CU102192 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU102192
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAT4g39900/T5J17_70
LocationChr4 : 6262194 .. 6263395 (-)
Sequence length418
The following sequences are available for this feature:

transcribed_cluster sequence

TGATATGCCAAACATTAGGTGGAGGAAATATAGATGTTTTGCACTTGACTCAAGAAAGATTGTTATTCTCTTCTCGGTATTGTCAAGCTTGGGAACCTTGATGTTGATATATTTGACTCTGAGAGTTAGGCAGCAGGGTGGAGATGGATCTGTTGCTATATAATTATAGTTTTTGGTCTCTGGTTTTGTCTAATTTTCTCCATTCTCTCTTAAAATAGTTGATTTTTAAATCTTAATCTCTTTATAGAACATTTTTTTAGGCATGACTATTTATGTTTGTACATAAATGTCTTCTACTTGTGATTATGAACGCTCTAGAAATTAGTGAACTTGTGATATTCGGATGAATCCTTGATGGAAATGTTAGCAGATTTTGAGTTTTATAAGATTATTGATCAAATTATTTTAGTTTCACATT
BLAST of CU102192 vs. TrEMBL
Match: A0A0A0KVQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095580 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-20
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 2

Query: 2   DMPNIRWRKYRCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 61
           DMPNIRWRKY+CFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI
Sbjct: 107 DMPNIRWRKYKCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 159

Query: 62  121
           
Sbjct: 167 159

Query: 122 161
           
Sbjct: 227 159

BLAST of CU102192 vs. TrEMBL
Match: A0A067LED3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24035 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-09
Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 2

Query: 2   DMPNIRWRKY-RCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 61
           D+PN RWRKY R    DSRKIV+LFS+LSSLGTL+LIYLTLRVRQ   DG V +
Sbjct: 205 DIPNNRWRKYKRAAPFDSRKIVLLFSILSSLGTLILIYLTLRVRQT-ADGFVNV 257

Query: 62  121
           
Sbjct: 265 257

Query: 122 161
           
Sbjct: 325 257

BLAST of CU102192 vs. TrEMBL
Match: A0A087GL08_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G277700 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-09
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 2

Query: 2   DMPNIRWRKY-RCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGS 61
           D P  RWR+Y R  + DSRKIVILFS+LSS+GTL+LIYLTLRVRQ G + S
Sbjct: 187 DPPTNRWRRYKRAASFDSRKIVILFSILSSVGTLILIYLTLRVRQNGDNNS 237

Query: 62  121
           
Sbjct: 247 237

Query: 122 152
           
Sbjct: 307 237

BLAST of CU102192 vs. TrEMBL
Match: A0A087GL07_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G277700 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-09
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 2

Query: 2   DMPNIRWRKY-RCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGS 61
           D P  RWR+Y R  + DSRKIVILFS+LSS+GTL+LIYLTLRVRQ G + S
Sbjct: 186 DPPTNRWRRYKRAASFDSRKIVILFSILSSVGTLILIYLTLRVRQNGDNNS 236

Query: 62  121
           
Sbjct: 246 236

Query: 122 152
           
Sbjct: 306 236

BLAST of CU102192 vs. TrEMBL
Match: V4P1N3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026058mg PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 2

Query: 2   DMPNIRWRKY-RCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQG 61
           D+P  RWR+Y R  + DSRKIVILFS+LSS+GTL+LIYLTLRVRQ G
Sbjct: 196 DVPTNRWRRYKRAASFDSRKIVILFSILSSVGTLILIYLTLRVRQNG 242

Query: 62  121
           
Sbjct: 256 242

Query: 122 140
           
Sbjct: 316 242

BLAST of CU102192 vs. NCBI nr
Match: gi|700198490|gb|KGN53648.1| (hypothetical protein Csa_4G095580 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-20
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 2

Query: 2   DMPNIRWRKYRCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 61
           DMPNIRWRKY+CFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI
Sbjct: 107 DMPNIRWRKYKCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 159

Query: 62  121
           
Sbjct: 167 159

Query: 122 161
           
Sbjct: 227 159

BLAST of CU102192 vs. NCBI nr
Match: gi|778691787|ref|XP_011653351.1| (PREDICTED: uncharacterized protein LOC101221126 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-20
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 2

Query: 2   DMPNIRWRKYRCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 61
           DMPNIRWRKY+CFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI
Sbjct: 152 DMPNIRWRKYKCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSVAI 204

Query: 62  121
           
Sbjct: 212 204

Query: 122 161
           
Sbjct: 272 204

BLAST of CU102192 vs. NCBI nr
Match: gi|659111140|ref|XP_008455600.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X2 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 2

Query: 2   DMPNIRWRKYRCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSV 61
           D PNIRWRKYRC ALDSRKIVILFSVLSSLGTL+LIYLTLRVRQQGGDGS+
Sbjct: 150 DTPNIRWRKYRCVALDSRKIVILFSVLSSLGTLILIYLTLRVRQQGGDGSI 200

Query: 62  121
           
Sbjct: 210 200

Query: 122 155
           
Sbjct: 270 200

BLAST of CU102192 vs. NCBI nr
Match: gi|659111138|ref|XP_008455598.1| (PREDICTED: uncharacterized protein LOC103495734 isoform X1 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 2

Query: 2   DMPNIRWRKYRCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGDGSV 61
           D PNIRWRKYRC ALDSRKIVILFSVLSSLGTL+LIYLTLRVRQQGGDGS+
Sbjct: 160 DTPNIRWRKYRCVALDSRKIVILFSVLSSLGTLILIYLTLRVRQQGGDGSI 210

Query: 62  121
           
Sbjct: 220 210

Query: 122 155
           
Sbjct: 280 210

BLAST of CU102192 vs. NCBI nr
Match: gi|729314866|ref|XP_010531374.1| (PREDICTED: uncharacterized protein LOC104807691 [Tarenaya hassleriana])

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-09
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 2

Query: 2   DMPNIRWRKY-RCFALDSRKIVILFSVLSSLGTLMLIYLTLRVRQQGGD 61
           D P  RWRKY R  + DSRK+VILFS+LSS+GTL+LIYLTLRV+QQ GD
Sbjct: 193 DAPTNRWRKYKRAASFDSRKVVILFSLLSSVGTLILIYLTLRVKQQNGD 241

Query: 62  121
           
Sbjct: 253 241

Query: 122 146
           
Sbjct: 313 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KVQ5_CUCSA3.1e-2098.11Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095580 PE=4 SV=1[more]
A0A067LED3_JATCU4.1e-0970.37Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24035 PE=4 SV=1[more]
A0A087GL08_ARAAL9.2e-0968.63Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G277700 PE=4 SV=1[more]
A0A087GL07_ARAAL9.2e-0968.63Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G277700 PE=4 SV=1[more]
V4P1N3_EUTSA1.2e-0872.34Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026058mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700198490|gb|KGN53648.1|3.4e-2098.11hypothetical protein Csa_4G095580 [Cucumis sativus][more]
gi|778691787|ref|XP_011653351.1|3.4e-2098.11PREDICTED: uncharacterized protein LOC101221126 [Cucumis sativus][more]
gi|659111140|ref|XP_008455600.1|1.2e-1792.16PREDICTED: uncharacterized protein LOC103495734 isoform X2 [Cucumis melo][more]
gi|659111138|ref|XP_008455598.1|1.2e-1792.16PREDICTED: uncharacterized protein LOC103495734 isoform X1 [Cucumis melo][more]
gi|729314866|ref|XP_010531374.1|2.7e-0971.43PREDICTED: uncharacterized protein LOC104807691 [Tarenaya hassleriana][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G095580Csa4G095580gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K6U7VFKNP3UI02K6U7VEST
FKNP3UI02NWFIDFKNP3UI02NWFIDEST
FKNP3UI02OF11WFKNP3UI02OF11WEST
G0125894G0125894EST
G0178900G0178900EST
H0153358H0153358EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34064FAMILY NOT NAMEDcoord: 2..47
score: 3.5
NoneNo IPR availablePANTHERPTHR34064:SF5SUBFAMILY NOT NAMEDcoord: 2..47
score: 3.5