CmoCh15G013220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G013220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Late embryogenesis abundant hydroxyproline-rich glycofamily protein, putative
Location	Cmo_Chr15 : 9082841 .. 9083479 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTTGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

mRNA sequence

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTTGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

Coding sequence (CDS)

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTTGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

Homology

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BLAST of CmoCh15G013220 vs. Swiss-Prot
Match: Y1465_ARATH (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 62/217 (28.57%), Postives = 107/217 (49.31%), Query Frame = 1


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           D     +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI + I 
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIF 62

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LR++ P +   S+S      S  NS++P  N T+ + +++ NSNFG F F+ +++  +YA
Sbjct: 63  LRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYA 122

Query: 124 G-AIVGQSTTGAGRAKA-KGTKTMNVTVHASA------KNISADYNNSRLLNLSSFANLR 183
              +VG++     R +A K  +   V V   +      K++  D      L L S A +R
Sbjct: 123 DHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLG-FLELRSVAEVR 182

Query: 184 GRVRLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           GR++++   +R   S + C+M L+L    IQ N +CE
Sbjct: 183 GRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLCE 214

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BLAST of CmoCh15G013220 vs. TrEMBL
Match: A0A0A0KQT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.9e-70
Identity = 151/214 (70.56%), Postives = 173/214 (80.84%), Query Frame = 1


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK +EEQ   L TFK L+KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQ--QLATFKILRKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLS-NTNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP++  SS+S  + SLS NTNSSSP SLNL+  A+  VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA AKG+K MNVTV  SAKN+S    ++ +LN SSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIHIFRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

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BLAST of CmoCh15G013220 vs. TrEMBL
Match: W9SZD3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006690 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.9e-31
Identity = 94/215 (43.72%), Postives = 129/215 (60.00%), Query Frame = 1


Query: 1   MAD-DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIF 60
           MAD +SQS+P+A  + H +SDEE       FKAL+KER+NKCF+Y+F+  V L   +LIF
Sbjct: 1   MADQESQSWPLAPMRVHQRSDEEN----PAFKALRKERTNKCFVYIFAGIVILGAILLIF 60

Query: 61  ALIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNF-DHASV 120
           ALIVLR  SP +   S++V   SL  + S  PSLN T+ A +A+ N NFGP+ F  + S 
Sbjct: 61  ALIVLRSKSPEIKLKSVTVK--SLDYSTSPWPSLNATLIATVAIKNPNFGPYRFGSNNSA 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNN------SRLLNLSSFA 180
            F+Y G  +G+     G+A AK TK +NVTV      +    NN      S ++NLSS+ 
Sbjct: 121 VFLYGGGKLGEQRIRQGKATAKATKRVNVTVEIRTSRLPQGSNNLGGDLSSGMVNLSSYC 180

Query: 181 NLRGRVRLIHIFRRRASSEIRCSMILDLNTHQIQH 208
              GRV LI IF  R ++E+ C+M L L T  I++
Sbjct: 181 KFTGRVHLIKIFENRKTAEMNCAMTLVLKTKMIKN 209

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BLAST of CmoCh15G013220 vs. TrEMBL
Match: M5WYG1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022176mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-30
Identity = 84/210 (40.00%), Postives = 132/210 (62.86%), Query Frame = 1


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           +SQ +P+A  + H +SDEE      TF+A+++ERSNKCF+YVF+A V  S+ +L+FAL+V
Sbjct: 5   ESQVWPLAPSRLHRRSDEEN----PTFRAIRRERSNKCFVYVFAAIVLQSIFILVFALVV 64

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LRV SP  + SS+SV   SL +T S + SLN T+  +LA+ N NFG + F+ +S    Y 
Sbjct: 65  LRVKSPGFNLSSVSVK--SLKHTTSPTSSLNATLVTELAIKNKNFGEYKFEGSSASLWYG 124

Query: 124 GAIVGQSTTGAGRAKAKGTKTMNVTVHA-------SAKNISADYNNSRLLNLSSFANLRG 183
           G  VG++  G GR KA+GT+ +++++          AKN      NS  L +SS+A L G
Sbjct: 125 GFKVGEAKIGKGRVKARGTRRVSLSIDVRSNRLPQEAKNGFEGEMNSGYLKISSYAKLTG 184

Query: 184 RVRLIHIFRRRASSEIRCSMILDLNTHQIQ 207
           +V L+ I ++R + +  C+M++ L +  ++
Sbjct: 185 KVNLMKIMKKRKTIDTNCTMVVVLKSRTVK 208

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BLAST of CmoCh15G013220 vs. TrEMBL
Match: F6HUN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00530 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-24
Identity = 80/215 (37.21%), Postives = 129/215 (60.00%), Query Frame = 1


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKE---RSNKCFIYVFSAFVFLSVAVL 60
           M +D+Q  P+A  + H KSDEE       FK    +   RS+KC +YV +  V L+   L
Sbjct: 1   MPEDNQFQPLAPARLHGKSDEE----FGVFKPRASKPPRRSSKCPVYVLAGLVTLAAIAL 60

Query: 61  IFALIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHAS 120
           +FAL VLRV +P +   S++V   +L++  S SPS N+T+TA+++V N NFG FNF++ +
Sbjct: 61  VFALAVLRVEAPDVELKSVAVK--NLTHGTSPSPSFNVTLTAEVSVQNKNFGAFNFENGT 120

Query: 121 VGFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASA------KNISADYNNSRLLNLSSF 180
              +Y G +VG         +++ TK MNVT+   +      KN+S+D  +S  +NL+++
Sbjct: 121 ATVLYEGMVVGDEEFSKAHVESRKTKRMNVTLDVRSDRLWNDKNLSSDI-SSGSVNLTTY 180

Query: 181 ANLRGRVRLIHIFRRRASSEIRCSMILDLNTHQIQ 207
           A + G+VR++ + RRR ++ + CSM L+L +  IQ
Sbjct: 181 AQVTGKVRVMKVVRRRTTARMNCSMTLNLTSSSIQ 208

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BLAST of CmoCh15G013220 vs. TrEMBL
Match: A0A061GCT5_THECC (Late embryogenesis abundant hydroxyproline-rich glycofamily protein OS=Theobroma cacao GN=TCM_016352 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.5e-22
Identity = 68/176 (38.64%), Postives = 114/176 (64.77%), Query Frame = 1


Query: 33  LKKERSN-KCFIYVFSAFVFLSVAVLIFALIVLRVNSPALHFSSLSVAKFSLSNTNSSSP 92
           +++E SN KC  YV +  VF +  +L+FAL V+R+ SP + F +++V  FS    NSSSP
Sbjct: 3   VRREGSNAKCLAYVAAFVVFQTAIILLFALTVMRIRSPKVRFGAVTVESFS--TVNSSSP 62

Query: 93  SLNLTVTAQLAVDNSNFGPFNFDHASVGFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHA 152
           S ++ + AQ+AV N+NFG F +++++V  +Y G  VG++    GRA+A+ TK  N+ V  
Sbjct: 63  SFDMKLMAQVAVKNTNFGHFKYENSTVTILYGGMPVGEAAIFKGRARARQTKKFNINVDI 122

Query: 153 SAKNISADYN-----NSRLLNLSSFANLRGRVRLIHIFRRRASSEIRCSMILDLNT 203
           S+  +S++ N     N+ +L LSS A L+G+V L+ + +++ S E+ C+M ++L T
Sbjct: 123 SSSRLSSNSNLGNDINAGVLPLSSQAKLKGKVHLMKVIKKKKSGEMSCTMGINLAT 176

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BLAST of CmoCh15G013220 vs. TAIR10
Match: AT1G64065.1 (AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10
Identity = 62/217 (28.57%), Postives = 107/217 (49.31%), Query Frame = 1


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           D     +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI + I 
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIF 62

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LR++ P +   S+S      S  NS++P  N T+ + +++ NSNFG F F+ +++  +YA
Sbjct: 63  LRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYA 122

Query: 124 G-AIVGQSTTGAGRAKA-KGTKTMNVTVHASA------KNISADYNNSRLLNLSSFANLR 183
              +VG++     R +A K  +   V V   +      K++  D      L L S A +R
Sbjct: 123 DHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLG-FLELRSVAEVR 182

Query: 184 GRVRLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           GR++++   +R   S + C+M L+L    IQ N +CE
Sbjct: 183 GRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLCE 214

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BLAST of CmoCh15G013220 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 54/214 (25.23%), Postives = 98/214 (45.79%), Query Frame = 1


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MAD     P+A       SDE       T ++  +    KC I V +  + L+  VL   
Sbjct: 1   MADSEHVRPLAPATILPVSDESASNIKNTHRSRNRI---KCSICVTATSLILTTIVLTLV 60

Query: 61  LIVLRVNSPALHFSSLSVAKF-SLSNTNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
             V RV  P +  + + V    S++ TN       N+++   ++V N N   F + + + 
Sbjct: 61  FTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTT 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISAD------YNNSRLLNLSSFA 180
              Y G +VG++    G+A+   T  MNVTV      I +D       + S L+N+ S+ 
Sbjct: 121 DIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYT 180

Query: 181 NLRGRVRLIHIFRRRASSEIRCSMILDLNTHQIQ 207
            + G+V+++ I ++  + ++ C+M +++    IQ
Sbjct: 181 RVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQ 211

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BLAST of CmoCh15G013220 vs. NCBI nr
Match: gi|659073967|ref|XP_008437349.1| (PREDICTED: uncharacterized protein LOC103482793 [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70
Identity = 150/214 (70.09%), Postives = 177/214 (82.71%), Query Frame = 1


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV  SAKN+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

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BLAST of CmoCh15G013220 vs. NCBI nr
Match: gi|449452438|ref|XP_004143966.1| (PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 7.0e-70
Identity = 151/214 (70.56%), Postives = 173/214 (80.84%), Query Frame = 1


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK +EEQ   L TFK L+KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQ--QLATFKILRKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLS-NTNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP++  SS+S  + SLS NTNSSSP SLNL+  A+  VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA AKG+K MNVTV  SAKN+S    ++ +LN SSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIHIFRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: gi|703160743|ref|XP_010112610.1| (hypothetical protein L484_006690 [Morus notabilis])

HSP 1 Score: 142.5 bits (358), Expect = 8.4e-31
Identity = 94/215 (43.72%), Postives = 129/215 (60.00%), Query Frame = 1


Query: 1   MAD-DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIF 60
           MAD +SQS+P+A  + H +SDEE       FKAL+KER+NKCF+Y+F+  V L   +LIF
Sbjct: 1   MADQESQSWPLAPMRVHQRSDEEN----PAFKALRKERTNKCFVYIFAGIVILGAILLIF 60

Query: 61  ALIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNF-DHASV 120
           ALIVLR  SP +   S++V   SL  + S  PSLN T+ A +A+ N NFGP+ F  + S 
Sbjct: 61  ALIVLRSKSPEIKLKSVTVK--SLDYSTSPWPSLNATLIATVAIKNPNFGPYRFGSNNSA 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNN------SRLLNLSSFA 180
            F+Y G  +G+     G+A AK TK +NVTV      +    NN      S ++NLSS+ 
Sbjct: 121 VFLYGGGKLGEQRIRQGKATAKATKRVNVTVEIRTSRLPQGSNNLGGDLSSGMVNLSSYC 180

Query: 181 NLRGRVRLIHIFRRRASSEIRCSMILDLNTHQIQH 208
              GRV LI IF  R ++E+ C+M L L T  I++
Sbjct: 181 KFTGRVHLIKIFENRKTAEMNCAMTLVLKTKMIKN 209

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: gi|595858017|ref|XP_007210661.1| (hypothetical protein PRUPE_ppa022176mg [Prunus persica])

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30
Identity = 84/210 (40.00%), Postives = 132/210 (62.86%), Query Frame = 1


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           +SQ +P+A  + H +SDEE      TF+A+++ERSNKCF+YVF+A V  S+ +L+FAL+V
Sbjct: 5   ESQVWPLAPSRLHRRSDEEN----PTFRAIRRERSNKCFVYVFAAIVLQSIFILVFALVV 64

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LRV SP  + SS+SV   SL +T S + SLN T+  +LA+ N NFG + F+ +S    Y 
Sbjct: 65  LRVKSPGFNLSSVSVK--SLKHTTSPTSSLNATLVTELAIKNKNFGEYKFEGSSASLWYG 124

Query: 124 GAIVGQSTTGAGRAKAKGTKTMNVTVHA-------SAKNISADYNNSRLLNLSSFANLRG 183
           G  VG++  G GR KA+GT+ +++++          AKN      NS  L +SS+A L G
Sbjct: 125 GFKVGEAKIGKGRVKARGTRRVSLSIDVRSNRLPQEAKNGFEGEMNSGYLKISSYAKLTG 184

Query: 184 RVRLIHIFRRRASSEIRCSMILDLNTHQIQ 207
           +V L+ I ++R + +  C+M++ L +  ++
Sbjct: 185 KVNLMKIMKKRKTIDTNCTMVVVLKSRTVK 208

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BLAST of CmoCh15G013220 vs. NCBI nr
Match: gi|645267309|ref|XP_008239012.1| (PREDICTED: uncharacterized protein LOC103337622 [Prunus mume])

HSP 1 Score: 139.8 bits (351), Expect = 5.5e-30
Identity = 84/210 (40.00%), Postives = 131/210 (62.38%), Query Frame = 1


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           +SQ +P+A  + H +SDEE      TFKA+++ERSNKCF+YVFSA V  S+ +L+FAL+V
Sbjct: 5   ESQVWPLAPSRLHRRSDEEN----PTFKAIRRERSNKCFVYVFSAIVLQSILILVFALVV 64

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LRV SP  + SS+ V   +L +T S + SLN T+  +LA+ N NFG + F+ +S    Y 
Sbjct: 65  LRVKSPGFNLSSVVVK--NLKHTTSPTSSLNATLVTELAIKNKNFGEYKFEGSSASLWYG 124

Query: 124 GAIVGQSTTGAGRAKAKGTKTMNVTVHA-------SAKNISADYNNSRLLNLSSFANLRG 183
           G  VG++  G GR KA+GT+ +++++          AKN      NS  L +SS+A L G
Sbjct: 125 GFKVGEAKIGKGRVKARGTRRVSLSIEVRSNRLPQEAKNGFEGEINSGYLKISSYAKLSG 184

Query: 184 RVRLIHIFRRRASSEIRCSMILDLNTHQIQ 207
           +V L+ I ++R + +  C+M++ L +  ++
Sbjct: 185 KVNLMKIMKKRKTIDTNCTMVVVLKSRTVK 208

The following BLAST results are available for this feature:

BLAST of CmoCh15G013220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1465_ARATH	1.5e-08	28.57	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g640...	[more]

BLAST of CmoCh15G013220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQT7_CUCSA	4.9e-70	70.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152160 PE=4 SV=1	[more]
W9SZD3_9ROSA	5.9e-31	43.72	Uncharacterized protein OS=Morus notabilis GN=L484_006690 PE=4 SV=1	[more]
M5WYG1_PRUPE	2.2e-30	40.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022176mg PE=4 SV=1	[more]
F6HUN8_VITVI	3.1e-24	37.21	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00530 PE=4 SV=...	[more]
A0A061GCT5_THECC	8.5e-22	38.64	Late embryogenesis abundant hydroxyproline-rich glycofamily protein OS=Theobroma...	[more]

BLAST of CmoCh15G013220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64065.1	8.7e-10	28.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G46150.1	1.1e-07	25.23	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CmoCh15G013220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073967\|ref\|XP_008437349.1\|	1.1e-70	70.09	PREDICTED: uncharacterized protein LOC103482793 [Cucumis melo]	[more]
gi\|449452438\|ref\|XP_004143966.1\|	7.0e-70	70.56	PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus]	[more]
gi\|703160743\|ref\|XP_010112610.1\|	8.4e-31	43.72	hypothetical protein L484_006690 [Morus notabilis]	[more]
gi\|595858017\|ref\|XP_007210661.1\|	3.2e-30	40.00	hypothetical protein PRUPE_ppa022176mg [Prunus persica]	[more]
gi\|645267309\|ref\|XP_008239012.1\|	5.5e-30	40.00	PREDICTED: uncharacterized protein LOC103337622 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G013220.1	CmoCh15G013220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 101..194 score: 3.
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 4..212 score: 8.1
None	No IPR available	PANTHER	PTHR31852:SF19	SUBFAMILY NOT NAMED	coord: 4..212 score: 8.1
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 51..156 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G013220	Cucsa.303580	Cucumber (Gy14) v1	cgycmoB0824
CmoCh15G013220	CmaCh15G012560	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G013220	CmaCh02G014190	Cucurbita maxima (Rimu)	cmacmoB583
CmoCh15G013220	Cla011407	Watermelon (97103) v1	cmowmB267
CmoCh15G013220	Csa5G152160	Cucumber (Chinese Long) v2	cmocuB286
CmoCh15G013220	MELO3C005720	Melon (DHL92) v3.5.1	cmomeB238
CmoCh15G013220	ClCG01G002270	Watermelon (Charleston Gray)	cmowcgB247
CmoCh15G013220	Lsi09G002100	Bottle gourd (USVL1VR-Ls)	cmolsiB255
CmoCh15G013220	Lsi09G015980	Bottle gourd (USVL1VR-Ls)	cmolsiB254
CmoCh15G013220	Cp4.1LG05g03220	Cucurbita pepo (Zucchini)	cmocpeB292
CmoCh15G013220	MELO3C005720.2	Melon (DHL92) v3.6.1	cmomedB270
CmoCh15G013220	MELO3C021179.2	Melon (DHL92) v3.6.1	cmomedB291
CmoCh15G013220	CsaV3_5G002330	Cucumber (Chinese Long) v3	cmocucB0347
CmoCh15G013220	Cla97C06G112770	Watermelon (97103) v2	cmowmbB295
CmoCh15G013220	Bhi12G000163	Wax gourd	cmowgoB0368
CmoCh15G013220	CsGy6G000890	Cucumber (Gy14) v2	cgybcmoB726
CmoCh15G013220	CsGy5G002260	Cucumber (Gy14) v2	cgybcmoB583
CmoCh15G013220	Carg16609	Silver-seed gourd	carcmoB1252
CmoCh15G013220	Carg02559	Silver-seed gourd	carcmoB1230

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G013220	CmoCh17G004350	Cucurbita moschata (Rifu)	cmocmoB240
CmoCh15G013220	CmoCh02G014520	Cucurbita moschata (Rifu)	cmocmoB250

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G013220	Cucumber (Gy14) v2	cgybcmoB299
CmoCh15G013220	Cucumber (Gy14) v2	cgybcmoB460
CmoCh15G013220	Melon (DHL92) v3.6.1	cmomedB309
CmoCh15G013220	Silver-seed gourd	carcmoB0802
CmoCh15G013220	Cucumber (Chinese Long) v3	cmocucB0330
CmoCh15G013220	Cucumber (Chinese Long) v3	cmocucB0332
CmoCh15G013220	Cucumber (Chinese Long) v3	cmocucB0363
CmoCh15G013220	Watermelon (97103) v2	cmowmbB291
CmoCh15G013220	Watermelon (97103) v2	cmowmbB270
CmoCh15G013220	Cucurbita moschata (Rifu)	cmocmoB238
CmoCh15G013220	Cucurbita moschata (Rifu)	cmocmoB264
CmoCh15G013220	Cucurbita moschata (Rifu)	cmocmoB273
CmoCh15G013220	Cucumber (Gy14) v1	cgycmoB0243
CmoCh15G013220	Cucumber (Gy14) v1	cgycmoB0367
CmoCh15G013220	Cucumber (Gy14) v1	cgycmoB0701
CmoCh15G013220	Cucurbita maxima (Rimu)	cmacmoB320
CmoCh15G013220	Cucurbita maxima (Rimu)	cmacmoB697
CmoCh15G013220	Wild cucumber (PI 183967)	cmocpiB282
CmoCh15G013220	Wild cucumber (PI 183967)	cmocpiB285
CmoCh15G013220	Wild cucumber (PI 183967)	cmocpiB295
CmoCh15G013220	Wild cucumber (PI 183967)	cmocpiB310
CmoCh15G013220	Cucumber (Chinese Long) v2	cmocuB275
CmoCh15G013220	Cucumber (Chinese Long) v2	cmocuB277
CmoCh15G013220	Cucumber (Chinese Long) v2	cmocuB301
CmoCh15G013220	Melon (DHL92) v3.5.1	cmomeB255
CmoCh15G013220	Melon (DHL92) v3.5.1	cmomeB271
CmoCh15G013220	Melon (DHL92) v3.5.1	cmomeB274
CmoCh15G013220	Watermelon (Charleston Gray)	cmowcgB257
CmoCh15G013220	Watermelon (Charleston Gray)	cmowcgB259
CmoCh15G013220	Watermelon (97103) v1	cmowmB261
CmoCh15G013220	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G013220	Cucurbita pepo (Zucchini)	cmocpeB287
CmoCh15G013220	Bottle gourd (USVL1VR-Ls)	cmolsiB276