CmoCh15G008850 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G008850
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHepatocellular carcinoma-associated antigen 59
LocationCmo_Chr15 : 4482038 .. 4484038 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGTGTAAGCGTTTGGAGAGTCGGGACTTTATTGGATCATTGGATTCAGATTACAATTTCAGAAAGCAAGAAACTAGGGTTTTTTCTCCGGCGGGGATTTGATGAATCAACAGTCGAAAAGGAAGAATTTCCGGAAAAGGAATTGTTGCGATACAGAAGATGGAGGAGATGGGGCGAATTCCACTGCCACCAAATCGGAGGAGGAAGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTTTGCAGAAACAGAGGGAGAGGAGGGCTGGAATTCCTGCACTTCCATCTGTATCGATGCAGACCAGCACCACCGGTGCTAGCGGCGCCAGCGGCGGCGGCGGTGGTCTTGTTAGGAAATCCACTGACGCTAACAGTAAAACTGGTGGCGGCGGGGGCAGTAAGAATGAAAGCGCGGGAGGCGAAGGCGACAAGGATGATTTGGTTCTTCAGGATACCTTCGCTCAGGAAACGGCCGTCATGGTTGAAGATCCTAATATGTATTATTCCCCTTAATTATGTCGTTTCTCAACAAATATATCTATTTGATTAAAAGTGGAGCTCTGACGGGTTCTCTTAACAGGTTGAAGTACATCGAACAGGAACTGGCAAAGAAAAGGGGGAGAACTCTCGAGACTGTAGAAGGTGCTGAGAATGACTTGAACCAGGCGGAAGATGAACTATACAAAATCCCGGAGCATCTTAAAGTGAGTGAGTAGCCAATGTAGTGTTCTTGTCTCTTCTTTCGCAGTTCGTCTGTTCAGTTCTATTCGGCTGAGTGCTGCATTAGGCTTTTGTTCGTGTATTCTGGGATTTGATTTCACTTGCCATTTTTGGACTGTTGTCAGGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTGCCAATTGAGTATGTCCTTTCTCCTCCTTTGTGAAAGAACTTCATTAATTTCTGCCAGTGATCATCACTTTTGTGTACTTTCTGTGAATTATGAGCAATGAAGATCAAGCAGGAGATTAAATGGAATCATACTGATCCAATTACTATTTTGTATTGTAACACAGAAATTAAGTTTTACTTTGGAGCATTTGATTCCTTGGTTAAATAATTTGAAGTGCCGTATAAAATTAAGCATCTGTCATAATTGTGTTGGATGTGGGTATTTTCCACTGACATTTATGAAGTGTGTTCAACTGCTCGTTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCTTTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAAGAGGTGCTTCATTTCTTTATATTGTTTATCCTTTGGGATGATGTTGTTCTACTATTTACTCTCGACGTGAGCTTAAGTTTTGGTGATCACGTACCTAAGATTTTAGTTTCATACAAATTTTCTGCATACCAAATATGCGTGCCTATTATCTAAATTCTACACATGGGTAGTTGGATTGTTAGATCATAAACTAAACGCCCTGATATCAGGAGAAAGGGAGGAAAATATACTCCTAAAATTTATTAGATGTTATATTAATTCTGACAAGGAATAAAAAATATGCAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGTATGCGGAGGTAACATATTTCTCGGACTGCTGTTTCTCCAGAATAGGAAGTGAGCTACTTGATAAGTTAAGCATCAAGGATAAAGGTTTTGGTCGTACAAATATTCTTTCACATCATGATGGCCATCTCAGGACCTCAGGTTAGAGAGGAAATGAAATCCATTCTTAGTTCATAG

mRNA sequence

AATTGTGTAAGCGTTTGGAGAGTCGGGACTTTATTGGATCATTGGATTCAGATTACAATTTCAGAAAGCAAGAAACTAGGGTTTTTTCTCCGGCGGGGATTTGATGAATCAACAGTCGAAAAGGAAGAATTTCCGGAAAAGGAATTGTTGCGATACAGAAGATGGAGGAGATGGGGCGAATTCCACTGCCACCAAATCGGAGGAGGAAGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTTTGCAGAAACAGAGGGAGAGGAGGGCTGGAATTCCTGCACTTCCATCTGTATCGATGCAGACCAGCACCACCGGTGCTAGCGGCGCCAGCGGCGGCGGCGGTGGTCTTGTTAGGAAATCCACTGACGCTAACAGTAAAACTGGTGGCGGCGGGGGCAGTAAGAATGAAAGCGCGGGAGGCGAAGGCGACAAGGATGATTTGGTTCTTCAGGATACCTTCGCTCAGGAAACGGCCGTCATGGTTGAAGATCCTAATATGTTGAAGTACATCGAACAGGAACTGGCAAAGAAAAGGGGGAGAACTCTCGAGACTGTAGAAGGTGCTGAGAATGACTTGAACCAGGCGGAAGATGAACTATACAAAATCCCGGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTGCCAATTGAATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCTTTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGACCTCAGGTTAGAGAGGAAATGAAATCCATTCTTAGTTCATAG

Coding sequence (CDS)

ATGAATCAACAGTCGAAAAGGAAGAATTTCCGGAAAAGGAATTGTTGCGATACAGAAGATGGAGGAGATGGGGCGAATTCCACTGCCACCAAATCGGAGGAGGAAGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTTTGCAGAAACAGAGGGAGAGGAGGGCTGGAATTCCTGCACTTCCATCTGTATCGATGCAGACCAGCACCACCGGTGCTAGCGGCGCCAGCGGCGGCGGCGGTGGTCTTGTTAGGAAATCCACTGACGCTAACAGTAAAACTGGTGGCGGCGGGGGCAGTAAGAATGAAAGCGCGGGAGGCGAAGGCGACAAGGATGATTTGGTTCTTCAGGATACCTTCGCTCAGGAAACGGCCGTCATGGTTGAAGATCCTAATATGTTGAAGTACATCGAACAGGAACTGGCAAAGAAAAGGGGGAGAACTCTCGAGACTGTAGAAGGTGCTGAGAATGACTTGAACCAGGCGGAAGATGAACTATACAAAATCCCGGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTGCCAATTGAATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCTTTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGACCTCAGGTTAGAGAGGAAATGAAATCCATTCTTAGTTCATAG
Homology
[Close]
BLAST of CmoCh15G008850 vs. Swiss-Prot
Match: CI078_MOUSE (Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-15
Identity = 99/308 (32.14%), Postives = 149/308 (48.38%), Query Frame = 1 

Query: 8   KNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPA---LPS 67
           K FR+R           A+S + + E+E EE R+ LEE + +Q  R+R  G+ A   L  
Sbjct: 6   KTFRRRR----------ADSESEEDEQESEEVRLKLEETREVQNLRKRPNGVSAAALLVG 65

Query: 68  VSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGE---GDKDDLVLQDTF 127
             +Q  TT           LV         TGG    K     G+    +++DL L  +F
Sbjct: 66  EKVQEETT-----------LV--DDPFQMATGGMVDMKKLKERGKDKVSEEEDLHLGTSF 125

Query: 128 AQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNS 187
           + ET    ED +M+KYIE EL K++G   +  + A+     AED LY++PE+++V     
Sbjct: 126 SAETNRRDEDADMMKYIETELKKRKGIVEQEEQKAKP--KNAEDCLYELPENIRVSSAKK 185

Query: 188 NES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFSIPSSFSAD 247
            E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +      +P++ + +
Sbjct: 186 TEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNMAVN 245

Query: 248 YFHRGRDYAEKLR---REHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQA---ATDEFML 301
           Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD++  
Sbjct: 246 YVQHNRFYHEELNAPIRRNKEEPKARPLRV-GDTEKPEPERSPPNRKRPANEKATDDYHY 287

[Close]
BLAST of CmoCh15G008850 vs. Swiss-Prot
Match: CI078_HUMAN (Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-15
Identity = 103/311 (33.12%), Postives = 151/311 (48.55%), Query Frame = 1 

Query: 7   RKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPA---LP 66
           RK FR+R        GD   S + + E++ EE R+ LEE + +Q  R+R  G+ A   L 
Sbjct: 5   RKIFRRRR-------GD---SESEEDEQDSEEVRLKLEETREVQNLRKRPNGVSAVALLV 64

Query: 67  SVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGE---GDKDDLVLQDT 126
              +Q  TT           LV        KTGG    K     G+    +++DL L  +
Sbjct: 65  GEKVQEETT-----------LV--DDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTS 124

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDL--NQAEDELYKIPEHLKVKR 186
           F+ ET    ED +M+KYIE EL K++G     VE  E  +    AED LY++PE+++V  
Sbjct: 125 FSAETNRRDEDADMMKYIETELKKRKG----IVEHEEQKVKPKNAEDCLYELPENIRVSS 184

Query: 187 RNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFSIPSSF 246
               E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +      +P++ 
Sbjct: 185 AKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNM 244

Query: 247 SADYFHRGRDYAEKLR---REHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQA---ATDE 301
           + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD+
Sbjct: 245 AVNYVQHNRFYHEELNAPIRRNKEEPKARPLRV-GDTEKPEPERSPPNRKRPANEKATDD 287

[Close]
BLAST of CmoCh15G008850 vs. Swiss-Prot
Match: CI078_PONAB (Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 102/311 (32.80%), Postives = 150/311 (48.23%), Query Frame = 1 

Query: 7   RKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPA---LP 66
           RK FR+R        GD   S + + E++ EE R+ LEE + +Q  R+R  G+ A   L 
Sbjct: 5   RKIFRRRR-------GD---SESEEDEQDSEEVRLKLEETREVQNLRKRPNGVSAVALLV 64

Query: 67  SVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGE---GDKDDLVLQDT 126
              +Q  TT           LV        KTGG    K     G+    +++DL L  +
Sbjct: 65  GEKVQEETT-----------LV--DDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTS 124

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDL--NQAEDELYKIPEHLKVKR 186
           F+ ET    ED +M+KYIE EL K++G     VE  E  +    AED LY++PE+++V  
Sbjct: 125 FSAETNRRDEDADMMKYIETELKKRKG----IVEHEEQKVKPKNAEDCLYELPENIRVSS 184

Query: 187 RNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFSIPSSF 246
               E   S Q  +GI EV   I+ K+KNI  TE AK +LL E++   +      +P++ 
Sbjct: 185 AKKTEEMLSNQMLSGIPEVDQGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNM 244

Query: 247 SADYFHRGRDYAEKLR---REHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQA---ATDE 301
           + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD+
Sbjct: 245 AVNYVQHNRFYHEELNAPIRRNKEEPKARPLRV-GDTEKPEPERSPPNRKRPANEKATDD 287

[Close]
BLAST of CmoCh15G008850 vs. TrEMBL
Match: A0A0A0KLP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 3.0e-140
Identity = 275/315 (87.30%), Postives = 286/315 (90.79%), Query Frame = 1 

Query: 1   MNQQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNC D+EDGGD ANS    SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGA-------------SGGGGGLVRKSTDANSKTGGGGGSKNESAG 120
           A+P VS QT+T GA GA             + GGGGLVRKSTDANSKTGGGGG+KNESAG
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAG 120

Query: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDEL 180
           GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDL QAEDEL
Sbjct: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL 180

Query: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKS 240
           YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Sbjct: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS 240

Query: 241 EFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAAT 300
           EFSIPSS+SADYFHRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAAT
Sbjct: 241 EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAAT 300

Query: 301 DEFMLERFRKRERHR 303
           DEFMLERFRKRERHR
Sbjct: 301 DEFMLERFRKRERHR 315

[Close]
BLAST of CmoCh15G008850 vs. TrEMBL
Match: A0A067H423_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.8e-99
Identity = 204/300 (68.00%), Postives = 238/300 (79.33%), Query Frame = 1 

Query: 3   QQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDL  AEDELYKIPEHLKVK+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 278

[Close]
BLAST of CmoCh15G008850 vs. TrEMBL
Match: V4U1H6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.8e-99
Identity = 204/300 (68.00%), Postives = 238/300 (79.33%), Query Frame = 1 

Query: 3   QQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDL  AEDELYKIPEHLKVK+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 278

[Close]
BLAST of CmoCh15G008850 vs. TrEMBL
Match: A0A059DCY5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00989 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.5e-96
Identity = 198/300 (66.00%), Postives = 232/300 (77.33%), Query Frame = 1 

Query: 4   QSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPALP 63
           Q ++KNFRKR+  + E      N   +   ++EEE R+ALEEVKFLQKQRERR+GIPAL 
Sbjct: 2   QQRKKNFRKRSFQEDEGEAGAGNGADSSRSDDEEERRLALEEVKFLQKQRERRSGIPAL- 61

Query: 64  SVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFAQ 123
                   T   G  GGG G         ++ G       +S GGEG+K+DLVLQDTFAQ
Sbjct: 62  -------LTAQKGGGGGGVG---------ARAGSAAKPVEKSEGGEGEKEDLVLQDTFAQ 121

Query: 124 ETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNSNE 183
           ETAVMVEDPNM+KY+EQELAKKRGR +   +  END+  AEDELYKIPEHLKVK+R S+E
Sbjct: 122 ETAVMVEDPNMVKYVEQELAKKRGRNINKSDQVENDIKSAEDELYKIPEHLKVKKRTSDE 181

Query: 184 SSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRG 243
            STQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+F+IP+S+SADYFHRG
Sbjct: 182 GSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFNIPASYSADYFHRG 241

Query: 244 RDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHRG 303
           RDYAEKLRR+HPELYK R+ Q+DG+GSKP D   +A GQRQAATDEFMLERFR+RERHRG
Sbjct: 242 RDYAEKLRRDHPELYKDRSSQDDGAGSKPADDNADAPGQRQAATDEFMLERFRRRERHRG 284

[Close]
BLAST of CmoCh15G008850 vs. TrEMBL
Match: A0A067HFH6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.5e-96
Identity = 202/300 (67.33%), Postives = 236/300 (78.67%), Query Frame = 1 

Query: 3   QQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDL  AEDELYKIPEHL  K+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHL--KKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 276

[Close]
BLAST of CmoCh15G008850 vs. TAIR10
Match: AT1G02330.1 (AT1G02330.1 Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756))

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83
Identity = 181/302 (59.93%), Postives = 215/302 (71.19%), Query Frame = 1 

Query: 7   RKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPALPSVS 66
           ++NFRKR+  + E+  D  N  A    EEEE+ R+ALEEVKFLQK RER+ GIPAL S +
Sbjct: 4   KRNFRKRSFEEEEEDND-VNKAAIS--EEEEKRRLALEEVKFLQKLRERKLGIPALSSTA 63

Query: 67  MQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFAQETA 126
             +                            G     E    EG+K++LVLQDTFAQETA
Sbjct: 64  QSSI---------------------------GKVKPVEKTETEGEKEELVLQDTFAQETA 123

Query: 127 VMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNSNESST 186
           V++EDPNM+KYIEQELAKKRGR ++  E  EN+L + EDELYKIP+HLKVK+R+S ESST
Sbjct: 124 VLIEDPNMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKRSSEESST 183

Query: 187 QWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDY 246
           QWTTGIAEVQLPIE+KLKNIEETEAAKKLLQE+R +GR KSEFSIPSS+SADYF RG+DY
Sbjct: 184 QWTTGIAEVQLPIEYKLKNIEETEAAKKLLQERRLMGRPKSEFSIPSSYSADYFQRGKDY 243

Query: 247 AEKLRREHPELYKGR-NLQEDGSGSKP-----TDTGTEAAGQRQAATDEFMLERFRKRER 303
           AEKLRREHPELYK R   Q DG  +KP     T+   ++   RQAATD+ MLERFRKRER
Sbjct: 244 AEKLRREHPELYKDRGGPQADGEAAKPSTSSSTNNNADSGKSRQAATDQIMLERFRKRER 275

[Close]
BLAST of CmoCh15G008850 vs. NCBI nr
Match: gi|778698558|ref|XP_011654560.1| (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 4.6e-142
Identity = 276/302 (91.39%), Postives = 286/302 (94.70%), Query Frame = 1 

Query: 1   MNQQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNC D+EDGGD ANS    SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120
           A+P VS QT+T GA GASGGG GLVRKSTDANSKTGGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  AVPPVSAQTTTAGAGGASGGG-GLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDL QAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYF 240
           SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS SEFSIPSS+SADYF
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYF 240

Query: 241 HRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER 300
           HRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAATDEFMLERFRKRER
Sbjct: 241 HRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRER 300

Query: 301 HR 303
           HR
Sbjct: 301 HR 301

[Close]
BLAST of CmoCh15G008850 vs. NCBI nr
Match: gi|700194617|gb|KGN49794.1| (hypothetical protein Csa_5G129300 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 4.3e-140
Identity = 275/315 (87.30%), Postives = 286/315 (90.79%), Query Frame = 1 

Query: 1   MNQQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNC D+EDGGD ANS    SEEEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGA-------------SGGGGGLVRKSTDANSKTGGGGGSKNESAG 120
           A+P VS QT+T GA GA             + GGGGLVRKSTDANSKTGGGGG+KNESAG
Sbjct: 61  AVPPVSAQTTTAGAGGAPARPDPPPAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAG 120

Query: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDEL 180
           GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDL QAEDEL
Sbjct: 121 GEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDEL 180

Query: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKS 240
           YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Sbjct: 181 YKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS 240

Query: 241 EFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAAT 300
           EFSIPSS+SADYFHRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAAT
Sbjct: 241 EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAAT 300

Query: 301 DEFMLERFRKRERHR 303
           DEFMLERFRKRERHR
Sbjct: 301 DEFMLERFRKRERHR 315

[Close]
BLAST of CmoCh15G008850 vs. NCBI nr
Match: gi|659072561|ref|XP_008466165.1| (PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo])

HSP 1 Score: 502.7 bits (1293), Expect = 4.8e-139
Identity = 273/302 (90.40%), Postives = 283/302 (93.71%), Query Frame = 1 

Query: 1   MNQQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIP 60
           MNQ SK+KNFRKRNC D+EDGGD  NS  T   EEEEEHRMALEEVKFLQKQRERRAGIP
Sbjct: 1   MNQPSKKKNFRKRNCYDSEDGGDEGNSV-TAITEEEEEHRMALEEVKFLQKQRERRAGIP 60

Query: 61  ALPSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDT 120
           A+P VS Q +T GA GASGGG GLVRKS DANSKTGGGGG+KNESAGGEGDKDDLVLQDT
Sbjct: 61  AVPPVSTQITTAGAGGASGGG-GLVRKSADANSKTGGGGGNKNESAGGEGDKDDLVLQDT 120

Query: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRN 180
           FAQETAVMVEDPNMLKYIEQELAKKRGRT+ETVEGAENDL QAEDELYKIPEHLKVKRRN
Sbjct: 121 FAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRN 180

Query: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYF 240
           SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSS+SADYF
Sbjct: 181 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSYSADYF 240

Query: 241 HRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER 300
           HRGRDYAEKLRREHPELYK R+LQ+DGSGSKP +TGTEAAGQRQAATDEFMLERFRKRER
Sbjct: 241 HRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRER 300

Query: 301 HR 303
           HR
Sbjct: 301 HR 300

[Close]
BLAST of CmoCh15G008850 vs. NCBI nr
Match: gi|567904334|ref|XP_006444655.1| (hypothetical protein CICLE_v10021552mg [Citrus clementina])

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98
Identity = 204/300 (68.00%), Postives = 238/300 (79.33%), Query Frame = 1 

Query: 3   QQSKRKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPAL 62
           ++ K+KNFRKR+  + E+       T  K  ++EEE R+ALEE+KFLQKQRER++GIPA+
Sbjct: 8   KKEKKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAI 67

Query: 63  PSVSMQTSTTGASGASGGGGGLVRKSTDANSKTGGGGGSKNESAGGEGDKDDLVLQDTFA 122
           PS          S A+ GGGGL + S             KNE   G+G+KD+LVLQDTFA
Sbjct: 68  PSALQ-------SAAAAGGGGLTKVS------------EKNE---GDGEKDELVLQDTFA 127

Query: 123 QETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRNSN 182
           QETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDL  AEDELYKIPEHLKVK+RNS 
Sbjct: 128 QETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSE 187

Query: 183 ESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHR 242
           ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+KS+FSIPSS+SADYF R
Sbjct: 188 ESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQR 247

Query: 243 GRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRERHR 302
           GRDYAEKLRREHPELYK R  Q+DG+GS+PTD  T+AAG RQAATD+FMLERFRKRERHR
Sbjct: 248 GRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHR 278

[Close]
BLAST of CmoCh15G008850 vs. NCBI nr
Match: gi|658015798|ref|XP_008343229.1| (PREDICTED: integrator complex subunit 10-like protein [Malus domestica])

HSP 1 Score: 360.1 bits (923), Expect = 3.8e-96
Identity = 202/302 (66.89%), Postives = 233/302 (77.15%), Query Frame = 1 

Query: 7   RKNFRKRNCCDTEDGGDGANSTATKSEEEEEEHRMALEEVKFLQKQRERRAGIPALPSVS 66
           +KNFRKR+    ED       T+ + +EEE+E R+ALEEVKFLQKQRER++GIPAL + +
Sbjct: 4   KKNFRKRSF-PAEDNDQDCEKTSAQEDEEEKERRLALEEVKFLQKQRERKSGIPALTNNN 63

Query: 67  MQTSTTGASGASGGGGGLVRKSTDANSKTGGG------GGSKNESAGGEGDKDDLVLQDT 126
             T T   S  +         S + N    G         + N   GG+GDKDDLVLQDT
Sbjct: 64  AATQTLPGSTNNNNSNSNNNASFNKNKNKRGSDDTHSPSNNNNGEGGGDGDKDDLVLQDT 123

Query: 127 FAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQAEDELYKIPEHLKVKRRN 186
           FAQETAVM EDPNMLKY+EQELAKKRG+ ++T +  ENDL +AEDELYKIP+HLKVKRRN
Sbjct: 124 FAQETAVMAEDPNMLKYVEQELAKKRGKKIDTSDQVENDLKRAEDELYKIPDHLKVKRRN 183

Query: 187 SNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYF 246
           S ESSTQWTTGIAEVQLPIE+KL+NIEETEAAKK LQEKR  GR+KSEFSIPSS+SADYF
Sbjct: 184 SEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKFLQEKRLTGRTKSEFSIPSSYSADYF 243

Query: 247 HRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER 303
            RGRDYAEKLRREHPELYK ++ Q+DG  S+  DTGTEAAGQRQAATD+FMLERFRKRER
Sbjct: 244 QRGRDYAEKLRREHPELYKDKSSQDDGGVSRQNDTGTEAAGQRQAATDQFMLERFRKRER 303

The following BLAST results are available for this feature:
BLAST of CmoCh15G008850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CI078_MOUSE2.5e-1532.14Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2[more]
CI078_HUMAN3.3e-1533.12Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1[more]
CI078_PONAB1.6e-1432.80Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1[more]
BLAST of CmoCh15G008850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLP5_CUCSA3.0e-14087.30Uncharacterized protein OS=Cucumis sativus GN=Csa_5G129300 PE=4 SV=1[more]
A0A067H423_CITSI9.8e-9968.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1[more]
V4U1H6_9ROSI9.8e-9968.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021552mg PE=4 SV=1[more]
A0A059DCY5_EUCGR3.5e-9666.00Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00989 PE=4 SV=1[more]
A0A067HFH6_CITSI3.5e-9667.33Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023468mg PE=4 SV=1[more]
BLAST of CmoCh15G008850 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02330.11.8e-8359.93 Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756)[more]
BLAST of CmoCh15G008850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698558|ref|XP_011654560.1|4.6e-14291.39PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis sativus][more]
gi|700194617|gb|KGN49794.1|4.3e-14087.30hypothetical protein Csa_5G129300 [Cucumis sativus][more]
gi|659072561|ref|XP_008466165.1|4.8e-13990.40PREDICTED: uncharacterized protein LOC103503658 [Cucumis melo][more]
gi|567904334|ref|XP_006444655.1|1.4e-9868.00hypothetical protein CICLE_v10021552mg [Citrus clementina][more]
gi|658015798|ref|XP_008343229.1|3.8e-9666.89PREDICTED: integrator complex subunit 10-like protein [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010756Tls1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0080022 primary root development
biological_process GO:0010099 regulation of photomorphogenesis
biological_process GO:0055121 response to high fluence blue light stimulus by blue high-fluence system
cellular_component GO:0005575 cellular_component
cellular_component GO:0016607 nuclear speck
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G008850.1CmoCh15G008850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010756Hepatocellular carcinoma-associated antigen 59PANTHERPTHR13486FAMILY NOT NAMEDcoord: 6..304
score: 1.7E
IPR010756Hepatocellular carcinoma-associated antigen 59PFAMPF07052Hep_59coord: 120..215
score: 2.2
NoneNo IPR availableunknownCoilCoilcoord: 146..166
score: -coord: 199..219
score: -coord: 32..52
scor
NoneNo IPR availablePANTHERPTHR13486:SF2NOVEL PROTEIN (ZGC:103692)coord: 6..304
score: 1.7E