVEGDFEIFQGKWSLQQLNREISCDDSLIEQQMHTTLSYL 244

Query: 262 VDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTN 295
           VDVKPKL LP+RL+EGRLC EIK NL CIREE  K N
Sbjct: 245 VDVKPKLWLPIRLVEGRLCKEIKINLACIREEALKLN 279

The following BLAST results are available for this feature:

BLAST of Csa6G001770.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCX4_CUCSA	7.9e-167	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001770 PE=4 SV=1	[more]
A0A067HFI2_CITSI	2.5e-64	50.35	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022784mg PE=4 SV=1	[more]
V4U6T6_9ROSI	2.5e-64	50.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021459mg PE=4 SV=1	[more]
M5X9F1_PRUPE	1.3e-63	48.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017230mg PE=4 SV=1	[more]
I1LAW0_SOYBN	5.3e-62	51.09	Uncharacterized protein OS=Glycine max GN=GLYMA_10G139600 PE=4 SV=1	[more]

BLAST of Csa6G001770.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01650.1	1.4e-58	51.68	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT5G08720.1	1.6e-17	32.47	Streptomyces cyclase/dehydrase (InterPro:IPR005031)	[more]

BLAST of Csa6G001770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778709027\|ref\|XP_004138514.2\|	1.1e-166	100.00	PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus]	[more]
gi\|659116819\|ref\|XP_008458275.1\|	8.5e-154	92.93	PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo]	[more]
gi\|1009148245\|ref\|XP_015891833.1\|	2.7e-67	56.39	PREDICTED: uncharacterized protein LOC107426226 isoform X1 [Ziziphus jujuba]	[more]
gi\|645242932\|ref\|XP_008227754.1\|	5.6e-65	46.13	PREDICTED: uncharacterized protein LOC103327240 isoform X1 [Prunus mume]	[more]
gi\|645242939\|ref\|XP_008227757.1\|	2.1e-64	49.10	PREDICTED: uncharacterized protein LOC103327240 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005031	COQ10_START
IPR023393	START-like_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G001770	Csa6G001770	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G001770.1	Csa6G001770.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G001770.1.utr5p1	Csa6G001770.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G001770.1.cds1	Csa6G001770.1.cds1	CDS
Csa6G001770.1.cds2	Csa6G001770.1.cds2	CDS
Csa6G001770.1.cds3	Csa6G001770.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G001770.1.utr3p1	Csa6G001770.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005031	Coenzyme Q-binding protein COQ10, START domain	PFAM	PF03364	Polyketide_cyc	coord: 140..283 score: 2.3
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 134..263 score: 7.
None	No IPR available	PANTHER	PTHR34060	FAMILY NOT NAMED	coord: 81..289 score: 6.2
None	No IPR available	PANTHER	PTHR34060:SF1	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN	coord: 81..289 score: 6.2
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 136..290 score: 1.53