Cp4.1LG05g03220 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g03220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative
Location	Cp4.1LG05 : 2049655 .. 2052671 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCTCAAAAACGAACCGTCCAACAAATGCTTCATCTACCTCTTCTCCGCCTTCGTCTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGTAAGTTTTCCATCTCTAATACTAATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCGTCGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGCGGCGTCATCGTCGGCGAAAGGAGTAGTGGCGGGGGTAGGGCTGAGGCGAAGGGGACGACGAGGATGAATGTTTCTGTTGAAGGTTCTGTGGAGAATGTTAGCAGCGATTTGAATGGTTCGGGGATTTTAAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCGTTTGATTCATGTTTTAAGGAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTAATCTGGATTTGAATACTCATCAAATTCTGCCTCGTTGGGTTTGTGAGTGATTTAGAATCATAGTTTTTGATGAACTCGAGAACCCTAATTACTCTCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATGTTCATTTAAATGTTTATCAGAGACAATTAAAACCCATTAAAGACCTCAATTAATGGGAAAATATGAACCACCGTTTTATCATATATCCCCTTTCACTTCTATAAAACCATTCCTTTCACAGCCCCACAAATCCCCTCATACTCCTCCACCACCAACCGGAATCAATGGCGGCCGACGAAACATCTGGCGACTTGCCGGCGACACTCCGATCAAGGCGAAAAGCATCAGAAAAATACATCAATACCTCCTGCATTTACCTCTTCGCTATCGCTTCCATTGCCTGCATCATCGCCCTGACCCTCTGTCTTCCATCGCAGTAAAAAATCTGCACTACGGCTCCTCGCCGACCCCTCCCATGGATGCCACATTAATCGCCGAATTAACATGGGAAAATCCCAATGGGGAGGTGTTAGATGAACCCGACTCTCTATAATAGTATAATATTGTCTAATTGGGAGGGGTTAGATGAACCGGAATCTCCATAATAGTATAATATTGGGAGGTATTGTCTAATTGGGAGGTGTTAGATGAACCGGATTCTCCAAAAGGTCTTAGAGCATTCTGGATTTAGGGATTCTCCAAAAGGTCTTAGAGCATTCTGGATTATAATCCTATGTTCCCGTGAGACTTTCATCATTCAACATGAGGAATAAAACAAACATCAGGTCGATTTACATTGGGCGTGATCGGCGAGGTGAAAAGGGTCGTCTGTAAATGCAGTGGGTATTAAAAACAGGAAGTTTACAGTGAAAGTGAAACTGAATCCGAGCTTGAAAAATGGTTGGATGTGACCAATTTTTTTTTTTGCCTAATTTTCTGTTCCCTTTTTCCACAGCAATTTTTCCAACCTAATGACCTTGAAAAAGAAACCTACGATGTTAACCAAAAAAATCTTAATACCTTTTAATTTATAAAATTTCTTTAATTGCTTCATACATATTAATTTTACCTTACTAACTTTAATTAATGATGTATTATTTATTGCATTCTAAGACTTAATTTCACCATAACTTCAATTTGATTTATATAATTTTTTTTTAAAATTTGTTCTATATAATTTGGTCAAATATTTTAAACTAAAAAAAAAAAAAAAAACAAATAATAAATCAATAATATGAATGGATAGTTCTTAGATAACAACTAATATTAAATAGAAACATAATTATTTTTTGTTTAGAAAATTCAATACTAAATTGCCATAATTCTAAAATAAAAAAATACCAAATTTTGTAATTTAAAATTATTTATATTCATATCCTTCTTGACGTACAAGTTATTCAAAGCTAATCGAGTCAACCTTTTGCCCAAATCAACACGCATTTTTGACAAACTAATTATTTTAAAAAACACTGACTTTTATAATTCTAAAATAAAATAAAAATTAAAAATAAAAATGAATTTGAAATCCCAACAATTAAATACCCAACATATCCCTTCTTTTACGATCATTTCCCCCATAGCCATGGCCGAGAAAGACCAGGTCAAACCCTTGGCTTCCCCCGCCACCCATCTCCGGAGCGACGACGATCACTTTCTTCCTCCTCCGGCCAAGCTCCGCCTCCATAGAAACAAATACATCATGTGCTCTGGCTGCTTCGCCGCTCTCCTCTTGATCCTCGCCGTTATCGGCATCGTCCTCGGCTTCACCGTCCTCCATATCAAAACCCCAGATCTCAAAATCGATAAGCTCTCGTTTTCAAATGCTACTTCAAGTAAGTTTAACGTTAGAAGAATTTGATTATGTCAAAAAAAAAAAAAAATGGAATCGTTAGAGTATTGTTAGGAATTTAATTTAATTATTTGCGTGTTAGTTCACTAATGTCGAAAATTCCAATTATTTATGTTTCTCGCTTAGTTGTTGTTATGTCAAAATCTAACACTTAAATGAGTTTTAATAATCATTTAAAATTCACTGTTCTTCTTTATCAGACGGCGGCATAATCATTGTGGCTAGTGTCTTCGTGCGGAATCCTAATTTCGCGTCGTTCAAATACTCAAAAGCGACGACGGTGATTTACTACCACGGCGAGGTGATCGGAGAGGGAGAGACGCCAGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAGGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTAAATATCAGTAGCTACACGGAAATTCCAGGAAGGGTCAAAATAATTGGATTCATCAAGAAAAAGTTTGCGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAA

mRNA sequence

TTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCTCAAAAACGAACCGTCCAACAAATGCTTCATCTACCTCTTCTCCGCCTTCGTCTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGTAAGTTTTCCATCTCTAATACTAATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCGTCGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGCGGCGTCATCGTCGGCGAAAGGAGTAGTGGCGGGGGTAGGGCTGAGGCGAAGGGGACGACGAGGATGAATGTTTCTGTTGAAGGTTCTGTGGAGAATGTTAGCAGCGATTTGAATGGTTCGGGGATTTTAAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCGTTTGATTCATGTTTTAAGGAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTAATCTGGATTTGAATACTCATCAAATTCTGCCTCCCATGGCCGAGAAAGACCAGGTCAAACCCTTGGCTTCCCCCGCCACCCATCTCCGGAGCGACGACGATCACTTTCTTCCTCCTCCGGCCAAGCTCCGCCTCCATAGAAACAAATACATCATTGTCTTCGTGCGGAATCCTAATTTCGCGTCGTTCAAATACTCAAAAGCGACGACGGTGATTTACTACCACGGCGAGGTGATCGGAGAGGGAGAGACGCCAGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAGGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTAAATATCAGTAGCTACACGGAAATTCCAGGAAGGGTCAAAATAATTGGATTCATCAAGAAAAAGTTTGCGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAA

Coding sequence (CDS)

TTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCTCAAAAACGAACCGTCCAACAAATGCTTCATCTACCTCTTCTCCGCCTTCGTCTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGTAAGTTTTCCATCTCTAATACTAATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCGTCGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGCGGCGTCATCGTCGGCGAAAGGAGTAGTGGCGGGGGTAGGGCTGAGGCGAAGGGGACGACGAGGATGAATGTTTCTGTTGAAGGTTCTGTGGAGAATGTTAGCAGCGATTTGAATGGTTCGGGGATTTTAAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCGTTTGATTCATGTTTTAAGGAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTAATCTGGATTTGAATACTCATCAAATTCTGCCTCCCATGGCCGAGAAAGACCAGGTCAAACCCTTGGCTTCCCCCGCCACCCATCTCCGGAGCGACGACGATCACTTTCTTCCTCCTCCGGCCAAGCTCCGCCTCCATAGAAACAAATACATCATTGTCTTCGTGCGGAATCCTAATTTCGCGTCGTTCAAATACTCAAAAGCGACGACGGTGATTTACTACCACGGCGAGGTGATCGGAGAGGGAGAGACGCCAGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAGGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTAAATATCAGTAGCTACACGGAAATTCCAGGAAGGGTCAAAATAATTGGATTCATCAAGAAAAAGTTTGCGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAA

Protein sequence

FPLPHSQAHHKTLKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSVDNSNFGPFIFDYVTVVFMYGGVIVGERSSGGGRAEAKGTTRMNVSVEGSVENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKRIWSEISCSINLDLNTHQILPPMAEKDQVKPLASPATHLRSDDDHFLPPPAKLRLHRNKYIIVFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDCDQ

Homology

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BLAST of Cp4.1LG05g03220 vs. Swiss-Prot
Match: Y1465_ARATH (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-11
Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 1


Query: 16  EPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNL 75
           EP  KC +Y  +  V +    LI S I LR++ P I+  SIS R    S  NS++   N 
Sbjct: 34  EPPGKCLVYSLTIIVIIFALCLILSSIFLRISKPEIETRSISTRDLR-SGGNSTNPYFNA 93

Query: 76  TLIAEFSVDNSNFGPFIFDYVTVVFMYGG-VIVGERSSGGGRAEAKGTTRM-NVSVE-GS 135
           TL+++ S+ NSNFG F F+  T+  +Y    +VGE    G R EA  T R+  V VE GS
Sbjct: 94  TLVSDISIRNSNFGAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGS 153

Query: 136 -----VENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKRIW--SEISCSINLDL 181
                 +++  DL   G L + S A+  GRI+   VL ++ W  S +SC++ L+L
Sbjct: 154 FRLLDTKDLDKDLR-LGFLELRSVAEVRGRIK---VLGRKRWKVSVMSCTMRLNL 203

[Close]

BLAST of Cp4.1LG05g03220 vs. TrEMBL
Match: A0A0A0KQT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.3e-55
Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 1


Query: 1   FPLPHSQAHHKT-----------LKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSP 60
           FPL H QAHHK            L+ E SNKCFIY+FS FVFL VALLIF+LIVLRVNSP
Sbjct: 8   FPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALIVLRVNSP 67

Query: 61  TIDLSSISVRKFSISNTNSSSS--SLNLTLIAEFSVDNSNFGPFIFDYVTVVFMYGGVIV 120
           +I LSSIS  + S+SN  +SSS  SLNL+  AEF+VDNSNFGPF FD  TV  +YGG+I 
Sbjct: 68  SISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGLVYGGMIF 127

Query: 121 GERSSGGGRAEAKGTTRMNVSVEGSVENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKR 180
           GERS+GGGRA AKG+ RMNV+VEGS +NVS     +GILN SSF K  GR+RLIH+ R+R
Sbjct: 128 GERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRVRLIHIFRRR 187

Query: 181 IWSEISCSINLDLNTHQI 186
           + SEISCS+NLDLNTHQI
Sbjct: 188 VSSEISCSMNLDLNTHQI 202

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BLAST of Cp4.1LG05g03220 vs. TrEMBL
Match: A0A0A0KMH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152140 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGL 288
           V VRNPN ASFKYSKA+  IYYH +VIGEGETP GE KAKDT+ MNVTVEI+  +MD+  
Sbjct: 96  VSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDAS 155

Query: 289 SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDCDQ 346
           SL++D  SG L+ISSYTEIPGRVKI+G IKK + VK+ CS TYN+K++TI+ +DCDQ
Sbjct: 156 SLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQ 212

[Close]

BLAST of Cp4.1LG05g03220 vs. TrEMBL
Match: W9SZD3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006690 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24
Identity = 81/184 (44.02%), Postives = 115/184 (62.50%), Query Frame = 1


Query: 11  KTLKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSS 70
           K L+ E +NKCF+Y+F+  V L   LLIF+LIVLR  SP I L S++V+  S+  + S  
Sbjct: 28  KALRKERTNKCFVYIFAGIVILGAILLIFALIVLRSKSPEIKLKSVTVK--SLDYSTSPW 87

Query: 71  SSLNLTLIAEFSVDNSNFGPFIF-DYVTVVFMYGGVIVGERSSGGGRAEAKGTTRMNVSV 130
            SLN TLIA  ++ N NFGP+ F    + VF+YGG  +GE+    G+A AK T R+NV+V
Sbjct: 88  PSLNATLIATVAIKNPNFGPYRFGSNNSAVFLYGGGKLGEQRIRQGKATAKATKRVNVTV 147

Query: 131 E--------GSVENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKRIWSEISCSINLDLN 186
           E        GS  N+  DL+ SG++N+SS+ KF GR+ LI +   R  +E++C++ L L 
Sbjct: 148 EIRTSRLPQGS-NNLGGDLS-SGMVNLSSYCKFTGRVHLIKIFENRKTAEMNCAMTLVLK 207

[Close]

BLAST of Cp4.1LG05g03220 vs. TrEMBL
Match: M5WYG1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022176mg PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 72/201 (35.82%), Postives = 122/201 (60.70%), Query Frame = 1


Query: 1   FPLPHSQAHHKT---------LKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSPTI 60
           +PL  S+ H ++         ++ E SNKCF+Y+F+A V   + +L+F+L+VLRV SP  
Sbjct: 9   WPLAPSRLHRRSDEENPTFRAIRRERSNKCFVYVFAAIVLQSIFILVFALVVLRVKSPGF 68

Query: 61  DLSSISVRKFSISNTNSSSSSLNLTLIAEFSVDNSNFGPFIFDYVTVVFMYGGVIVGERS 120
           +LSS+SV+  S+ +T S +SSLN TL+ E ++ N NFG + F+  +    YGG  VGE  
Sbjct: 69  NLSSVSVK--SLKHTTSPTSSLNATLVTELAIKNKNFGEYKFEGSSASLWYGGFKVGEAK 128

Query: 121 SGGGRAEAKGTTRMNVSVEGSVENVSSDL-NG------SGILNMSSFAKFGGRIRLIHVL 180
            G GR +A+GT R+++S++     +  +  NG      SG L +SS+AK  G++ L+ ++
Sbjct: 129 IGKGRVKARGTRRVSLSIDVRSNRLPQEAKNGFEGEMNSGYLKISSYAKLTGKVNLMKIM 188

Query: 181 RKRIWSEISCSINLDLNTHQI 186
           +KR   + +C++ + L +  +
Sbjct: 189 KKRKTIDTNCTMVVVLKSRTV 207

[Close]

BLAST of Cp4.1LG05g03220 vs. TrEMBL
Match: A5CBV1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02080 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.6e-23
Identity = 55/115 (47.83%), Postives = 79/115 (68.70%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGL 288
           V V+NPNFASF+Y   TT ++Y G VIGE   P G+AKA+ TM MNVT+EI  + +    
Sbjct: 100 VSVKNPNFASFRYKNTTTTLFYSGTVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNP 159

Query: 289 SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDC 344
           SL+ D+ SG L +++Y+ +PGRVK++  IKK   VKM CS T N  +++I+++ C
Sbjct: 160 SLLTDISSGILPMNTYSRVPGRVKMLKIIKKHVVVKMNCSVTVNITSRSIQEQKC 214

[Close]

BLAST of Cp4.1LG05g03220 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-20
Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEM--DE 288
           V V+NPN ASFKYS  TT IYY G ++GE     G+A+   T  MNVTV+I  + +  D 
Sbjct: 100 VSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLDRILSDP 159

Query: 289 GLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDC 344
           GL   E  +SG +N+ SYT + G+VKI+G +KK   VKM C+   N   Q I+  DC
Sbjct: 160 GLG-REISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

[Close]

BLAST of Cp4.1LG05g03220 vs. TAIR10
Match: AT1G64065.1 (AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 1


Query: 16  EPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNL 75
           EP  KC +Y  +  V +    LI S I LR++ P I+  SIS R    S  NS++   N 
Sbjct: 34  EPPGKCLVYSLTIIVIIFALCLILSSIFLRISKPEIETRSISTRDLR-SGGNSTNPYFNA 93

Query: 76  TLIAEFSVDNSNFGPFIFDYVTVVFMYGG-VIVGERSSGGGRAEAKGTTRM-NVSVE-GS 135
           TL+++ S+ NSNFG F F+  T+  +Y    +VGE    G R EA  T R+  V VE GS
Sbjct: 94  TLVSDISIRNSNFGAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGS 153

Query: 136 -----VENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKRIW--SEISCSINLDL 181
                 +++  DL   G L + S A+  GRI+   VL ++ W  S +SC++ L+L
Sbjct: 154 FRLLDTKDLDKDLR-LGFLELRSVAEVRGRIK---VLGRKRWKVSVMSCTMRLNL 203

[Close]

BLAST of Cp4.1LG05g03220 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 28/126 (22.22%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 218 KLRLHRNKYIIVFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTV 277
           K+ L+    + + ++NPN   F Y  ++ ++ Y G+VIGE   P     A+ T+ +N+T+
Sbjct: 104 KVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITL 163

Query: 278 EIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQT 337
            + A+ +     L+ D+ +G + ++++ ++ G+V ++   K K      C  + +   + 
Sbjct: 164 TLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRN 223

Query: 338 IEKEDC 344
           +  + C
Sbjct: 224 VTSQHC 229

[Close]

BLAST of Cp4.1LG05g03220 vs. TAIR10
Match: AT4G23610.1 (AT4G23610.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGE--VIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDE 288
           + + NPN A F   K   V +YHGE  V+GE         AK T+ MN+T EI   ++  
Sbjct: 111 ISLHNPNPALF-IVKNVNVSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLA 170

Query: 289 GL-SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMEC 328
            L  LMEDL   G+++ S  E+ GRVK +   +K   ++ +C
Sbjct: 171 SLPGLMEDLNGRGVDLKSSVEVRGRVKKMKIFRKTVHLQTDC 211

[Close]

BLAST of Cp4.1LG05g03220 vs. TAIR10
Match: AT4G13270.1 (AT4G13270.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 52.0 bits (123), Expect = 8.6e-07
Identity = 36/141 (25.53%), Postives = 64/141 (45.39%), Query Frame = 1


Query: 204 HLRSDDDHFLPPPAKLRLHRNKYIIVFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGG 263
           H+   D H      K+ L  +  + + VRN +F S  Y      I Y G  +G  ++ GG
Sbjct: 79  HISVVDSH------KIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGLVKSKGG 138

Query: 264 EAKAKDTMTMNVTVEIKA-EEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFA 323
             KA+D+  ++ T+E+   E + + + L+ DL  G +   +  ++ G + ++ F      
Sbjct: 139 HLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVLLF-NIPIQ 198

Query: 324 VKMECSFTYNAKTQTIEKEDC 344
            K+ C    N   Q I  +DC
Sbjct: 199 GKVSCEVYVNVNNQKISHQDC 212

[Close]

BLAST of Cp4.1LG05g03220 vs. NCBI nr
Match: gi|659073967|ref|XP_008437349.1| (PREDICTED: uncharacterized protein LOC103482793 [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 6.5e-57
Identity = 130/198 (65.66%), Postives = 155/198 (78.28%), Query Frame = 1


Query: 1   FPLPHSQAHHKT-----------LKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSP 60
           FPL H QAHHKT           L  E SNKCFIY+FS FVFL VALLIF+LIVLRVNSP
Sbjct: 8   FPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALIVLRVNSP 67

Query: 61  TIDLSSISVRKFSISNTNSSSS--SLNLTLIAEFSVDNSNFGPFIFDYVTVVFMYGGVIV 120
           +I+LS++S+ KFS+SN N+SSS  SL+L+  A F+VDNSNFGPF FD  TV  +YGG+I 
Sbjct: 68  SINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGLVYGGMIF 127

Query: 121 GERSSGGGRAEAKGTTRMNVSVEGSVENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKR 180
           GERS+GGGRAEAKG+ RMNV+VEGS +NVS     +GIL++SSF K  GR+RLIHV R+R
Sbjct: 128 GERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRVRLIHVFRRR 187

Query: 181 IWSEISCSINLDLNTHQI 186
           + SEISCS+NLDLNTHQI
Sbjct: 188 VSSEISCSMNLDLNTHQI 202

[Close]

BLAST of Cp4.1LG05g03220 vs. NCBI nr
Match: gi|449452438|ref|XP_004143966.1| (PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 4.7e-55
Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 1


Query: 1   FPLPHSQAHHKT-----------LKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSP 60
           FPL H QAHHK            L+ E SNKCFIY+FS FVFL VALLIF+LIVLRVNSP
Sbjct: 8   FPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALIVLRVNSP 67

Query: 61  TIDLSSISVRKFSISNTNSSSS--SLNLTLIAEFSVDNSNFGPFIFDYVTVVFMYGGVIV 120
           +I LSSIS  + S+SN  +SSS  SLNL+  AEF+VDNSNFGPF FD  TV  +YGG+I 
Sbjct: 68  SISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGLVYGGMIF 127

Query: 121 GERSSGGGRAEAKGTTRMNVSVEGSVENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKR 180
           GERS+GGGRA AKG+ RMNV+VEGS +NVS     +GILN SSF K  GR+RLIH+ R+R
Sbjct: 128 GERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRVRLIHIFRRR 187

Query: 181 IWSEISCSINLDLNTHQI 186
           + SEISCS+NLDLNTHQI
Sbjct: 188 VSSEISCSMNLDLNTHQI 202

[Close]

BLAST of Cp4.1LG05g03220 vs. NCBI nr
Match: gi|659073969|ref|XP_008437350.1| (PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 1.3e-36
Identity = 77/117 (65.81%), Postives = 98/117 (83.76%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGL 288
           V VRNPN ASFKYSKA+T IYYH +VIGEGETP GE KAKDT+ MNVTV+I+  ++D+  
Sbjct: 95  VSVRNPNVASFKYSKASTKIYYHNKVIGEGETPPGEVKAKDTLKMNVTVKIEPWKIDDAS 154

Query: 289 SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDCDQ 346
           SL++D  SG L+ISSYTEIPGRVK++G IKK + VK+ CS TYN+K++TI+++DCDQ
Sbjct: 155 SLIKDWNSGALSISSYTEIPGRVKLLGAIKKNYLVKISCSLTYNSKSKTIQRQDCDQ 211

[Close]

BLAST of Cp4.1LG05g03220 vs. NCBI nr
Match: gi|778708243|ref|XP_004143964.2| (PREDICTED: uncharacterized protein LOC101212153 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGL 288
           V VRNPN ASFKYSKA+  IYYH +VIGEGETP GE KAKDT+ MNVTVEI+  +MD+  
Sbjct: 328 VSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDAS 387

Query: 289 SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDCDQ 346
           SL++D  SG L+ISSYTEIPGRVKI+G IKK + VK+ CS TYN+K++TI+ +DCDQ
Sbjct: 388 SLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQ 444

[Close]

BLAST of Cp4.1LG05g03220 vs. NCBI nr
Match: gi|700194872|gb|KGN50049.1| (hypothetical protein Csa_5G152140 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1


Query: 229 VFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGL 288
           V VRNPN ASFKYSKA+  IYYH +VIGEGETP GE KAKDT+ MNVTVEI+  +MD+  
Sbjct: 96  VSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDAS 155

Query: 289 SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDCDQ 346
           SL++D  SG L+ISSYTEIPGRVKI+G IKK + VK+ CS TYN+K++TI+ +DCDQ
Sbjct: 156 SLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQ 212

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g03220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1465_ARATH	2.4e-11	37.14	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g640...	[more]

BLAST of Cp4.1LG05g03220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQT7_CUCSA	3.3e-55	65.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152160 PE=4 SV=1	[more]
A0A0A0KMH1_CUCSA	1.2e-36	67.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152140 PE=4 SV=1	[more]
W9SZD3_9ROSA	1.7e-24	44.02	Uncharacterized protein OS=Morus notabilis GN=L484_006690 PE=4 SV=1	[more]
M5WYG1_PRUPE	1.1e-23	35.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022176mg PE=4 SV=1	[more]
A5CBV1_VITVI	5.6e-23	47.83	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02080 PE=4 SV=...	[more]

BLAST of Cp4.1LG05g03220 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46150.1	1.8e-20	46.15	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G64065.1	1.4e-12	37.14	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT3G54200.1	2.0e-11	22.22	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G23610.1	1.0e-07	36.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G13270.1	8.6e-07	25.53	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Cp4.1LG05g03220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073967\|ref\|XP_008437349.1\|	6.5e-57	65.66	PREDICTED: uncharacterized protein LOC103482793 [Cucumis melo]	[more]
gi\|449452438\|ref\|XP_004143966.1\|	4.7e-55	65.15	PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus]	[more]
gi\|659073969\|ref\|XP_008437350.1\|	1.3e-36	65.81	PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo]	[more]
gi\|778708243\|ref\|XP_004143964.2\|	1.7e-36	67.52	PREDICTED: uncharacterized protein LOC101212153 [Cucumis sativus]	[more]
gi\|700194872\|gb\|KGN50049.1\|	1.7e-36	67.52	hypothetical protein Csa_5G152140 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g03220.1	Cp4.1LG05g03220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 81..174 score: 6.3E-8coord: 231..328 score: 2.9
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 229..345 score: 7.6
None	No IPR available	PANTHER	PTHR31852:SF6	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 229..345 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g03220	Cucsa.303580	Cucumber (Gy14) v1	cgycpeB0792
Cp4.1LG05g03220	CmaCh15G012560	Cucurbita maxima (Rimu)	cmacpeB329
Cp4.1LG05g03220	CmaCh02G014190	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g03220	CmoCh02G014510	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g03220	CmoCh15G013220	Cucurbita moschata (Rifu)	cmocpeB292
Cp4.1LG05g03220	Cla011406	Watermelon (97103) v1	cpewmB717
Cp4.1LG05g03220	Csa5G152140	Cucumber (Chinese Long) v2	cpecuB736
Cp4.1LG05g03220	MELO3C005720	Melon (DHL92) v3.5.1	cpemeB647
Cp4.1LG05g03220	ClCG01G002260	Watermelon (Charleston Gray)	cpewcgB639
Cp4.1LG05g03220	CSPI05G04930	Wild cucumber (PI 183967)	cpecpiB738
Cp4.1LG05g03220	Lsi09G002080	Bottle gourd (USVL1VR-Ls)	cpelsiB582
Cp4.1LG05g03220	MELO3C005720.2	Melon (DHL92) v3.6.1	cpemedB774
Cp4.1LG05g03220	CsaV3_5G002330	Cucumber (Chinese Long) v3	cpecucB0915
Cp4.1LG05g03220	Bhi12G000163	Wax gourd	cpewgoB0917
Cp4.1LG05g03220	CsGy5G002240	Cucumber (Gy14) v2	cgybcpeB691
Cp4.1LG05g03220	Carg02559	Silver-seed gourd	carcpeB1282

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g03220	Cucurbita pepo (Zucchini)	cpecpeB226
Cp4.1LG05g03220	Watermelon (Charleston Gray)	cpewcgB680
Cp4.1LG05g03220	Wax gourd	cpewgoB0961