Csa4G089280 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G089280
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 5838208 .. 5840652 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAATAGTCTCTCTTTCCTGGCTTCATTTTGTTCCACTTTTGAACTTTAGGGTTCTCTGATGTGTTTGATTACAACCCTTTTTTGTTACGATTTCGTAATTGAATTTCATTGTTTTGTTTGATTTTTCAGGCATCTCTGCTAATTGTTTTGTGTTAACTGTTCGCTGGAATCGTCTTTGAAGTTTAGACGCGTTTGATAACTGTCCGCTGGAGTCGTCTTTGAAGTTTAGACGCGTTTGATCACGTAATTTGTTCATGACTTCGAGGTACCTGAATTTGGTTTGAGAGTGATTTCTCTCTATCTCTTTTTGTTTTCAGTTTATTGTTGCGGTTTTTTCTTTTTATCGTTGGATTGGTGGGTGCCATTGAAGATTTTAGAAGAATTTCGTGAAGCCTTGCAATATAGATTTATCAAACTGGGCTGAAATATTAGTCTTATTTGAAATTTTTCTACTGCGATTATTTGCATCTTTTATCCTTTTGATTGCTTAGTTCATATTTGTGGTGGTTTATGTTAGAATTTGTATATATGGAAAAAATATTTATGGAAAACTTACCATAAATATTTCTTTTCCTTTTCTTCTTTGCTCTTTACATTCTATTTAAGCATCTTTTATCCTTTTGATTGCTTAGTTCATATTTTCAGGTAAGCCTTGTTTCCTGTTTATTGCTTTCAATAGCTTATATTCGCTTGGATGTTTGGATTCTGGATGTTAGAGCAGTGGTTGGATGAATTACAATAAACAACAATTTCCTTATGATACATTGACCCAAGTAAAGTCATGTTTTTTTTTTTTGTTTGGGATCATGGTTACTTATTCATGTCAGTGAAAGACTTTGTCTAAGAAATCGTATAGTAGTTGGTCATAGAAAGACTAGATCCATAGGTTGTACATCTGTATCACTGTCTTGATACTTGCTGTAGAGAGCATGTCTGGCCAATGCCAATGCTTAGTATTTACGATCAAAGATGATTTTTGCAGTTTCTTATGAGGCTGGTGGCTTCTTGGTATCAGTAGATGCCGTTTTTAATCTGATATCTAGTTTAGGCTTTGAGAGATAGAATTCTTATTCTTCTCTTTTTACTGCATTTTTGGTATAATGGTATTGATTTGAAGTTCTGAAAAGACAGGTTGTTACTGTTAGAAATGAGGATTCTGTCTCTGCGCCTAGTTGTTGAAATAGACTTATTTGTTTCTATGTTAGAAGACCACGAAGATTGAATGTATCTACTCCATCCTAGTTCATGGTTTCCTTTCTACCATCTTGTTCTCTATTTCTTACAGTGATAAGAAATTTGGTTGATCATCCTCTTTGCCCTTGTTTCCCTCTCTTCTGCTTTATTCAATTTAGTTTTCTTTTGTTCTCTTTCTGATTTGCCAGAAAAGTACGCATTATTTCTTTATTTTACAATACATTCTTTGTGGTTGAGCCTGATCTCTACGTATCTGAATTCTTCCTTGGTTTCTCTTTTGTTTCATCTCTTGCTCTTTACCATTCCTAGCAGCAGTTGGAGGAGATCATTAGGGAATGTCAGGTCCTTCATCGGCAATTCGATGGGCGGTCTCAGGGGTGGTGCCAATCTCGCTTCTTGGGTTGTGGCTGGAACGCTCGCTTACTACCTCTGGGTCAAGCCTTCCCAAGACCTCAAACGGGAACAGCAGGAAAGGGCTGCTCTTGCAGCTGTGGATCCTCATCGGTATATTGAGAAGAGAAAACCTATTCCTGATCCCCAGGAAACTGGTTTGATATATGGCAACAAGAATACACCTCGAAAACCCGAGGAATGAGCTACATGAGTGAAATCTTTGGAGAAATGTAACGGCTTAAGCTTTTCACTGATCAAAGGTGAAGAAGGGGGTCAGAAATTATAATCTAGGTAGGAGCTAGAGCCTAAAACAGAGAAGATTAGAAGTTGATACATGAACAAAACTGTTGTTCAGTAAAGAGGTGTGGCCAAGTGATTTGGAATTTTGGATCCTTTTAATGGAACCCTTAGTTGAAGATTGAAAAAGTTGTGTATTTTGCGTTTGGCACTGATGAACAATTGAATTGTCTACCATAGATTTATATTTCTAATTTTCTAAAAAGATTGTCTACCATGAGAATTTGGATATTACTTTAAGAATTCAAACTTAAAATTTGTGTTTCTATCAGTCAATATATACGGTGAAAAAAGGATTGATTAAAATCAGTAGAGTTTTGGTTCTTTCATATGTTATTGGGACCATTTTGATTGGGTGAGAGCATTAACGAAAGTTGATCAACCTTT

mRNA sequence

ATGACTTCGAGCAGTTGGAGGAGATCATTAGGGAATGTCAGGTCCTTCATCGGCAATTCGATGGGCGGTCTCAGGGGTGGTGCCAATCTCGCTTCTTGGGTTGTGGCTGGAACGCTCGCTTACTACCTCTGGGTCAAGCCTTCCCAAGACCTCAAACGGGAACAGCAGGAAAGGGCTGCTCTTGCAGCTGTGGATCCTCATCGGTATATTGAGAAGAGAAAACCTATTCCTGATCCCCAGGAAACTGGTTTGATATATGGCAACAAGAATACACCTCGAAAACCCGAGGAATGA

Coding sequence (CDS)

ATGACTTCGAGCAGTTGGAGGAGATCATTAGGGAATGTCAGGTCCTTCATCGGCAATTCGATGGGCGGTCTCAGGGGTGGTGCCAATCTCGCTTCTTGGGTTGTGGCTGGAACGCTCGCTTACTACCTCTGGGTCAAGCCTTCCCAAGACCTCAAACGGGAACAGCAGGAAAGGGCTGCTCTTGCAGCTGTGGATCCTCATCGGTATATTGAGAAGAGAAAACCTATTCCTGATCCCCAGGAAACTGGTTTGATATATGGCAACAAGAATACACCTCGAAAACCCGAGGAATGA

Protein sequence

MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE*
Homology
[Close]
BLAST of Csa4G089280 vs. TrEMBL
Match: A0A0A0KZ01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA 60
          MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA
Sbjct: 1  MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA 60

Query: 61 LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE
Sbjct: 61 LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

[Close]
BLAST of Csa4G089280 vs. TrEMBL
Match: A0A067KP46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-42
Identity = 84/95 (88.42%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62
          SS+WRR+LGNVRSFIGNSMGGLRGG+NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 2  SSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61

Query: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          A DP+RY+EKRKPIPDPQETGLIYGNKN  +KP E
Sbjct: 62 AADPYRYVEKRKPIPDPQETGLIYGNKNKTKKPVE 96

[Close]
BLAST of Csa4G089280 vs. TrEMBL
Match: V4TG86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42
Identity = 82/95 (86.32%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62
          +SSWRR++GN+RSF+GNSMGG+RGGANLASWVVAGTLAYYLWVKPSQDLKREQ+ERAALA
Sbjct: 2  ASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALA 61

Query: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          A+DP+RY+EKRKPIPDPQETGLIYGNKN  RK EE
Sbjct: 62 ALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

[Close]
BLAST of Csa4G089280 vs. TrEMBL
Match: A0A067H099_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42
Identity = 82/95 (86.32%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62
          +SSWRR++GN+RSF+GNSMGG+RGGANLASWVVAGTLAYYLWVKPSQDLKREQ+ERAALA
Sbjct: 2  ASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAALA 61

Query: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          A+DP+RY+EKRKPIPDPQETGLIYGNKN  RK EE
Sbjct: 62 ALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

[Close]
BLAST of Csa4G089280 vs. TrEMBL
Match: M5XGC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013926mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42
Identity = 81/95 (85.26%), Postives = 90/95 (94.74%), Query Frame = 1 

Query: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62
          +++WRR LGNVRSF+GNSMGGLRGG+NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 2  TTTWRRRLGNVRSFVGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61

Query: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          + DPH Y+EKRKP+PDPQETGLIYGNKN  RKPEE
Sbjct: 62 SADPHAYVEKRKPVPDPQETGLIYGNKNRTRKPEE 96

[Close]
BLAST of Csa4G089280 vs. TAIR10
Match: AT2G33585.1 (AT2G33585.1 unknown protein)

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-37
Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 3   SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62
           +SSWRRS+GNVRSFIGNSMGGLRGG + ASWVVAGT+AY+LW+KP QDLK+EQ+ RAALA
Sbjct: 99  ASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAALA 158

Query: 63  AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
             D ++Y+EKRKPI DPQ TGLIYGNKN   K E+
Sbjct: 159 MADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 193

[Close]
BLAST of Csa4G089280 vs. NCBI nr
Match: gi|449438867|ref|XP_004137209.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 4.1e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA 60
          MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA
Sbjct: 1  MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA 60

Query: 61 LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE
Sbjct: 61 LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

[Close]
BLAST of Csa4G089280 vs. NCBI nr
Match: gi|659101596|ref|XP_008451690.1| (PREDICTED: uncharacterized protein LOC103492913 isoform X2 [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 3.5e-48
Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 1 

Query: 1  MTSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA 60
          MTSSSWRRS GNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA
Sbjct: 1  MTSSSWRRSFGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAA 60

Query: 61 LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTP+KPEE
Sbjct: 61 LAAVDPHRYIEKRKPIPDPQETGLIYGNKNTPQKPEE 97

[Close]
BLAST of Csa4G089280 vs. NCBI nr
Match: gi|778691650|ref|XP_011653320.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-48
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 2  TSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 61
          +SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL
Sbjct: 3  SSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 62

Query: 62 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE
Sbjct: 63 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98

[Close]
BLAST of Csa4G089280 vs. NCBI nr
Match: gi|778691658|ref|XP_011653322.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X3 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62
          +SSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA
Sbjct: 2  TSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 61

Query: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE
Sbjct: 62 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 96

[Close]
BLAST of Csa4G089280 vs. NCBI nr
Match: gi|659101588|ref|XP_008451686.1| (PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 3.9e-47
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 1 

Query: 2  TSSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 61
          +SSSWRRS GNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL
Sbjct: 3  SSSSWRRSFGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 62

Query: 62 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98
          AAVDPHRYIEKRKPIPDPQETGLIYGNKNTP+KPEE
Sbjct: 63 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPQKPEE 98

The following BLAST results are available for this feature:
BLAST of Csa4G089280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ01_CUCSA2.9e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1[more]
A0A067KP46_JATCU1.5e-4288.42Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1[more]
V4TG86_9ROSI3.4e-4286.32Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1[more]
A0A067H099_CITSI3.4e-4286.32Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1[more]
M5XGC1_PRUPE3.4e-4285.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013926mg PE=4 SV=1[more]
BLAST of Csa4G089280 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33585.11.7e-3773.68 unknown protein[more]
BLAST of Csa4G089280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438867|ref|XP_004137209.1|4.1e-49100.00PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus][more]
gi|659101596|ref|XP_008451690.1|3.5e-4897.94PREDICTED: uncharacterized protein LOC103492913 isoform X2 [Cucumis melo][more]
gi|778691650|ref|XP_011653320.1|4.6e-4898.96PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus][more]
gi|778691658|ref|XP_011653322.1|1.3e-4798.95PREDICTED: uncharacterized protein LOC101205325 isoform X3 [Cucumis sativus][more]
gi|659101588|ref|XP_008451686.1|3.9e-4796.88PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095850cucumber EST collection version 3.0transcribed_cluster
CU126711cucumber EST collection version 3.0transcribed_cluster
CU144313cucumber EST collection version 3.0transcribed_cluster
CU169854cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G089280.2Csa4G089280.2mRNA
Csa4G089280.1Csa4G089280.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU169854CU169854transcribed_cluster
CU126711CU126711transcribed_cluster
CU144313CU144313transcribed_cluster
CU095850CU095850transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37213FAMILY NOT NAMEDcoord: 1..97
score: 5.1
NoneNo IPR availablePANTHERPTHR37213:SF1SUBFAMILY NOT NAMEDcoord: 1..97
score: 5.1