Carg17718 (gene) Silver-seed gourd

NameCarg17718
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionChromosome 9 open reading frame 78
LocationCucurbita_argyrosperma_scaffold_082 : 127761 .. 130286 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGGCTTTCTTCCGGTGGGATTAGATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAGAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTAGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTAATATTCTCCTTAATTGTATCGTTCTCAACGAATTTTTTTTATTTGATGGATTATATTCTAGGAATTGAGGTGGGGGGTGTTTTTATATGTTTAAAATTGGGGGTTTGATGAGTTCTCATAATAGGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAGTGAGTAGTCAATCTAGTGTTCTTAGCGTTCTTGTTTCACATCTTTCAGTTCTTCTGTTCATTGCTATTTCACTGAGTGCTGCATTTGATTTTTGTTAGAATGATCGAAGCTAGTATTTAGATTCATCCGGTTTGTATATTCTGGGACTTGTTTATGCTTATCATTTTTTGGATTTTGTCAGGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGTCCTTCCCCTCCTTTTTGAAAGAGTTTAATTCACACATCCCAACGATGTTCGCTTCTTAATACTTTCTGTGAACTGGGGTAATCAAAAGCAGGAACAAAAGTGGAACGAAACCAATTACTTAGAGATTAAGCTTTACTTGGCAATTACTTAGAGATTAAGCTTTACTTGGTAGCTTATGATACTTTTATTGATCATTAGTTATCATCCATGTTAAGAATATTTAGCCTTGAATTATGGTTTAACATATGTATCATATTTGACCCTTTATTATAGACAAAGATGTTGTACGATTGAGGATATTTAGCCTTCCATTACGGTTTATCAGAGGTATCATATTTGACCTTTTATAGGCAACTATCTTGTATCCACTTATTTCTCTTTCCATTTCCTTTGTACTTTATTTGGTTCCGTAAATGATTATAAGTAGAGAACTTTCACCACCGTTTAGGTGTGGTGGTTTTAGCAAATATTCTCAATCCACATGAGTATATTTCATATTTGCATTTGGTGAGGATATTTTCCTCTGACCTTTGTGTGGTCATTATCTCTATTTGAACAGATTCAAGTTGAAGAACATTGAGGAGACCGAGGCTGCAAAAAAGCTTTTGCAGGAAAAGAGATTTGTCGGTCGTTCAAAATCCGAGTTTAGCATCCCATCTAGTTATAGTGCCGATTACTTCCACCGTGGCAGGGATTATGCTGAAAAACTTAGAAGAGGTGCCTCGCCTCTTTATATTACTTCACCTTTTGGGATGATATTGCACTGTTATTTACCCGGATCTGATTTAAAATTTTGGTGATAACCTTCCTATGATGATAGTTTCTTACAAATTTTCTGCATTTCAAATGTTAGAGTATGTTAAAGTCTGGTGGTACTCTGTTGATGTTACTATGATCTAAATTCTAGATATTTGTTGGATTGTTCAATCATTAAACCAAGAACCCTTGTATCCGGAGAAAGGGATGAACATATAATCGTGTGTTAATTAGATATTTTACTGTTCTGACGATGAATAGAAAAATATGCAGAACATCCTGAGCTGTACAAGAATAGAAATTTGCAAGATGATGGTTCAGGCTCCAAACCAACTGATAGTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCAACCGATGAGTTCATGCTAGAACGCTTCCGGAAACGTGAACGCCATCGTGTGATGCGAAGATAACACACCCATCAGGCTGCTATTTCTCCACAATTGGAGGTAACGTACTCGATTAAAGAAGTATCAAGGATAAAGATTTCTGTCCTCGAAAGCATCATGGGGTCATCTCAGGACCTTGGGTTATAGCGAACAACGACTTAGATCGTCGATTGATTTGTCATTCATAGTTTATCGTGGTAAAGTCGGCCGATTGAATTATAATCCAAATATACTTTTGGATATACTGATATTGATGATGTGGTTTGCCTCTATCTGGCCTATCTATTTGTATCTTAATCTAGCCTCTGCATTTGCAGTTACATTTATCAGTTTTCTTGTACTTAGCCAAGTGCAGAGCTACCCAAAGTGCAAAGTGAATGGAAAAAATAATCCTTTTAGGTGACACTGAGATAGAAAACATGAAAC

mRNA sequence

TAGGGCTTTCTTCCGGTGGGATTAGATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAGAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTAGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAGACCGAGGCTGCAAAAAAGCTTTTGCAGGAAAAGAGATTTGTCGGTCGTTCAAAATCCGAGTTTAGCATCCCATCTAGTTATAGTGCCGATTACTTCCACCGTGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTGTACAAGAATAGAAATTTGCAAGATGATGGTTCAGGCTCCAAACCAACTGATAGTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCAACCGATGAGTTCATGCTAGAACGCTTCCGGAAACGTGAACGCCATCGTGTGATGCGAAGATAACACACCCATCAGGCTGCTATTTCTCCACAATTGGAGGTAACGTACTCGATTAAAGAAGTATCAAGGATAAAGATTTCTGTCCTCGAAAGCATCATGGGGTCATCTCAGGACCTTGGGTTATAGCGAACAACGACTTAGATCGTCGATTGATTTGTCATTCATAGTTTATCGTGGTAAAGTCGGCCGATTGAATTATAATCCAAATATACTTTTGGATATACTGATATTGATGATGTGGTTTGCCTCTATCTGGCCTATCTATTTGTATCTTAATCTAGCCTCTGCATTTGCAGTTACATTTATCAGTTTTCTTGTACTTAGCCAAGTGCAGAGCTACCCAAAGTGCAAAGTGAATGGAAAAAATAATCCTTTTAGGTGACACTGAGATAGAAAACATGAAAC

Coding sequence (CDS)

ATGAATCAACCGTCCAAAAAGAAGAATTTCCGGAGAAGAAATTGTTGTGATTCAGAAGATGGAGGAGATGATGCAAACTCCGTCAGCACCAAATTGGAGGAGGAGGAAGAAGAGCACAGGTTGGCATTGGAGGAGGTAAAATTCTTGCAGAAACAGAGGGAGAGGAGGGCAGGAATTCCTGCAATTCCTGCAGTATCGACGCAGACTAGCACTGCCGGTGCTGTCGGCGGTCTTGTTCGGAAACCCACTGACGCTAACAGTAATATTGGTGGCGGCGGGGGCGGGGGCAATAAGAATGAAGGTGCTGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACATTCGCTCAGGAAACTGCCGTCATGGTTGAAGATCCCAATATGTTGAAGTACATTGAACAAGAACTGGCGAAGAAAAGAGGAAGAACTGTGGAGAATGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAACTATACAAAATCCCAGAGCATCTTAAAGTGAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAGACCGAGGCTGCAAAAAAGCTTTTGCAGGAAAAGAGATTTGTCGGTCGTTCAAAATCCGAGTTTAGCATCCCATCTAGTTATAGTGCCGATTACTTCCACCGTGGCAGGGATTATGCTGAAAAACTTAGAAGAGAACATCCTGAGCTGTACAAGAATAGAAATTTGCAAGATGATGGTTCAGGCTCCAAACCAACTGATAGTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCAACCGATGAGTTCATGCTAGAACGCTTCCGGAAACGTGAACGCCATCGTGTGATGCGAAGATAA

Protein sequence

MNQPSKKKNFRRRNCCDSEDGGDDANSVSTKLEEEEEEHRLALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDANSNIGGGGGGGNKNEGAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQAATDEFMLERFRKRERHRVMRR
BLAST of Carg17718 vs. NCBI nr
Match: XP_022922521.1 (protein COP1 SUPPRESSOR 2-like [Cucurbita moschata] >XP_022922530.1 protein COP1 SUPPRESSOR 2-like [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0

Query: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX 100
           LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX
Sbjct: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX 100

Query: 101 XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160
           XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE
Sbjct: 101 XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160

Query: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220
           DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR
Sbjct: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220

Query: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280
           SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ
Sbjct: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280

Query: 281 AATDEFMLERFRKRERHRVMRR 303
           AATDEFMLERFRKRERHRVMRR
Sbjct: 281 AATDEFMLERFRKRERHRVMRR 302

BLAST of Carg17718 vs. NCBI nr
Match: XP_022990156.1 (protein COP1 SUPPRESSOR 2-like [Cucurbita maxima] >XP_022990157.1 protein COP1 SUPPRESSOR 2-like [Cucurbita maxima])

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 254/262 (96.95%), Postives = 254/262 (96.95%), Query Frame = 0

Query: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX 100
           LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDA      XXXXXXXXX
Sbjct: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDANSNIGGXXXXXXXXX 100

Query: 101 XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160
           XXXXXXX  DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE
Sbjct: 101 XXXXXXXKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160

Query: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220
           DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR
Sbjct: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220

Query: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280
           SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ
Sbjct: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280

Query: 281 AATDEFMLERFRKRERHRVMRR 303
           AATDEFMLERFRKRERHRVMRR
Sbjct: 281 AATDEFMLERFRKRERHRVMRR 302

BLAST of Carg17718 vs. NCBI nr
Match: XP_022938620.1 (protein COP1 SUPPRESSOR 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 2.9e-97
Identity = 222/263 (84.41%), Postives = 226/263 (85.93%), Query Frame = 0

Query: 44  EEVKFLQKQRERRAGIPA----IPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXX 103
           EEVKFLQKQRERRAGIPA                            XXXXXXXXXXXXXX
Sbjct: 44  EEVKFLQKQRERRAGIPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 103

Query: 104 XXXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQA 163
           XXXXX     DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRT+E VEGAENDL QA
Sbjct: 104 XXXXXEGDKDDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTLETVEGAENDLNQA 163

Query: 164 EDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVG 223
           EDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVG
Sbjct: 164 EDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVG 223

Query: 224 RSKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQR 283
           RSKSEFSIPSS+SADYFHRGRDYAEKLRREHPELYK RNLQ+DGSGSKPTD+GTEAAGQR
Sbjct: 224 RSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQR 283

Query: 284 QAATDEFMLERFRKRERHRVMRR 303
           QAATDEFMLERFRKRERHR MRR
Sbjct: 284 QAATDEFMLERFRKRERHRGMRR 306

BLAST of Carg17718 vs. NCBI nr
Match: XP_008466165.1 (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 7.1e-96
Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEH
Sbjct: 112 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEH 171

Query: 170 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 229
           LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS
Sbjct: 172 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 231

Query: 230 SYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQAATDEFMLE 289
           SYSADYFHRGRDYAEKLRREHPELYK+R+LQDDGSGSKP ++GTEAAGQRQAATDEFMLE
Sbjct: 232 SYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLE 291

Query: 290 RFRKRERHRVMRR 303
           RFRKRERHRVMRR
Sbjct: 292 RFRKRERHRVMRR 304

BLAST of Carg17718 vs. NCBI nr
Match: XP_022146355.1 (uncharacterized protein C9orf78 homolog [Momordica charantia])

HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95
Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DLVLQDTFAQETAVMVEDPNML YIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEH
Sbjct: 114 DLVLQDTFAQETAVMVEDPNMLMYIEQELAKKRGRTVEAVEGAENDLKQAEDELYKIPEH 173

Query: 170 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 229
           LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS
Sbjct: 174 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 233

Query: 230 SYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQAATDEFMLE 289
           SYSADYFHRGRDYAEKLRR+HPELYK+R+LQDDGSGSKPTD+GTEAAGQRQAATDEFMLE
Sbjct: 234 SYSADYFHRGRDYAEKLRRDHPELYKDRSLQDDGSGSKPTDTGTEAAGQRQAATDEFMLE 293

Query: 290 RFRKRERHRVMRR 303
           RFRKRERHRVMRR
Sbjct: 294 RFRKRERHRVMRR 306

BLAST of Carg17718 vs. TAIR10
Match: AT1G02330.1 (Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756))

HSP 1 Score: 295.0 bits (754), Expect = 5.1e-80
Identity = 168/267 (62.92%), Postives = 198/267 (74.16%), Query Frame = 0

Query: 42  ALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXXX 101
           ALEEVKFLQK RER+ GIPA+   ST  S+ G V  + +  T+                 
Sbjct: 36  ALEEVKFLQKLRERKLGIPALS--STAQSSIGKVKPVEKTETEG---------------- 95

Query: 102 XXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAED 161
                   +LVLQDTFAQETAV++EDPNM+KYIEQELAKKRGR +++ E  EN+LK+   
Sbjct: 96  -----EKEELVLQDTFAQETAVLIEDPNMVKYIEQELAKKRGRNIDDAEEVENELKRVXX 155

Query: 162 ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS 221
             YKIP+HLKVK+R+S ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQE+R +GR 
Sbjct: 156 XXYKIPDHLKVKKRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQERRLMGRP 215

Query: 222 KSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNR-NLQDDGSGSKP-----TDSGTEA 281
           KSEFSIPSSYSADYF RG+DYAEKLRREHPELYK+R   Q DG  +KP     T++  ++
Sbjct: 216 KSEFSIPSSYSADYFQRGKDYAEKLRREHPELYKDRGGPQADGEAAKPSTSSSTNNNADS 275

Query: 282 AGQRQAATDEFMLERFRKRERHRVMRR 303
              RQAATD+ MLERFRKRER+RVMRR
Sbjct: 276 GKSRQAATDQIMLERFRKRERNRVMRR 279

BLAST of Carg17718 vs. Swiss-Prot
Match: sp|F4HVZ5|CSU2_ARATH (Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 9.2e-79
Identity = 168/267 (62.92%), Postives = 198/267 (74.16%), Query Frame = 0

Query: 42  ALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXXX 101
           ALEEVKFLQK RER+ GIPA+   ST  S+ G V  + +  T+                 
Sbjct: 36  ALEEVKFLQKLRERKLGIPALS--STAQSSIGKVKPVEKTETEG---------------- 95

Query: 102 XXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAED 161
                   +LVLQDTFAQETAV++EDPNM+KYIEQELAKKRGR +++ E  EN+LK+   
Sbjct: 96  -----EKEELVLQDTFAQETAVLIEDPNMVKYIEQELAKKRGRNIDDAEEVENELKRVXX 155

Query: 162 ELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS 221
             YKIP+HLKVK+R+S ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQE+R +GR 
Sbjct: 156 XXYKIPDHLKVKKRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQERRLMGRP 215

Query: 222 KSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNR-NLQDDGSGSKP-----TDSGTEA 281
           KSEFSIPSSYSADYF RG+DYAEKLRREHPELYK+R   Q DG  +KP     T++  ++
Sbjct: 216 KSEFSIPSSYSADYFQRGKDYAEKLRREHPELYKDRGGPQADGEAAKPSTSSSTNNNADS 275

Query: 282 AGQRQAATDEFMLERFRKRERHRVMRR 303
              RQAATD+ MLERFRKRER+RVMRR
Sbjct: 276 GKSRQAATDQIMLERFRKRERNRVMRR 279

BLAST of Carg17718 vs. Swiss-Prot
Match: sp|Q3TQI7|TLS1_MOUSE (Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 70/196 (35.71%), Postives = 105/196 (53.57%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DL L  +F+ ET    ED +M+KYIE EL K++G   +  + A+   K AED LY++PE+
Sbjct: 95  DLHLGTSFSAETNRRDEDADMMKYIETELKKRKGIVEQEEQKAKP--KNAEDCLYELPEN 154

Query: 170 LKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFS 229
           ++V      E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +      
Sbjct: 155 IRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSF 214

Query: 230 IPSSYSADYFHRGRDYAEKLR---REHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQA-- 289
           +P++ + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A  
Sbjct: 215 VPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLR-VGDTEKPEPERSPPNRKRPANE 274

Query: 290 -ATDEFMLERFRKRER 297
            ATD++  E+F+K  R
Sbjct: 275 KATDDYHYEKFKKMNR 287

BLAST of Carg17718 vs. Swiss-Prot
Match: sp|Q9NZ63|TLS1_HUMAN (Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.6e-14
Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DL L  +F+ ET    ED +M+KYIE EL K++G  VE+ E      K AED LY++PE+
Sbjct: 95  DLHLGTSFSAETNRRDEDADMMKYIETELKKRKG-IVEHEEQKVKP-KNAEDCLYELPEN 154

Query: 170 LKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFS 229
           ++V      E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +      
Sbjct: 155 IRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSF 214

Query: 230 IPSSYSADYFHRGRDYAEKLR---REHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQA-- 289
           +P++ + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A  
Sbjct: 215 VPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLR-VGDTEKPEPERSPPNRKRPANE 274

Query: 290 -ATDEFMLERFRKRER 297
            ATD++  E+F+K  R
Sbjct: 275 KATDDYHYEKFKKMNR 287

BLAST of Carg17718 vs. Swiss-Prot
Match: sp|Q5RC87|TLS1_PONAB (Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 71/196 (36.22%), Postives = 104/196 (53.06%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DL L  +F+ ET    ED +M+KYIE EL K++G  VE+ E      K AED LY++PE+
Sbjct: 95  DLHLGTSFSAETNRRDEDADMMKYIETELKKRKG-IVEHEEQKVKP-KNAEDCLYELPEN 154

Query: 170 LKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRSKSEFS 229
           ++V      E   S Q  +GI EV   I+ K+KNI  TE AK +LL E++   +      
Sbjct: 155 IRVSSAKKTEEMLSNQMLSGIPEVDQGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSF 214

Query: 230 IPSSYSADYFHRGRDYAEKLR---REHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQA-- 289
           +P++ + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A  
Sbjct: 215 VPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLR-VGDTEKPEPERSPPNRKRPANE 274

Query: 290 -ATDEFMLERFRKRER 297
            ATD++  E+F+K  R
Sbjct: 275 KATDDYHYEKFKKMNR 287

BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A1S3CQV4|A0A1S3CQV4_CUCME (uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 4.7e-96
Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEH
Sbjct: 112 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEH 171

Query: 170 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 229
           LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS
Sbjct: 172 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 231

Query: 230 SYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQAATDEFMLE 289
           SYSADYFHRGRDYAEKLRREHPELYK+R+LQDDGSGSKP ++GTEAAGQRQAATDEFMLE
Sbjct: 232 SYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLE 291

Query: 290 RFRKRERHRVMRR 303
           RFRKRERHRVMRR
Sbjct: 292 RFRKRERHRVMRR 304

BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A0A0KLP5|A0A0A0KLP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.3e-95
Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0

Query: 110 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAEDELYKIPEH 169
           DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEH
Sbjct: 127 DLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEH 186

Query: 170 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPS 229
           LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS SEFSIPS
Sbjct: 187 LKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPS 246

Query: 230 SYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQAATDEFMLE 289
           SYSADYFHRGRDYAEKLRREHPELYK+R+LQDDGSGSKP ++GTEAAGQRQAATDEFMLE
Sbjct: 247 SYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLE 306

Query: 290 RFRKRERHRVMRR 303
           RFRKRERHRVMRR
Sbjct: 307 RFRKRERHRVMRR 319

BLAST of Carg17718 vs. TrEMBL
Match: tr|V4VX10|V4VX10_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021552mg PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91
Identity = 186/262 (70.99%), Postives = 211/262 (80.53%), Query Frame = 0

Query: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX 100
           LALEE+KFLQKQRER++GIPAIP+ + Q++      GL +                    
Sbjct: 2   LALEEIKFLQKQRERKSGIPAIPS-ALQSAAXXXXXGLTK-----------------VSE 61

Query: 101 XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160
                    +LVLQDTFAQETAVMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AE
Sbjct: 62  KNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAE 121

Query: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220
           DELYKIPEHLKVK+RNS ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR
Sbjct: 122 DELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGR 181

Query: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280
           +KS+FSIPSSYSADYF RGRDYAEKLRREHPELYK+R  QDDG+GS+PTD+ T+AAG RQ
Sbjct: 182 AKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQ 241

Query: 281 AATDEFMLERFRKRERHRVMRR 303
           AATD+FMLERFRKRERHRVMRR
Sbjct: 242 AATDQFMLERFRKRERHRVMRR 245

BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A061DZN7|A0A061DZN7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_004978 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.8e-91
Identity = 188/262 (71.76%), Postives = 208/262 (79.39%), Query Frame = 0

Query: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX 100
           LALEEVKFLQKQRER++GIPAIP V T        GG+V K T+                
Sbjct: 52  LALEEVKFLQKQRERKSGIPAIPTVQT--------GGVVAKVTE---------------- 111

Query: 101 XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160
                    +LVLQDTFAQETAVMVEDPNM+KY+EQELAKKRGR ++     ENDL +AE
Sbjct: 112 KGEADGEKEELVLQDTFAQETAVMVEDPNMVKYVEQELAKKRGRNMDTKNEVENDLTRAE 171

Query: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220
           DELYKIPEHLKVKRRNS ESSTQWTTGIAEVQLPIE+KL+NIEETEAAKKLLQEKR +GR
Sbjct: 172 DELYKIPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRLMGR 231

Query: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280
           +KSE SIPSS+SADYF RGRDYAEKLRREHPELYK+R  QD+ SGS+PTD+ T+AAG RQ
Sbjct: 232 AKSEVSIPSSFSADYFQRGRDYAEKLRREHPELYKDRGSQDESSGSRPTDTSTDAAGSRQ 289

Query: 281 AATDEFMLERFRKRERHRVMRR 303
           AATDEFMLERFRKRER RVMRR
Sbjct: 292 AATDEFMLERFRKRERQRVMRR 289

BLAST of Carg17718 vs. TrEMBL
Match: tr|A0A2P5R2J9|A0A2P5R2J9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22050 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.9e-90
Identity = 186/262 (70.99%), Postives = 208/262 (79.39%), Query Frame = 0

Query: 41  LALEEVKFLQKQRERRAGIPAIPAVSTQTSTAGAVGGLVRKPTDAXXXXXXXXXXXXXXX 100
           LALEEVKFLQKQRER++GIPAIP+V T        GG+V K T+                
Sbjct: 34  LALEEVKFLQKQRERKSGIPAIPSVQT--------GGIVAKVTE---------------- 93

Query: 101 XXXXXXXXXDLVLQDTFAQETAVMVEDPNMLKYIEQELAKKRGRTVENVEGAENDLKQAE 160
                    +LVLQDTFAQETAV+VEDPNM+KY+EQELAKKRGR ++     ENDL +AE
Sbjct: 94  KAEADGEKEELVLQDTFAQETAVLVEDPNMIKYVEQELAKKRGRNMDLKNEVENDLTRAE 153

Query: 161 DELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGR 220
           DELYKIPEHLKVK+RNS ESSTQWTTGIAEVQLPIE+KL+NIEETEAAKKLLQEKR +GR
Sbjct: 154 DELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRLMGR 213

Query: 221 SKSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKNRNLQDDGSGSKPTDSGTEAAGQRQ 280
           +KSE SIPSSYSADYF RGRDYAEKLRREHPELYK+R  QDD +GSKPTD+  +AAG RQ
Sbjct: 214 AKSEVSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDNAGSKPTDASNDAAGSRQ 271

Query: 281 AATDEFMLERFRKRERHRVMRR 303
           AATD+FMLERFRKRER RVMRR
Sbjct: 274 AATDQFMLERFRKRERQRVMRR 271

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022922521.13.7e-121100.00protein COP1 SUPPRESSOR 2-like [Cucurbita moschata] >XP_022922530.1 protein COP1... [more]
XP_022990156.13.7e-12196.95protein COP1 SUPPRESSOR 2-like [Cucurbita maxima] >XP_022990157.1 protein COP1 S... [more]
XP_022938620.12.9e-9784.41protein COP1 SUPPRESSOR 2-like isoform X1 [Cucurbita moschata][more]
XP_008466165.17.1e-9696.89PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis melo][more]
XP_022146355.11.2e-9596.89uncharacterized protein C9orf78 homolog [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT1G02330.15.1e-8062.92Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756)[more]
Match NameE-valueIdentityDescription
sp|F4HVZ5|CSU2_ARATH9.2e-7962.92Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1[more]
sp|Q3TQI7|TLS1_MOUSE1.6e-1435.71Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV... [more]
sp|Q9NZ63|TLS1_HUMAN3.6e-1436.73Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf... [more]
sp|Q5RC87|TLS1_PONAB1.8e-1336.22Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3CQV4|A0A1S3CQV4_CUCME4.7e-9696.89uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 ... [more]
tr|A0A0A0KLP5|A0A0A0KLP5_CUCSA2.3e-9596.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=4 SV=1[more]
tr|V4VX10|V4VX10_9ROSI1.6e-9170.99Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021552mg PE=4 ... [more]
tr|A0A061DZN7|A0A061DZN7_THECC7.8e-9171.76Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_004978 PE=4 SV=1[more]
tr|A0A2P5R2J9|A0A2P5R2J9_GOSBA3.9e-9070.99Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22050 PE=4 SV... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010756Tls1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17718-RACarg17718-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..52
NoneNo IPR availableCOILSCoilCoilcoord: 195..215
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..302
IPR010756Telomere length and silencing protein 1PFAMPF07052Hep_59coord: 116..211
e-value: 1.6E-25
score: 89.8
IPR010756Telomere length and silencing protein 1PANTHERPTHR13486FAMILY NOT NAMEDcoord: 4..297