Csa5G129300 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTATTCCAACCCTAACCCTTTCTCTCCCCTAAAGTCCTCCGGCACATAACCAAAAAAAAACTACAGGTCAAAGAAGAAAATTTGATAATTGTGTTCTTAAATTAATACTTCCTTTTGACAAGAAAGAAAATGGGCGTGGCGTCATTGGATTGAGATCATATTCTCATAAACCAAGAAACTAGGGTTTCATCTTGTCAGGGATTAGATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCCCCGCCCGCCCCGACCCCCCCCCCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTAATATTCTTCTTAACTATGTTGTTTCTTTACAGATATTTCTATTTGTAATAAGTTGGAGTTCTGATGTGTTTTCATGACAGGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTGAGTGAGTAGCCAATCTAATTTTCTTGTTTCTTCTTTAACTGTTCTTCTGTTTATTTCAAATCCGCTGAGTGCTGCATTAGAATTCTGTTAGAATGACCGAAATTAATATCAGAATTCTTTGGGTTTTTGTATTCTAGACTTGTTTTTGCTGATCATTTTTGGATCGTTATCACTTATCAGGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGCCCTTTCCCCTCCTTTATGAAAGAGTTTCATTAATCGATCTCTAAGATTTTTACTTGTGTGTACTTTATATGAATTGTGAACAATTTGAGCAAGTTATCGGGGGTACACAATGGAATCATTCTGCATTTTGTGCATTAACACAAAAATTAAGCTTTACATGGAATTTGTCGTTCCTTGATTATTAACTTGTCTTCTGGTTTATCGGGGGTACTAAATAGTGTGAAATGCCGTTTAAAACAACCATTTGTTATAATTGAGGTGGATGTGGATATTTTCCATTGACATTTATGAAGTGTGTTCAACTGCGCATTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGGTATTTCATACCTTTGCTTTCATATTGTTTTACTTTTACCCTTTGGGATGATATTGTTATGTTATTTACTCTGGATGTGAGTTAATTATAGTCTTAGTGATTAGCTACCTAAGATGCCAGTTTCTGACAAATTTTCTGGATCCCAAATATAAGATTCTAGTGGTACCCTTGTCACCCTGTAATGTTAGAAAATGTATGCCTTTGTTCTATATTCTATGCATGTGTATAGGTATGGATCGTTAGACTACAAACTAAGTGCATGGTTGGGACTGATTATTTAACGGTTAAAATTACTTCGAAGAACACAAAATTTAATCACTCTAAGCCAATTTAACGTTTAATTTTACATTTTAAAACCCATTTCAAACTATTAAACTGGATTTTGATGAATTACTAAAGCATTTTTCGAATGATTTTAACCATTTTTTAATTACTCCCCAACATTCCTTAACATGCCCTGAGCTACCACGTGAAAGTGGGAAAAATATACTTCTGCGCTTTAGTAGACAGTATACTGTTTCTGACGAGGAATAAAAAAATGTGTAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAACGCACTTCTCAGACTGTTGCTTCTCTGCAATTGGACGTAACTTGCTTGATAAATTAACCATCAAGGATAAAGATCTTAGTCCTACGAATATTCTTTCACATCAGGATAGTCATCTCAGGACCTCAGGTTAGGGAGGGAAGAAATTCATAATTCATAGTTGTAAAGTCGGCTGAGTAACTTATGAGTCGAAGTAAGTTTTGGATATAATGATATTGATAATGTGATTTGCCCTCTTTGCCCTATCTGGCCGTGTCTAGTCTAAATGTTGAGATTGAGAACATGTACAATATTGATGTTGGAAAAATGGAAAATTACAAACTAATATTTATATGTTTTGACGTAGTTGAGATCTTATGCTTATATGTTATTAATTGAT ATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCCCCGCCCGCCCCGACCCCCCCCCCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAA ATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCCCCGCCCGCCCCGACCCCCCCCCCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAA MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIPAVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR*
BLAST of Csa5G129300 vs. Swiss-Prot
Match: CI078_MOUSE (Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22 Identity = 101/320 (31.56%), Postives = 147/320 (45.94%), Query Frame = 1
BLAST of Csa5G129300 vs. Swiss-Prot
Match: CI078_HUMAN (Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.8e-22 Identity = 105/326 (32.21%), Postives = 150/326 (46.01%), Query Frame = 1
BLAST of Csa5G129300 vs. Swiss-Prot
Match: CI078_PONAB (Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21 Identity = 104/326 (31.90%), Postives = 149/326 (45.71%), Query Frame = 1
BLAST of Csa5G129300 vs. TrEMBL
Match: A0A0A0KLP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1) HSP 1 Score: 637.1 bits (1642), Expect = 1.1e-179 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1
BLAST of Csa5G129300 vs. TrEMBL
Match: M5XB50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009015mg PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-108 Identity = 212/313 (67.73%), Postives = 241/313 (77.00%), Query Frame = 1
BLAST of Csa5G129300 vs. TrEMBL
Match: A0A059DCY5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00989 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 4.4e-107 Identity = 205/314 (65.29%), Postives = 238/314 (75.80%), Query Frame = 1
BLAST of Csa5G129300 vs. TrEMBL
Match: A0A067H423_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 2.2e-106 Identity = 206/314 (65.61%), Postives = 240/314 (76.43%), Query Frame = 1
BLAST of Csa5G129300 vs. TrEMBL
Match: V4U1H6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 2.2e-106 Identity = 206/314 (65.61%), Postives = 240/314 (76.43%), Query Frame = 1
BLAST of Csa5G129300 vs. TAIR10
Match: AT1G02330.1 (AT1G02330.1 Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756)) HSP 1 Score: 309.7 bits (792), Expect = 2.1e-84 Identity = 180/319 (56.43%), Postives = 214/319 (67.08%), Query Frame = 1
BLAST of Csa5G129300 vs. NCBI nr
Match: gi|700194617|gb|KGN49794.1| (hypothetical protein Csa_5G129300 [Cucumis sativus]) HSP 1 Score: 637.1 bits (1642), Expect = 1.6e-179 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1
BLAST of Csa5G129300 vs. NCBI nr
Match: gi|778698558|ref|XP_011654560.1| (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus]) HSP 1 Score: 596.7 bits (1537), Expect = 2.5e-167 Identity = 305/319 (95.61%), Postives = 305/319 (95.61%), Query Frame = 1
BLAST of Csa5G129300 vs. NCBI nr
Match: gi|659072561|ref|XP_008466165.1| (PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo]) HSP 1 Score: 579.3 bits (1492), Expect = 4.1e-162 Identity = 298/319 (93.42%), Postives = 299/319 (93.73%), Query Frame = 1
BLAST of Csa5G129300 vs. NCBI nr
Match: gi|658015798|ref|XP_008343229.1| (PREDICTED: integrator complex subunit 10-like protein [Malus domestica]) HSP 1 Score: 404.4 bits (1038), Expect = 1.8e-109 Identity = 210/314 (66.88%), Postives = 242/314 (77.07%), Query Frame = 1
BLAST of Csa5G129300 vs. NCBI nr
Match: gi|645242923|ref|XP_008227750.1| (PREDICTED: putative uncharacterized protein DDB_G0292292 [Prunus mume]) HSP 1 Score: 402.1 bits (1032), Expect = 8.9e-109 Identity = 213/313 (68.05%), Postives = 241/313 (77.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None |