Carg00297 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00297
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_001 : 1640128 .. 1640733 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCAAATTTCCTATCCAGCCTAAAGCGGCATACTCATCCCCTGATTTGGATTGCCGGCATAATCTGTGCTGCCATAGCCCTAGCAGTTATAATCGCAGGCATCGTCATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTGCCTACAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTTGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGAGCACACGCAAGCTTCTCACATACCGATTTCGTCCTTATCTTCGACGGCATAGAAATCGCATCACTGGTGGCTCACCGACCGTTCAAAGTGAACAAAATGAGTTACCTGGATTTGCACTTCTTAGTGGAATCGTCGGCGATTCCGCTAAATCCAACGCAGATGCAGCATCTAGGCTGGTCGCTGAAGAGGAATCTGATGCAGTTCGATCTGAAAGGAAGCTCGAGAACTCGATGGAGAGTTGGAGTTCTTGGACCGCTGAAGTTTTGGTGCCGTTTGAACTGCCATCTCAGGTTTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTTCTTCGAGGGATAAGTAA

mRNA sequence

ATGCCACCAAATTTCCTATCCAGCCTAAAGCGGCATACTCATCCCCTGATTTGGATTGCCGGCATAATCTGTGCTGCCATAGCCCTAGCAGTTATAATCGCAGGCATCGTCATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTGCCTACAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTTGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGAGCACACGCAAGCTTCTCACATACCGATTTCGTCCTTATCTTCGACGGCATAGAAATCGCATCACTGGTGGCTCACCGACCGTTCAAAGTGAACAAAATGAGTTACCTGGATTTGCACTTCTTAGTGGAATCGTCGGCGATTCCGCTAAATCCAACGCAGATGCAGCATCTAGGCTGGTCGCTGAAGAGGAATCTGATGCAGTTCGATCTGAAAGGAAGCTCGAGAACTCGATGGAGAGTTGGAGTTCTTGGACCGCTGAAGTTTTGGTGCCGTTTGAACTGCCATCTCAGGTTTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTTCTTCGAGGGATAAGTAA

Coding sequence (CDS)

ATGCCACCAAATTTCCTATCCAGCCTAAAGCGGCATACTCATCCCCTGATTTGGATTGCCGGCATAATCTGTGCTGCCATAGCCCTAGCAGTTATAATCGCAGGCATCGTCATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTGCCTACAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTTGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGAGCACACGCAAGCTTCTCACATACCGATTTCGTCCTTATCTTCGACGGCATAGAAATCGCATCACTGGTGGCTCACCGACCGTTCAAAGTGAACAAAATGAGTTACCTGGATTTGCACTTCTTAGTGGAATCGTCGGCGATTCCGCTAAATCCAACGCAGATGCAGCATCTAGGCTGGTCGCTGAAGAGGAATCTGATGCAGTTCGATCTGAAAGGAAGCTCGAGAACTCGATGGAGAGTTGGAGTTCTTGGACCGCTGAAGTTTTGGTGCCGTTTGAACTGCCATCTCAGGTTTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTTCTTCGAGGGATAAGTAA

Protein sequence

MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRDK

Homology

[Close]

BLAST of Carg00297 vs. NCBI nr
Match: XP_022940744.1 (uncharacterized protein LOC111446247 [Cucurbita moschata])

HSP 1 Score: 410.2 bits (1053), Expect = 4.0e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
           YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
           HLRFYPRNGSYIPAPCSSRDK
Sbjct: 181 HLRFYPRNGSYIPAPCSSRDK 201

[Close]

BLAST of Carg00297 vs. NCBI nr
Match: XP_022937013.1 (uncharacterized protein LOC111443437 [Cucurbita moschata])

HSP 1 Score: 384.4 bits (986), Expect = 2.3e-103
Identity = 188/201 (93.53%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRP VP+ISVTDGHLD
Sbjct: 13  MPPNFLSSLKRHTHPLIWIAGIICATIAVAVIIAGIVIFIGYVTIRPTVPSISVTDGHLD 72

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIR+SR GLLEVQMKIVVRAENQNARA ASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS
Sbjct: 73  RIRNSRIGLLEVQMKIVVRAENQNARAQASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 132

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
           YLDLHFLVESSAIPLNP QMQHL WSL RNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC
Sbjct: 133 YLDLHFLVESSAIPLNPMQMQHLSWSLNRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 192

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
            LRFYPRNGSYIPAPCSS+DK
Sbjct: 193 RLRFYPRNGSYIPAPCSSKDK 213

[Close]

BLAST of Carg00297 vs. NCBI nr
Match: XP_022135525.1 (uncharacterized protein LOC111007456 [Momordica charantia])

HSP 1 Score: 383.6 bits (984), Expect = 4.0e-103
Identity = 187/201 (93.03%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPP FLSSLKRHTHPLIWIAGIICA IALAVII GIVIFIGYVTIRPRVP+ISVTDGHLD
Sbjct: 1   MPPKFLSSLKRHTHPLIWIAGIICATIALAVIIGGIVIFIGYVTIRPRVPSISVTDGHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHASFS TDFVLIFDGIEIASLVA RPFKV+KMS
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSQTDFVLIFDGIEIASLVARRPFKVSKMS 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
           YLDLHFLVESSAIPLNPTQM HL WSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMDHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
           HLRF+PRNGSY+PAPCSS+ K
Sbjct: 181 HLRFHPRNGSYVPAPCSSKGK 201

[Close]

BLAST of Carg00297 vs. NCBI nr
Match: XP_022976855.1 (uncharacterized protein LOC111477102 [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 8.9e-103
Identity = 186/201 (92.54%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVT RP VP+ISVTDGHLD
Sbjct: 13  MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTTRPTVPSISVTDGHLD 72

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIR+SR GLLEVQMK+VVRAENQNAR  A FSHTDFVLIFDGIEIASLVAHRPFKVNKMS
Sbjct: 73  RIRNSRIGLLEVQMKLVVRAENQNARTQARFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 132

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
           YLDLHFLVESSAIPLNP QMQHL WSL RNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC
Sbjct: 133 YLDLHFLVESSAIPLNPMQMQHLSWSLNRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 192

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
           HLRFYPRNGSYIPAPCSS+DK
Sbjct: 193 HLRFYPRNGSYIPAPCSSKDK 213

[Close]

BLAST of Carg00297 vs. NCBI nr
Match: KGN53986.1 (hypothetical protein Csa_4G242860 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 1.7e-101
Identity = 183/201 (91.04%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHL+
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS TDFVL+FDGIEIASLVAHRPFKVNKM+
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
           YLDLHFLVESSAIPL+ TQMQHL WSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWCRL+C
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
           HLRF+PRNGSYIP PCSS+ K
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of Carg00297 vs. TAIR10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-51
Identity = 100/192 (52.08%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 11  RH-THPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGL 70
           RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HLD ++    G+
Sbjct: 7   RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFLKYDIVGV 66

Query: 71  LEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMSYLDLHFLVE 130
           L+ Q+ IV+R EN NA+AHA F  T+F L ++G  IA L A   F+V K   + L +LV+
Sbjct: 67  LQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPE-FEVVKEKSMFLPYLVQ 126

Query: 131 SSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNG 190
           S  IPLNPT MQ + +++K++++ F+LKG SRTRWRVG LG +KF C L+C LRF P + 
Sbjct: 127 SYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLRFRPSDH 186

Query: 191 SYIPAPCSSRDK 202
           SYIP+PC+S  K
Sbjct: 187 SYIPSPCTSAHK 197

[Close]

BLAST of Carg00297 vs. TrEMBL
Match: tr|A0A0A0L1I9|A0A0A0L1I9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242860 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-101
Identity = 183/201 (91.04%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHL+
Sbjct: 1   MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
           RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS TDFVL+FDGIEIASLVAHRPFKVNKM+
Sbjct: 61  RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
           YLDLHFLVESSAIPL+ TQMQHL WSLKR+L+QFDLKGSSRTRWRVGVLGPLKFWCRL+C
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
           HLRF+PRNGSYIP PCSS+ K
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201

[Close]

BLAST of Carg00297 vs. TrEMBL
Match: tr|M5WBE7|M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G014700 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.4e-58
Identity = 113/197 (57.36%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 5   FLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRS 64
           F  + +R THPL+W A +IC  IA+AVIIAGI +F GY+ I PRVP I+VT  HLD  ++
Sbjct: 6   FHGATQRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQN 65

Query: 65  SRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMSYLDL 124
           S  GLL+ ++ I+V+AEN N +AHASFS T F L F G+ IA LVA  PF V K S +D 
Sbjct: 66  SVAGLLDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVA-LPFDVKKNSSVDF 125

Query: 125 HFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRF 184
           H+LV+SS+IPL+P QM  +  SLKR+ + F+LKG+ R RWRVG +G +KFW  LNCHLRF
Sbjct: 126 HYLVQSSSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRF 185

Query: 185 YPRNGSYIPAPCSSRDK 202
           +P NGSYI +PCSSR K
Sbjct: 186 HPSNGSYIHSPCSSRAK 201

[Close]

BLAST of Carg00297 vs. TrEMBL
Match: tr|V4T9C5|V4T9C5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003495mg PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.2e-57
Identity = 110/201 (54.73%), Postives = 145/201 (72.14%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HLD
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
             +    GLLE Q+ IV+R  N NA+A ASFS T   L FDG++IA LVA  PF+V+K S
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
            +D +++VES  +PL+P   +    SLK+++++FDLKG SRTRWR+GVLG +KFWCRL+C
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
            L+F+P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of Carg00297 vs. TrEMBL
Match: tr|A0A067DL89|A0A067DL89_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029005mg PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.2e-57
Identity = 110/201 (54.73%), Postives = 145/201 (72.14%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MPP F    +R THPLIW+  IIC  +A+AVIIAGIV+F GY+ + PR+P +SV   HLD
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
             +    GLLE Q+ IV+R  N NA+A ASFS T   L FDG++IA LVA  PF+V+K S
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
            +D +++VES  +PL+P   +    SLK+++++FDLKG SRTRWR+GVLG +KFWCRL+C
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
            L+F+P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of Carg00297 vs. TrEMBL
Match: tr|A0A2H5PMF1|A0A2H5PMF1_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_149860 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.4e-56
Identity = 110/201 (54.73%), Postives = 145/201 (72.14%), Query Frame = 0


Query: 1   MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
           MP  FL   +R TH LIW+  IIC  +A+AVIIAGIV+FIGY+ + PR+P +SV   HLD
Sbjct: 1   MPSKFLPPRRRSTHLLIWLIAIICTILAIAVIIAGIVVFIGYLVMHPRIPVMSVVGAHLD 60

Query: 61  RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
             +    GLLE Q+ IV+R  N NA+A ASFS T   L FDG++IA LVA  PF+V+K S
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNS 120

Query: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
            +D +++VES  +PL+P   +    SLK+++++FDLKG SRTRWR+GVLG +KFWCRL+C
Sbjct: 121 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 180

Query: 181 HLRFYPRNGSYIPAPCSSRDK 202
            L+F+P NGSYIP+ CSS  K
Sbjct: 181 QLKFHPSNGSYIPSRCSSTTK 200

The following BLAST results are available for this feature:

BLAST of Carg00297 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940744.1	4.0e-111	100.00	uncharacterized protein LOC111446247 [Cucurbita moschata]	[more]
XP_022937013.1	2.3e-103	93.53	uncharacterized protein LOC111443437 [Cucurbita moschata]	[more]
XP_022135525.1	4.0e-103	93.03	uncharacterized protein LOC111007456 [Momordica charantia]	[more]
XP_022976855.1	8.9e-103	92.54	uncharacterized protein LOC111477102 [Cucurbita maxima]	[more]
KGN53986.1	1.7e-101	91.04	hypothetical protein Csa_4G242860 [Cucumis sativus]	[more]

BLAST of Carg00297 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	1.5e-51	52.08	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Carg00297 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00297 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1I9\|A0A0A0L1I9_CUCSA	1.1e-101	91.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242860 PE=4 SV=1	[more]
tr\|M5WBE7\|M5WBE7_PRUPE	4.4e-58	57.36	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G014700 PE=4 SV=1	[more]
tr\|V4T9C5\|V4T9C5_9ROSI	2.2e-57	54.73	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003495mg PE=4 ...	[more]
tr\|A0A067DL89\|A0A067DL89_CITSI	2.2e-57	54.73	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029005mg PE=4 SV=1	[more]
tr\|A0A2H5PMF1\|A0A2H5PMF1_CITUN	1.4e-56	54.73	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_149860 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00297-RA	Carg00297-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 10..199
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 10..199

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00297	Cla023207	Watermelon (97103) v1	carwmB0672
Carg00297	Csa4G242860	Cucumber (Chinese Long) v2	carcuB0690
Carg00297	MELO3C010534	Melon (DHL92) v3.5.1	carmeB0673
Carg00297	ClCG11G016180	Watermelon (Charleston Gray)	carwcgB0647
Carg00297	CSPI04G12170	Wild cucumber (PI 183967)	carcpiB0702
Carg00297	CmaCh09G007560	Cucurbita maxima (Rimu)	carcmaB0932
Carg00297	CmaCh01G013510	Cucurbita maxima (Rimu)	carcmaB0947
Carg00297	CmoCh09G007470	Cucurbita moschata (Rifu)	carcmoB0906
Carg00297	CmoCh01G014040	Cucurbita moschata (Rifu)	carcmoB0922
Carg00297	Lsi04G018540	Bottle gourd (USVL1VR-Ls)	carlsiB612
Carg00297	Cp4.1LG06g05950	Cucurbita pepo (Zucchini)	carcpeB0947
Carg00297	Cp4.1LG02g02900	Cucurbita pepo (Zucchini)	carcpeB0943
Carg00297	CsaV3_4G014820	Cucumber (Chinese Long) v3	carcucB0703
Carg00297	Cla97C11G222120	Watermelon (97103) v2	carwmbB0692
Carg00297	Bhi09G002293	Wax gourd	carwgoB0789

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00297	Carg20071	Silver-seed gourd	carcarB574

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00297	Cucumber (Gy14) v2	carcgybB0665
Carg00297	Melon (DHL92) v3.6.1	carmedB0685