CmaCh04G008260 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G008260
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPotassium channel subfamily K member 10
LocationCma_Chr04 : 4225450 .. 4229349 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGCGCTCCGACTCCCGATTCCGATGTAACGTCTATATATCTATAACCCTTTTCTCTCTGGTTCATTTGAGTTTTCAATGGCTTTTTAATTGGCCGAGGCCACAGCGGGGGACTCAATCTCTACCTTCGCAGCAATGGCTGTTAATCACTGTCAGGTAATTGGTATTTCCCGTAGATTTTAGTCGCAAGTTCCAATTAGCACTAAAGTTTAAGGCTCGTTAATTTGGTTTCTCCGATCGTACTTCACTTATTTCTTTTGTTTGATTCGAAATGAGAATCTGGAGATTCGTTTTCGTTTAAGTCTTGTAAGTCTGTAATCTATGTATGCATTTTGATTTAGCAACCGCTTTTGATAATGCATTTACCTTTTGCGTCTCTTTCCAGGCTGCAGCTCTATCAAATGGAGTTCACGTTCAAGAAAAACTTGCGAAAGTTACTAGATTCGACGAGACGGAGCGCCATAGTTCTTTAGGTATTTTTATTAATTACATTTTGTTTGTTCAGTAACCGGTAGTTTTAGACTTCCAGTTGCATGTTACTGATAAATAATTGTTATCGCCGTTCAGAAATTTTGCCAAGTCTCTTTGATAAGGCTTCGTTCCCCTCTCAAGATTCTTTGGTAAGTTTGATTTTTATGGTTCATTGATTTTCCACTATATTTTGGTCTTCTTTCTCTCTATTAGTGGTAATGACTTGATGGAGCTCAAATTTTTCTTCTTTTGGACATGGCGCTGAGACCATTGCTATATGCAGAAGACTACAATTAGGCAGATGTATTTATTTAAGAATTTTATGATAGTAGCCGATATGAATTTTTTTTTTATCTGAACGAAACTAGGAAATAATACATTTCGATTTTTAGCTAAACGATTATTAGTCAATTATACATCAAATCACTGACTAGCTAACTTTAATTTCATGTAATTATTATCTAATTTTACCATGTTGGTTACCTTTTATTTTCTAAAGCAATGTTGGTTACTTTTATAATAGTTAATTATGGTCGAATATTTTTCTTAGTTTTTTTTTTTCTGTAAAAAGCAAAAAGAAATCAACCCACCCACAAAATTCCCTTACAACTAACAGGCAATTCTCCTACTTTTGTTGTATTCCATTGCCCATAACCATTAGTACCAATCAGATTATTCTCCTATTCGAACATAATTGGCTTCGCCCCGTATTTGTCCGTGTAGTCTATTTCCATTGAATTTGTTTGTATTACAACTAATAAATATAAAGGTTTTTTTGAATTTTTTTTATTCTAATAAAAAGAATTGTTTTGTAACAAATCCTATTTATTTGTTGTATCGTTCTCTTTTTCCTATTTGGCATTTGAAATAATTCTCGACTCTGTAACTTTTTGCCTTTTTGTTTATTTTTTTTCTTATTGGGAAGAAATTTACTGCAGTTGAAGATTCACACTGTACTAATTTTTATTTTTTAACAGTTCTATATATATCTTGAGAATTTCTTTTAAATAATTTTCATTTGTTCAGGCCCGTGATTCCTCTGGCTTTTTAAGTACCGAGGAACTCGACAACAGTCCAGATTGTGATCCACATTTAGCTTTTCTCAGCTTCCTGGAAGTTACCCATCCAACAAATAGTAAGATGTCATTGGCAACTTCAGATGCCAGCTTGACTTGCCAGAACGTTATTGACATACATGTGAATGGTGGAGATGCTTATTCCTCGTGCATAGTAAATATTGATATTGACAAGGACAAGCTCAAAACGCCTAAATCATGTGAAGGAACTTTTGAAAGTTTGAAAACTGAAAATACATTATTGGTAAGTGAACACATTTATTTACACATGTTGTAGAGTTGGGGTCTCCTTAAAAACAAAAAAGAACTCAAAGGAAGACCAAAGATGGATGCATGATCCTAAAATAAATTAATAATAGTGTGGGCAGAAATCAACTTGCCACACGTGTATGAGTTAATAGTTACACACTGAAATGGTTTTTCTTGTGATCTTCTGTATTGTGACGTACTATTTCATCTCTTACAGCGAATAGAGAAGGTATTGCAGAGACAGTCCAGCCTTAAAATGGGTGTGAAACTTGTGCATTATTTGTTAGACCATGGACTAATGTTACTGAAGTTCTCGTCCAAAGGTATGATTATCTATCCTTCACCAGGGTAAAAACTTTCTTTGTTTTCTTTGTAAAAATTATCTTGGTGGTTGGGGCTAGTTTCTGTACATCATGACTTATCCCAATTGTCTAAGTGACAAGTGCCTAACTCGGGAACACCTAGGTTCAAGAACCTTATAAGACATTTAATATTTTGACAGGTTGGACCATTGCCTGAGGTCTTAACCTCAAGGATATTCAGGATTTATATTTTCTTCTTTTGTGGTGTACCTATGCCTATCCATTGAACAATAGACATGTCTCTTCTGACTTTGATTTTATCCCCTGGCTTTGTGAATCCAAACACTTGATTGTTTGCAAGAGTTGTCTCCTTCCATAAATTTAATTGTAATCACGATCTTTATTTTCCCCATTAATATCTGTCCCATGAAACTAACTACCATAAGAAGCTTGCCTGAATATGTCATGTAAACAATAATATGACTTAGAGGAGATGAGTTCAAGCCACCTTCTACCTACTTAAAATCTATTACCTATGAACTATTTTGTCAACCAAATGTAGTATGCTTAGATGATTGTTCAATATATTAAAATTGAAAAAGGAGACCGAAATTGCACCAGTGCAAGAGCAGCAAGAGATGGCAAACTTGATGATGTCTTGAATGTTTACCACTTAATTCTGAACTTTTATTTCTTGTGTTTGATTTAACAGAAAAATCAGGGACCGAGAGGGTTCATGATACGCCAAACAACAGGTGGAGAAAATATAAACGTGCCGCTTCATTTGATTCAAGAAAGATAGTTATTCTCTTCTCAGTATTGTAAGTACCCGAGTCTCAATTCTTTTTAATCTAAACCCAGTCCCAATACTGAGTATAATTTTGGGCCTTTTAAGTAGATGCACACCATTACAAAAGAATACAGTTCATCTTTGGAAATTTCAGAACATAAGTGGCTTTTACCTTAGTGCTATTTGCTATAGATCCTTTGCATTTTATGATTTGAACATGTCCTTTCAATAACTTCGTCAAATAATTTTCGCTTCCTATTACACATCCCAGCTGTTAACTCTACTGACCCTTTGAAGAAAGTGCCTTTAAATATTAAATATTTAAGAGTACTTTTAAATATTCTTAAATCTCTTGATAAGTTCTGTAAATTGTTTTTTAGCACTTCAGAATATTTTCCTTTTTTTCTTTTCTTCTTTTTCTTTTTCTTTATCTTTTTTCCAGAAAATAATGATTTTTTTTATATCGACTTTCATCCAGGCAGAACGACAGGATCCAGTTTTAGCACTGCCAAAACTGTTTCATACATAGGATATTAATGCCGCTCTATTTTTTTAAATAAATAAACCCAAAAGTAACACTAGCAATAATGATTCTTTAATATCAGATTTGTTTTAATTCCCTTTTTGTTTAATTACAGATCAAGCTTGGGAACCTTGATATTGATATATTTGACTCTGAGAGTAAGGCAGCAGAGTGATGGATCTGTTGCTATGTAACAGTTTTTGGTCTCTGGTTTTGTATCGCTCTTCTCCTTTGCCTTTCTAGTCTCTTAAAATAGTTGGTTTTAATGTTTATCTCCTCATAGAACACACTTTTAGGCATGCGACTGTTATTATTTGTACATAAATGTATTCCAATTTCGGGTTGCCTTAGGAAATGATCAGTAGTGAATGTGTTGTGGCATTGGGATGGTAGGAATGTTGGTAAAAGTACTGATGTGAATGAAAAATTATGAAAATTCAGAAAGTGTTGTGGCATTGGGATGATAGGAATGTTGGTAAAAGTACCG

mRNA sequence

AAAAAGCGCTCCGACTCCCGATTCCGATGTAACGTCTATATATCTATAACCCTTTTCTCTCTGGTTCATTTGAGTTTTCAATGGCTTTTTAATTGGCCGAGGCCACAGCGGGGGACTCAATCTCTACCTTCGCAGCAATGGCTGTTAATCACTGTCAGGCTGCAGCTCTATCAAATGGAGTTCACGTTCAAGAAAAACTTGCGAAAGTTACTAGATTCGACGAGACGGAGCGCCATAGTTCTTTAGAAATTTTGCCAAGTCTCTTTGATAAGGCTTCGTTCCCCTCTCAAGATTCTTTGGCCCGTGATTCCTCTGGCTTTTTAAGTACCGAGGAACTCGACAACAGTCCAGATTGTGATCCACATTTAGCTTTTCTCAGCTTCCTGGAAGTTACCCATCCAACAAATAGTAAGATGTCATTGGCAACTTCAGATGCCAGCTTGACTTGCCAGAACGTTATTGACATACATGTGAATGGTGGAGATGCTTATTCCTCGTGCATAGTAAATATTGATATTGACAAGGACAAGCTCAAAACGCCTAAATCATGTGAAGGAACTTTTGAAAGTTTGAAAACTGAAAATACATTATTGCGAATAGAGAAGGTATTGCAGAGACAGTCCAGCCTTAAAATGGGTGTGAAACTTGTGCATTATTTGTTAGACCATGGACTAATGTTACTGAAGTTCTCGTCCAAAGAAAAATCAGGGACCGAGAGGGTTCATGATACGCCAAACAACAGGTGGAGAAAATATAAACGTGCCGCTTCATTTGATTCAAGAAAGATAGTTATTCTCTTCTCAGTATTATCAAGCTTGGGAACCTTGATATTGATATATTTGACTCTGAGAGTAAGGCAGCAGAGTGATGGATCTGTTGCTATGTAACAGTTTTTGGTCTCTGGTTTTGTATCGCTCTTCTCCTTTGCCTTTCTAGTCTCTTAAAATAGTTGGTTTTAATGTTTATCTCCTCATAGAACACACTTTTAGGCATGCGACTGTTATTATTTGTACATAAATGTATTCCAATTTCGGGTTGCCTTAGGAAATGATCAGTAGTGAATGTGTTGTGGCATTGGGATGGTAGGAATGTTGGTAAAAGTACTGATGTGAATGAAAAATTATGAAAATTCAGAAAGTGTTGTGGCATTGGGATGATAGGAATGTTGGTAAAAGTACCG

Coding sequence (CDS)

ATGGCTGTTAATCACTGTCAGGCTGCAGCTCTATCAAATGGAGTTCACGTTCAAGAAAAACTTGCGAAAGTTACTAGATTCGACGAGACGGAGCGCCATAGTTCTTTAGAAATTTTGCCAAGTCTCTTTGATAAGGCTTCGTTCCCCTCTCAAGATTCTTTGGCCCGTGATTCCTCTGGCTTTTTAAGTACCGAGGAACTCGACAACAGTCCAGATTGTGATCCACATTTAGCTTTTCTCAGCTTCCTGGAAGTTACCCATCCAACAAATAGTAAGATGTCATTGGCAACTTCAGATGCCAGCTTGACTTGCCAGAACGTTATTGACATACATGTGAATGGTGGAGATGCTTATTCCTCGTGCATAGTAAATATTGATATTGACAAGGACAAGCTCAAAACGCCTAAATCATGTGAAGGAACTTTTGAAAGTTTGAAAACTGAAAATACATTATTGCGAATAGAGAAGGTATTGCAGAGACAGTCCAGCCTTAAAATGGGTGTGAAACTTGTGCATTATTTGTTAGACCATGGACTAATGTTACTGAAGTTCTCGTCCAAAGAAAAATCAGGGACCGAGAGGGTTCATGATACGCCAAACAACAGGTGGAGAAAATATAAACGTGCCGCTTCATTTGATTCAAGAAAGATAGTTATTCTCTTCTCAGTATTATCAAGCTTGGGAACCTTGATATTGATATATTTGACTCTGAGAGTAAGGCAGCAGAGTGATGGATCTGTTGCTATGTAA

Protein sequence

MAVNHCQAAALSNGVHVQEKLAKVTRFDETERHSSLEILPSLFDKASFPSQDSLARDSSGFLSTEELDNSPDCDPHLAFLSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCEGTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTPNNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDGSVAM
Homology
[Close]
BLAST of CmaCh04G008260 vs. TrEMBL
Match: A0A0A0KVQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095580 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.1e-60
Identity = 131/160 (81.88%), Postives = 140/160 (87.50%), Query Frame = 1 

Query: 93  MSLATSDAS--LTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCEGTFESLKTENT 152
           MSL TSDA   LTC NVIDIHVNGGD +SSCIVNIDI KDKLK  KSC+GTFESLKTENT
Sbjct: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60

Query: 153 LLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTPNNRWRKYKRAA 212
           L+RIEKVL+RQSSLKMG K+VHYLL+HGLMLLKFSSKEK GTER HD PN RWRKYK   
Sbjct: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYK-CF 120

Query: 213 SFDSRKIVILFSVLSSLGTLILIYLTLRVRQQ-SDGSVAM 250
           + DSRKIVILFSVLSSLGTL+LIYLTLRVRQQ  DGSVA+
Sbjct: 121 ALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 159

[Close]
BLAST of CmaCh04G008260 vs. TrEMBL
Match: D7T5J2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0665g00030 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 122/228 (53.51%), Postives = 159/228 (69.74%), Query Frame = 1 

Query: 28  DETERHSSLEILPSLFDKASFPSQ------DSLARD--SSGFLSTEELDNSPDCDPHLAF 87
           DE   H SL++LP LFD ASFP +      +S  +D  S   L  + + N P C+P +AF
Sbjct: 37  DEINPHCSLDVLPVLFDDASFPVRLKCPFHNSQGQDVYSISVLPDDGITN-PQCEPQIAF 96

Query: 88  LSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCE 147
           L+FLEV++P  S+M     D  L C++ + + +   D YS C V++DI+K  L+TPKS E
Sbjct: 97  LNFLEVSNPFKSQMC---PDTQLNCKSCVGLQMESSDTYSPCTVDMDIEKGSLETPKSNE 156

Query: 148 GTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTP 207
            T  SLKTE  L  ++K L+RQ S +MG K +  L++HGLMLLKF+S++K  TERVHDTP
Sbjct: 157 ETMGSLKTEGVLTHLQKALRRQKSFQMGGKFLQLLMNHGLMLLKFTSRDKPVTERVHDTP 216

Query: 208 NNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDGSV 248
           NNRWRKYKRAASFDSRK+V+ FS+LSS+GT+ILIYLTLRVRQ  DG V
Sbjct: 217 NNRWRKYKRAASFDSRKVVLFFSILSSMGTMILIYLTLRVRQIGDGLV 260

[Close]
BLAST of CmaCh04G008260 vs. TrEMBL
Match: U5G477_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s05430g PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.8e-46
Identity = 113/228 (49.56%), Postives = 150/228 (65.79%), Query Frame = 1 

Query: 27  FDETERHSSLEILPSLFDKASFPSQDSLA-RDSSG------FLSTEELDNSPDCDPHLAF 86
           FDE  +H SL+ LP + D+ASFP ++  A R+S G       + +EE   +      LAF
Sbjct: 38  FDEVTQHCSLDALPIIIDEASFPVEEKCAFRNSHGQDVFDFSMLSEESKTTSQFTSQLAF 97

Query: 87  LSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCE 146
           LSF+E+  P   +M L   DA  +C N ID+ +   D+YS C+V+IDI+ + +  PKS  
Sbjct: 98  LSFVELPLPPKKQMCL---DAQFSCHNFIDLQMESEDSYSPCVVDIDIEMETIAKPKSGG 157

Query: 147 GTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTP 206
            T  S++ E+ L     V+QRQ++LK   + +    +HG  LLK  SK+KS TERVHDTP
Sbjct: 158 ITVGSIENEDPLTG---VVQRQANLKTCGRFMQLFTNHGSSLLKLISKDKSFTERVHDTP 217

Query: 207 NNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDGSV 248
           NNRWR+YKRA+SFDSRKIV+LFS++SSLGTLILIYLTLRVRQ  DG V
Sbjct: 218 NNRWRRYKRASSFDSRKIVLLFSIMSSLGTLILIYLTLRVRQTVDGYV 259

[Close]
BLAST of CmaCh04G008260 vs. TrEMBL
Match: A0A067LED3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24035 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 116/229 (50.66%), Postives = 146/229 (63.76%), Query Frame = 1 

Query: 27  FDETERHSSLEILPSLFDKASFPSQDSLARD--------SSGFLSTEELDNSPDCDPHLA 86
           FDE  +  +L++LP LF++ASFP +   A          S   LS E+  NS  C   LA
Sbjct: 34  FDEVNQQCTLDVLPLLFEEASFPMEKKCAFQTQHGQDVYSISMLSEEDKVNSK-CTSQLA 93

Query: 87  FLSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSC 146
            LSF+E+  P + K  +   D  L CQN I + +   DAYS CIV+I+I+ +  + PKS 
Sbjct: 94  LLSFVEL--PVSPKKQICL-DPQLNCQNFIGLQMESADAYSPCIVDINIEMENFEKPKSN 153

Query: 147 EGTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDT 206
           + T  S+K+E  L     VLQRQ+SLK   + +  L + G  LLK  SK+KS  ERVHD 
Sbjct: 154 DETVGSIKSEGLL---TGVLQRQASLKTCGRFMQLLSNPGSTLLKLISKDKSFNERVHDI 213

Query: 207 PNNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDGSV 248
           PNNRWRKYKRAA FDSRKIV+LFS+LSSLGTLILIYLTLRVRQ +DG V
Sbjct: 214 PNNRWRKYKRAAPFDSRKIVLLFSILSSLGTLILIYLTLRVRQTADGFV 255

[Close]
BLAST of CmaCh04G008260 vs. TrEMBL
Match: V4UPL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026269mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.9e-44
Identity = 110/226 (48.67%), Postives = 141/226 (62.39%), Query Frame = 1 

Query: 27  FDETERHSSLEILPSLFDKASFPSQDSLARDSSGFLST-------EELDNSPDCDPHLAF 86
           FDE   H SL++LP L ++ASFP +      SS            +E + SP+C   L F
Sbjct: 37  FDEVNHHCSLDVLPILIEEASFPEKQECPFHSSHVQDVYGISVLPDEGNTSPNCTSQLTF 96

Query: 87  LSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCE 146
           LSFLEV  P+ S+ SL   D  L C   ID+ +   DAYSSCIV+I+I+K+ L+T KS +
Sbjct: 97  LSFLEVPFPSKSRTSL---DTQLDCHKCIDLQMKSADAYSSCIVDINIEKENLETLKSND 156

Query: 147 GTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTP 206
            TF S+K+E   + ++KVLQRQ+SL +                     +KS TER HD P
Sbjct: 157 ETFGSIKSEG--VHMQKVLQRQASLNI---------------------DKSPTERTHDAP 216

Query: 207 NNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDG 246
            NRWR+Y+RAASFDSRK+V+LFS+LSSLGTLILIYLTLRVRQ  DG
Sbjct: 217 TNRWRRYRRAASFDSRKVVLLFSILSSLGTLILIYLTLRVRQNGDG 236

[Close]
BLAST of CmaCh04G008260 vs. TAIR10
Match: AT4G39900.1 (AT4G39900.1 unknown protein)

HSP 1 Score: 148.3 bits (373), Expect = 6.3e-36
Identity = 97/238 (40.76%), Postives = 142/238 (59.66%), Query Frame = 1 

Query: 20  KLAKVTRFDETERHSSLEILPSLFDKASFPSQDSLARDSSGFLST-------EELDNSPD 79
           KL K T F +T +HS++++ P L  +A+FP ++    D+S            +E +  P 
Sbjct: 28  KLPKST-FGDTGKHSAIDVFPLLVKEAAFPLKEDRDIDTSLVQDVCTISVLPDEGNTIPQ 87

Query: 80  CDPHLAFLSFLEVTHPTNSKMSLATSDASLTCQ---NVIDIHVNGGDAYSSCIVNIDIDK 139
           C  H   LSF++   P+ ++M +   DA L CQ   N I++ + G D+Y SC+V+I+++K
Sbjct: 88  CTSHFTLLSFVKALLPSKNQMLI---DAQLNCQKTQNRINVLLGGTDSYQSCVVDINVEK 147

Query: 140 DKL-KTPKSCEGTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKE 199
               +T  S +    S+K+E+  + ++KVLQRQ+SL                     S +
Sbjct: 148 GNGGETVTSHDEVVASMKSES--VHMQKVLQRQASL---------------------STD 207

Query: 200 KSGTERVHDTPNNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDGS 247
           K+ +ER HD P NRWR+YKRAASFDSRKIVILFS+LSS+GTLILIYLTLRV+Q  D +
Sbjct: 208 KALSERCHDAPTNRWRRYKRAASFDSRKIVILFSILSSVGTLILIYLTLRVKQNGDNN 238

[Close]
BLAST of CmaCh04G008260 vs. NCBI nr
Match: gi|659111138|ref|XP_008455598.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X1 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 4.7e-81
Identity = 163/202 (80.69%), Postives = 175/202 (86.63%), Query Frame = 1 

Query: 47  SFPSQDSLARDSSGFLSTEELDNSPDCDPHLAFLSFLEVTHPTNSKMSLATSDASLTCQN 106
           S PS+ + ARDSS F STEELDN+P C PHL+FL+FLEVTH T S+MSL  SD+ LTC N
Sbjct: 10  SSPSRKTSARDSSSFSSTEELDNNPQCHPHLSFLNFLEVTHSTKSRMSLEASDSRLTCHN 69

Query: 107 VIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCEGTFESLKTENTLLRIEKVLQRQSSLKM 166
           VIDIHVNGGD +SSCIVNIDIDKDKLK  KSC+GTFES KTENTL+RIEKVLQRQSSLKM
Sbjct: 70  VIDIHVNGGDVHSSCIVNIDIDKDKLKPSKSCDGTFESSKTENTLVRIEKVLQRQSSLKM 129

Query: 167 GVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTPNNRWRKYKRAASFDSRKIVILFSVLSS 226
           G KLVHYLLDHGLMLLKFSSKEK GTER HDTPN RWRKY R  + DSRKIVILFSVLSS
Sbjct: 130 GAKLVHYLLDHGLMLLKFSSKEKLGTERAHDTPNIRWRKY-RCVALDSRKIVILFSVLSS 189

Query: 227 LGTLILIYLTLRVRQQ-SDGSV 248
           LGTLILIYLTLRVRQQ  DGS+
Sbjct: 190 LGTLILIYLTLRVRQQGGDGSI 210

[Close]
BLAST of CmaCh04G008260 vs. NCBI nr
Match: gi|659111140|ref|XP_008455600.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X2 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 6.7e-80
Identity = 160/194 (82.47%), Postives = 170/194 (87.63%), Query Frame = 1 

Query: 55  ARDSSGFLSTEELDNSPDCDPHLAFLSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNG 114
           ARDSS F STEELDN+P C PHL+FL+FLEVTH T S+MSL  SD+ LTC NVIDIHVNG
Sbjct: 8   ARDSSSFSSTEELDNNPQCHPHLSFLNFLEVTHSTKSRMSLEASDSRLTCHNVIDIHVNG 67

Query: 115 GDAYSSCIVNIDIDKDKLKTPKSCEGTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYL 174
           GD +SSCIVNIDIDKDKLK  KSC+GTFES KTENTL+RIEKVLQRQSSLKMG KLVHYL
Sbjct: 68  GDVHSSCIVNIDIDKDKLKPSKSCDGTFESSKTENTLVRIEKVLQRQSSLKMGAKLVHYL 127

Query: 175 LDHGLMLLKFSSKEKSGTERVHDTPNNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIY 234
           LDHGLMLLKFSSKEK GTER HDTPN RWRKY R  + DSRKIVILFSVLSSLGTLILIY
Sbjct: 128 LDHGLMLLKFSSKEKLGTERAHDTPNIRWRKY-RCVALDSRKIVILFSVLSSLGTLILIY 187

Query: 235 LTLRVRQQ-SDGSV 248
           LTLRVRQQ  DGS+
Sbjct: 188 LTLRVRQQGGDGSI 200

[Close]
BLAST of CmaCh04G008260 vs. NCBI nr
Match: gi|778691787|ref|XP_011653351.1| (PREDICTED: uncharacterized protein LOC101221126 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 8.2e-78
Identity = 160/198 (80.81%), Postives = 172/198 (86.87%), Query Frame = 1 

Query: 55  ARDSSGFLSTEELDNSPDCDPHLAFLSFLEVTHPTNSKMSLATSDAS--LTCQNVIDIHV 114
           ARDSSGFLSTEELDN+P CDP L F +FLEVTH T S+MSL TSDA   LTC NVIDIHV
Sbjct: 8   ARDSSGFLSTEELDNNPQCDPRLTFFNFLEVTHSTKSRMSLETSDAHARLTCHNVIDIHV 67

Query: 115 NGGDAYSSCIVNIDIDKDKLKTPKSCEGTFESLKTENTLLRIEKVLQRQSSLKMGVKLVH 174
           NGGD +SSCIVNIDI KDKLK  KSC+GTFESLKTENTL+RIEKVL+RQSSLKMG K+VH
Sbjct: 68  NGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENTLVRIEKVLERQSSLKMGAKVVH 127

Query: 175 YLLDHGLMLLKFSSKEKSGTERVHDTPNNRWRKYKRAASFDSRKIVILFSVLSSLGTLIL 234
           YLL+HGLMLLKFSSKEK GTER HD PN RWRKYK   + DSRKIVILFSVLSSLGTL+L
Sbjct: 128 YLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYK-CFALDSRKIVILFSVLSSLGTLML 187

Query: 235 IYLTLRVRQQ-SDGSVAM 250
           IYLTLRVRQQ  DGSVA+
Sbjct: 188 IYLTLRVRQQGGDGSVAI 204

[Close]
BLAST of CmaCh04G008260 vs. NCBI nr
Match: gi|700198490|gb|KGN53648.1| (hypothetical protein Csa_4G095580 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 1.0e-59
Identity = 131/160 (81.88%), Postives = 140/160 (87.50%), Query Frame = 1 

Query: 93  MSLATSDAS--LTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCEGTFESLKTENT 152
           MSL TSDA   LTC NVIDIHVNGGD +SSCIVNIDI KDKLK  KSC+GTFESLKTENT
Sbjct: 1   MSLETSDAHARLTCHNVIDIHVNGGDVHSSCIVNIDIVKDKLKLSKSCDGTFESLKTENT 60

Query: 153 LLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTPNNRWRKYKRAA 212
           L+RIEKVL+RQSSLKMG K+VHYLL+HGLMLLKFSSKEK GTER HD PN RWRKYK   
Sbjct: 61  LVRIEKVLERQSSLKMGAKVVHYLLNHGLMLLKFSSKEKLGTERAHDMPNIRWRKYK-CF 120

Query: 213 SFDSRKIVILFSVLSSLGTLILIYLTLRVRQQ-SDGSVAM 250
           + DSRKIVILFSVLSSLGTL+LIYLTLRVRQQ  DGSVA+
Sbjct: 121 ALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 159

[Close]
BLAST of CmaCh04G008260 vs. NCBI nr
Match: gi|359497194|ref|XP_003635450.1| (PREDICTED: uncharacterized protein LOC100853798 isoform X1 [Vitis vinifera])

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-55
Identity = 122/228 (53.51%), Postives = 159/228 (69.74%), Query Frame = 1 

Query: 28  DETERHSSLEILPSLFDKASFPSQ------DSLARD--SSGFLSTEELDNSPDCDPHLAF 87
           DE   H SL++LP LFD ASFP +      +S  +D  S   L  + + N P C+P +AF
Sbjct: 37  DEINPHCSLDVLPVLFDDASFPVRLKCPFHNSQGQDVYSISVLPDDGITN-PQCEPQIAF 96

Query: 88  LSFLEVTHPTNSKMSLATSDASLTCQNVIDIHVNGGDAYSSCIVNIDIDKDKLKTPKSCE 147
           L+FLEV++P  S+M     D  L C++ + + +   D YS C V++DI+K  L+TPKS E
Sbjct: 97  LNFLEVSNPFKSQMC---PDTQLNCKSCVGLQMESSDTYSPCTVDMDIEKGSLETPKSNE 156

Query: 148 GTFESLKTENTLLRIEKVLQRQSSLKMGVKLVHYLLDHGLMLLKFSSKEKSGTERVHDTP 207
            T  SLKTE  L  ++K L+RQ S +MG K +  L++HGLMLLKF+S++K  TERVHDTP
Sbjct: 157 ETMGSLKTEGVLTHLQKALRRQKSFQMGGKFLQLLMNHGLMLLKFTSRDKPVTERVHDTP 216

Query: 208 NNRWRKYKRAASFDSRKIVILFSVLSSLGTLILIYLTLRVRQQSDGSV 248
           NNRWRKYKRAASFDSRK+V+ FS+LSS+GT+ILIYLTLRVRQ  DG V
Sbjct: 217 NNRWRKYKRAASFDSRKVVLFFSILSSMGTMILIYLTLRVRQIGDGLV 260

The following BLAST results are available for this feature:
BLAST of CmaCh04G008260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G008260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVQ5_CUCSA7.1e-6081.88Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095580 PE=4 SV=1[more]
D7T5J2_VITVI1.8e-5553.51Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0665g00030 PE=4 SV=... [more]
U5G477_POPTR5.8e-4649.56Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s05430g PE=4 SV=1[more]
A0A067LED3_JATCU1.4e-4450.66Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24035 PE=4 SV=1[more]
V4UPL2_9ROSI1.9e-4448.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026269mg PE=4 SV=1[more]
BLAST of CmaCh04G008260 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39900.16.3e-3640.76 unknown protein[more]
BLAST of CmaCh04G008260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111138|ref|XP_008455598.1|4.7e-8180.69PREDICTED: uncharacterized protein LOC103495734 isoform X1 [Cucumis melo][more]
gi|659111140|ref|XP_008455600.1|6.7e-8082.47PREDICTED: uncharacterized protein LOC103495734 isoform X2 [Cucumis melo][more]
gi|778691787|ref|XP_011653351.1|8.2e-7880.81PREDICTED: uncharacterized protein LOC101221126 [Cucumis sativus][more]
gi|700198490|gb|KGN53648.1|1.0e-5981.88hypothetical protein Csa_4G095580 [Cucumis sativus][more]
gi|359497194|ref|XP_003635450.1|2.6e-5553.51PREDICTED: uncharacterized protein LOC100853798 isoform X1 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G008260.1CmaCh04G008260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34064FAMILY NOT NAMEDcoord: 26..247
score: 5.4
NoneNo IPR availablePANTHERPTHR34064:SF5SUBFAMILY NOT NAMEDcoord: 26..247
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G008260Cucsa.273050Cucumber (Gy14) v1cgycmaB0767
CmaCh04G008260Csa4G095580Cucumber (Chinese Long) v2cmacuB711
CmaCh04G008260ClCG10G008980Watermelon (Charleston Gray)cmawcgB614
CmaCh04G008260CSPI04G08670Wild cucumber (PI 183967)cmacpiB717
CmaCh04G008260CmoCh16G007680Cucurbita moschata (Rifu)cmacmoB700
CmaCh04G008260Lsi03G009250Bottle gourd (USVL1VR-Ls)cmalsiB664
CmaCh04G008260Cp4.1LG01g09180Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G008260Cp4.1LG14g00990Cucurbita pepo (Zucchini)cmacpeB714
CmaCh04G008260CsaV3_4G008880Cucumber (Chinese Long) v3cmacucB0845
CmaCh04G008260Cla97C10G192170Watermelon (97103) v2cmawmbB718
CmaCh04G008260Bhi11G000831Wax gourdcmawgoB0822
CmaCh04G008260CsGy4G008500Cucumber (Gy14) v2cgybcmaB544
CmaCh04G008260Carg14226Silver-seed gourdcarcmaB1288
CmaCh04G008260Carg05826Silver-seed gourdcarcmaB1414
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G008260CmaCh16G007110Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G008260Wax gourdcmawgoB0883
CmaCh04G008260Cucurbita maxima (Rimu)cmacmaB546
CmaCh04G008260Cucurbita moschata (Rifu)cmacmoB727
CmaCh04G008260Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G008260Wild cucumber (PI 183967)cmacpiB785
CmaCh04G008260Melon (DHL92) v3.5.1cmameB698
CmaCh04G008260Melon (DHL92) v3.5.1cmameB710
CmaCh04G008260Watermelon (Charleston Gray)cmawcgB639
CmaCh04G008260Watermelon (97103) v1cmawmB654
CmaCh04G008260Watermelon (97103) v1cmawmB715
CmaCh04G008260Cucurbita pepo (Zucchini)cmacpeB702
CmaCh04G008260Cucurbita pepo (Zucchini)cmacpeB741
CmaCh04G008260Bottle gourd (USVL1VR-Ls)cmalsiB639
CmaCh04G008260Melon (DHL92) v3.6.1cmamedB788
CmaCh04G008260Melon (DHL92) v3.6.1cmamedB804
CmaCh04G008260Cucumber (Chinese Long) v3cmacucB0917
CmaCh04G008260Watermelon (97103) v2cmawmbB712