Cp4.1LG05g03220.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCTCAAAAACGAACCGTCCAACAAATGCTTCATCTACCTCTTCTCCGCCTTCGTCTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGTAAGTTTTCCATCTCTAATACTAATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCGTCGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGCGGCGTCATCGTCGGCGAAAGGAGTAGTGGCGGGGGTAGGGCTGAGGCGAAGGGGACGACGAGGATGAATGTTTCTGTTGAAGGTTCTGTGGAGAATGTTAGCAGCGATTTGAATGGTTCGGGGATTTTAAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCGTTTGATTCATGTTTTAAGGAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTAATCTGGATTTGAATACTCATCAAATTCTGCCTCGTTGGGTTTGTGAGTGATTTAGAATCATAGTTTTTGATGAACTCGAGAACCCTAATTACTCTCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATGTTCATTTAAATGTTTATCAGAGACAATTAAAACCCATTAAAGACCTCAATTAATGGGAAAATATGAACCACCGTTTTATCATATATCCCCTTTCACTTCTATAAAACCATTCCTTTCACAGCCCCACAAATCCCCTCATACTCCTCCACCACCAACCGGAATCAATGGCGGCCGACGAAACATCTGGCGACTTGCCGGCGACACTCCGATCAAGGCGAAAAGCATCAGAAAAATACATCAATACCTCCTGCATTTACCTCTTCGCTATCGCTTCCATTGCCTGCATCATCGCCCTGACCCTCTGTCTTCCATCGCAGTAAAAAATCTGCACTACGGCTCCTCGCCGACCCCTCCCATGGATGCCACATTAATCGCCGAATTAACATGGGAAAATCCCAATGGGGAGGTGTTAGATGAACCCGACTCTCTATAATAGTATAATATTGTCTAATTGGGAGGGGTTAGATGAACCGGAATCTCCATAATAGTATAATATTGGGAGGTATTGTCTAATTGGGAGGTGTTAGATGAACCGGATTCTCCAAAAGGTCTTAGAGCATTCTGGATTTAGGGATTCTCCAAAAGGTCTTAGAGCATTCTGGATTATAATCCTATGTTCCCGTGAGACTTTCATCATTCAACATGAGGAATAAAACAAACATCAGGTCGATTTACATTGGGCGTGATCGGCGAGGTGAAAAGGGTCGTCTGTAAATGCAGTGGGTATTAAAAACAGGAAGTTTACAGTGAAAGTGAAACTGAATCCGAGCTTGAAAAATGGTTGGATGTGACCAATTTTTTTTTTTGCCTAATTTTCTGTTCCCTTTTTCCACAGCAATTTTTCCAACCTAATGACCTTGAAAAAGAAACCTACGATGTTAACCAAAAAAATCTTAATACCTTTTAATTTATAAAATTTCTTTAATTGCTTCATACATATTAATTTTACCTTACTAACTTTAATTAATGATGTATTATTTATTGCATTCTAAGACTTAATTTCACCATAACTTCAATTTGATTTATATAATTTTTTTTTAAAATTTGTTCTATATAATTTGGTCAAATATTTTAAACTAAAAAAAAAAAAAAAAACAAATAATAAATCAATAATATGAATGGATAGTTCTTAGATAACAACTAATATTAAATAGAAACATAATTATTTTTTGTTTAGAAAATTCAATACTAAATTGCCATAATTCTAAAATAAAAAAATACCAAATTTTGTAATTTAAAATTATTTATATTCATATCCTTCTTGACGTACAAGTTATTCAAAGCTAATCGAGTCAACCTTTTGCCCAAATCAACACGCATTTTTGACAAACTAATTATTTTAAAAAACACTGACTTTTATAATTCTAAAATAAAATAAAAATTAAAAATAAAAATGAATTTGAAATCCCAACAATTAAATACCCAACATATCCCTTCTTTTACGATCATTTCCCCCATAGCCATGGCCGAGAAAGACCAGGTCAAACCCTTGGCTTCCCCCGCCACCCATCTCCGGAGCGACGACGATCACTTTCTTCCTCCTCCGGCCAAGCTCCGCCTCCATAGAAACAAATACATCATGTGCTCTGGCTGCTTCGCCGCTCTCCTCTTGATCCTCGCCGTTATCGGCATCGTCCTCGGCTTCACCGTCCTCCATATCAAAACCCCAGATCTCAAAATCGATAAGCTCTCGTTTTCAAATGCTACTTCAAGTAAGTTTAACGTTAGAAGAATTTGATTATGTCAAAAAAAAAAAAAAATGGAATCGTTAGAGTATTGTTAGGAATTTAATTTAATTATTTGCGTGTTAGTTCACTAATGTCGAAAATTCCAATTATTTATGTTTCTCGCTTAGTTGTTGTTATGTCAAAATCTAACACTTAAATGAGTTTTAATAATCATTTAAAATTCACTGTTCTTCTTTATCAGACGGCGGCATAATCATTGTGGCTAGTGTCTTCGTGCGGAATCCTAATTTCGCGTCGTTCAAATACTCAAAAGCGACGACGGTGATTTACTACCACGGCGAGGTGATCGGAGAGGGAGAGACGCCAGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAGGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTAAATATCAGTAGCTACACGGAAATTCCAGGAAGGGTCAAAATAATTGGATTCATCAAGAAAAAGTTTGCGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAA TTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCTCAAAAACGAACCGTCCAACAAATGCTTCATCTACCTCTTCTCCGCCTTCGTCTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGTAAGTTTTCCATCTCTAATACTAATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCGTCGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGCGGCGTCATCGTCGGCGAAAGGAGTAGTGGCGGGGGTAGGGCTGAGGCGAAGGGGACGACGAGGATGAATGTTTCTGTTGAAGGTTCTGTGGAGAATGTTAGCAGCGATTTGAATGGTTCGGGGATTTTAAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCGTTTGATTCATGTTTTAAGGAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTAATCTGGATTTGAATACTCATCAAATTCTGCCTCCCATGGCCGAGAAAGACCAGGTCAAACCCTTGGCTTCCCCCGCCACCCATCTCCGGAGCGACGACGATCACTTTCTTCCTCCTCCGGCCAAGCTCCGCCTCCATAGAAACAAATACATCATTGTCTTCGTGCGGAATCCTAATTTCGCGTCGTTCAAATACTCAAAAGCGACGACGGTGATTTACTACCACGGCGAGGTGATCGGAGAGGGAGAGACGCCAGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAGGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTAAATATCAGTAGCTACACGGAAATTCCAGGAAGGGTCAAAATAATTGGATTCATCAAGAAAAAGTTTGCGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAA TTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCTCAAAAACGAACCGTCCAACAAATGCTTCATCTACCTCTTCTCCGCCTTCGTCTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGTAAGTTTTCCATCTCTAATACTAATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCGTCGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGCGGCGTCATCGTCGGCGAAAGGAGTAGTGGCGGGGGTAGGGCTGAGGCGAAGGGGACGACGAGGATGAATGTTTCTGTTGAAGGTTCTGTGGAGAATGTTAGCAGCGATTTGAATGGTTCGGGGATTTTAAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCGTTTGATTCATGTTTTAAGGAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTAATCTGGATTTGAATACTCATCAAATTCTGCCTCCCATGGCCGAGAAAGACCAGGTCAAACCCTTGGCTTCCCCCGCCACCCATCTCCGGAGCGACGACGATCACTTTCTTCCTCCTCCGGCCAAGCTCCGCCTCCATAGAAACAAATACATCATTGTCTTCGTGCGGAATCCTAATTTCGCGTCGTTCAAATACTCAAAAGCGACGACGGTGATTTACTACCACGGCGAGGTGATCGGAGAGGGAGAGACGCCAGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAGGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTAAATATCAGTAGCTACACGGAAATTCCAGGAAGGGTCAAAATAATTGGATTCATCAAGAAAAAGTTTGCGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAA FPLPHSQAHHKTLKNEPSNKCFIYLFSAFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSVDNSNFGPFIFDYVTVVFMYGGVIVGERSSGGGRAEAKGTTRMNVSVEGSVENVSSDLNGSGILNMSSFAKFGGRIRLIHVLRKRIWSEISCSINLDLNTHQILPPMAEKDQVKPLASPATHLRSDDDHFLPPPAKLRLHRNKYIIVFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTIEKEDCDQ
BLAST of Cp4.1LG05g03220.1 vs. Swiss-Prot
Match: Y1465_ARATH (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana GN=At1g64065 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.4e-11 Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TrEMBL
Match: A0A0A0KQT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152160 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.3e-55 Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TrEMBL
Match: A0A0A0KMH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152140 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36 Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TrEMBL
Match: W9SZD3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006690 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24 Identity = 81/184 (44.02%), Postives = 115/184 (62.50%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TrEMBL
Match: M5WYG1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022176mg PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23 Identity = 72/201 (35.82%), Postives = 122/201 (60.70%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TrEMBL
Match: A5CBV1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02080 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.6e-23 Identity = 55/115 (47.83%), Postives = 79/115 (68.70%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-20 Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TAIR10
Match: AT1G64065.1 (AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12 Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11 Identity = 28/126 (22.22%), Postives = 65/126 (51.59%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TAIR10
Match: AT4G23610.1 (AT4G23610.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07 Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. TAIR10
Match: AT4G13270.1 (AT4G13270.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 52.0 bits (123), Expect = 8.6e-07 Identity = 36/141 (25.53%), Postives = 64/141 (45.39%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. NCBI nr
Match: gi|659073967|ref|XP_008437349.1| (PREDICTED: uncharacterized protein LOC103482793 [Cucumis melo]) HSP 1 Score: 229.9 bits (585), Expect = 6.5e-57 Identity = 130/198 (65.66%), Postives = 155/198 (78.28%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. NCBI nr
Match: gi|449452438|ref|XP_004143966.1| (PREDICTED: uncharacterized protein LOC101212642 [Cucumis sativus]) HSP 1 Score: 223.8 bits (569), Expect = 4.7e-55 Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. NCBI nr
Match: gi|659073969|ref|XP_008437350.1| (PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo]) HSP 1 Score: 162.5 bits (410), Expect = 1.3e-36 Identity = 77/117 (65.81%), Postives = 98/117 (83.76%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. NCBI nr
Match: gi|778708243|ref|XP_004143964.2| (PREDICTED: uncharacterized protein LOC101212153 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1
BLAST of Cp4.1LG05g03220.1 vs. NCBI nr
Match: gi|700194872|gb|KGN50049.1| (hypothetical protein Csa_5G152140 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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