Carg17718 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGGGCTTTCTTCCGGTGGGATTAGATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAGAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTAGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTAATATTCTCCTTAATTGTATCGTTCTCAACGAATTTTTTTTATTTGATGGATTATATTCTAGGAATTGAGGTGGGGGGTGTTTTTATATGTTTAAAATTGGGGGTTTGATGAGTTCTCATAATAGGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAGTGAGTAGTCAATCTAGTGTTCTTAGCGTTCTTGTTTCACATCTTTCAGTTCTTCTGTTCATTGCTATTTCACTGAGTGCTGCATTTGATTTTTGTTAGAATGATCGAAGCTAGTATTTAGATTCATCCGGTTTGTATATTCTGGGACTTGTTTATGCTTATCATTTTTTGGATTTTGTCAGGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGTCCTTCCCCTCCTTTTTGAAAGAGTTTAATTCACACATCCCAACGATGTTCGCTTCTTAATACTTTCTGTGAACTGGGGTAATCAAAAGCAGGAACAAAAGTGGAACGAAACCAATTACTTAGAGATTAAGCTTTACTTGGCAATTACTTAGAGATTAAGCTTTACTTGGTAGCTTATGATACTTTTATTGATCATTAGTTATCATCCATGTTAAGAATATTTAGCCTTGAATTATGGTTTAACATATGTATCATATTTGACCCTTTATTATAGACAAAGATGTTGTACGATTGAGGATATTTAGCCTTCCATTACGGTTTATCAGAGGTATCATATTTGACCTTTTATAGGCAACTATCTTGTATCCACTTATTTCTCTTTCCATTTCCTTTGTACTTTATTTGGTTCCGTAAATGATTATAAGTAGAGAACTTTCACCACCGTTTAGGTGTGGTGGTTTTAGCAAATATTCTCAATCCACATGAGTATATTTCATATTTGCATTTGGTGAGGATATTTTCCTCTGACCTTTGTGTGGTCATTATCTCTATTTGAACAGATTCAAGTTGAAGAACATTGAGGAGACCGAGGCTGCAAAAAAGCTTTTGCAGGAAAAGAGATTTGTCGGTCGTTCAAAATCCGAGTTTAGCATCCCATCTAGTTATAGTGCCGATTACTTCCACCGTGGCAGGGATTATGCTGAAAAACTTAGAAGAGGTGCCTCGCCTCTTTATATTACTTCACCTTTTGGGATGATATTGCACTGTTATTTACCCGGATCTGATTTAAAATTTTGGTGATAACCTTCCTATGATGATAGTTTCTTACAAATTTTCTGCATTTCAAATGTTAGAGTATGTTAAAGTCTGGTGGTACTCTGTTGATGTTACTATGATCTAAATTCTAGATATTTGTTGGATTGTTCAATCATTAAACCAAGAACCCTTGTATCCGGAGAAAGGGATGAACATATAATCGTGTGTTAATTAGATATTTTACTGTTCTGACGATGAATAGAAAAATATGCAGAACATCCTGAGCTGTACAAGAATAGAAATTTGCAAGATGATGGTTCAGGCTCCAAACCAACTGATAGTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCAACCGATGAGTTCATGCTAGAACGCTTCCGGAAACGTGAACGCCATCGTGTGATGCGAAGATAACACACCCATCAGGCTGCTATTTCTCCACAATTGGAGGTAACGTACTCGATTAAAGAAGTATCAAGGATAAAGATTTCTGTCCTCGAAAGCATCATGGGGTCATCTCAGGACCTTGGGTTATAGCGAACAACGACTTAGATCGTCGATTGATTTGTCATTCATAGTTTATCGTGGTAAAGTCGGCCGATTGAATTATAATCCAAATATACTTTTGGATATACTGATATTGATGATGTGGTTTGCCTCTATCTGGCCTATCTATTTGTATCTTAATCTAGCCTCTGCATTTGCAGTTACATTTATCAGTTTTCTTGTACTTAGCCAAGTGCAGAGCTACCCAAAGTGCAAAGTGAATGGAAAAAATAATCCTTTTAGGTGACACTGAGATAGAAAACATGAAAC TAGGGCTTTCTTCCGGTGGGATTAGATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAGAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTAGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAGACCGAGGCTGCAAAAAAGCTTTTGCAGGAAAAGAGATTTGTCGGTCGTTCAAAATCCGAGTTTAGCATCCCATCTAGTTATAGTGCCGATTACTTCCACCGTGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTGTACAAGAATAGAAATTTGCAAGATGATGGTTCAGGCTCCAAACCAACTGATAGTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCAACCGATGAGTTCATGCTAGAACGCTTCCGGAAACGTGAACGCCATCGTGTGATGCGAAGATAACACACCCATCAGGCTGCTATTTCTCCACAATTGGAGGTAACGTACTCGATTAAAGAAGTATCAAGGATAAAGATTTCTGTCCTCGAAAGCATCATGGGGTCATCTCAGGACCTTGGGTTATAGCGAACAACGACTTAGATCGTCGATTGATTTGTCATTCATAGTTTATCGTGGTAAAGTCGGCCGATTGAATTATAATCCAAATATACTTTTGGATATACTGATATTGATGATGTGGTTTGCCTCTATCTGGCCTATCTATTTGTATCTTAATCTAGCCTCTGCATTTGCAGTTACATTTATCAGTTTTCTTGTACTTAGCCAAGTGCAGAGCTACCCAAAGTGCAAAGTGAATGGAAAAAATAATCCTTTTAGGTGACACTGAGATAGAAAACATGAAAC ATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAGAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTAGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAGACCGAGGCTGCAAAAAAGCTTTTGCAGGAAAAGAGATTTGTCGGTCGTTCAAAATCCGAGTTTAGCATCCCATCTAGTTATAGTGCCGATTACTTCCACCGTGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTGTACAAGAATAGAAATTTGCAAGATGATGGTTCAGGCTCCAAACCAACTGATAGTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCAACCGATGAGTTCATGCTAGAACGCTTCCGGAAACGTGAACGCCATCGTGTGATGCGAAGATAA MNQPSKKKNFRRRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDANSNIGGGGGGGNKNEGAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQAATDEFMLERFRKRERHRVMRR
BLAST of Carg17718 vs. NCBI nr
Match: XP_022922521.1 (protein COP1 SUPPRESSOR 2-like [Cucurbita moschata] >XP_022922530.1 protein COP1 SUPPRESSOR 2-like [Cucurbita moschata]) HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Carg17718 vs. NCBI nr
Match: XP_022990156.1 (protein COP1 SUPPRESSOR 2-like [Cucurbita maxima] >XP_022990157.1 protein COP1 SUPPRESSOR 2-like [Cucurbita maxima]) HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121 Identity = 254/262 (96.95%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of Carg17718 vs. NCBI nr
Match: XP_022938620.1 (protein COP1 SUPPRESSOR 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 364.8 bits (935), Expect = 2.9e-97 Identity = 222/263 (84.41%), Postives = 226/263 (85.93%), Query Frame = 0
BLAST of Carg17718 vs. NCBI nr
Match: XP_008466165.1 (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis melo]) HSP 1 Score: 360.1 bits (923), Expect = 7.1e-96 Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of Carg17718 vs. NCBI nr
Match: XP_022146355.1 (uncharacterized protein C9orf78 homolog [Momordica charantia]) HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95 Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of Carg17718 vs. TAIR10
Match: AT1G02330.1 (Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756)) HSP 1 Score: 295.0 bits (754), Expect = 5.1e-80 Identity = 168/267 (62.92%), Postives = 198/267 (74.16%), Query Frame = 0
BLAST of Carg17718 vs. Swiss-Prot
Match: sp|F4HVZ5|CSU2_ARATH (Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 9.2e-79 Identity = 168/267 (62.92%), Postives = 198/267 (74.16%), Query Frame = 0
BLAST of Carg17718 vs. Swiss-Prot
Match: sp|Q3TQI7|TLS1_MOUSE (Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 70/196 (35.71%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of Carg17718 vs. Swiss-Prot
Match: sp|Q9NZ63|TLS1_HUMAN (Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf78 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.6e-14 Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of Carg17718 vs. Swiss-Prot
Match: sp|Q5RC87|TLS1_PONAB (Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13 Identity = 71/196 (36.22%), Postives = 104/196 (53.06%), Query Frame = 0
BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A1S3CQV4|A0A1S3CQV4_CUCME (uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 4.7e-96 Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A0A0KLP5|A0A0A0KLP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.3e-95 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of Carg17718 vs. TrEMBL
Match: tr|V4VX10|V4VX10_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021552mg PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91 Identity = 186/262 (70.99%), Postives = 211/262 (80.53%), Query Frame = 0
BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A061DZN7|A0A061DZN7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_004978 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 7.8e-91 Identity = 188/262 (71.76%), Postives = 208/262 (79.39%), Query Frame = 0
BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A2P5R2J9|A0A2P5R2J9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22050 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 3.9e-90 Identity = 186/262 (70.99%), Postives = 208/262 (79.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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