Cp4.1LG01g18780 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g18780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHepatocellular carcinoma-associated antigen 59
LocationCp4.1LG01 : 16180358 .. 16181391 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAATTGATAAAAGAGTTTGGAGGCGACATTGGAGGGAGAATTGAGATCACATTTTGAGAAAGAAAAGCCTGAATCTAGGGCTTTCTTCCGGTAGGATTAGATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAAAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTGGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGTTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTAATATTCTCCTTAATTGTATCGTTCTCAACGAAATTTTTCTATTTGATGGATTGTATTCTAGGAATTGAGGTGGGGGATGTTTTTATATGTTTAAAATTGGGGGTTTGATGAGTTCTCATAATAGGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAGTGAGTAGTCAATCTAGTGTTCTTAGCGTTCTTGTTTCATATCTTTCAGTTCTTCTGTTCATTGCTATTTCACTGAGTGCTGCATTTGATTTTTGTTAGAATGATCGAAGCTAGTATTTGGATTCATCCGGTTTGTATATTCTGGGATTTGGTTATGCTTATCATTTTTTGGATTTTTCAGGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGTCCTTCCCCTCCTTTTTGAAAGAGTTTAA

mRNA sequence

TGAATTGATAAAAGAGTTTGGAGGCGACATTGGAGGGAGAATTGAGATCACATTTTGAGAAAGAAAAGCCTGAATCTAGGGCTTTCTTCCGGTAGGATTAGATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAAAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTGGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGTTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGTCCTTCCCCTCCTTTTTGAAAGAGTTTAA

Coding sequence (CDS)

ATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAAAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTGGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGTTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGTCCTTCCCCTCCTTTTTGAAAGAGTTTAA

Protein sequence

MNQPSKKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVSTQTGTAGAVGGLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEYVLPLLFERV
Homology
[Close]
BLAST of Cp4.1LG01g18780 vs. Swiss-Prot
Match: CI078_MOUSE (Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-08
Identity = 66/197 (33.50%), Postives = 96/197 (48.73%), Query Frame = 1 

Query: 8   KNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVST 67
           K FR+R           A+S S + E+E EE RL LEE + +Q  R+R  G+ A      
Sbjct: 6   KTFRRRR----------ADSESEEDEQESEEVRLKLEETREVQNLRKRPNGVSA------ 65

Query: 68  QTGTAGAVGGLVRKPTDANSNIGGGGGGGN------KNEGVGGEGDKDDLVLQDTFAQET 127
               A  VG  V++ T    +      GG       K  G     +++DL L  +F+ ET
Sbjct: 66  ---AALLVGEKVQEETTLVDDPFQMATGGMVDMKKLKERGKDKVSEEEDLHLGTSFSAET 125

Query: 128 AVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNES- 187
               ED +M+KYIE EL K++G   +  + A+   K AED LY++PE+++V      E  
Sbjct: 126 NRRDEDADMMKYIETELKKRKGIVEQEEQKAKP--KNAEDCLYELPENIRVSSAKKTEEM 181

Query: 188 -STQWTTGIAEVQLPIE 197
            S Q  +GI EV L I+
Sbjct: 186 LSNQMLSGIPEVDLGID 181

[Close]
BLAST of Cp4.1LG01g18780 vs. Swiss-Prot
Match: CI078_HUMAN (Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06
Identity = 68/201 (33.83%), Postives = 98/201 (48.76%), Query Frame = 1 

Query: 4   PSKKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIP 63
           P  +K FR+R   DSE   D         E++ EE RL LEE + +Q  R+R  G+ A+ 
Sbjct: 2   PVVRKIFRRRRG-DSESEED---------EQDSEEVRLKLEETREVQNLRKRPNGVSAVA 61

Query: 64  AVSTQTGTAGAVGGLVRKPTDANSNIGGGGGGGN------KNEGVGGEGDKDDLVLQDTF 123
            +         VG  V++ T    +      GG       K  G     +++DL L  +F
Sbjct: 62  LL---------VGEKVQEETTLVDDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTSF 121

Query: 124 AQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNS 183
           + ET    ED +M+KYIE EL K++G  VE+ E      K AED LY++PE+++V     
Sbjct: 122 SAETNRRDEDADMMKYIETELKKRKG-IVEHEEQKVKP-KNAEDCLYELPENIRVSSAKK 181

Query: 184 NES--STQWTTGIAEVQLPIE 197
            E   S Q  +GI EV L I+
Sbjct: 182 TEEMLSNQMLSGIPEVDLGID 181

[Close]
BLAST of Cp4.1LG01g18780 vs. TrEMBL
Match: A0A0A0KLP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-83
Identity = 177/218 (81.19%), Postives = 182/218 (83.49%), Query Frame = 1 

Query: 1   MNQPSKKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIP 60
           MNQPSKKKNFRKRNC DSEDGGD+ANSV+   EEEEEEHR+ALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AIPAVSTQTGTAGA-------------------VGGLVRKPTDANSNIGGGGGGGNKNEG 120
           A+P VS QT TAGA                    GGLVRK TDANS    GGGGGNKNE 
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKT--GGGGGNKNES 120

Query: 121 VGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAED 180
            GGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAED
Sbjct: 121 AGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAED 180

Query: 181 ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEYVL 200
           ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKL 216

[Close]
BLAST of Cp4.1LG01g18780 vs. TrEMBL
Match: M5XB50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009015mg PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.9e-52
Identity = 129/203 (63.55%), Postives = 149/203 (73.40%), Query Frame = 1 

Query: 7   KKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVS 66
           KKNFRKRN   +ED   D+  +S + +EEEEE RLALEEVKFLQKQRER++GIPA+    
Sbjct: 11  KKNFRKRNA-PAEDN-QDSEKISDQEDEEEEERRLALEEVKFLQKQRERKSGIPAL---- 70

Query: 67  TQTGTAGAVGGLVRKPTDANSNIG---------GGGGGGNKN-EGVGGEGDKDDLVLQDT 126
           T  G    +        ++N+N           G     NK+ EG GG+GDKDDLVLQDT
Sbjct: 71  TSNGATQNIPSTTNNNNNSNNNTNLDKNKRGSDGTHSPSNKHGEGGGGDGDKDDLVLQDT 130

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRN 186
           FAQETAVMVEDPNMLKY+EQELAKKRGR ++  +  ENDLK+AEDELYKIP+HLKVKRRN
Sbjct: 131 FAQETAVMVEDPNMLKYVEQELAKKRGRKIDASDQVENDLKRAEDELYKIPDHLKVKRRN 190

Query: 187 SNESSTQWTTGIAEVQLPIEYVL 200
           S ESSTQWTTGIAEVQLPIEY L
Sbjct: 191 SEESSTQWTTGIAEVQLPIEYKL 207

[Close]
BLAST of Cp4.1LG01g18780 vs. TrEMBL
Match: A0A0V0HZM9_SOLCH (Putative hepatocellular carcinoma-associated antigen 59-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.2e-51
Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 1 

Query: 6   KKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAV 65
           K++NFRKR+  D  DG DD+++      ++E+E RLALEEVKFLQKQRER+ G+PA+ + 
Sbjct: 3   KRRNFRKRSRVD--DGEDDSSTKDNNGSDDEQERRLALEEVKFLQKQRERKLGVPAVSST 62

Query: 66  STQTGTAG-----AVGGLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQDTFAQE 125
           ++Q    G     + GGLVRK  D                   G+G+KD+LVLQDTFAQE
Sbjct: 63  TSQVAAGGGGSNSSAGGLVRKVNDKGE----------------GDGEKDELVLQDTFAQE 122

Query: 126 TAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNES 185
           TAVM EDPNML+Y+EQELAKKRG+ V+  +  EN++K+AEDELYKIPEHLKVKRRNS ES
Sbjct: 123 TAVMEEDPNMLRYVEQELAKKRGKNVDVADQVENEVKRAEDELYKIPEHLKVKRRNSEES 182

Query: 186 STQWTTGIAEVQLPIEYVL 200
           STQWTTGIAE+QLPIEY L
Sbjct: 183 STQWTTGIAEIQLPIEYKL 183

[Close]
BLAST of Cp4.1LG01g18780 vs. TrEMBL
Match: V4U1H6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-51
Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 1 

Query: 6   KKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAV 65
           KKKNFRKR+  + E+        + KL ++EEE RLALEE+KFLQKQRER++GIPAIP+ 
Sbjct: 11  KKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPS- 70

Query: 66  STQTGTAGAVGGLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQDTFAQETAVMV 125
           + Q+  A   GGL +                 KNE   G+G+KD+LVLQDTFAQETAVMV
Sbjct: 71  ALQSAAAAGGGGLTKV--------------SEKNE---GDGEKDELVLQDTFAQETAVMV 130

Query: 126 EDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWT 185
           EDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS ESSTQWT
Sbjct: 131 EDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWT 179

Query: 186 TGIAEVQLPIEYVL 200
           TGIAEVQLPIEY L
Sbjct: 191 TGIAEVQLPIEYKL 179

[Close]
BLAST of Cp4.1LG01g18780 vs. TrEMBL
Match: A0A067H423_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-51
Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 1 

Query: 6   KKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAV 65
           KKKNFRKR+  + E+        + KL ++EEE RLALEE+KFLQKQRER++GIPAIP+ 
Sbjct: 11  KKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPS- 70

Query: 66  STQTGTAGAVGGLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQDTFAQETAVMV 125
           + Q+  A   GGL +                 KNE   G+G+KD+LVLQDTFAQETAVMV
Sbjct: 71  ALQSAAAAGGGGLTKV--------------SEKNE---GDGEKDELVLQDTFAQETAVMV 130

Query: 126 EDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWT 185
           EDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS ESSTQWT
Sbjct: 131 EDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWT 179

Query: 186 TGIAEVQLPIEYVL 200
           TGIAEVQLPIEY L
Sbjct: 191 TGIAEVQLPIEYKL 179

[Close]
BLAST of Cp4.1LG01g18780 vs. TAIR10
Match: AT1G02330.1 (AT1G02330.1 Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756))

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 112/193 (58.03%), Postives = 138/193 (71.50%), Query Frame = 1 

Query: 7   KKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVS 66
           K+NFRKR+  + E+  +D N  +  + EEEE+ RLALEEVKFLQK RER+ GIPA+   S
Sbjct: 4   KRNFRKRSF-EEEEEDNDVNKAA--ISEEEEKRRLALEEVKFLQKLRERKLGIPALS--S 63

Query: 67  TQTGTAGAVGGLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQDTFAQETAVMVE 126
           T   + G V     KP +                    EG+K++LVLQDTFAQETAV++E
Sbjct: 64  TAQSSIGKV-----KPVEKTET----------------EGEKEELVLQDTFAQETAVLIE 123

Query: 127 DPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTT 186
           DPNM+KYIEQELAKKRGR +++ E  EN+LK+ EDELYKIP+HLKVK+R+S ESSTQWTT
Sbjct: 124 DPNMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKRSSEESSTQWTT 170

Query: 187 GIAEVQLPIEYVL 200
           GIAEVQLPIEY L
Sbjct: 184 GIAEVQLPIEYKL 170

[Close]
BLAST of Cp4.1LG01g18780 vs. NCBI nr
Match: gi|778698558|ref|XP_011654560.1| (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 177/204 (86.76%), Postives = 182/204 (89.22%), Query Frame = 1 

Query: 1   MNQPSKKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIP 60
           MNQPSKKKNFRKRNC DSEDGGD+ANSV+   EEEEEEHR+ALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AIPAVSTQTGTAGAVG-----GLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQD 120
           A+P VS QT TAGA G     GLVRK TDANS  GGGGG  NKNE  GGEGDKDDLVLQD
Sbjct: 61  AVPPVSAQTTTAGAGGASGGGGLVRKSTDANSKTGGGGG--NKNESAGGEGDKDDLVLQD 120

Query: 121 TFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRR 180
           TFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRR
Sbjct: 121 TFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRR 180

Query: 181 NSNESSTQWTTGIAEVQLPIEYVL 200
           NSNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 NSNESSTQWTTGIAEVQLPIEFKL 202

[Close]
BLAST of Cp4.1LG01g18780 vs. NCBI nr
Match: gi|700194617|gb|KGN49794.1| (hypothetical protein Csa_5G129300 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-83
Identity = 177/218 (81.19%), Postives = 182/218 (83.49%), Query Frame = 1 

Query: 1   MNQPSKKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIP 60
           MNQPSKKKNFRKRNC DSEDGGD+ANSV+   EEEEEEHR+ALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AIPAVSTQTGTAGA-------------------VGGLVRKPTDANSNIGGGGGGGNKNEG 120
           A+P VS QT TAGA                    GGLVRK TDANS    GGGGGNKNE 
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKT--GGGGGNKNES 120

Query: 121 VGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAED 180
            GGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAED
Sbjct: 121 AGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAED 180

Query: 181 ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEYVL 200
           ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKL 216

[Close]
BLAST of Cp4.1LG01g18780 vs. NCBI nr
Match: gi|659072561|ref|XP_008466165.1| (PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82
Identity = 175/204 (85.78%), Postives = 180/204 (88.24%), Query Frame = 1 

Query: 1   MNQPSKKKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIP 60
           MNQPSKKKNFRKRNC DSEDGGD+ NSV T + EEEEEHR+ALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEGNSV-TAITEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  AIPAVSTQTGTAGA-----VGGLVRKPTDANSNIGGGGGGGNKNEGVGGEGDKDDLVLQD 120
           A+P VSTQ  TAGA      GGLVRK  DANS    GGGGGNKNE  GGEGDKDDLVLQD
Sbjct: 61  AVPPVSTQITTAGAGGASGGGGLVRKSADANSKT--GGGGGNKNESAGGEGDKDDLVLQD 120

Query: 121 TFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRR 180
           TFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRR
Sbjct: 121 TFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRR 180

Query: 181 NSNESSTQWTTGIAEVQLPIEYVL 200
           NSNESSTQWTTGIAEVQLPIE+ L
Sbjct: 181 NSNESSTQWTTGIAEVQLPIEFKL 201

[Close]
BLAST of Cp4.1LG01g18780 vs. NCBI nr
Match: gi|596109344|ref|XP_007221492.1| (hypothetical protein PRUPE_ppa009015mg [Prunus persica])

HSP 1 Score: 212.2 bits (539), Expect = 8.4e-52
Identity = 129/203 (63.55%), Postives = 149/203 (73.40%), Query Frame = 1 

Query: 7   KKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVS 66
           KKNFRKRN   +ED   D+  +S + +EEEEE RLALEEVKFLQKQRER++GIPA+    
Sbjct: 11  KKNFRKRNA-PAEDN-QDSEKISDQEDEEEEERRLALEEVKFLQKQRERKSGIPAL---- 70

Query: 67  TQTGTAGAVGGLVRKPTDANSNIG---------GGGGGGNKN-EGVGGEGDKDDLVLQDT 126
           T  G    +        ++N+N           G     NK+ EG GG+GDKDDLVLQDT
Sbjct: 71  TSNGATQNIPSTTNNNNNSNNNTNLDKNKRGSDGTHSPSNKHGEGGGGDGDKDDLVLQDT 130

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRN 186
           FAQETAVMVEDPNMLKY+EQELAKKRGR ++  +  ENDLK+AEDELYKIP+HLKVKRRN
Sbjct: 131 FAQETAVMVEDPNMLKYVEQELAKKRGRKIDASDQVENDLKRAEDELYKIPDHLKVKRRN 190

Query: 187 SNESSTQWTTGIAEVQLPIEYVL 200
           S ESSTQWTTGIAEVQLPIEY L
Sbjct: 191 SEESSTQWTTGIAEVQLPIEYKL 207

[Close]
BLAST of Cp4.1LG01g18780 vs. NCBI nr
Match: gi|645242923|ref|XP_008227750.1| (PREDICTED: putative uncharacterized protein DDB_G0292292 [Prunus mume])

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-51
Identity = 129/203 (63.55%), Postives = 148/203 (72.91%), Query Frame = 1 

Query: 7   KKNFRKRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVS 66
           KKNFRKRN   +ED   D   +S + +EEEEE RLALEEVKFLQKQRER++GIPA+    
Sbjct: 11  KKNFRKRNA-PAEDN-QDCEKISDQEDEEEEERRLALEEVKFLQKQRERKSGIPAL---- 70

Query: 67  TQTGTAGAVGGLVRKPTDANSNIG---------GGGGGGNKN-EGVGGEGDKDDLVLQDT 126
           T  G    +        ++N+N           G     NK+ EG GG+GDKDDLVLQDT
Sbjct: 71  TSNGATQNIPSTTNNNNNSNNNTNLDKNKRGSDGTHSPSNKHGEGGGGDGDKDDLVLQDT 130

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRN 186
           FAQETAVMVEDPNMLKY+EQELAKKRGR ++  +  ENDLK+AEDELYKIP+HLKVKRRN
Sbjct: 131 FAQETAVMVEDPNMLKYVEQELAKKRGRKIDASDQVENDLKRAEDELYKIPDHLKVKRRN 190

Query: 187 SNESSTQWTTGIAEVQLPIEYVL 200
           S ESSTQWTTGIAEVQLPIEY L
Sbjct: 191 SEESSTQWTTGIAEVQLPIEYKL 207

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g18780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CI078_MOUSE9.7e-0833.50Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2[more]
CI078_HUMAN2.4e-0633.83Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1[more]
BLAST of Cp4.1LG01g18780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLP5_CUCSA2.9e-8381.19Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1[more]
M5XB50_PRUPE5.9e-5263.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009015mg PE=4 SV=1[more]
A0A0V0HZM9_SOLCH2.2e-5158.79Putative hepatocellular carcinoma-associated antigen 59-like OS=Solanum chacoens... [more]
V4U1H6_9ROSI2.9e-5162.89Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1[more]
A0A067H423_CITSI2.9e-5162.89Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g18780 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02330.11.6e-4858.03 Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756)[more]
BLAST of Cp4.1LG01g18780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698558|ref|XP_011654560.1|1.3e-8486.76PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus][more]
gi|700194617|gb|KGN49794.1|4.1e-8381.19hypothetical protein Csa_5G129300 [Cucumis sativus][more]
gi|659072561|ref|XP_008466165.1|1.2e-8285.78PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo][more]
gi|596109344|ref|XP_007221492.1|8.4e-5263.55hypothetical protein PRUPE_ppa009015mg [Prunus persica][more]
gi|645242923|ref|XP_008227750.1|1.1e-5163.55PREDICTED: putative uncharacterized protein DDB_G0292292 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010756Tls1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0080022 primary root development
biological_process GO:0010099 regulation of photomorphogenesis
biological_process GO:0055121 response to high fluence blue light stimulus by blue high-fluence system
cellular_component GO:0005575 cellular_component
cellular_component GO:0016607 nuclear speck
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g18780.1Cp4.1LG01g18780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010756Hepatocellular carcinoma-associated antigen 59PANTHERPTHR13486FAMILY NOT NAMEDcoord: 4..197
score: 2.7
IPR010756Hepatocellular carcinoma-associated antigen 59PFAMPF07052Hep_59coord: 116..197
score: 6.7
NoneNo IPR availableunknownCoilCoilcoord: 142..162
score: -coord: 25..52
scor
NoneNo IPR availablePANTHERPTHR13486:SF2NOVEL PROTEIN (ZGC:103692)coord: 4..197
score: 2.7