CsGy5G002260 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G002260
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	late embryogenesis abundant protein At1g64065
Location	Chr5 : 1414986 .. 1415615 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAGACAGCCAGAGCTTTCCATTAGCCCACTACCAAGCTCACCACAAACCCAACGAAGAACAACAACTCGCTACCTTCAAAATTCTCCGTAAAGAACGATCCAACAAATGCTTCATCTACATCTTCTCCACTTTCGTCTTCCTCAGCGTTGCTCTTCTAATCTTCGCTCTCATCGTCCTCCGTGTCAATTCCCCTTCCATCAGCCTCTCTTCCATTTCAAACCCTAAAGTCTCCCTCTCTAACAACGCTAATTCCTCTTCTCCTAATTCTCTTAATCTCTCCTTCAACGCTGAATTCACCGTCGATAATTCCAACTTCGGTCCTTTCAATTTCGACAACGGCACCGTCGGTCTTGTGTATGGTGGAATGATCTTCGGGGAGAGAAGTACTGGGGGTGGGAGAGCTGGGGCTAAAGGGAGTAAGAGGATGAATGTTACCGTGGAAGGTTCGGCGAAGAATGTTAGTGGTAGTAATGGGATTTTGAATTTTAGTAGCTTTGTGAAATTGAGAGGGAGAGTTCGTTTGATTCATATTTTTAGACGGAGGGTTTCGTCGGAGATTAGTTGTTCGATGAATCTGGATTTGAATACTCATCAAATTCAACATAATTGGGTTTGTGAGTAG

mRNA sequence

ATGGGAGAAGACAGCCAGAGCTTTCCATTAGCCCACTACCAAGCTCACCACAAACCCAACGAAGAACAACAACTCGCTACCTTCAAAATTCTCCGTAAAGAACGATCCAACAAATGCTTCATCTACATCTTCTCCACTTTCGTCTTCCTCAGCGTTGCTCTTCTAATCTTCGCTCTCATCGTCCTCCGTGTCAATTCCCCTTCCATCAGCCTCTCTTCCATTTCAAACCCTAAAGTCTCCCTCTCTAACAACGCTAATTCCTCTTCTCCTAATTCTCTTAATCTCTCCTTCAACGCTGAATTCACCGTCGATAATTCCAACTTCGGTCCTTTCAATTTCGACAACGGCACCGTCGGTCTTGTGTATGGTGGAATGATCTTCGGGGAGAGAAGTACTGGGGGTGGGAGAGCTGGGGCTAAAGGGAGTAAGAGGATGAATGTTACCGTGGAAGGTTCGGCGAAGAATGTTAGTGGTAGTAATGGGATTTTGAATTTTAGTAGCTTTGTGAAATTGAGAGGGAGAGTTCGTTTGATTCATATTTTTAGACGGAGGGTTTCGTCGGAGATTAGTTGTTCGATGAATCTGGATTTGAATACTCATCAAATTCAACATAATTGGGTTTGTGAGTAG

Coding sequence (CDS)

ATGGGAGAAGACAGCCAGAGCTTTCCATTAGCCCACTACCAAGCTCACCACAAACCCAACGAAGAACAACAACTCGCTACCTTCAAAATTCTCCGTAAAGAACGATCCAACAAATGCTTCATCTACATCTTCTCCACTTTCGTCTTCCTCAGCGTTGCTCTTCTAATCTTCGCTCTCATCGTCCTCCGTGTCAATTCCCCTTCCATCAGCCTCTCTTCCATTTCAAACCCTAAAGTCTCCCTCTCTAACAACGCTAATTCCTCTTCTCCTAATTCTCTTAATCTCTCCTTCAACGCTGAATTCACCGTCGATAATTCCAACTTCGGTCCTTTCAATTTCGACAACGGCACCGTCGGTCTTGTGTATGGTGGAATGATCTTCGGGGAGAGAAGTACTGGGGGTGGGAGAGCTGGGGCTAAAGGGAGTAAGAGGATGAATGTTACCGTGGAAGGTTCGGCGAAGAATGTTAGTGGTAGTAATGGGATTTTGAATTTTAGTAGCTTTGTGAAATTGAGAGGGAGAGTTCGTTTGATTCATATTTTTAGACGGAGGGTTTCGTCGGAGATTAGTTGTTCGATGAATCTGGATTTGAATACTCATCAAATTCAACATAATTGGGTTTGTGAGTAG

Protein sequence

MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALIVLRVNSPSISLSSISNPKVSLSNNANSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE

Homology

[Close]

BLAST of CsGy5G002260 vs. NCBI nr
Match: XP_004143966.1 (PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus] >KGN50051.1 hypothetical protein Csa_5G152160 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
           VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVGL
Sbjct: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180
           VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CsGy5G002260 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 3.7e-59
Identity = 148/209 (70.81%), Postives = 151/209 (72.25%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHK +EEQQLATFK L KERSNKCFIYIFSTFVFL          
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLXXXXXXXXXX 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
                      XXXXXXXXXXXXX                                TVGL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXNNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180
           VYGGMIFGERSTGGGRA AKGSKRMNVTVEGSAKNVSGSNGIL+ SSFVKLRGRVRLIH+
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CsGy5G002260 vs. NCBI nr
Match: XP_022969774.1 (uncharacterized protein LOC111468875 [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 5.3e-50
Identity = 132/214 (61.68%), Postives = 151/214 (70.56%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQ--LATFKILRKERSNKCFIYIFSTFVFLSVALLIFA 60
           M +DSQSFP+AHY+AHHK +EEQ+  L TFK L+KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 120
           LIVLRVNSP  +L             XXXXXXXXXXX                     +V
Sbjct: 61  LIVLRVNSP--ALHFSSLSVAKFSLSXXXXXXXXXXXTVTAQLAVDNSNFGPFNFDYASV 120

Query: 121 GLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRV 180
           G +Y G I G+ +TG GRA AKG+K MNVTV+ SA N+S    ++ +LN SSF  LRGRV
Sbjct: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180

Query: 181 RLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           RLIHIFRRR SSEISCSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of CsGy5G002260 vs. NCBI nr
Match: XP_022958536.1 (uncharacterized protein LOC111459739 [Cucurbita moschata])

HSP 1 Score: 174.9 bits (442), Expect = 2.9e-40
Identity = 123/212 (58.02%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGE S SFPL H QAHHK             + E SNKCFIYIFS+FVFL VALLIF+LI
Sbjct: 1   MGEHSHSFPLPHSQAHHKTP-----------KNEPSNKCFIYIFSSFVFLCVALLIFSLI 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
           VLRVNSP+I L            XXXXXXXXXXXXXX                   TV  
Sbjct: 61  VLRVNSPTIDL--SSISVRKFSIXXXXXXXXXXXXXXIAEFSLDNSNFGPFIFDYVTVVF 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRVRL 180
           +YGG+I GERSTGGGRA AKG+ RMNV+VE S +NVS     +GILN SSF K  GR+ L
Sbjct: 121 MYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHL 180

Query: 181 IHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           IH+ R+R+ SEISCS+NLDLNTHQIQ  WVC+
Sbjct: 181 IHVLRKRIWSEISCSINLDLNTHQIQPRWVCD 199

[Close]

BLAST of CsGy5G002260 vs. NCBI nr
Match: XP_023532981.1 (uncharacterized protein LOC111794996 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 6.5e-40
Identity = 122/212 (57.55%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           M E + SFPL H QAHH           K L+ E SNKCFIY+FS FVFL VALLIF+LI
Sbjct: 1   MDEHTHSFPLPHSQAHH-----------KTLKNEPSNKCFIYLFSAFVFLCVALLIFSLI 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
           VLRVNSP+I L            XXXXXXXXXXXXXX                   TV  
Sbjct: 61  VLRVNSPTIDL--SSISVRKFSIXXXXXXXXXXXXXXIAEFSVDNSNFGPFIFDYVTVVF 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRVRL 180
           +YGG+I GERS+GGGRA AKG+ RMNV+VEGS +NVS     +GILN SSF K  GR+RL
Sbjct: 121 MYGGVIVGERSSGGGRAEAKGTTRMNVSVEGSVENVSSDLNGSGILNMSSFAKFGGRIRL 180

Query: 181 IHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           IH+ R+R+ SEISCS+NLDLNTHQI   WVCE
Sbjct: 181 IHVLRKRIWSEISCSINLDLNTHQILPRWVCE 199

[Close]

BLAST of CsGy5G002260 vs. TrEMBL
Match: tr|A0A0A0KQT7|A0A0A0KQT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.0e-77
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
           VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVGL
Sbjct: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180
           VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CsGy5G002260 vs. TrEMBL
Match: tr|A0A1S3ATY3|A0A1S3ATY3_CUCME (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-59
Identity = 148/209 (70.81%), Postives = 151/209 (72.25%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHK +EEQQLATFK L KERSNKCFIYIFSTFVFL          
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLXXXXXXXXXX 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
                      XXXXXXXXXXXXX                                TVGL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXNNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180
           VYGGMIFGERSTGGGRA AKGSKRMNVTVEGSAKNVSGSNGIL+ SSFVKLRGRVRLIH+
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CsGy5G002260 vs. TrEMBL
Match: tr|A0A2P5FIX5|A0A2P5FIX5_9ROSA (Immunoglobulin-like fold containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_063300 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.3e-22
Identity = 80/218 (36.70%), Postives = 115/218 (52.75%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           M E+SQS+PLA  + H + +EE    TFK +RKER+NKCFIY+FS  V LS+ LL+FALI
Sbjct: 1   MAEESQSWPLAPSRIHRRSDEEN--PTFKAIRKERANKCFIYVFSAIVVLSILLLVFALI 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
           VLR  SP++ L                                             +   
Sbjct: 61  VLRPKSPAVKL----RSISVKSLRYATSPWPDINATLVAEVSIENPNFGPYRFENSSARF 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVE-GSAKNVSGSN--------GILNFSSFVKL 180
           +YGG   GER  G GR GAKG+ R+++T+E  S++   G+N        G+   SS+ ++
Sbjct: 121 LYGGQKIGERRFGKGRVGAKGTGRLSLTMEVRSSRLPEGANELSSDLNSGVFKMSSYARI 180

Query: 181 RGRVRLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
            G+VRLI I + R +SE+ C+M L L T +I+ +W C+
Sbjct: 181 SGKVRLIKIIQTRKTSEMRCNMTLVLKTKKIR-DWRCD 211

[Close]

BLAST of CsGy5G002260 vs. TrEMBL
Match: tr|A0A2P5B523|A0A2P5B523_PARAD (Immunoglobulin-like fold containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_270910 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.3e-22
Identity = 80/218 (36.70%), Postives = 115/218 (52.75%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60
           M E+SQS+PLA  + H + +EE    TFK +RKER+NKCFIY+F+  V LS+ LL+FALI
Sbjct: 1   MAEESQSWPLAPSRLHRRSDEES--PTFKAIRKERANKCFIYVFAGIVILSILLLVFALI 60

Query: 61  VLRVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGL 120
           VLR  SP++ L                                             +   
Sbjct: 61  VLRPKSPAVKL----RSISVKSLRYTTSPWPDINATLVAEVSIENPNFGPYRFENSSAKF 120

Query: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVE-GSAKNVSGSN--------GILNFSSFVKL 180
           +YGG   GER  G GR GAKG+ R+++T+E  S++   G+N        G+   SS+ ++
Sbjct: 121 LYGGQKIGERRFGKGRVGAKGTGRLSLTMEVRSSRLPEGANELSSDLNSGVFKMSSYARI 180

Query: 181 RGRVRLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
            G+VRLI I + R +SE+ C+M L L T +IQ +W C+
Sbjct: 181 SGKVRLIKIIQTRKTSEMRCNMTLVLKTKKIQ-DWRCD 211

[Close]

BLAST of CsGy5G002260 vs. TrEMBL
Match: tr|W9SZD3|W9SZD3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006690 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.4e-19
Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 0


Query: 3   EDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALIVL 62
           ++SQS+PLA  + H + +EE     FK LRKER+NKCF+YIF+  V L   LLIFALIVL
Sbjct: 4   QESQSWPLAPMRVHQRSDEEN--PAFKALRKERTNKCFVYIFAGIVILGAILLIFALIVL 63

Query: 63  RVNSPSISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGLVY 122
           R  SP I L                                             +   +Y
Sbjct: 64  RSKSPEIKL---KSVTVKSLDYSTSPWPSLNATLIATVAIKNPNFGPYRFGSNNSAVFLY 123

Query: 123 GGMIFGERSTGGGRAGAKGSKRMNVTVE-------GSAKNVSG--SNGILNFSSFVKLRG 182
           GG   GE+    G+A AK +KR+NVTVE         + N+ G  S+G++N SS+ K  G
Sbjct: 124 GGGKLGEQRIRQGKATAKATKRVNVTVEIRTSRLPQGSNNLGGDLSSGMVNLSSYCKFTG 183

Query: 183 RVRLIHIFRRRVSSEISCSMNLDLNTHQIQH 205
           RV LI IF  R ++E++C+M L L T  I++
Sbjct: 184 RVHLIKIFENRKTAEMNCAMTLVLKTKMIKN 209

The following BLAST results are available for this feature:

BLAST of CsGy5G002260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143966.1	3.0e-77	99.52	PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus] >KGN50051.1 hy...	[more]
XP_008437349.1	3.7e-59	70.81	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]	[more]
XP_022969774.1	5.3e-50	61.68	uncharacterized protein LOC111468875 [Cucurbita maxima]	[more]
XP_022958536.1	2.9e-40	58.02	uncharacterized protein LOC111459739 [Cucurbita moschata]	[more]
XP_023532981.1	6.5e-40	57.55	uncharacterized protein LOC111794996 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G002260 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy5G002260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G002260 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KQT7\|A0A0A0KQT7_CUCSA	2.0e-77	99.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1	[more]
tr\|A0A1S3ATY3\|A0A1S3ATY3_CUCME	2.4e-59	70.81	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A2P5FIX5\|A0A2P5FIX5_9ROSA	5.3e-22	36.70	Immunoglobulin-like fold containing protein OS=Trema orientalis OX=63057 GN=TorR...	[more]
tr\|A0A2P5B523\|A0A2P5B523_PARAD	5.3e-22	36.70	Immunoglobulin-like fold containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|W9SZD3\|W9SZD3_9ROSA	9.4e-19	36.97	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006690 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G002260.1	CsGy5G002260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 101..192 e-value: 4.6E-9 score: 36.6
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 1..208
None	No IPR available	PANTHER	PTHR31852:SF10	SUBFAMILY NOT NAMED	coord: 1..208

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G002260	Cla011408	Watermelon (97103) v1	cgybwmB381
CsGy5G002260	ClCG01G002280	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G002260	CmoCh15G013220	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G002260	Lsi09G002100	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G002260	Cla97C01G002320	Watermelon (97103) v2	cgybwmbB319
CsGy5G002260	Bhi12G000165	Wax gourd	cgybwgoB413

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G002260	Melon (DHL92) v3.6.1	cgybmedB331
CsGy5G002260	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G002260	Melon (DHL92) v3.6.1	cgybmedB351
CsGy5G002260	Melon (DHL92) v3.6.1	cgybmedB357
CsGy5G002260	Watermelon (Charleston Gray)	cgybwcgB358
CsGy5G002260	Watermelon (Charleston Gray)	cgybwcgB360
CsGy5G002260	Watermelon (Charleston Gray)	cgybwcgB364
CsGy5G002260	Watermelon (97103) v1	cgybwmB374
CsGy5G002260	Watermelon (97103) v1	cgybwmB378
CsGy5G002260	Wild cucumber (PI 183967)	cgybcpiB211
CsGy5G002260	Wild cucumber (PI 183967)	cgybcpiB224
CsGy5G002260	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G002260	Wild cucumber (PI 183967)	cgybcpiB243
CsGy5G002260	Silver-seed gourd	carcgybB0912
CsGy5G002260	Silver-seed gourd	carcgybB0927
CsGy5G002260	Cucumber (Chinese Long) v3	cgybcucB229
CsGy5G002260	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G002260	Cucumber (Chinese Long) v3	cgybcucB214
CsGy5G002260	Cucumber (Chinese Long) v3	cgybcucB243
CsGy5G002260	Watermelon (97103) v2	cgybwmbB363
CsGy5G002260	Watermelon (97103) v2	cgybwmbB370
CsGy5G002260	Watermelon (97103) v2	cgybwmbB371
CsGy5G002260	Cucumber (Gy14) v2	cgybcgybB146
CsGy5G002260	Cucumber (Gy14) v2	cgybcgybB089
CsGy5G002260	Cucumber (Gy14) v2	cgybcgybB127
CsGy5G002260	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G002260	Cucurbita maxima (Rimu)	cgybcmaB620
CsGy5G002260	Cucurbita maxima (Rimu)	cgybcmaB622
CsGy5G002260	Cucurbita maxima (Rimu)	cgybcmaB635
CsGy5G002260	Cucurbita maxima (Rimu)	cgybcmaB661
CsGy5G002260	Cucurbita moschata (Rifu)	cgybcmoB596
CsGy5G002260	Cucurbita moschata (Rifu)	cgybcmoB599
CsGy5G002260	Cucurbita moschata (Rifu)	cgybcmoB606
CsGy5G002260	Cucurbita moschata (Rifu)	cgybcmoB613
CsGy5G002260	Cucurbita moschata (Rifu)	cgybcmoB639
CsGy5G002260	Cucurbita moschata (Rifu)	cgybcmoB681
CsGy5G002260	Cucurbita pepo (Zucchini)	cgybcpeB584
CsGy5G002260	Cucurbita pepo (Zucchini)	cgybcpeB596
CsGy5G002260	Cucurbita pepo (Zucchini)	cgybcpeB597
CsGy5G002260	Cucurbita pepo (Zucchini)	cgybcpeB619
CsGy5G002260	Cucurbita pepo (Zucchini)	cgybcpeB691
CsGy5G002260	Cucumber (Chinese Long) v2	cgybcuB210
CsGy5G002260	Cucumber (Chinese Long) v2	cgybcuB222
CsGy5G002260	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G002260	Cucumber (Chinese Long) v2	cgybcuB236
CsGy5G002260	Bottle gourd (USVL1VR-Ls)	cgyblsiB304
CsGy5G002260	Bottle gourd (USVL1VR-Ls)	cgyblsiB347
CsGy5G002260	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G002260	Melon (DHL92) v3.5.1	cgybmeB329
CsGy5G002260	Melon (DHL92) v3.5.1	cgybmeB351
CsGy5G002260	Melon (DHL92) v3.5.1	cgybmeB353
CsGy5G002260	Melon (DHL92) v3.5.1	cgybmeB355