Csa4G095580 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G095580
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	AT4g39900/T5J17_70
Location	Chr4 : 6262226 .. 6266194 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACTCAACCTTGAAAGTAACTCTAACCAAACACACCTATTATCTAACGTCTATCTATTGCCCTGCTCTCTCTTGTAGTCCATCTATTCGTTTGATTTCTCGATGACTTTTTTGTAAGAGTCGAAGCCACAGCTGCGGACTCGATCTCTTCCACCTTCACAACAATGGTTGTTAATCAATGTAAGGTAATACTCTCTTCAATGCTCTCCAGCAAATCACTGAAAGCAAGTTTCAGTTAGCCCTTCTTCCTCTCCATTTCTTCTGGTAATTTTAAAGACTCTGATTTGGTCTTTCCGTTCGTGTTTTGCAAATTTCTGTTCTGTTGGAAGGTTTTTTTCTTTTTTTTGTTATTTTATCGTTTCATTTCCTTTCAGACTGCAGTTGTGTCGAATGGAGGTCTCCTTCAGGAAAAATTAGTGTAAGTTATTAGGCTTGACGAGGGGGGTGTCCTTCTTTAGGCATTTTTCTTGATTATACTTTGTAAGTTCTTTAATTGGTAGTTGCATGTTACTGATAATCAATTGTTGTGGTGGACTTTCTGAAATTTTGCTAATTCTCTTTGAGAAGGCTTCGTCCCCCTTCGAAAAATCTTCGCTAAGTTTTCTTTTTTTTTTTTATGGTGTATTGTTTTTCCACTATATTTTGGTATTCTCTCTTTATTAGTGGCAGCAACTTTTTGGAGCTCAGTTTTTTTTCTTCTTTTGGACATGAACATTGTTGTGTGGAAGAGGAATATAGCTAGGGCAAATTTAGCAATTAAAGAATTTTATGAAAGTAGAAATTTTTTAATTAGAACAAAACTAGCAATTACTACATTTATATTGAGTTAATCAGTTCTTAGATATCGACAAATACTTGATTGTTTTACATAATTCATAATTTTGATTGTCAATTATGGATCAAATCACGGACTAGATAACTTCAATTTCATCAAATTGTTATCTATAATCATTATCTTACTTTTACCATGTTGATTACCTTTTCATATATACATAAAAAAACAATGTTGATTGCTTTTGAAATAGTAAATTATGTTGTATAATATTTATTAGTTTCACACCTTTTTCTTTTAAAAAAAGAAAAAACTATCCTTGTTTAGAAACACTAAACAAAATCAACCCCACCCACCTCTCACTGCAAATTCCCTTCAAGGCACAATCTCTTACCTTTGTTGTATTCCTTTTCCTTTGCCCACAACCATCAGTACCCCAATCAGATTAATCTCCTATTCAAACATTATTGGATTCACCCATATTTTTCTATTGAATTTATTTTATTATATTTGATAAACATGTAGATCTCTTGAATTGTTCCTATCTAGCAAAAAAAAGTCATGATGACTTGTGGTTGTCATTTTCTTTTTCCTATTGGTCCTTAAAATTACATGTCTCTTCTTTATTACTATTTTTTTCCCTACACATTTGCCTCAGTTGAGATGACTCACACTGTACTATATATTTTAGAAAATAATTATGTTATATGTCTGGAGAGTTTCTTTTCAAATAATCTATATTTGTGCAGGCCCGTGATTCCTCTGGCTTTTTAAGTACTGAGGAATTGGACAACAACCCACAGTGTGATCCTCGTTTAACTTTCTTCAACTTCCTGGAAGTTACCCATTCAACAAAAAGTAGGATGTCATTGGAAACGTCAGATGCCCATGCTCGCTTGACTTGCCATAACGTAATTGATATACACGTGAATGGTGGAGATGTTCATTCCTCGTGCATAGTAAATATTGATATTGTCAAGGATAAGCTCAAACTATCTAAATCCTGTGACGGAACTTTTGAAAGTTTGAAAACTGAGAATACATTGGTGGTAAGTGAATTCGTCTATTTACTCACATTTTAGAGATGGTTTTTCCTTTTTAAAAAACTAAGACCAAGGATGGATTCATGATCATCATGACAATTTCAAAATCACGCCTAATCATAGCCTCTTAGATTTACATACTAAGGTGGTTTTTCTTGTGTTCTGTAATCTACATTTCTTACAGCGCATAGAGAAGGTACTGGAAAGACAGTCCAGTCTTAAAATGGGGGCGAAAGTTGTGCATTATTTGTTGAACCATGGACTAATGTTACTGAAGTTCTCGTCTAAAGGTAAACAACTTTCTCTAGAAAATCCCATCGAACAGGGTAAATATTTTTTTTCCCTCTATTTTCTTGAATTCATCATGTTTGTTTGGCCAATTTCCATGTCTCTCGGCTCAAGTGCCTAACTGGAGACACCTAGGTTCAAGAAAATTATAAAATATTTTATATTTCGATATTTTGGACTGTTGGTTGAGGTCTAAACCTCAAGAATATCCAGGATTTATATTTTTCGTTTGTAATCTGTAAGCCTATCTATTGAAGAAAATATGACATTTCTTATGAGATCATGATTTATCCCCTTATCAAGTCCGAATACTCCATAAATTTACCAAAGCCCACTTTCATGGCTAAATGTAACCATGATCTTTATTTTCTCCACCATAGATCTCTTCTAGAACCCTAAGGCTTTCAATAATTTCACATCAATGCTTTGAAGTTTTCTATCTATAAATATTCAGTGAACCAAAAAATTTGAGCAGGTGGATTATAGTAAATTTAATTTTTGGACTTGAAAATTTGTAGAAGACTTATTATGATTAACAATATTACAAAGGTACATTCTGCTCTTGTAACGATGTAAGATCACTACTAAACTCAAAATGTTATGTTGATAGGTTACAATAAATTTTATCTTTTATCGGTATTTTAACATCTATTCCTTGTGTGATTCGACAGAAAAATTAGGGACCGAAAGGGCTCATGATATGCCAAACATTAGGTGGAGGAAATATAAATGTTTTGCACTTGACTCAAGAAAGATTGTTATTCTCTTCTCGGTATTGTGAGTACCAAATTTCACATCTTGTCAAGCTTTTGGTTTCAACCTGAGTAATGAGTAGAATTTTGGGCATTCAACTTTAAGTAGCTACCCCAAATCGAAATAGTGAAATTTATCTATGAAGTCCAACACACAGGTGGCTTTTACTACATTGTTATTTACTATTGATACTATTGGAGTATTTAGAATATTTTTAGGAGATATTATTCTGCCGATTCTTTCTTGTATTCCTCATTTAGTATATTTAGGCTTGTACTCTTGCTAAATAATCAATAAAATAGATATTTATTCCAGAAAATCAACATGGTATGAGAGCTCTAGGTTTCTCGTCTCATTGAATCTAGCCCCCACATCCCTGTTCGATGTTTGCCTCCGTTGATCATTCGTCGATGGAGGCATAGCCATCCCCCATACCCGCTGCCCCTTAGATACTTTACGAACATATTCTTTCAATAACTCCGCCAAATAGTTCAAACCCGATTCAGTCAAATTGACACTTGGAAGTAAGTGTGTTTAAATATTTAAGGGTTAAGTATTCAAAAATCTTTTGATAAGATTTGAATATTGATTTTAGCACTTTTGGAATATTGGCCTTGTTTTTTCTCGTCTTTTTCTTTTTCCTTTTCCTTTGATAGAAAAATCAAGCTAAGTTTGACATCACTATCATCCTTGTAGATTAGCAATGTATTTCATACTTAAGAAAGCAATGCAAGTCAATATTTTAAAAAAATATAAATATAAAAGAAGTCAGATTTTGTTTATGAATCATATCTTCATTTGTGATTACAGGTCAAGCTTGGGAACCTTGATGTTGATATATTTGACTCTGAGAGTTAGGCAGCAGGGTGGAGATGGATCTGTTGCTATATAATTATAGTTTTGGTCTCTGGTTTTGTCTAATTTTCTCCATTCTCTCTTAAAATAGTTGATTTTTAAATCTTAATCTCTTTATAGAACATTTTTTTAGGCATGACTATTTATGTTTGTACATAAATGTCTTCTACTTGTGATTATGAACGCTCTAGAAATTAGTGAACTTGTGAAATTCGGATGAATCCTTGATGGAAATGTTAGCAGATTTTGAGTTTTAT

mRNA sequence

ATGTCATTGGAAACGTCAGATGCCCATGCTCGCTTGACTTGCCATAACGTAATTGATATACACGTGAATGGTGGAGATGTTCATTCCTCGTGCATAGTAAATATTGATATTGTCAAGGATAAGCTCAAACTATCTAAATCCTGTGACGGAACTTTTGAAAGTTTGAAAACTGAGAATACATTGGTGCGCATAGAGAAGGTACTGGAAAGACAGTCCAGTCTTAAAATGGGGGCGAAAGTTGTGCATTATTTGTTGAACCATGGACTAATGTTACTGAAGTTCTCGTCTAAAGAAAAATTAGGGACCGAAAGGGCTCATGATATGCCAAACATTAGGTGGAGGAAATATAAATGTTTTGCACTTGACTCAAGAAAGATTGTTATTCTCTTCTCGGTATTGTCAAGCTTGGGAACCTTGATGTTGATATATTTGACTCTGAGAGTTAGGCAGCAGGGTGGAGATGGATCTGTTGCTATATAA

Coding sequence (CDS)

ATGTCATTGGAAACGTCAGATGCCCATGCTCGCTTGACTTGCCATAACGTAATTGATATACACGTGAATGGTGGAGATGTTCATTCCTCGTGCATAGTAAATATTGATATTGTCAAGGATAAGCTCAAACTATCTAAATCCTGTGACGGAACTTTTGAAAGTTTGAAAACTGAGAATACATTGGTGCGCATAGAGAAGGTACTGGAAAGACAGTCCAGTCTTAAAATGGGGGCGAAAGTTGTGCATTATTTGTTGAACCATGGACTAATGTTACTGAAGTTCTCGTCTAAAGAAAAATTAGGGACCGAAAGGGCTCATGATATGCCAAACATTAGGTGGAGGAAATATAAATGTTTTGCACTTGACTCAAGAAAGATTGTTATTCTCTTCTCGGTATTGTCAAGCTTGGGAACCTTGATGTTGATATATTTGACTCTGAGAGTTAGGCAGCAGGGTGGAGATGGATCTGTTGCTATATAA

Protein sequence

MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENTLVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI*

Homology

[Close]

BLAST of Csa4G095580 vs. TrEMBL
Match: A0A0A0KVQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095580 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.8e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60
           MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT
Sbjct: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60

Query: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120
           LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA
Sbjct: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120

Query: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 160
           LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI
Sbjct: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 159

[Close]

BLAST of Csa4G095580 vs. TrEMBL
Match: D7T5J2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0665g00030 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 78/150 (52.00%), Postives = 104/150 (69.33%), Query Frame = 1


Query: 11  RLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENTLVRIEKVLER 70
           +L C + + + +   D +S C V++DI K  L+  KS + T  SLKTE  L  ++K L R
Sbjct: 114 QLNCKSCVGLQMESSDTYSPCTVDMDIEKGSLETPKSNEETMGSLKTEGVLTHLQKALRR 173

Query: 71  QSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYK-CFALDSRKIVIL 130
           Q S +MG K +  L+NHGLMLLKF+S++K  TER HD PN RWRKYK   + DSRK+V+ 
Sbjct: 174 QKSFQMGGKFLQLLMNHGLMLLKFTSRDKPVTERVHDTPNNRWRKYKRAASFDSRKVVLF 233

Query: 131 FSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 160
           FS+LSS+GT++LIYLTLRVRQ  GDG V +
Sbjct: 234 FSILSSMGTMILIYLTLRVRQI-GDGLVHV 262

[Close]

BLAST of Csa4G095580 vs. TrEMBL
Match: W9QDS2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022121 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-28
Identity = 68/151 (45.03%), Postives = 104/151 (68.87%), Query Frame = 1


Query: 10  ARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENTLVRIEKVLE 69
           A L C N ID  +   D +SSC+V+ID+ ++ L++ +S + T E LKTE+  + ++K L 
Sbjct: 113 AELNCQNCIDFQMTSADTYSSCVVDIDMERESLQVPESNEKTVEILKTESAPIHLQKALR 172

Query: 70  RQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYK-CFALDSRKIVI 129
           RQ+S+ +G K++  L+N+G      S ++K  T+R H++ N  WR+YK   + DSRKIV+
Sbjct: 173 RQASINVGEKLIQLLVNYGTT----SPRDK--TDRVHEVTNNHWRRYKRATSFDSRKIVL 232

Query: 130 LFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 160
           LFS+LSS+GTL+LIYLTL+VRQQ  DG + +
Sbjct: 233 LFSILSSVGTLVLIYLTLKVRQQIADGIIHV 257

[Close]

BLAST of Csa4G095580 vs. TrEMBL
Match: A0A067LED3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24035 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-27
Identity = 77/150 (51.33%), Postives = 97/150 (64.67%), Query Frame = 1


Query: 11  RLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENTLVRIEKVLER 70
           +L C N I + +   D +S CIV+I+I  +  +  KS D T  S+K+E  L     VL+R
Sbjct: 112 QLNCQNFIGLQMESADAYSPCIVDINIEMENFEKPKSNDETVGSIKSEGLLTG---VLQR 171

Query: 71  QSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA-LDSRKIVIL 130
           Q+SLK   + +  L N G  LLK  SK+K   ER HD+PN RWRKYK  A  DSRKIV+L
Sbjct: 172 QASLKTCGRFMQLLSNPGSTLLKLISKDKSFNERVHDIPNNRWRKYKRAAPFDSRKIVLL 231

Query: 131 FSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 160
           FS+LSSLGTL+LIYLTLRVRQ   DG V +
Sbjct: 232 FSILSSLGTLILIYLTLRVRQT-ADGFVNV 257

[Close]

BLAST of Csa4G095580 vs. TrEMBL
Match: U5G477_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s05430g PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-27
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1


Query: 10  ARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENTLVRIEKVLE 69
           A+ +CHN ID+ +   D +S C+V+IDI  + +   KS   T  S++ E+ L     V++
Sbjct: 115 AQFSCHNFIDLQMESEDSYSPCVVDIDIEMETIAKPKSGGITVGSIENEDPLTG---VVQ 174

Query: 70  RQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYK-CFALDSRKIVI 129
           RQ++LK   + +    NHG  LLK  SK+K  TER HD PN RWR+YK   + DSRKIV+
Sbjct: 175 RQANLKTCGRFMQLFTNHGSSLLKLISKDKSFTERVHDTPNNRWRRYKRASSFDSRKIVL 234

Query: 130 LFSVLSSLGTLMLIYLTLRVRQ 151
           LFS++SSLGTL+LIYLTLRVRQ
Sbjct: 235 LFSIMSSLGTLILIYLTLRVRQ 253

[Close]

BLAST of Csa4G095580 vs. TAIR10
Match: AT4G39900.1 (AT4G39900.1 unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.1e-20
Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = 1


Query: 10  ARLTCH---NVIDIHVNGGDVHSSCIVNIDIVKDKL-KLSKSCDGTFESLKTENTLVRIE 69
           A+L C    N I++ + G D + SC+V+I++ K    +   S D    S+K+E+  V ++
Sbjct: 111 AQLNCQKTQNRINVLLGGTDSYQSCVVDINVEKGNGGETVTSHDEVVASMKSES--VHMQ 170

Query: 70  KVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA-LDSR 129
           KVL+RQ+SL                     S +K  +ER HD P  RWR+YK  A  DSR
Sbjct: 171 KVLQRQASL---------------------STDKALSERCHDAPTNRWRRYKRAASFDSR 230

Query: 130 KIVILFSVLSSLGTLMLIYLTLRVRQQGGDGS 157
           KIVILFS+LSS+GTL+LIYLTLRV+Q G + +
Sbjct: 231 KIVILFSILSSVGTLILIYLTLRVKQNGDNNN 239

[Close]

BLAST of Csa4G095580 vs. NCBI nr
Match: gi|700198490|gb|KGN53648.1| (hypothetical protein Csa_4G095580 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 5.5e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60
           MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT
Sbjct: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60

Query: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120
           LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA
Sbjct: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120

Query: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 160
           LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI
Sbjct: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 159

[Close]

BLAST of Csa4G095580 vs. NCBI nr
Match: gi|778691787|ref|XP_011653351.1| (PREDICTED: uncharacterized protein LOC101221126 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 5.5e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60
           MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT
Sbjct: 46  MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 105

Query: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120
           LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA
Sbjct: 106 LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 165

Query: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 160
           LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI
Sbjct: 166 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 204

[Close]

BLAST of Csa4G095580 vs. NCBI nr
Match: gi|659111140|ref|XP_008455600.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X2 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.3e-72
Identity = 142/157 (90.45%), Postives = 149/157 (94.90%), Query Frame = 1


Query: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60
           MSLE SD+  RLTCHNVIDIHVNGGDVHSSCIVNIDI KDKLK SKSCDGTFES KTENT
Sbjct: 46  MSLEASDS--RLTCHNVIDIHVNGGDVHSSCIVNIDIDKDKLKPSKSCDGTFESSKTENT 105

Query: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120
           LVRIEKVL+RQSSLKMGAK+VHYLL+HGLMLLKFSSKEKLGTERAHD PNIRWRKY+C A
Sbjct: 106 LVRIEKVLQRQSSLKMGAKLVHYLLDHGLMLLKFSSKEKLGTERAHDTPNIRWRKYRCVA 165

Query: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSV 158
           LDSRKIVILFSVLSSLGTL+LIYLTLRVRQQGGDGS+
Sbjct: 166 LDSRKIVILFSVLSSLGTLILIYLTLRVRQQGGDGSI 200

[Close]

BLAST of Csa4G095580 vs. NCBI nr
Match: gi|659111138|ref|XP_008455598.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X1 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.3e-72
Identity = 142/157 (90.45%), Postives = 149/157 (94.90%), Query Frame = 1


Query: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60
           MSLE SD+  RLTCHNVIDIHVNGGDVHSSCIVNIDI KDKLK SKSCDGTFES KTENT
Sbjct: 56  MSLEASDS--RLTCHNVIDIHVNGGDVHSSCIVNIDIDKDKLKPSKSCDGTFESSKTENT 115

Query: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYKCFA 120
           LVRIEKVL+RQSSLKMGAK+VHYLL+HGLMLLKFSSKEKLGTERAHD PNIRWRKY+C A
Sbjct: 116 LVRIEKVLQRQSSLKMGAKLVHYLLDHGLMLLKFSSKEKLGTERAHDTPNIRWRKYRCVA 175

Query: 121 LDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSV 158
           LDSRKIVILFSVLSSLGTL+LIYLTLRVRQQGGDGS+
Sbjct: 176 LDSRKIVILFSVLSSLGTLILIYLTLRVRQQGGDGSI 210

[Close]

BLAST of Csa4G095580 vs. NCBI nr
Match: gi|659111142|ref|XP_008455601.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X3 [Cucumis melo])

HSP 1 Score: 169.9 bits (429), Expect = 3.7e-39
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60
           MSLE SD+  RLTCHNVIDIHVNGGDVHSSCIVNIDI KDKLK SKSCDGTFES KTENT
Sbjct: 56  MSLEASDS--RLTCHNVIDIHVNGGDVHSSCIVNIDIDKDKLKPSKSCDGTFESSKTENT 115

Query: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSK 98
           LVRIEKVL+RQSSLKMGAK+VHYLL+HGLMLLKFSSK
Sbjct: 116 LVRIEKVLQRQSSLKMGAKLVHYLLDHGLMLLKFSSK 150

The following BLAST results are available for this feature:

BLAST of Csa4G095580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVQ5_CUCSA	3.8e-83	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095580 PE=4 SV=1	[more]
D7T5J2_VITVI	3.3e-34	52.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0665g00030 PE=4 SV=...	[more]
W9QDS2_9ROSA	2.1e-28	45.03	Uncharacterized protein OS=Morus notabilis GN=L484_022121 PE=4 SV=1	[more]
A0A067LED3_JATCU	2.3e-27	51.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24035 PE=4 SV=1	[more]
U5G477_POPTR	3.0e-27	49.30	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s05430g PE=4 SV=1	[more]

BLAST of Csa4G095580 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39900.1	3.1e-20	42.11	unknown protein	[more]

BLAST of Csa4G095580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198490\|gb\|KGN53648.1\|	5.5e-83	100.00	hypothetical protein Csa_4G095580 [Cucumis sativus]	[more]
gi\|778691787\|ref\|XP_011653351.1\|	5.5e-83	100.00	PREDICTED: uncharacterized protein LOC101221126 [Cucumis sativus]	[more]
gi\|659111140\|ref\|XP_008455600.1\|	3.3e-72	90.45	PREDICTED: uncharacterized protein LOC103495734 isoform X2 [Cucumis melo]	[more]
gi\|659111138\|ref\|XP_008455598.1\|	3.3e-72	90.45	PREDICTED: uncharacterized protein LOC103495734 isoform X1 [Cucumis melo]	[more]
gi\|659111142\|ref\|XP_008455601.1\|	3.7e-39	89.69	PREDICTED: uncharacterized protein LOC103495734 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU096029	cucumber EST collection version 3.0	transcribed_cluster
CU102192	cucumber EST collection version 3.0	transcribed_cluster
CU123154	cucumber EST collection version 3.0	transcribed_cluster
CU132885	cucumber EST collection version 3.0	transcribed_cluster
CU150185	cucumber EST collection version 3.0	transcribed_cluster
CU164188	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G095580.1	Csa4G095580.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU102192	CU102192	transcribed_cluster
CU150185	CU150185	transcribed_cluster
CU096029	CU096029	transcribed_cluster
CU123154	CU123154	transcribed_cluster
CU132885	CU132885	transcribed_cluster
CU164188	CU164188	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34064	FAMILY NOT NAMED	coord: 10..152 score: 3.4
None	No IPR available	PANTHER	PTHR34064:SF5	SUBFAMILY NOT NAMED	coord: 10..152 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G095580	ClCG10G008980	Watermelon (Charleston Gray)	cuwcgB276
Csa4G095580	Lsi03G009250	Bottle gourd (USVL1VR-Ls)	culsiB281
Csa4G095580	Cla97C10G192170	Watermelon (97103) v2	cuwmbB276
Csa4G095580	Bhi11G000831	Wax gourd	cuwgoB361
Csa4G095580	CSPI04G08670	Wild cucumber (PI 183967)	cpicuB182
Csa4G095580	Cucsa.273050	Cucumber (Gy14) v1	cgycuB389
Csa4G095580	CmaCh04G008260	Cucurbita maxima (Rimu)	cmacuB711
Csa4G095580	CmaCh16G007110	Cucurbita maxima (Rimu)	cmacuB335
Csa4G095580	CmoCh16G007680	Cucurbita moschata (Rifu)	cmocuB323
Csa4G095580	Cp4.1LG14g00990	Cucurbita pepo (Zucchini)	cpecuB220
Csa4G095580	Cp4.1LG01g09180	Cucurbita pepo (Zucchini)	cpecuB404
Csa4G095580	CsGy4G008500	Cucumber (Gy14) v2	cgybcuB165
Csa4G095580	Carg05826	Silver-seed gourd	carcuB1032
Csa4G095580	Carg14226	Silver-seed gourd	carcuB0956

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G095580	Cucurbita moschata (Rifu)	cmocuB703
Csa4G095580	Melon (DHL92) v3.5.1	cumeB303
Csa4G095580	Watermelon (97103) v1	cuwmB294
Csa4G095580	Melon (DHL92) v3.6.1	cumedB288