Csa5G152140 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G152140
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein; contains IPR004864 (Late embryogenesis abundant protein, LEA-14), IPR013783 (Immunoglobulin-like fold)
Location	Chr5 : 4722482 .. 4723262 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATAAAGAGCAGGTCAAACCCTTGGCTTCCGCCTCCGCCGAGCTCCGGAGTGACGACCATATCTTTCTTCCTCCTCCTGATCCCAAGCTCCACCTCCATAGAAACAAATATATCATGTGCTGTGGCTGCTTCGCCGCTCTCCTCTTAATCCTTGCCGTCATCGGTATCGTCCTCGGCTTCACCGTCTTCCATATCAAAACCCCAGATATTAAAATTGATTCCCTCTCCTTCCCAAATGACACTTTGAGTTCAAGTAAGTTTGCAATGACTCTTTTGAAATAACGAAAAGTACTCAAAATTGACCAGTACGGTTATACATGAACGATTATTTCTCTTCAAAGTCATTCTAAACTCGTATTTTCTTTCATATTTCTCAGATAGTGGGATAATTGTTGTGGCTAGCGTCTCGGTGAGGAACCCTAATGTTGCGTCGTTCAAATACTCGAAAGCTTCGATCGAGATTTACTACCACGACAAGGTCATCGGCGAGGGCGAGACACCACCAGGAGAGGTTAAGGCGAAAGACACGCTAAGGATGAATGTGACGGTAGAGATTGAACCTTGGAAGATGGATGATGCTTCGAGTTTGATAAAGGATTGGAATTCAGGATCTTTGAGTATAAGTAGCTACACGGAAATTCCTGGAAGAGTGAAAATACTTGGCTCCATCAAGAAAAACTATTTGGTGAAAATAAGCTGTTCATTGACTTACAATTCAAAAAGCAAGACGATTCAAGGACAAGATTGTGATCAACGTGTAAGAATCTCTGTTTAA

mRNA sequence

ATGGCTGATAAAGAGCAGGTCAAACCCTTGGCTTCCGCCTCCGCCGAGCTCCGGAGTGACGACCATATCTTTCTTCCTCCTCCTGATCCCAAGCTCCACCTCCATAGAAACAAATATATCATGTGCTGTGGCTGCTTCGCCGCTCTCCTCTTAATCCTTGCCGTCATCGGTATCGTCCTCGGCTTCACCGTCTTCCATATCAAAACCCCAGATATTAAAATTGATTCCCTCTCCTTCCCAAATGACACTTTGAGTTCAAATAGTGGGATAATTGTTGTGGCTAGCGTCTCGGTGAGGAACCCTAATGTTGCGTCGTTCAAATACTCGAAAGCTTCGATCGAGATTTACTACCACGACAAGGTCATCGGCGAGGGCGAGACACCACCAGGAGAGGTTAAGGCGAAAGACACGCTAAGGATGAATGTGACGGTAGAGATTGAACCTTGGAAGATGGATGATGCTTCGAGTTTGATAAAGGATTGGAATTCAGGATCTTTGAGTATAAGTAGCTACACGGAAATTCCTGGAAGAGTGAAAATACTTGGCTCCATCAAGAAAAACTATTTGGTGAAAATAAGCTGTTCATTGACTTACAATTCAAAAAGCAAGACGATTCAAGGACAAGATTGTGATCAACGTGTAAGAATCTCTGTTTAA

Coding sequence (CDS)

ATGGCTGATAAAGAGCAGGTCAAACCCTTGGCTTCCGCCTCCGCCGAGCTCCGGAGTGACGACCATATCTTTCTTCCTCCTCCTGATCCCAAGCTCCACCTCCATAGAAACAAATATATCATGTGCTGTGGCTGCTTCGCCGCTCTCCTCTTAATCCTTGCCGTCATCGGTATCGTCCTCGGCTTCACCGTCTTCCATATCAAAACCCCAGATATTAAAATTGATTCCCTCTCCTTCCCAAATGACACTTTGAGTTCAAATAGTGGGATAATTGTTGTGGCTAGCGTCTCGGTGAGGAACCCTAATGTTGCGTCGTTCAAATACTCGAAAGCTTCGATCGAGATTTACTACCACGACAAGGTCATCGGCGAGGGCGAGACACCACCAGGAGAGGTTAAGGCGAAAGACACGCTAAGGATGAATGTGACGGTAGAGATTGAACCTTGGAAGATGGATGATGCTTCGAGTTTGATAAAGGATTGGAATTCAGGATCTTTGAGTATAAGTAGCTACACGGAAATTCCTGGAAGAGTGAAAATACTTGGCTCCATCAAGAAAAACTATTTGGTGAAAATAAGCTGTTCATTGACTTACAATTCAAAAAGCAAGACGATTCAAGGACAAGATTGTGATCAACGTGTAAGAATCTCTGTTTAA

Protein sequence

MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV*

Homology

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BLAST of Csa5G152140 vs. Swiss-Prot
Match: Y1465_ARATH (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 49/171 (28.65%), Postives = 88/171 (51.46%), Query Frame = 1


Query: 49  LLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNS-----GIIVVASVSVRNPNV 108
           +++I+  + ++L      I  P+I+  S+S  +     NS        +V+ +S+RN N 
Sbjct: 46  IIVIIFALCLILSSIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNF 105

Query: 109 ASFKYSKASIEIYYHDK-VIGEGETPPGEVKAKDTLRMN-VTVEIEPWKMDDASSLIKDW 168
            +F++  +++ + Y D  V+GE +     V+A  T+R+  V VEI  +++ D   L KD 
Sbjct: 106 GAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL 165

Query: 169 NSGSLSISSYTEIPGRVKILGSIKKNYLVKI-SCSLTYNSKSKTIQGQDCD 212
             G L + S  E+ GR+K+LG  +K + V + SC++  N   + IQ   C+
Sbjct: 166 RLGFLELRSVAEVRGRIKVLG--RKRWKVSVMSCTMRLNLTGRFIQNLLCE 214

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BLAST of Csa5G152140 vs. TrEMBL
Match: A0A0A0KMH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152140 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 2.6e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60

Query: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120

Query: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180
           VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI
Sbjct: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180

Query: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 219
           LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV
Sbjct: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 218

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BLAST of Csa5G152140 vs. TrEMBL
Match: M5WS18_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021244mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-48
Identity = 106/223 (47.53%), Postives = 149/223 (66.82%), Query Frame = 1


Query: 1   MADKEQVKPLASASA-ELRSDDH-IFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGI 60
           MA KEQ KPLA A++  LRSD+  +F+      + L + KY+MCCGC +AL LI+AV  I
Sbjct: 1   MAAKEQGKPLAPANSYHLRSDEEEVFV---SSHIKLCQRKYVMCCGCVSALFLIIAVTAI 60

Query: 61  VLGFTVFHIKTP-----DIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASI 120
           VLGFTVFH+K P     D+ I  L   N  L S++ + ++A VS++NPNVASFKY   + 
Sbjct: 61  VLGFTVFHVKGPRIKMNDVTIQQLEVANGALRSDTNVTLLADVSIKNPNVASFKYGNTTT 120

Query: 121 EIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTE 180
            +YY    +G+G TP G  KA+ T+RMNVTV+I P ++      IK+  SG L++S+YT 
Sbjct: 121 RVYYSGTEVGQGRTPAGVAKARRTMRMNVTVDIVPGEISAVPGFIKEVASGKLTVSTYTR 180

Query: 181 IPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 217
           I G+VKIL  + KN +V+++CS+TYN  SK I+G+DC +RV +
Sbjct: 181 IEGKVKIL-MVNKNVVVELNCSMTYNFASKGIEGEDCKRRVSL 219

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BLAST of Csa5G152140 vs. TrEMBL
Match: A0A061G639_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS=Theobroma cacao GN=TCM_016356 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.6e-45
Identity = 103/216 (47.69%), Postives = 145/216 (67.13%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           MAD+EQVKPLA A+ + RSDD   L     +L L R +YI CCGC AALLLI AV+ +VL
Sbjct: 1   MADREQVKPLAPAAFQTRSDDEEAL---SKQLKLKRRRYIQCCGCVAALLLIQAVVILVL 60

Query: 61  GFTVFHIKTPDIKIDSLS------FPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIE 120
            FTVF I+ P I+++S++      F N +L ++  + ++A VSV+NPNVA+FK++ ++  
Sbjct: 61  FFTVFRIQDPMIRMNSVTIQRLEFFQNGSLRTDVNVTLLADVSVKNPNVAAFKFNNSTTL 120

Query: 121 IYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEI 180
           IYY  +V+GEG    G+ KA+ TLR NVTV+I P K+    SL+ D+ S +L+ISSYT I
Sbjct: 121 IYYGGRVVGEGHHLQGKAKARRTLRRNVTVDIIPEKILAVPSLMSDFASQALNISSYTRI 180

Query: 181 PGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDC 211
            GRV+IL  IKK  +VK +C++TY    +   G+ C
Sbjct: 181 SGRVRILNFIKKKVVVKFNCTMTYRLSGQEFHGESC 213

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BLAST of Csa5G152140 vs. TrEMBL
Match: W9SLI7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006687 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.4e-41
Identity = 95/228 (41.67%), Postives = 139/228 (60.96%), Query Frame = 1


Query: 1   MAD-KEQVKPLASASAELRSDDHIFLPPPDPK-----LHLHRNKYIMCCGCFAALLLILA 60
           MAD KEQVKPLA A    RSD+       D K         RN  +  CGC +A+L+I A
Sbjct: 1   MADRKEQVKPLAPAFYLFRSDEEDNTNNDDNKNKSFFADRRRNSCVKRCGCASAILVIAA 60

Query: 61  VIGIVLGFTVFHIKTPDIKIDSLS------FPNDTLSSNSGIIVVASVSVRNPNVASFKY 120
           V  ++L  TVFH+K P +K+ S++      + N T+ ++  + +VA VSV+NPN ASF+Y
Sbjct: 61  VTMMILAITVFHVKGPIVKMTSVTVDPLQTYANGTIDTDKNVTLVAGVSVKNPNAASFRY 120

Query: 121 SKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSI 180
           +  +  ++Y    +GEG    G+ KA+ T++MN+TVEI   KM ++  L+KDW SG L+ 
Sbjct: 121 ANTTTTVFYGGAAVGEGWNAAGKAKARRTVKMNLTVEISTAKMLESPGLLKDWGSGELTF 180

Query: 181 SSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 217
            SYT I GRVKI   +KK  +VK++C+++YN  SK I+ Q C + V +
Sbjct: 181 DSYTRIEGRVKITDVVKKKVVVKLNCTVSYNVSSKGIERQHCKRHVSL 228

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BLAST of Csa5G152140 vs. TrEMBL
Match: A0A067K8E9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14326 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-40
Identity = 93/221 (42.08%), Postives = 139/221 (62.90%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           M + EQV+PLA A     SDD            + R + I CCGC AA+ LILA++ ++L
Sbjct: 1   MVEGEQVRPLAPARDRTSSDDE---EAAHQLKKIRRRRCIKCCGCIAAVSLILAIVIVIL 60

Query: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGI-------IVVASVSVRNPNVASFKYSKASI 120
            FTVF IK P+I+++ ++     L +N+ I        ++A VSV+NPN+ASFKY+  S 
Sbjct: 61  IFTVFRIKNPNIRLNGITITQLELINNTNIPKPGVNISLIADVSVKNPNIASFKYNNTST 120

Query: 121 EIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTE 180
            ++Y+ +++GE   PPG  KA+ T+RMNVTVEI   K+    +L  +  SG L++SSY++
Sbjct: 121 ALFYYGELVGEARGPPGRAKARRTMRMNVTVEIITDKLISNPNLNTEAGSGLLTMSSYSK 180

Query: 181 IPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRV 215
           IPGRVK+   IKK+  VK++C++T N  S+ IQ Q C ++V
Sbjct: 181 IPGRVKLFHIIKKHATVKMNCTITVNISSQAIQTQKCKRKV 218

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BLAST of Csa5G152140 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 83/223 (37.22%), Postives = 122/223 (54.71%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           MAD E V+PLA A+    SD+           H  RN+ I C  C  A  LIL  I + L
Sbjct: 1   MADSEHVRPLAPATILPVSDESA---SNIKNTHRSRNR-IKCSICVTATSLILTTIVLTL 60

Query: 61  GFTVFHIKTPDIK--------IDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKAS 120
            FTVF +K P IK        +DS++  N      + I ++  VSV+NPN ASFKYS  +
Sbjct: 61  VFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTT 120

Query: 121 IEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWN-SGSLSISSY 180
            +IYY   ++GE    PG+ +   T RMNVTV+I   ++     L ++ + SG +++ SY
Sbjct: 121 TDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSY 180

Query: 181 TEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRV 215
           T + G+VKI+G +KK+  VK++C++  N   + IQ  DC +++
Sbjct: 181 TRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDCKKKI 219

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BLAST of Csa5G152140 vs. TAIR10
Match: AT4G23610.1 (AT4G23610.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 70/222 (31.53%), Postives = 110/222 (49.55%), Query Frame = 1


Query: 3   DKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKY-------IMCCGCFAALLLILAV 62
           +++Q KPLA      RSD     P  + + H  R KY       I+CCG  A+L +++AV
Sbjct: 9   NEDQAKPLAPLFLTTRSDQ----PDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAV 68

Query: 63  IGIVLGFTVFHIKTPDIKIDSLS------FPNDTLSSNSGIIVVASVSVRNPNVASFKYS 122
             IVL  TVFH+ +P++ +DS+S      F N  +++N    V   +S+ NPN A F   
Sbjct: 69  TFIVLSLTVFHLHSPNLTVDSISFNQRFDFVNGKVNTNQNTTVSVEISLHNPNPALFIVK 128

Query: 123 KASIEIYYHD-KVIGEGETPPGEVKAKDTLRMNVTVEIEPWK-MDDASSLIKDWNSGSLS 182
             ++  Y+ +  V+GE       + AK T++MN+T EI   K +     L++D N   + 
Sbjct: 129 NVNVSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDLNGRGVD 188

Query: 183 ISSYTEIPGRVKILGSIKKNYLVKISCSL---TYNSKSKTIQ 207
           + S  E+ GRVK +   +K   ++  C +   T N  + T Q
Sbjct: 189 LKSSVEVRGRVKKMKIFRKTVHLQTDCFMKMTTNNFLTPTFQ 226

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BLAST of Csa5G152140 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 91.3 bits (225), Expect = 8.1e-19
Identity = 55/214 (25.70%), Postives = 98/214 (45.79%), Query Frame = 1


Query: 25  LPPPDPKLH--------------LHRNKYIMCCGCFAALLLIL-AVIGIVLGFTVFHIKT 84
           LPPP P                 L R +    C CF  LL++L A++ ++L FT+F  K 
Sbjct: 22  LPPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKR 81

Query: 85  PDIKIDSLSFPNDTLSSNSGIIVV-------ASVSVRNPNVASFKYSKASIEIYYHDKVI 144
           P   IDS++      S N  ++ V         +S++NPN   F Y  +S  + Y  +VI
Sbjct: 82  PTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVI 141

Query: 145 GEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKILG 204
           GE   P   + A+ T+ +N+T+ +   ++   + L+ D  +G + ++++ ++ G+V +L 
Sbjct: 142 GEAPLPANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLK 201

Query: 205 SIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 217
             K       SC L+ +   + +  Q C    ++
Sbjct: 202 IFKIKVQSSSSCDLSISVSDRNVTSQHCKYSTKL 235

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BLAST of Csa5G152140 vs. TAIR10
Match: AT1G64065.1 (AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 49/171 (28.65%), Postives = 88/171 (51.46%), Query Frame = 1


Query: 49  LLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNS-----GIIVVASVSVRNPNV 108
           +++I+  + ++L      I  P+I+  S+S  +     NS        +V+ +S+RN N 
Sbjct: 46  IIVIIFALCLILSSIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNF 105

Query: 109 ASFKYSKASIEIYYHDK-VIGEGETPPGEVKAKDTLRMN-VTVEIEPWKMDDASSLIKDW 168
            +F++  +++ + Y D  V+GE +     V+A  T+R+  V VEI  +++ D   L KD 
Sbjct: 106 GAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL 165

Query: 169 NSGSLSISSYTEIPGRVKILGSIKKNYLVKI-SCSLTYNSKSKTIQGQDCD 212
             G L + S  E+ GR+K+LG  +K + V + SC++  N   + IQ   C+
Sbjct: 166 RLGFLELRSVAEVRGRIKVLG--RKRWKVSVMSCTMRLNLTGRFIQNLLCE 214

[Close]

BLAST of Csa5G152140 vs. TAIR10
Match: AT4G23930.1 (AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 45/177 (25.42%), Postives = 83/177 (46.89%), Query Frame = 1


Query: 43  CGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV-SVRNP 102
           C      ++ L +  + +  TVF  + P+I + S+  P+ +++++S     +   +VRNP
Sbjct: 11  CAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFSAVRNP 70

Query: 103 NVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS----- 162
           N A+F +    I+++Y+   IG    P GE+++  T RM  T  ++ + +  ASS     
Sbjct: 71  NRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAASSSQISA 130

Query: 163 ---LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDC 211
                 D +  ++ I S  E+ GRV++LG        K +C +  +S   +I    C
Sbjct: 131 AQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIVAVRC 187

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BLAST of Csa5G152140 vs. NCBI nr
Match: gi|700194872|gb|KGN50049.1| (hypothetical protein Csa_5G152140 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 3.8e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60

Query: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120

Query: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180
           VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI
Sbjct: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180

Query: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 219
           LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV
Sbjct: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 218

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BLAST of Csa5G152140 vs. NCBI nr
Match: gi|778708243|ref|XP_004143964.2| (PREDICTED: uncharacterized protein LOC101212153 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 3.8e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL
Sbjct: 233 MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 292

Query: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK
Sbjct: 293 GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 352

Query: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180
           VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI
Sbjct: 353 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 412

Query: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 219
           LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV
Sbjct: 413 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 450

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BLAST of Csa5G152140 vs. NCBI nr
Match: gi|659073969|ref|XP_008437350.1| (PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 2.1e-109
Identity = 202/218 (92.66%), Postives = 214/218 (98.17%), Query Frame = 1


Query: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60
           MADKEQVKPLASA+AELRSDDHIFLPPP PKL+L+RNKYI CCGCF+ALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASATAELRSDDHIFLPPP-PKLNLYRNKYIKCCGCFSALLLILAVIGIVL 60

Query: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKAS +IYYH+K
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNK 120

Query: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180
           VIGEGETPPGEVKAKDTL+MNVTV+IEPWK+DDASSLIKDWNSG+LSISSYTEIPGRVK+
Sbjct: 121 VIGEGETPPGEVKAKDTLKMNVTVKIEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKL 180

Query: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 219
           LG+IKKNYLVKISCSLTYNSKSKTIQ QDCDQRVRISV
Sbjct: 181 LGAIKKNYLVKISCSLTYNSKSKTIQRQDCDQRVRISV 217

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BLAST of Csa5G152140 vs. NCBI nr
Match: gi|595859288|ref|XP_007210919.1| (hypothetical protein PRUPE_ppa021244mg [Prunus persica])

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-48
Identity = 106/223 (47.53%), Postives = 149/223 (66.82%), Query Frame = 1


Query: 1   MADKEQVKPLASASA-ELRSDDH-IFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGI 60
           MA KEQ KPLA A++  LRSD+  +F+      + L + KY+MCCGC +AL LI+AV  I
Sbjct: 1   MAAKEQGKPLAPANSYHLRSDEEEVFV---SSHIKLCQRKYVMCCGCVSALFLIIAVTAI 60

Query: 61  VLGFTVFHIKTP-----DIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASI 120
           VLGFTVFH+K P     D+ I  L   N  L S++ + ++A VS++NPNVASFKY   + 
Sbjct: 61  VLGFTVFHVKGPRIKMNDVTIQQLEVANGALRSDTNVTLLADVSIKNPNVASFKYGNTTT 120

Query: 121 EIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTE 180
            +YY    +G+G TP G  KA+ T+RMNVTV+I P ++      IK+  SG L++S+YT 
Sbjct: 121 RVYYSGTEVGQGRTPAGVAKARRTMRMNVTVDIVPGEISAVPGFIKEVASGKLTVSTYTR 180

Query: 181 IPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 217
           I G+VKIL  + KN +V+++CS+TYN  SK I+G+DC +RV +
Sbjct: 181 IEGKVKIL-MVNKNVVVELNCSMTYNFASKGIEGEDCKRRVSL 219

[Close]

BLAST of Csa5G152140 vs. NCBI nr
Match: gi|658036772|ref|XP_008353940.1| (PREDICTED: uncharacterized protein LOC103417542 [Malus domestica])

HSP 1 Score: 194.5 bits (493), Expect = 1.9e-46
Identity = 104/219 (47.49%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 4   KEQVKPLASASAE-LRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVLGF 63
           KEQVKPLA A++  LRSD+          + L + KY+ CCGC +A+ LI+AV  IVLGF
Sbjct: 5   KEQVKPLALANSHYLRSDEE---EVASLHIKLKQRKYVHCCGCVSAVFLIIAVTAIVLGF 64

Query: 64  TVFHIKTPDIKIDS-----LSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYY 123
           TVFH+K P IK++      L F N  L +++ I ++A VSV+NPNVASFKYS A+  +YY
Sbjct: 65  TVFHVKDPKIKMNKVTVQRLEFANGNLRTDTNITLLADVSVKNPNVASFKYSNATTLVYY 124

Query: 124 HDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGR 183
               +GEG TP G  KA+ T RMNVTV+I P K+     L+++  SG L++++YT I G+
Sbjct: 125 SGTEVGEGRTPAGVAKARRTSRMNVTVDIVPGKILGVPGLMREVASGELTMTTYTRIQGK 184

Query: 184 VKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 217
           VK++  +KKN +V+++C++ YN  S  IQG+DC +RVR+
Sbjct: 185 VKVV-MVKKNVVVELNCTVRYNFSSGEIQGKDCKRRVRL 219

The following BLAST results are available for this feature:

BLAST of Csa5G152140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1465_ARATH	1.8e-12	28.65	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g640...	[more]

BLAST of Csa5G152140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMH1_CUCSA	2.6e-119	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152140 PE=4 SV=1	[more]
M5WS18_PRUPE	1.9e-48	47.53	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021244mg PE=4 SV=1	[more]
A0A061G639_THECC	5.6e-45	47.69	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS...	[more]
W9SLI7_9ROSA	8.4e-41	41.67	Uncharacterized protein OS=Morus notabilis GN=L484_006687 PE=4 SV=1	[more]
A0A067K8E9_JATCU	2.5e-40	42.08	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14326 PE=4 SV=1	[more]

BLAST of Csa5G152140 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46150.1	1.4e-31	37.22	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G23610.1	5.4e-23	31.53	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT3G54200.1	8.1e-19	25.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G64065.1	1.0e-13	28.65	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G23930.1	1.3e-13	25.42	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Csa5G152140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194872\|gb\|KGN50049.1\|	3.8e-119	100.00	hypothetical protein Csa_5G152140 [Cucumis sativus]	[more]
gi\|778708243\|ref\|XP_004143964.2\|	3.8e-119	100.00	PREDICTED: uncharacterized protein LOC101212153 [Cucumis sativus]	[more]
gi\|659073969\|ref\|XP_008437350.1\|	2.1e-109	92.66	PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo]	[more]
gi\|595859288\|ref\|XP_007210919.1\|	2.7e-48	47.53	hypothetical protein PRUPE_ppa021244mg [Prunus persica]	[more]
gi\|658036772\|ref\|XP_008353940.1\|	1.9e-46	47.49	PREDICTED: uncharacterized protein LOC103417542 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2
IPR013783	Ig-like_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G152140.1	Csa5G152140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 96..195 score: 2.0
IPR013783	Immunoglobulin-like fold	GENE3D	G3DSA:2.60.40.10		coord: 87..174 score: 3.
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 1..218 score: 2.0
None	No IPR available	PANTHER	PTHR31852:SF23	SUBFAMILY NOT NAMED	coord: 1..218 score: 2.0
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 51..153 score: 6.02

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G152140	Cla011406	Watermelon (97103) v1	cuwmB408
Csa5G152140	MELO3C021179	Melon (DHL92) v3.5.1	cumeB385
Csa5G152140	ClCG06G003400	Watermelon (Charleston Gray)	cuwcgB399
Csa5G152140	ClCG01G002260	Watermelon (Charleston Gray)	cuwcgB364
Csa5G152140	Lsi09G015980	Bottle gourd (USVL1VR-Ls)	culsiB333
Csa5G152140	Lsi09G002080	Bottle gourd (USVL1VR-Ls)	culsiB322
Csa5G152140	MELO3C021179.2	Melon (DHL92) v3.6.1	cumedB369
Csa5G152140	Cla97C01G002300	Watermelon (97103) v2	cuwmbB336
Csa5G152140	Cla97C06G112770	Watermelon (97103) v2	cuwmbB389
Csa5G152140	Bhi12G000163	Wax gourd	cuwgoB437
Csa5G152140	CSPI05G04930	Wild cucumber (PI 183967)	cpicuB240
Csa5G152140	CSPI06G00820	Wild cucumber (PI 183967)	cpicuB309
Csa5G152140	Cucsa.135790	Cucumber (Gy14) v1	cgycuB194
Csa5G152140	Cucsa.303600	Cucumber (Gy14) v1	cgycuB434
Csa5G152140	CmaCh02G014190	Cucurbita maxima (Rimu)	cmacuB608
Csa5G152140	CmaCh17G004580	Cucurbita maxima (Rimu)	cmacuB366
Csa5G152140	CmoCh02G014510	Cucurbita moschata (Rifu)	cmocuB598
Csa5G152140	Cp4.1LG05g03220	Cucurbita pepo (Zucchini)	cpecuB736
Csa5G152140	CsGy6G000890	Cucumber (Gy14) v2	cgybcuB278
Csa5G152140	CsGy5G002240	Cucumber (Gy14) v2	cgybcuB224
Csa5G152140	Carg02560	Silver-seed gourd	carcuB0939

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa5G152140	Csa6G006820	Cucumber (Chinese Long) v2	cucuB164

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G152140	Watermelon (97103) v1	cuwmB399
Csa5G152140	Watermelon (97103) v1	cuwmB407
Csa5G152140	Cucurbita pepo (Zucchini)	cpecuB174
Csa5G152140	Cucurbita pepo (Zucchini)	cpecuB432
Csa5G152140	Bottle gourd (USVL1VR-Ls)	culsiB381
Csa5G152140	Cucumber (Gy14) v2	cgybcuB126
Csa5G152140	Cucumber (Gy14) v2	cgybcuB182
Csa5G152140	Melon (DHL92) v3.6.1	cumedB336
Csa5G152140	Melon (DHL92) v3.6.1	cumedB388
Csa5G152140	Melon (DHL92) v3.6.1	cumedB394
Csa5G152140	Watermelon (97103) v2	cuwmbB382
Csa5G152140	Watermelon (97103) v2	cuwmbB388
Csa5G152140	Cucumber (Chinese Long) v2	cucuB097
Csa5G152140	Cucumber (Chinese Long) v2	cucuB141
Csa5G152140	Cucumber (Gy14) v1	cgycuB130
Csa5G152140	Cucurbita maxima (Rimu)	cmacuB298
Csa5G152140	Cucurbita maxima (Rimu)	cmacuB343
Csa5G152140	Cucurbita maxima (Rimu)	cmacuB734
Csa5G152140	Cucurbita moschata (Rifu)	cmocuB286
Csa5G152140	Cucurbita moschata (Rifu)	cmocuB330
Csa5G152140	Cucurbita moschata (Rifu)	cmocuB728
Csa5G152140	Melon (DHL92) v3.5.1	cumeB357
Csa5G152140	Melon (DHL92) v3.5.1	cumeB404
Csa5G152140	Melon (DHL92) v3.5.1	cumeB407
Csa5G152140	Watermelon (Charleston Gray)	cuwcgB393