Cp4.1LG13g06210 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g06210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Hepatocellular carcinoma-associated antigen 59
Location	Cp4.1LG13 : 4874983 .. 4877490 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGTGATTTTTAAATATAGTATTAAAAAACTAACATTAAAGTATTTTTATTTTGTTTTTTTAGTTTAAAGTTTATTAATGAGATTTTAAAAATATATAGATTTGAAATATTTTAAAAAAGAAAATTATAATTTAATATTTCTTAAAATAATGCATTCTTTTTCACAGGCAAAGAAAATAGAATTGTGTAAGACGTTTGGAGAGTCGGGACTTCATTGGATCATTGGATCATTGGATCATTGGATTGCGATTACAATTTCACAAAGCAAGAAACTAGGGTTTTTTTCTCCGGCGGGGATTTGATGAATCAACAGTCGAAAAGGAAGAATTTCCGGAAAAGGAATTGTTACGATACAGAAGATGGAGAAGATGGGGCGAATTCCACTGCCACCAAATCGGAGGAGGAAGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTTTGCAGAAACAGAGGGAGAGGAGGGCTGGAATTCCTGCACTTCCATCTGTATCGATGCAGACCAGCACCACCGGTGCTAGCGGCGCCAGCGGCGGCGGCGGTGGTCTTGTTAGGAAATCCACTGACGCTAACAGTAAAACTGGTGGCGGCGGGGGCAGTAAGAATGAAAGCGCGGGAGGCGAAGGCGACAAGGATGATTTGGTTCTTCAGGATACCTTTGCTCAGGAAACGGCCGTCATGGTTGAAGATCCTAATATGTATTATTCCCCTTAATTATGTCGTTTCTCAACAAATATATCTATTTGATTAAAAGTGGAGCTCTGACGGGTTCTCTTAACAGGTTGAAGTACATCGAACAGGAACTGGCAAAGAAAAGGGGGAGAACTCTCGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCGGAAGATGAACTATACAAAATCCCGGAGCATCTTAAAGTGAGTGAGTAGCCAATGTAGTGTTCTTGTCTCTTCTTTCGCAGTTCGTCTGTTCAGTTCTATTCGGCTGAGTGCTGCATTAGGCTTTTGTTCGTGTATTCTGGGATTCGATTTCACTTACCATTTTTGGATTGTTGTCAGGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGTCCTTTCTCCTCCCTTGTGAAAGAACTTCATTAATTTGTCCAGTGATCATCACTTCTGTGTACTTTCTGTGAATTATGAGCAATGGAGATCAAGCAGGAGATAAAATGGAATCATACTGATCCAATTACTATTTTGTATTGTAACACAGAAATTAAGTTTTACTTTGGAGCATTTGATTCCTTGGTTAAATAATTTGAAGTGCCGTATAAAATTAAGCATCTGTCATAATTGTGTTGGATGTGGGTATTTTCCACTGACATTTATGAAGTGTGTTCAACTGCTCGTTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCTTTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAAGAGGTGCTTTATATTGTTTATCCTTTGGGAGGATGTTGTTCTATTATTTACTCTTGACGACGTGAGTTTAAGTTTTGGTGATCACGAACCTAAGATTTTAGTTTCATACAAAATTTCTGCATACCAAATATGCGTGCCTATGATCTAAATTCTACACATGGGGTAGTTGGATTGTTAGTTCATAAACTAAACACCTTGATATCAGGAGAAAGGGAGGAAAATATACTCCTATAATTTATAAGATGTTATATTATTTCTGACAAGGAATAAAAAATATGCAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGTATGCGGAGGTAACATATCTCTCGGACTGCTGTTTCTCCAGAATAGGAAGTGACCTACTTGATAAGTTAAGCATCAAGGATAAAGGTTTTGGTCGTACAAATATTCTTTCACATCATGATGGCCATCTCAGGACCTCAGGTTAGAGAGGAAATGAAATCCATTCTTAGTTCATAGTTGTGAAGTCGGCTGACTGACTTATGATTCAAAGAGAGTTTTGGATATACTATCTACTTGTGTCTTAGTCTAGCCTCTTTGTGTTACTTTTTAGGTTTTTCAGCTTTCATGTACTAGTGCAGAGATAGGTCAAAAGATGTGGAAAGAAAACGTCCTTTTATGGTGACGTTGAGACATTGAGAACATGAACGATACCGATGAAGGAAAATTGTAGACGATATGTTATTAGATGATGTCTTAGCTAATTAATTCCAGTTTTATTATGTTAATCTATTCTATCGTCTTTTGTTAGTATTGTGATGCAACATAAA

mRNA sequence

AAAGGGTGATTTTTAAATATAGTATTAAAAAACTAACATTAAAGTATTTTTATTTTGTTTTTTTAGTTTAAAGTTTATTAATGAGATTTTAAAAATATATAGATTTGAAATATTTTAAAAAAGAAAATTATAATTTAATATTTCTTAAAATAATGCATTCTTTTTCACAGGCAAAGAAAATAGAATTGTGTAAGACGTTTGGAGAGTCGGGACTTCATTGGATCATTGGATCATTGGATCATTGGATTGCGATTACAATTTCACAAAGCAAGAAACTAGGGTTTTTTTCTCCGGCGGGGATTTGATGAATCAACAGTCGAAAAGGAAGAATTTCCGGAAAAGGAATTGTTACGATACAGAAGATGGAGAAGATGGGGCGAATTCCACTGCCACCAAATCGGAGGAGGAAGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTTTGCAGAAACAGAGGGAGAGGAGGGCTGGAATTCCTGCACTTCCATCTGTATCGATGCAGACCAGCACCACCGGTGCTAGCGGCGCCAGCGGCGGCGGCGGTGGTCTTGTTAGGAAATCCACTGACGCTAACAGTAAAACTGGTGGCGGCGGGGGCAGTAAGAATGAAAGCGCGGGAGGCGAAGGCGACAAGGATGATTTGGTTCTTCAGGATACCTTTGCTCAGGAAACGGCCGTCATGGTTGAAGATCCTAATATGTTGAAGTACATCGAACAGGAACTGGCAAAGAAAAGGGGGAGAACTCTCGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCGGAAGATGAACTATACAAAATCCCGGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCTTTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGTATGCGGAGGTAACATATCTCTCGGACTGCTGTTTCTCCAGAATAGGAAGTGACCTACTTGATAAGTTAAGCATCAAGGATAAAGGTTTTGGTCGTACAAATATTCTTTCACATCATGATGGCCATCTCAGGACCTCAGGTTAGAGAGGAAATGAAATCCATTCTTAGTTCATAGTTGTGAAGTCGGCTGACTGACTTATGATTCAAAGAGAGTTTTGGATATACTATCTACTTGTGTCTTAGTCTAGCCTCTTTGTGTTACTTTTTAGGTTTTTCAGCTTTCATGTACTAGTGCAGAGATAGGTCAAAAGATGTGGAAAGAAAACGTCCTTTTATGGTGACGTTGAGACATTGAGAACATGAACGATACCGATGAAGGAAAATTGTAGACGATATGTTATTAGATGATGTCTTAGCTAATTAATTCCAGTTTTATTATGTTAATCTATTCTATCGTCTTTTGTTAGTATTGTGATGCAACATAAA

Coding sequence (CDS)

ATGAATCAACAGTCGAAAAGGAAGAATTTCCGGAAAAGGAATTGTTACGATACAGAAGATGGAGAAGATGGGGCGAATTCCACTGCCACCAAATCGGAGGAGGAAGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTTTGCAGAAACAGAGGGAGAGGAGGGCTGGAATTCCTGCACTTCCATCTGTATCGATGCAGACCAGCACCACCGGTGCTAGCGGCGCCAGCGGCGGCGGCGGTGGTCTTGTTAGGAAATCCACTGACGCTAACAGTAAAACTGGTGGCGGCGGGGGCAGTAAGAATGAAAGCGCGGGAGGCGAAGGCGACAAGGATGATTTGGTTCTTCAGGATACCTTTGCTCAGGAAACGGCCGTCATGGTTGAAGATCCTAATATGTTGAAGTACATCGAACAGGAACTGGCAAAGAAAAGGGGGAGAACTCTCGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCGGAAGATGAACTATACAAAATCCCGGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCTTTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGTATGCGGAGGTAA

Protein sequence

MNQQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHRGMRR

Homology

[Close]

BLAST of Cp4.1LG13g06210 vs. Swiss-Prot
Match: CI078_HUMAN (Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15
Identity = 105/311 (33.76%), Postives = 152/311 (48.87%), Query Frame = 1


Query: 7   RKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPA---LP 66
           RK FR+R   D+E  ED         E++ EE R+ LEE + +Q  R+R  G+ A   L 
Sbjct: 5   RKIFRRRRG-DSESEED---------EQDSEEVRLKLEETREVQNLRKRPNGVSAVALLV 64

Query: 67  SVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGE---GDKDDLVLQDT 126
              +Q  TT           LV        KTGG    K     G+    +++DL L  +
Sbjct: 65  GEKVQEETT-----------LV--DDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTS 124

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDL--KQAEDELYKIPEHLKVKR 186
           F+ ET    ED +M+KYIE EL K++G     VE  E  +  K AED LY++PE+++V  
Sbjct: 125 FSAETNRRDEDADMMKYIETELKKRKG----IVEHEEQKVKPKNAEDCLYELPENIRVSS 184

Query: 187 RNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFSIPSSF 246
               E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +      +P++ 
Sbjct: 185 AKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNM 244

Query: 247 SADYFHRGRDYAEKLR---REHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQA---ATDE 301
           + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD+
Sbjct: 245 AVNYVQHNRFYHEELNAPIRRNKEEPKARPLRV-GDTEKPEPERSPPNRKRPANEKATDD 287

[Close]

BLAST of Cp4.1LG13g06210 vs. Swiss-Prot
Match: CI078_MOUSE (Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 5.5e-15
Identity = 102/308 (33.12%), Postives = 150/308 (48.70%), Query Frame = 1


Query: 8   KNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPA---LPS 67
           K FR+R   D+E  ED         E+E EE R+ LEE + +Q  R+R  G+ A   L  
Sbjct: 6   KTFRRRRA-DSESEED---------EQESEEVRLKLEETREVQNLRKRPNGVSAAALLVG 65

Query: 68  VSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGE---GDKDDLVLQDTF 127
             +Q  TT           LV         TGG    K     G+    +++DL L  +F
Sbjct: 66  EKVQEETT-----------LV--DDPFQMATGGMVDMKKLKERGKDKVSEEEDLHLGTSF 125

Query: 128 AQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNS 187
           + ET    ED +M+KYIE EL K++G   +  + A+   K AED LY++PE+++V     
Sbjct: 126 SAETNRRDEDADMMKYIETELKKRKGIVEQEEQKAKP--KNAEDCLYELPENIRVSSAKK 185

Query: 188 NES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFSIPSSFSAD 247
            E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +      +P++ + +
Sbjct: 186 TEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNMAVN 245

Query: 248 YFHRGRDYAEKLR---REHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQA---ATDEFML 301
           Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD++  
Sbjct: 246 YVQHNRFYHEELNAPIRRNKEEPKARPLRV-GDTEKPEPERSPPNRKRPANEKATDDYHY 287

[Close]

BLAST of Cp4.1LG13g06210 vs. Swiss-Prot
Match: CI078_PONAB (Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 104/311 (33.44%), Postives = 151/311 (48.55%), Query Frame = 1


Query: 7   RKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPA---LP 66
           RK FR+R   D+E  ED         E++ EE R+ LEE + +Q  R+R  G+ A   L 
Sbjct: 5   RKIFRRRRG-DSESEED---------EQDSEEVRLKLEETREVQNLRKRPNGVSAVALLV 64

Query: 67  SVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGE---GDKDDLVLQDT 126
              +Q  TT           LV        KTGG    K     G+    +++DL L  +
Sbjct: 65  GEKVQEETT-----------LV--DDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTS 124

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDL--KQAEDELYKIPEHLKVKR 186
           F+ ET    ED +M+KYIE EL K++G     VE  E  +  K AED LY++PE+++V  
Sbjct: 125 FSAETNRRDEDADMMKYIETELKKRKG----IVEHEEQKVKPKNAEDCLYELPENIRVSS 184

Query: 187 RNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFSIPSSF 246
               E   S Q  +GI EV   I+ K+KNI  TE AK +LL E++   +      +P++ 
Sbjct: 185 AKKTEEMLSNQMLSGIPEVDQGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNM 244

Query: 247 SADYFHRGRDYAEKLR---REHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQA---ATDE 301
           + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD+
Sbjct: 245 AVNYVQHNRFYHEELNAPIRRNKEEPKARPLRV-GDTEKPEPERSPPNRKRPANEKATDD 287

[Close]

BLAST of Cp4.1LG13g06210 vs. TrEMBL
Match: A0A0A0KLP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 3.4e-141
Identity = 279/319 (87.46%), Postives = 290/319 (90.91%), Query Frame = 1


Query: 1   MNQQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNCYD+EDG D ANS    SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGA-------------SGGGGGLVRKSTDANSKTGGGGGSKNESAG 120
           A+P VS QT+T GA GA             + GGGGLVRKSTDANSKTGGGGG+KNESAG
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAG 120

Query: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDEL 180
           GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDEL
Sbjct: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL 180

Query: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKS 240
           YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Sbjct: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS 240

Query: 241 EFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAAT 300
           EFSIPSS+SADYFHRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAAT
Sbjct: 241 EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAAT 300

Query: 301 DEFMLERFRKRERHRGMRR 307
           DEFMLERFRKRERHR MRR
Sbjct: 301 DEFMLERFRKRERHRVMRR 319

[Close]

BLAST of Cp4.1LG13g06210 vs. TrEMBL
Match: V4U1H6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 6.6e-100
Identity = 208/304 (68.42%), Postives = 242/304 (79.61%), Query Frame = 1


Query: 3   QQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 282

Query: 303 GMRR 307
            MRR
Sbjct: 308 VMRR 282

[Close]

BLAST of Cp4.1LG13g06210 vs. TrEMBL
Match: A0A067H423_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 6.6e-100
Identity = 208/304 (68.42%), Postives = 242/304 (79.61%), Query Frame = 1


Query: 3   QQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 282

Query: 303 GMRR 307
            MRR
Sbjct: 308 VMRR 282

[Close]

BLAST of Cp4.1LG13g06210 vs. TrEMBL
Match: A0A059DCY5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00989 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.7e-98
Identity = 206/304 (67.76%), Postives = 242/304 (79.61%), Query Frame = 1


Query: 4   QSKRKNFRKRNCYDTEDGEDGANSTATKSE-EEEEEHRMALEEVKFLQKQRERRAGIPAL 63
           Q ++KNFRKR+ +  ++GE GA + A  S  ++EEE R+ALEEVKFLQKQRERR+GIPAL
Sbjct: 2   QQRKKNFRKRS-FQEDEGEAGAGNGADSSRSDDEEERRLALEEVKFLQKQRERRSGIPAL 61

Query: 64  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 123
                    T   G  GGG G         ++ G       +S GGEG+K+DLVLQDTFA
Sbjct: 62  --------LTAQKGGGGGGVG---------ARAGSAAKPVEKSEGGEGEKEDLVLQDTFA 121

Query: 124 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSN 183
           QETAVMVEDPNM+KY+EQELAKKRGR +   +  END+K AEDELYKIPEHLKVK+R S+
Sbjct: 122 QETAVMVEDPNMVKYVEQELAKKRGRNINKSDQVENDIKSAEDELYKIPEHLKVKKRTSD 181

Query: 184 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 243
           E STQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+F+IP+S+SADYFHR
Sbjct: 182 EGSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFNIPASYSADYFHR 241

Query: 244 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 303
           GRDYAEKLRR+HPELYK R+ Q+DG+GSKP D   +A GQRQAATDEFMLERFR+RERHR
Sbjct: 242 GRDYAEKLRRDHPELYKDRSSQDDGAGSKPADDNADAPGQRQAATDEFMLERFRRRERHR 287

Query: 304 GMRR 307
           GMRR
Sbjct: 302 GMRR 287

[Close]

BLAST of Cp4.1LG13g06210 vs. TrEMBL
Match: A0A067HFH6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.3e-97
Identity = 206/304 (67.76%), Postives = 240/304 (78.95%), Query Frame = 1


Query: 3   QQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHL  K+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHL--KKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 280

Query: 303 GMRR 307
            MRR
Sbjct: 308 VMRR 280

[Close]

BLAST of Cp4.1LG13g06210 vs. TAIR10
Match: AT1G02330.1 (AT1G02330.1 Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756))

HSP 1 Score: 310.8 bits (795), Expect = 9.1e-85
Identity = 184/306 (60.13%), Postives = 221/306 (72.22%), Query Frame = 1


Query: 7   RKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPALPSVS 66
           ++NFRKR+ ++ E+ ++  N  A    EEEE+ R+ALEEVKFLQK RER+ GIPAL S +
Sbjct: 4   KRNFRKRS-FEEEEEDNDVNKAAIS--EEEEKRRLALEEVKFLQKLRERKLGIPALSSTA 63

Query: 67  MQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFAQETA 126
             +                            G     E    EG+K++LVLQDTFAQETA
Sbjct: 64  QSSI---------------------------GKVKPVEKTETEGEKEELVLQDTFAQETA 123

Query: 127 VMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESST 186
           V++EDPNM+KYIEQELAKKRGR ++  E  EN+LK+ EDELYKIP+HLKVK+R+S ESST
Sbjct: 124 VLIEDPNMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKRSSEESST 183

Query: 187 QWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDY 246
           QWTTGIAEVQLPIE+KLKNIEETEAAKKLLQE+R +GR KSEFSIPSS+SADYF RG+DY
Sbjct: 184 QWTTGIAEVQLPIEYKLKNIEETEAAKKLLQERRLMGRPKSEFSIPSSYSADYFQRGKDY 243

Query: 247 AEKLRREHPELYKGR-NLQEDGSGSKP-----TDTGTEAAGQRQAATDEFMLERFRKRER 306
           AEKLRREHPELYK R   Q DG  +KP     T+   ++   RQAATD+ MLERFRKRER
Sbjct: 244 AEKLRREHPELYKDRGGPQADGEAAKPSTSSSTNNNADSGKSRQAATDQIMLERFRKRER 279

[Close]

BLAST of Cp4.1LG13g06210 vs. NCBI nr
Match: gi|778698558|ref|XP_011654560.1| (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 4.0e-143
Identity = 280/306 (91.50%), Postives = 290/306 (94.77%), Query Frame = 1


Query: 1   MNQQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNCYD+EDG D ANS    SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120
           A+P VS QT+T GA GASGGG GLVRKSTDANSKTGGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  AVPPVSAQTTTAGAGGASGGG-GLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYF 240
           SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS SEFSIPSS+SADYF
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYF 240

Query: 241 HRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER 300
           HRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAATDEFMLERFRKRER
Sbjct: 241 HRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRER 300

Query: 301 HRGMRR 307
           HR MRR
Sbjct: 301 HRVMRR 305

[Close]

BLAST of Cp4.1LG13g06210 vs. NCBI nr
Match: gi|700194617|gb|KGN49794.1| (hypothetical protein Csa_5G129300 [Cucumis sativus])

HSP 1 Score: 509.2 bits (1310), Expect = 4.9e-141
Identity = 279/319 (87.46%), Postives = 290/319 (90.91%), Query Frame = 1


Query: 1   MNQQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNCYD+EDG D ANS    SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGA-------------SGGGGGLVRKSTDANSKTGGGGGSKNESAG 120
           A+P VS QT+T GA GA             + GGGGLVRKSTDANSKTGGGGG+KNESAG
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAG 120

Query: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDEL 180
           GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDEL
Sbjct: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL 180

Query: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKS 240
           YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Sbjct: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS 240

Query: 241 EFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAAT 300
           EFSIPSS+SADYFHRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAAT
Sbjct: 241 EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAAT 300

Query: 301 DEFMLERFRKRERHRGMRR 307
           DEFMLERFRKRERHR MRR
Sbjct: 301 DEFMLERFRKRERHRVMRR 319

[Close]

BLAST of Cp4.1LG13g06210 vs. NCBI nr
Match: gi|659072561|ref|XP_008466165.1| (PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo])

HSP 1 Score: 505.8 bits (1301), Expect = 5.5e-140
Identity = 277/306 (90.52%), Postives = 287/306 (93.79%), Query Frame = 1


Query: 1   MNQQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNCYD+EDG D  NS  T   EEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEGNSV-TAITEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120
           A+P VS Q +T GA GASGGG GLVRKS DANSKTGGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  AVPPVSTQITTAGAGGASGGG-GLVRKSADANSKTGGGGGNKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDLKQAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYF 240
           SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSS+SADYF
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSYSADYF 240

Query: 241 HRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER 300
           HRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAATDEFMLERFRKRER
Sbjct: 241 HRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRER 300

Query: 301 HRGMRR 307
           HR MRR
Sbjct: 301 HRVMRR 304

[Close]

BLAST of Cp4.1LG13g06210 vs. NCBI nr
Match: gi|567904334|ref|XP_006444655.1| (hypothetical protein CICLE_v10021552mg [Citrus clementina])

HSP 1 Score: 372.1 bits (954), Expect = 9.4e-100
Identity = 208/304 (68.42%), Postives = 242/304 (79.61%), Query Frame = 1


Query: 3   QQSKRKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 282

Query: 303 GMRR 307
            MRR
Sbjct: 308 VMRR 282

[Close]

BLAST of Cp4.1LG13g06210 vs. NCBI nr
Match: gi|658015798|ref|XP_008343229.1| (PREDICTED: integrator complex subunit 10-like protein [Malus domestica])

HSP 1 Score: 366.3 bits (939), Expect = 5.2e-98
Identity = 206/306 (67.32%), Postives = 239/306 (78.10%), Query Frame = 1


Query: 7   RKNFRKRNCYDTEDGEDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPALPSVS 66
           +KNFRKR+ +  ED +     T+ + +EEE+E R+ALEEVKFLQKQRER++GIPAL + +
Sbjct: 4   KKNFRKRS-FPAEDNDQDCEKTSAQEDEEEKERRLALEEVKFLQKQRERKSGIPALTNNN 63

Query: 67  MQTSTTGASGASGGGGGLVRKSTDANSKTGGG------GGSKNESAGGEGDKDDLVLQDT 126
             T T   S  +         S + N    G         + N   GG+GDKDDLVLQDT
Sbjct: 64  AATQTLPGSTNNNNSNSNNNASFNKNKNKRGSDDTHSPSNNNNGEGGGDGDKDDLVLQDT 123

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLKQAEDELYKIPEHLKVKRRN 186
           FAQETAVM EDPNMLKY+EQELAKKRG+ ++T +  ENDLK+AEDELYKIP+HLKVKRRN
Sbjct: 124 FAQETAVMAEDPNMLKYVEQELAKKRGKKIDTSDQVENDLKRAEDELYKIPDHLKVKRRN 183

Query: 187 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYF 246
           S ESSTQWTTGIAEVQLPIE+KL+NIEETEAAKK LQEKR  GR+KSEFSIPSS+SADYF
Sbjct: 184 SEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKFLQEKRLTGRTKSEFSIPSSYSADYF 243

Query: 247 HRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER 306
            RGRDYAEKLRREHPELYK ++ Q+DG  S+  DTGTEAAGQRQAATD+FMLERFRKRER
Sbjct: 244 QRGRDYAEKLRREHPELYKDKSSQDDGGVSRQNDTGTEAAGQRQAATDQFMLERFRKRER 303

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g06210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CI078_HUMAN	4.2e-15	33.76	Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1	[more]
CI078_MOUSE	5.5e-15	33.12	Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2	[more]
CI078_PONAB	2.1e-14	33.44	Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1	[more]

BLAST of Cp4.1LG13g06210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLP5_CUCSA	3.4e-141	87.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1	[more]
V4U1H6_9ROSI	6.6e-100	68.42	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1	[more]
A0A067H423_CITSI	6.6e-100	68.42	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1	[more]
A0A059DCY5_EUCGR	4.7e-98	67.76	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00989 PE=4 SV=1	[more]
A0A067HFH6_CITSI	2.3e-97	67.76	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1	[more]

BLAST of Cp4.1LG13g06210 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02330.1	9.1e-85	60.13	Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756)	[more]

BLAST of Cp4.1LG13g06210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778698558\|ref\|XP_011654560.1\|	4.0e-143	91.50	PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus]	[more]
gi\|700194617\|gb\|KGN49794.1\|	4.9e-141	87.46	hypothetical protein Csa_5G129300 [Cucumis sativus]	[more]
gi\|659072561\|ref\|XP_008466165.1\|	5.5e-140	90.52	PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo]	[more]
gi\|567904334\|ref\|XP_006444655.1\|	9.4e-100	68.42	hypothetical protein CICLE_v10021552mg [Citrus clementina]	[more]
gi\|658015798\|ref\|XP_008343229.1\|	5.2e-98	67.32	PREDICTED: integrator complex subunit 10-like protein [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010756	Tls1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0080022	primary root development
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0055121	response to high fluence blue light stimulus by blue high-fluence system
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g06210.1	Cp4.1LG13g06210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010756	Hepatocellular carcinoma-associated antigen 59	PANTHER	PTHR13486	FAMILY NOT NAMED	coord: 6..304 score: 1.2E
IPR010756	Hepatocellular carcinoma-associated antigen 59	PFAM	PF07052	Hep_59	coord: 120..215 score: 2.4
None	No IPR available	unknown	Coil	Coil	coord: 32..52 score: -coord: 199..219 score: -coord: 146..166 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g06210	Cucsa.374290	Cucumber (Gy14) v1	cgycpeB0986
Cp4.1LG13g06210	CmaCh15G008530	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g06210	CmaCh04G021820	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g06210	CmoCh04G022820	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g06210	CmoCh15G008850	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g06210	Cla005867	Watermelon (97103) v1	cpewmB184
Cp4.1LG13g06210	Csa5G129300	Cucumber (Chinese Long) v2	cpecuB178
Cp4.1LG13g06210	MELO3C005183	Melon (DHL92) v3.5.1	cpemeB157
Cp4.1LG13g06210	ClCG01G007260	Watermelon (Charleston Gray)	cpewcgB166
Cp4.1LG13g06210	CSPI05G02510	Wild cucumber (PI 183967)	cpecpiB180
Cp4.1LG13g06210	Lsi09G007730	Bottle gourd (USVL1VR-Ls)	cpelsiB130
Cp4.1LG13g06210	MELO3C005183.2	Melon (DHL92) v3.6.1	cpemedB184
Cp4.1LG13g06210	CsaV3_5G018690	Cucumber (Chinese Long) v3	cpecucB0213
Cp4.1LG13g06210	CsGy5G012580	Cucumber (Gy14) v2	cgybcpeB601
Cp4.1LG13g06210	Carg17718	Silver-seed gourd	carcpeB0669
Cp4.1LG13g06210	Carg01353	Silver-seed gourd	carcpeB1157

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g06210	Cp4.1LG01g18780	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g06210	Wax gourd	cpewgoB0220