CmoCh04G005950 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G005950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSubtilisin-like protease 3
LocationCmo_Chr04 : 2966852 .. 2969577 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGCTCTTCCGTTCCCTTTCGTGCTTCAATTTATCATCCTGATTTTGATTCTTAACAGCGCCTGCCAGCTACTTCTTATCTTGATTATTCTTCTGAATTTGAGCTTTAGGGTTCTTTCCCATCGGTAATTTAATGAATTTTGTTGATCTTCAATGTTTGATTGGGCCCCGGCCCCTTTTTGGGTGCGATTGTGGTGATGAAACTCAGTTTTTTGTTCGAGTTTTTTCAGGATTCACTGATATTTGTCCTGCTCTTTCATCGGCTGTAATCGTCTTTGATGTATTGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGGTACCTGATTTTGGTTTCAGAGTCCTTTTCTTTATCTCTGTTTAGATTTTCTTGCGAATTGGTTTTTTCTTGTTGGATTGGTGTGAGCCGTTGAGGATTAGTGGAGAAATTCGTGAATATTTTCGATCTAGATTTTAAGAATGGACTGGTTTTTATTTGAGTCTCACTTAAGGTGTATCTGCTATGATGCTTTGAATCTTTTGTGGTTTTGATTGCTTAGAAATTCTCGTATGTGGTGGTTTATATTCTCTTGGATGGTAGAATTTTGGAATGAATGACGATGTGCAACGTTTTCTTTATGAAAAGGCAGGTTAATAGAAGAGAAATCTCAGATTTACTGAACAAAATACCTGGACCCTAGTAAAGTTCTGCCTTAGATTTCTTGTTTTGGATCATGATCCCTTATTGATCGCAGTGAATCCGGCCTCATATCCTAGTTAGCGGCGCATTCATCATAGTTAGAAGCTCCAACTCCATATCAAGGTCACGGTCGATATCAACACTATCATAAATATCGTCACTATCATCAATAAGAAAACCCTTAGGGTTGTTATCCGGGAACTTGTTCAGAAATACTATAATGAAAGGAAGATAGAAGTTTGTCGCTAGGTATTTGACCAAATAGGATCGTGCTTATAGGATCATAGAATACATGGCTGTGCAGGGAACGTCTATGCTATTATATTCTCTGCAGGATTTTGAATGGTTGTCTAAGTTAATGCTTATGCTTAGTTGGTTAGCTTAGAATTTAAAATCAAAGATTAACTCTGGTGTTTCTTAAGTAGCTGGTGGTTACTTGGTATCAGTAGACGTGGGTACCCATACGTCGACATCAGATGAGTACATCTTTCAATTATGGCTTCTTAATCCGATGTCTAATTCAGGCTCTGAGGGGTGTTTAGTAAGAGGAGATGTTTATTTCTTCAAATGGTTTCTGTTTCAAATAAACATAGACAACTGATAGCAATGGTATTAGGTTGGTTATGGATGTTATTAGAGTGTTTGGGTTATTGGCTCGAGGAGTTCGTTAGTAGGAGTCGATTTGGGCGAAGAGAAAGCTCGACAATTGCTTTGATGGTTTTGGCTGAGTGTGTATACTCAAAAGAGGGGAGGATCCAAACTCCAAGTACCTCAAATACTTGGATTATATTGTAGCTCTTCTATCTATTTTATTTCAATATTGTTCTAGTTGACTGGGTTCTATGAACATCAAAGCTACCTACTCCTTGTCAGTTTATAGTTTTCTCTCTACCATCTATGTGAAATCCCACGTCCGTTAGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACTTTTCCCTATCAGATGCGTTTTAAAAACCTTGAGAGGAAGTCCGAAAGGGAAAGCCCAAAGAGGGACAATATCTACTAGCGAGCTATTACAAATGGCATCAGAGCCAGACACTGGACGATGTGTCAGCGAGCAGGTAGAGCCCCGAAGGGGGGTGGACACAAGGCGGTGTGCCAGCAAGGATGCTAGGCCCCGAAAGGGGGTGGATTGGGGGCCCCACATCGATTGGAGAAGGGCGTGATTGCCAGCGAAGGCGCTGGGCACCGTATTGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTTCCTAGCAAACGCGTTTTAAAAACCTTGAGGAGAAACTCGAAAGGGAAAGTCCAAAGAGAACAATATATGCTAGCGTTGGGCTTGAGCCGTTATAATCTTGTTCTCTACTTTTTCCACTGATAAGAAAGTTAGTACATTATCCTCTTAATTTGTCCTTAGTACATCGTCTTCTTAATTTGTCCTTGTTATTTTCATCTGTCTAAATTGCTGTCCGTAAGTTCATTTTCGTTTTGTTTTCTGGTTCGCCGGACTTTCTTTATTTTATAAAACGTTCTTTTCGGTTTAGCCTTTATATTTGATCTCTACATTCCCATTACAAATGATACAAGTATTTGCCCAGTTATATCTGTCGAATTCTACTGATTTTTGGTACATTTTCCATCGTACATTGAAACATAGTTCGTCTTCTGAATTCTTCCTCGGTTTCTATTTTGTCTGGTTTCTTTCCTTACAATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAAAATCAGAGGAGTAA

mRNA sequence

TCGGCTCTTCCGTTCCCTTTCGTGCTTCAATTTATCATCCTGATTTTGATTCTTAACAGCGCCTGCCAGCTACTTCTTATCTTGATTATTCTTCTGAATTTGAGCTTTAGGGTTCTTTCCCATCGTTTTTTGTTCGAGTTTTTTCAGGATTCACTGATATTTGTCCTGCTCTTTCATCGGCTGTAATCGTCTTTGATGTATTGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAAAATCAGAGGAGTAA

Coding sequence (CDS)

ATGACTTCAAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAAAATCAGAGGAGTAA
BLAST of CmoCh04G005950 vs. TrEMBL
Match: A0A067KP46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.7e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S+WRRT+GNVRSFIGNSMGGLRGG+NLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MSSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          AA DPYRY+EKRKPIPDPQETGLIYGNKNK KK  E
Sbjct: 61 AAADPYRYVEKRKPIPDPQETGLIYGNKNKTKKPVE 96

BLAST of CmoCh04G005950 vs. TrEMBL
Match: A0A0A0KZ01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.7e-42
Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1

Query: 2  TSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+K EE
Sbjct: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

BLAST of CmoCh04G005950 vs. TrEMBL
Match: V4TG86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-41
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRRT+GN+RSF+GNSMGG+RGG NLASWVVAGTLAY+LWVKPSQDLKREQ+ERAAL
Sbjct: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          AA DP RY+EKRKPIPDPQETGLIYGNKN+ +KSEE
Sbjct: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

BLAST of CmoCh04G005950 vs. TrEMBL
Match: A0A067H099_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-41
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRRT+GN+RSF+GNSMGG+RGG NLASWVVAGTLAY+LWVKPSQDLKREQ+ERAAL
Sbjct: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          AA DP RY+EKRKPIPDPQETGLIYGNKN+ +KSEE
Sbjct: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

BLAST of CmoCh04G005950 vs. TrEMBL
Match: B9H5W7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27840g PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.2e-41
Identity = 80/96 (83.33%), Postives = 92/96 (95.83%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S WRRTVGNVRSFIGNS+GGLRGG+N+ASW+VAGTLAY+LW+KPSQDLKR+Q+ERAAL
Sbjct: 1  MSSGWRRTVGNVRSFIGNSLGGLRGGSNVASWIVAGTLAYYLWIKPSQDLKRQQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          A++DPYRYIEKRKPIPDPQETGLIYG KN+  KSEE
Sbjct: 61 ASSDPYRYIEKRKPIPDPQETGLIYGKKNRTNKSEE 96

BLAST of CmoCh04G005950 vs. TAIR10
Match: AT2G33585.1 (AT2G33585.1 unknown protein)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-37
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 1

Query: 1   MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
           M SSWRR++GNVRSFIGNSMGGLRGG + ASWVVAGT+AYFLW+KP QDLK+EQ+ RAAL
Sbjct: 98  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 157

Query: 61  AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
           A  D  +Y+EKRKPI DPQ TGLIYGNKN   KSE+
Sbjct: 158 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 193

BLAST of CmoCh04G005950 vs. NCBI nr
Match: gi|778691658|ref|XP_011653322.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X3 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 7.4e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MTSSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          AA DP+RYIEKRKPIPDPQETGLIYGNKN P+K EE
Sbjct: 61 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 96

BLAST of CmoCh04G005950 vs. NCBI nr
Match: gi|802604326|ref|XP_012073563.1| (PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas])

HSP 1 Score: 181.0 bits (458), Expect = 9.7e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S+WRRT+GNVRSFIGNSMGGLRGG+NLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MSSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          AA DPYRY+EKRKPIPDPQETGLIYGNKNK KK  E
Sbjct: 61 AAADPYRYVEKRKPIPDPQETGLIYGNKNKTKKPVE 96

BLAST of CmoCh04G005950 vs. NCBI nr
Match: gi|659101598|ref|XP_008451691.1| (PREDICTED: uncharacterized protein LOC103492913 isoform X3 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 1

Query: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MTSSWRR+ GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRSFGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          AA DP+RYIEKRKPIPDPQETGLIYGNKN P+K EE
Sbjct: 61 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPQKPEE 96

BLAST of CmoCh04G005950 vs. NCBI nr
Match: gi|449438867|ref|XP_004137209.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 8.2e-42
Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1

Query: 2  TSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+K EE
Sbjct: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

BLAST of CmoCh04G005950 vs. NCBI nr
Match: gi|778691650|ref|XP_011653320.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 8.2e-42
Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1

Query: 2  TSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 4  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 63

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 97
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+K EE
Sbjct: 64 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A067KP46_JATCU6.7e-4390.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1[more]
A0A0A0KZ01_CUCSA5.7e-4289.47Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1[more]
V4TG86_9ROSI2.8e-4185.42Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1[more]
A0A067H099_CITSI2.8e-4185.42Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1[more]
B9H5W7_POPTR8.2e-4183.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27840g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G33585.12.2e-3775.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778691658|ref|XP_011653322.1|7.4e-4390.63PREDICTED: uncharacterized protein LOC101205325 isoform X3 [Cucumis sativus][more]
gi|802604326|ref|XP_012073563.1|9.7e-4390.63PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas][more]
gi|659101598|ref|XP_008451691.1|1.6e-4290.63PREDICTED: uncharacterized protein LOC103492913 isoform X3 [Cucumis melo][more]
gi|449438867|ref|XP_004137209.1|8.2e-4289.47PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus][more]
gi|778691650|ref|XP_011653320.1|8.2e-4289.47PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G005950.1CmoCh04G005950.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37213FAMILY NOT NAMEDcoord: 1..96
score: 2.1