Csa4G242860 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G242860
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Gb\|AAD31058.1
Location	Chr4 : 10130198 .. 10131094 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTGAGCTCTGCAACACAACAAAAGTGGTGAAGAGTGAGATTAGCTGCCAATCCAGATATACCCGTACTTCTTTTTTTCACTCACTACTGTCATTAGTTTATGAGAAATTGCATCGATCTCAAATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTTGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAATTCCTTAGCACAAAAAGTCTCGAAATTTGAATTTGGAAATTTTCAATGACAAATGAAACTCACCCGTGAGTCGAGATCGGGTTGGTATAAATACGTATAAACGTTTAGAGCAATATTTTATAAAATATAGTTAATTTTCATATTTTATACCTCGATAGAGTATCA

mRNA sequence

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTTGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAA

Coding sequence (CDS)

ATGCCACCAAATTTCCTATCCAGTCTAAAGCGACATACTCATCCTCTAATTTGGATCGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTAATCATAGCAGGCATCGTCATCTTCATCGGCTATGTTACGATCCGCCCTAGGGTACCGTCAATCAGTGTAACCGACGGTCATCTTGAAAGAATCCGAAGCAGTAGAACCGGATTGCTTGAAGTCCAAATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAAAGCACACGCAGGCTTTTCAAAGACGGATTTTGTCCTACTTTTTGACGGAATAGAAATCGCATCACTAGTAGCTCATCGGCCGTTCAAAGTGAACAAAATGAATTACCTGGATTTGCATTTCTTGGTGGAATCATCGGCAATTCCGCTGGATTCAACACAGATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATACAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAGTTTTGGGACCGCTCAAGTTCTGGTGCCGATTGGATTGTCACCTCAGGTTTTTCCCGCGCAATGGAAGCTATATCCCCACGCCTTGTTCTTCAAAGCAAAAATAA

Protein sequence

MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNGSYIPTPCSSKQK*

Homology

[Close]

BLAST of Csa4G242860 vs. TrEMBL
Match: A0A0A0L1I9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242860 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 5.5e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
           RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
           YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
           HLRFFPRNGSYIPTPCSSKQK
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of Csa4G242860 vs. TrEMBL
Match: V4T9C5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 110/201 (54.73%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HL+
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
             +    GLLE Q+ IV+R  N NAKA A FS T   L FDG++IA LVA  PF+V+K +
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
            +D +++VES  +PLD    +    SLK+D+++FDLKG SRTRWR+GVLG +KFWCRLDC
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
            L+F P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of Csa4G242860 vs. TrEMBL
Match: A0A067DL89_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 110/201 (54.73%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HL+
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
             +    GLLE Q+ IV+R  N NAKA A FS T   L FDG++IA LVA  PF+V+K +
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
            +D +++VES  +PLD    +    SLK+D+++FDLKG SRTRWR+GVLG +KFWCRLDC
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
            L+F P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of Csa4G242860 vs. TrEMBL
Match: M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-56
Identity = 110/197 (55.84%), Postives = 140/197 (71.07%), Query Frame = 1


Query: 5   FLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRS 64
           F  + +R THPL+W A +IC  IA+AVIIAGI +F GY+ I PRVP I+VT  HL+  ++
Sbjct: 6   FHGATQRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDL 124
           S  GLL+ ++ I+V+AEN N KAHA FS T F L F G+ IA LVA  PF V K + +D 
Sbjct: 66  SVAGLLDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF 184
           H+LV+SS+IPL   QM  +  SLKRD I F+LKG+ R RWRVG +G +KFW  L+CHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRF 185

Query: 185 FPRNGSYIPTPCSSKQK 202
            P NGSYI +PCSS+ K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of Csa4G242860 vs. TrEMBL
Match: A5ATK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035515 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.2e-55
Identity = 108/202 (53.47%), Postives = 144/202 (71.29%), Query Frame = 1


Query: 1   MPPNFLS-SLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHL 60
           MPP  L     + THPL+W A +IC  IALAVI+AG+ +F+GY+ I PRVP+++VTD  L
Sbjct: 487 MPPRKLVVGSGQKTHPLVWCAAVICVFIALAVIVAGVCVFVGYLVIHPRVPALTVTDARL 546

Query: 61  ERIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKM 120
           +R+  S+ G+++VQM + +RAEN NAKAHA FS T   + F  IEIA LVA+ PF V+K 
Sbjct: 547 DRLDFSQAGVMDVQMTVYIRAENHNAKAHASFSDTSLTMSFHEIEIAKLVAY-PFDVSKN 606

Query: 121 NYLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLD 180
           + +D +++VESS+IPL S  M  +  SLK D I+FDLKGSS+T WR+G+LG +  WC L+
Sbjct: 607 SSIDFNYVVESSSIPLGSRDMDFVDRSLKEDKIKFDLKGSSKTHWRIGLLGSVTLWCHLN 666

Query: 181 CHLRFFPRNGSYIPTPCSSKQK 202
           C LRF P N SYI + CSSK K
Sbjct: 667 CELRFHPSNSSYIHSYCSSKSK 687

[Close]

BLAST of Csa4G242860 vs. TAIR10
Match: AT5G45320.1 (AT5G45320.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 198.4 bits (503), Expect = 4.3e-51
Identity = 100/192 (52.08%), Postives = 132/192 (68.75%), Query Frame = 1


Query: 11  RH-THPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGL 70
           RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HL+ ++    G+
Sbjct: 7   RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFLKYDIVGV 66

Query: 71  LEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVE 130
           L+ Q+ IV+R EN NAKAHA F +T+F L ++G  IA L A   F+V K   + L +LV+
Sbjct: 67  LQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPE-FEVVKEKSMFLPYLVQ 126

Query: 131 SSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNG 190
           S  IPL+ T MQ + +++K+D+I F+LKG SRTRWRVG LG +KF C L C LRF P + 
Sbjct: 127 SYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLRFRPSDH 186

Query: 191 SYIPTPCSSKQK 202
           SYIP+PC+S  K
Sbjct: 187 SYIPSPCTSAHK 197

[Close]

BLAST of Csa4G242860 vs. TAIR10
Match: AT3G26350.1 (AT3G26350.1 LOCATED IN: chloroplast)

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-12
Identity = 48/191 (25.13%), Postives = 82/191 (42.93%), Query Frame = 1


Query: 11  RHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGLL 70
           R T+ + W A   CA   + +I+ G++I I Y+  RPR P + ++  +L         LL
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVES 130
              + I+    N + K+   FS   F L +    IA+     PFKV K   +  +  + S
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYI-EPFKVPKKTSMFANVHLVS 286

Query: 131 SAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF-FPRNG 190
           S + L +TQ + L   ++   +  +L+G    R  +G L    +     C +    P  G
Sbjct: 287 SQVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLNGPPLG 346

Query: 191 SYIPTPCSSKQ 201
           +     C++K+
Sbjct: 347 AMRARRCNTKR 356

[Close]

BLAST of Csa4G242860 vs. NCBI nr
Match: gi|700198828|gb|KGN53986.1| (hypothetical protein Csa_4G242860 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 7.8e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
           RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
           YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
           HLRFFPRNGSYIPTPCSSKQK
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of Csa4G242860 vs. NCBI nr
Match: gi|645265122|ref|XP_008238002.1| (PREDICTED: uncharacterized protein LOC103336689 [Prunus mume])

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57
Identity = 111/197 (56.35%), Postives = 141/197 (71.57%), Query Frame = 1


Query: 5   FLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRS 64
           F  + +R THPL+W A +IC  IA+AVII GIV+F+GY+ I PRVP I+VT  HL+  ++
Sbjct: 6   FHGATQRATHPLVWFAAVICTVIAIAVIITGIVVFVGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDL 124
           S  GLL+ ++ ++VRAEN N KAHA FS T F L F G+ IA LVA  PF V K + +D 
Sbjct: 66  SVAGLLDTEITLIVRAENDNPKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF 184
           H+LV+SS+IPL   QM  +  SLKRD I F+LKG+SR RWRVG  G +KFW  L+CHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNSRARWRVGPFGSVKFWDHLNCHLRF 185

Query: 185 FPRNGSYIPTPCSSKQK 202
            P NGSYI +PCSS+ K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of Csa4G242860 vs. NCBI nr
Match: gi|567880675|ref|XP_006432896.1| (hypothetical protein CICLE_v10003495mg [Citrus clementina])

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57
Identity = 110/201 (54.73%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HL+
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
             +    GLLE Q+ IV+R  N NAKA A FS T   L FDG++IA LVA  PF+V+K +
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
            +D +++VES  +PLD    +    SLK+D+++FDLKG SRTRWR+GVLG +KFWCRLDC
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFFPRNGSYIPTPCSSKQK 202
            L+F P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of Csa4G242860 vs. NCBI nr
Match: gi|595850056|ref|XP_007209845.1| (hypothetical protein PRUPE_ppa014689mg [Prunus persica])

HSP 1 Score: 227.3 bits (578), Expect = 2.5e-56
Identity = 110/197 (55.84%), Postives = 140/197 (71.07%), Query Frame = 1


Query: 5   FLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRS 64
           F  + +R THPL+W A +IC  IA+AVIIAGI +F GY+ I PRVP I+VT  HL+  ++
Sbjct: 6   FHGATQRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDL 124
           S  GLL+ ++ I+V+AEN N KAHA FS T F L F G+ IA LVA  PF V K + +D 
Sbjct: 66  SVAGLLDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRF 184
           H+LV+SS+IPL   QM  +  SLKRD I F+LKG+ R RWRVG +G +KFW  L+CHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRF 185

Query: 185 FPRNGSYIPTPCSSKQK 202
            P NGSYI +PCSS+ K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of Csa4G242860 vs. NCBI nr
Match: gi|1009158815|ref|XP_015897483.1| (PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba])

HSP 1 Score: 223.4 bits (568), Expect = 3.6e-55
Identity = 105/192 (54.69%), Postives = 141/192 (73.44%), Query Frame = 1


Query: 10  KRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLERIRSSRTGL 69
           ++ THPLIW A IICA IA AVIIAG+ +FIGY+ I PRVP I+V D HL++I+S   GL
Sbjct: 11  EKRTHPLIWFAAIICAIIATAVIIAGVGVFIGYMVIHPRVPVIAVVDAHLDKIQSDIAGL 70

Query: 70  LEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMNYLDLHFLVE 129
           LE Q+ I+++A+N NAKAHA FS T F+L F G+ IA LVA  PF+V K + ++ +++V 
Sbjct: 71  LETQVTILIKAQNDNAKAHASFSDTSFILSFQGMMIAKLVA-EPFEVKKNDSVEFNYVVP 130

Query: 130 SSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDCHLRFFPRNG 189
           SS+IPL   QM  +  +LK+D I FDL+G+SR RWR+G+ G +KFWC L C L+F P NG
Sbjct: 131 SSSIPLTPDQMDEVDLALKQDKITFDLRGNSRARWRIGLFGSVKFWCHLSCRLKFHPLNG 190

Query: 190 SYIPTPCSSKQK 202
           +Y+  PCSS+ K
Sbjct: 191 TYMNAPCSSRAK 201

The following BLAST results are available for this feature:

BLAST of Csa4G242860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1I9_CUCSA	5.5e-111	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242860 PE=4 SV=1	[more]
V4T9C5_9ROSI	1.6e-57	54.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1	[more]
A0A067DL89_CITSI	1.6e-57	54.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1	[more]
M5WBE7_PRUPE	1.7e-56	55.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1	[more]
A5ATK1_VITVI	7.2e-55	53.47	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035515 PE=4 SV=1	[more]

BLAST of Csa4G242860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	4.3e-51	52.08	FUNCTIONS IN: molecular_function unknown	[more]
AT3G26350.1	5.2e-12	25.13	LOCATED IN: chloroplast	[more]

BLAST of Csa4G242860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198828\|gb\|KGN53986.1\|	7.8e-111	100.00	hypothetical protein Csa_4G242860 [Cucumis sativus]	[more]
gi\|645265122\|ref\|XP_008238002.1\|	2.2e-57	56.35	PREDICTED: uncharacterized protein LOC103336689 [Prunus mume]	[more]
gi\|567880675\|ref\|XP_006432896.1\|	2.2e-57	54.73	hypothetical protein CICLE_v10003495mg [Citrus clementina]	[more]
gi\|595850056\|ref\|XP_007209845.1\|	2.5e-56	55.84	hypothetical protein PRUPE_ppa014689mg [Prunus persica]	[more]
gi\|1009158815\|ref\|XP_015897483.1\|	3.6e-55	54.69	PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU133645	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G242860.1	Csa4G242860.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU133645	CU133645	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 10..201 score: 3.6
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 10..201 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G242860	Cla023207	Watermelon (97103) v1	cuwmB355
Csa4G242860	MELO3C010534	Melon (DHL92) v3.5.1	cumeB308
Csa4G242860	ClCG11G016180	Watermelon (Charleston Gray)	cuwcgB284
Csa4G242860	Lsi04G018540	Bottle gourd (USVL1VR-Ls)	culsiB294
Csa4G242860	Cla97C11G222120	Watermelon (97103) v2	cuwmbB285
Csa4G242860	Bhi09G002293	Wax gourd	cuwgoB421
Csa4G242860	CSPI04G12170	Wild cucumber (PI 183967)	cpicuB181
Csa4G242860	CmaCh09G007560	Cucurbita maxima (Rimu)	cmacuB023
Csa4G242860	CmaCh01G013510	Cucurbita maxima (Rimu)	cmacuB470
Csa4G242860	CmoCh09G007470	Cucurbita moschata (Rifu)	cmocuB014
Csa4G242860	CmoCh01G014040	Cucurbita moschata (Rifu)	cmocuB459
Csa4G242860	Cp4.1LG06g05950	Cucurbita pepo (Zucchini)	cpecuB785
Csa4G242860	Cp4.1LG02g02900	Cucurbita pepo (Zucchini)	cpecuB577
Csa4G242860	Carg00297	Silver-seed gourd	carcuB0690
Csa4G242860	Carg20071	Silver-seed gourd	carcuB1059

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G242860	Cucurbita maxima (Rimu)	cmacuB865
Csa4G242860	Cucurbita moschata (Rifu)	cmocuB853
Csa4G242860	Melon (DHL92) v3.5.1	cumeB278
Csa4G242860	Cucurbita pepo (Zucchini)	cpecuB502
Csa4G242860	Bottle gourd (USVL1VR-Ls)	culsiB264
Csa4G242860	Cucumber (Gy14) v2	cgybcuB168
Csa4G242860	Melon (DHL92) v3.6.1	cumedB294
Csa4G242860	Melon (DHL92) v3.6.1	cumedB316
Csa4G242860	Silver-seed gourd	carcuB0508